BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: halleri_transcript_ahg.fa
           32,672 sequences; 38,939,717 total letters



Query= AT3G14090.1

Length=2238
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Ahg478822 jgi|Araly1|478822|fgenesh2_kg.3__1523__AT3G14090.1        2217    0.0  
  Ahg474539 jgi|Araly1|474539|fgenesh2_kg.1__4493__AT1G54090.1        1053    0.0  


> Ahg478822 jgi|Araly1|478822|fgenesh2_kg.3__1523__AT3G14090.1
Length=2161

 Score = 2217 bits (1200),  Expect = 0.0
 Identities = 1341/1409 (95%), Gaps = 10/1409 (1%)
 Strand=Plus/Plus

Query  832   ATCAGGAAATGGATTCGTGCTGCTAAAGTTTGCATTAGAGTTGTTTTCTCTAGTGAGAAG  891
             |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct  761   ATCAGGAAATGGATTCGTGCAGCTAAAGTTTGCATTAGAGTTGTTTTCTCTAGTGAGAAG  820

Query  892   AGACTATGTGAGCAGCTCTTTGATGGTATTTGCACTGCCATGGATGAGACTTGTTTCATG  951
             ||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||
Sbjct  821   AGACTATGTGAGCAGCTATTTGATGGTATTTGCACGGCTATGGATGAGACTTGTTTCATG  880

Query  952   GAGACAGTGAAGGCTTCTGCTCTGAGACTTTTCACTTTCCCTGAAGCTATAAGTATCAGT  1011
             |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct  881   GAGACAGTGAAGGCCTCTGCTCTGCGACTTTTCACTTTCCCTGAAGCTATAAGTATCAGT  940

Query  1012  AGAAGATCACCTGAGAAGCTGTTCAAGATTCTTGATTTACATGATGCTTTAACGGATATG  1071
             |||||||||||||||||||| |||||||||||||||||||| |||||||| || ||||||
Sbjct  941   AGAAGATCACCTGAGAAGCTTTTCAAGATTCTTGATTTACACGATGCTTTGACCGATATG  1000

Query  1072  TTGCCGGATATTGAAGCAATCTTTGACTCAGATTCATCAGATGCTATTAGAGCTCAGGCT  1131
             || |||||||||||||||||||||||||| ||||| |||||||||||||| |||||||| 
Sbjct  1001  TTACCGGATATTGAAGCAATCTTTGACTCGGATTCTTCAGATGCTATTAGGGCTCAGGCC  1060

Query  1132  GTTGAGATTCAATCGAGGTTAGCGGAAGCAGCGAGAGGTATACTTTCGGAGTTTGAGAAT  1191
             |||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||
Sbjct  1061  GTTGAGATTCAATCGAGACTAGCGGAAGCAGCGAGAGGTATACTTTCGGAATTTGAGAAT  1120

Query  1192  GCGGTTCTTCGCGAACCTTCGATAGTTCCTGTCCCTGGAGGAACGATTCATCCATTGACA  1251
             || |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1121  GCTGTTCTTCATGAACCTTCGATAGTTCCTGTCCCTGGAGGAACGATTCATCCATTGACA  1180

Query  1252  AGGTATGTGATGAACTACATTGTTATGATCTCTGATTATAAGCAAACGTTGGATGATCTC  1311
             |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||
Sbjct  1181  AGGTATGTGATGAACTACATTGTTATGATCTCTGATTATAAGCAAACACTGGATGATCTC  1240

Query  1312  ATCATGTCGAATCCCTCTACTGGTTCTGATCCAAACACACCGGATATGGATTTCACGGAG  1371
             |||||||||||||| || | ||| ||||||||||||||||| ||||||||||||||||||
Sbjct  1241  ATCATGTCGAATCCTTCAAGTGGGTCTGATCCAAACACACCAGATATGGATTTCACGGAG  1300

Query  1372  TTGGATAGTAAATCTCCGTTGGATTTGCATTTGATATGGTTGATTGTGGTCTTGCATTTC  1431
              | || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct  1301  CTAGAGAGTAAATCTCCATTGGATTTGCATTTGATATGGTTGATTGTGGTCTTGCATTTC  1360

Query  1432  AACTTAGAAGAGAAATCCAAGCACTATAGAGACACATCTCTAGCTCACATATTCATCATG  1491
             |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct  1361  AACTTAGAAGAGAAATCCAAGCACTATAGAGACACATCTCTATCTCACATATTCATAATG  1420

Query  1492  AACAACATCCATTACATTGTTCAGAAAGTGAAAAGGTCACCAGAACTACGAGAGATGATT  1551
             ||||||||||||||||||||||||||||||||||||||||| || ||| |||| ||||||
Sbjct  1421  AACAACATCCATTACATTGTTCAGAAAGTGAAAAGGTCACCGGAGCTAAGAGAAATGATT  1480

Query  1552  GGAGACCATTATTTAAGGAAACTCACTGGGATATTTAGACATGCTGCCACAAACTACCAG  1611
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1481  GGAGACCATTATTTAAGGAAACTCACTGGGATATTTAGACATGCTGCCACAAACTACCAG  1540

Query  1612  AGAGCTACATGGGTCAGAGTACTGAATAGTTTGAGAGATGAAGGATTACATGTGAGTGGG  1671
             ||||| |||||||||||||||||||||||  |||||||||||||||||||||||| ||||
Sbjct  1541  AGAGCGACATGGGTCAGAGTACTGAATAGCCTGAGAGATGAAGGATTACATGTGACTGGG  1600

Query  1672  AGTTTCTCCTCAGGTGTATCAAGAAGTGCATTAAGAGAGAGGTTTAAGGCATTCAATACA  1731
             |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct  1601  AGTTTCTCCTCAGGTGTATCAAGAAGTGCACTAAGAGAAAGGTTTAAGGCATTCAATACA  1660

Query  1732  ATGTTCGAAGAGGTTCACAGGACTCAGTCCACATGGTCGGTTCCAGATGCTCAGCTTAGA  1791
             |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct  1661  ATGTTCGAAGAGGTTCACAGGATTCAGTCCACATGGTCGGTTCCAGATGCTCAGCTTAGA  1720

Query  1792  GAAGAACTCCGAATATCGCTATCCGAGCATCTAATCCCTGCTTATAGATCGTTTCTTGGA  1851
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1721  GAAGAACTCCGAATATCGCTATCCGAGCATCTAATCCCTGCTTATAGATCGTTTCTTGGA  1780

Query  1852  AGGTTCAGGGGTCATATAGAGAGTGGAAGACACCCTGAGAACTATTTGAAATATTCGGTT  1911
             ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct  1781  AGGTTCAGGGGTCATATAGAGAGCGGAAGACACCCTGAGAACTATTTGAAATATTCTGTT  1840

Query  1912  GAAGATATCGAGACCATCGTTCTAGATTTCTTCGAAGGATATACCACACCACCACACTTG  1971
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1841  GAAGATATCGAGACCATCGTTCTAGATTTCTTCGAAGGATATACCACACCACCACACTTG  1900

Query  1972  AGGAGGCGATAAAAGAAGATCGAAAACCCGAGAGTTCTATCTTCTTTCTTTCGTTTTTCA  2031
             |||||||||||||||||||| ||||| | ||||||||  ||||||||||||| |||||||
Sbjct  1901  AGGAGGCGATAAAAGAAGATGGAAAAACGGAGAGTTCG-TCTTCTTTCTTTCTTTTTTCA  1959

Query  2032  GTCACATTAGGATGTCATAGAAATAGAACCATTCTTTGAATTTTTATTCACGGGTTTCCT  2091
             | ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||
Sbjct  1960  GCCACATTAGGATGTCATAGAAATAGAGCCATTCTTTGAATTTTTATTCACGGGTT-CCT  2018

Query  2092  GCCCGGTGGAATAATCTCCAGGTGAACATAT-TT-GTGTGTTGTTGTTTGTGCCATATGT  2149
             ||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||
Sbjct  2019  GCCCGGTGGAATAATCTCCAGGTAAACATATATTTGTGTGTTGTTGTTTGTGCCATATGT  2078

Query  2150  CTTCTATTTATAAAAGTCCTGATTGATCACAGAACCAATAAGTACCATGTAAATTTTGCA  2209
             ||||| ||||     |||||||||||||||||||||||||||||||||||||||||||||
Sbjct  2079  CTTCT-TTTA-----GTCCTGATTGATCACAGAACCAATAAGTACCATGTAAATTTTGCA  2132

Query  2210  ATGTGCGACGTCCTCTACTCATTTGCTCC  2238
             |||||| ||||| ||||||| ||||||||
Sbjct  2133  ATGTGCCACGTCTTCTACTCTTTTGCTCC  2161


 Score = 1131 bits (612),  Expect = 0.0
 Identities = 726/777 (93%), Gaps = 23/777 (3%)
 Strand=Plus/Plus

Query  25   aaaaaaaaaaCCGAAGTGGTTTCTTACCAAAAAATCAACCAATCTCCTTCACGAATTTCC  84
            |||| ||||| ||||||||||||||||| ||||||    | |||||||||||| |||| |
Sbjct  1    AAAATAAAAATCGAAGTGGTTTCTTACC-AAAAAT----CGATCTCCTTCACGGATTTTC  55

Query  85   ATCTGAGAAGAATTTGAATCGGTGGAGATGGAACCGCCGGAGAATAGTTTAGATTCCGAT  144
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  56   ATCTGAGAAGAATTTGAATCGGTGGAGATGGAACCGCCGGAGAATAGTTTAGATTCCGAT  115

Query  145  GGTTCGAACTTAGAGACAGCGGAGAGGATAATACTCCGGTGGGACTCAGCAGCGACTGAT  204
            |||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct  116  GGTTCGAAGTTAGAGACGGCGGAGAGGATAATACTCCGGTGGGACTCAGCGGCGACTGAT  175

Query  205  GGAGCAAGAGGGAAGATGATTTTCCAAAGCGATCGTGATGAGGTGGATCGGTTTCTTCGA  264
            ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct  176  GGAGCTAGAGGGAAGATGATTTTCCAAAGCGATCGTGATGAGGTGGATCGGTTTCTCCGA  235

Query  265  GCCGTTGATGAAATCCAACGGTCCTTAtcttctgtctctttctcttcttcttcCTCCTCC  324
            |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct  236  GCCGTTGATGAAATCCAACGGTCCTTATCTTCTGTCTCCTTCTCTTCTTCTTCCTCCTCC  295

Query  325  GCCGCCACCTCCGCCGCCACCGTAGTCGATGAACACGAGGTCAAAGCCAACTCAGCTATT  384
            |||||||         ||| |  |||||||||||||||||||||||||||||||||||| 
Sbjct  296  GCCGCCA---------CCA-C--AGTCGATGAACACGAGGTCAAAGCCAACTCAGCTATC  343

Query  385  CAAATCGCTATGGCTAGACTCGAAGACGAGTTCCGTAACATTCTTCTCTCCCACACAACT  444
            |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct  344  CAAATCGCCATGGCTAGACTCGAAGATGAGTTCCGTAACATTCTTCTCTCCCACACAACT  403

Query  445  ACTTTCGAGCCTGATTCACTTTTCCTCGAGGAA-C--CATCAGTCTCTCCGTCTTTAACC  501
            ||||||||||||||||||||||| || |||||| |  ||||||||||||||||||||  |
Sbjct  404  ACTTTCGAGCCTGATTCACTTTTTCTTGAGGAATCATCATCAGTCTCTCCGTCTTTATGC  463

Query  502  GTCGAAGTTGGAGAAGAT---ACCACCGTAACTCCCGAAGAAGAAGAATTAAATTCTCCA  558
            ||||| ||||||||||||   |||||||||||| |||||||||||||||||||||| |||
Sbjct  464  GTCGAGGTTGGAGAAGATACCACCACCGTAACTACCGAAGAAGAAGAATTAAATTCGCCA  523

Query  559  GGTGGTTCCGGTTCAAGCCGGTTAACTCGTAGAAGAAGCAGTTACAGATCCACTAGCAGT  618
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  524  GGTGGTTCCGGTTCAAGCCGGTTAACTCGTAGAAGAAGCAGTTACAGATCCACTAGCAGT  583

Query  619  ATACGAGAAATGGATCTGATTTCGCCGGAAGCAGTTTCTGATCTAAGATCGATTGTTCAA  678
            |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct  584  ATACGAGAAATGGATCTGATCTCGCCGGAAGCAGTTTCTGATCTGAGATCGATTGTTCAA  643

Query  679  CGAATGGTCGCCGCCGGTTACTCTCGTGAATGTATCCAAGTCTATGGAACTGTTCGCAAA  738
            ||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||
Sbjct  644  CGAATGGTCGCCGCCGGTTACTCTCGTGAGTGTATCCAAGTATACGGAACTGTTCGCAAA  703

Query  739  TCAGCCATGGAAGCAATATTTAAGCAGCTTGGGATTGTGAAGATAAGCATTGGTGAT  795
            |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct  704  TCAGCCATGGAAACAATATTTAAGCAGCTTGGGATTGTGAAGATAAGCATTGGAGAT  760


> Ahg474539 jgi|Araly1|474539|fgenesh2_kg.1__4493__AT1G54090.1
Length=2259

 Score = 1053 bits (570),  Expect = 0.0
 Identities = 1171/1452 (81%), Gaps = 78/1452 (5%)
 Strand=Plus/Plus

Query  564   TTCCGGTTCAAGCCGGTTAACTCGTAGAAGAAGCAGT--TA-CAGATCCACTAGCAGTAT  620
             ||||||||| || |||||| |  | || ||||| |||  || || |||||| ||||||||
Sbjct  574   TTCCGGTTCGAGACGGTTATCGAGGAGTAGAAGGAGTAATAGCAAATCCACAAGCAGTAT  633

Query  621   ACGAGAAATGGATC-TGATTTCGCCGGAAGCAGTTTCTGATCTAAGATCGATTGTTCA-A  678
             |||||| || |||| || | ||||||||||| ||||||||||| |||||||||| ||| |
Sbjct  634   ACGAGAGATCGATCTTG-TATCGCCGGAAGCTGTTTCTGATCTGAGATCGATTGCTCAGA  692

Query  679   CGAATGGTCGCCGCCGGTTACTCTCGTGAATGTATCCAAGTCTATGG-AACTGTTCGCAA  737
              ||||| |||  || |||||||||||||||||| | || || || || ||| ||  | ||
Sbjct  693   -GAATGATCGGAGCTGGTTACTCTCGTGAATGTGTTCAGGTATACGGAAAC-GTGAGAAA  750

Query  738   ATCAGCCATGGAAGCAATATTTAAGCAGCTTGGGATTGTGAAGA-TAAGCATTGGTGATG  796
             ||| |||||||||   || ||||||||||| ||||||||||| | || | ||||| ||||
Sbjct  751   ATCCGCCATGGAAATGATTTTTAAGCAGCTAGGGATTGTGAA-ATTAGGGATTGGAGATG  809

Query  797   TTCAAAGGCTTGAGTGGGAAGTTGTTGAAG-GAAAGATCAGGAA-ATGGATTCGTGCTGC  854
             | || |||||||| ||||||| ||| |||| | ||||||| ||| |||||| ||||| ||
Sbjct  810   TGCAGAGGCTTGATTGGGAAGCTGTGGAAGTG-AAGATCA-GAAGATGGATCCGTGCGGC  867

Query  855   TAAAGTTTGCATTAGAGTTGTTTTCTCTAGTGAGAAGAGACTATGTGAGCAGCTCTTTGA  914
              || |||||| |||||||||||||| |||| ||||||||||| ||||| ||  | |||||
Sbjct  868   GAAGGTTTGCGTTAGAGTTGTTTTCGCTAGCGAGAAGAGACTCTGTGAACAAATATTTGA  927

Query  915   TGGTATTTGCACTGCCATGGATGAGACTTGTTTCATGGAGACAG-TGAAGGCTTCTGCTC  973
                 |   | |  |||||||| ||||| |||||||||||||  | | || || |||||| 
Sbjct  928   ----A---GGA--GCCATGGAAGAGACATGTTTCATGGAGATTGTTAAAAGC-TCTGCTT  977

Query  974   TG-AGACTTTTCACTTTCCCTGAAGCTATAAGTATCAGTAGAAGATCACCTGAGAAGCTG  1032
             || || ||||||| ||||||||||||||||||||| |||||||||||||||||||| || 
Sbjct  978   TGCAG-CTTTTCAATTTCCCTGAAGCTATAAGTATTAGTAGAAGATCACCTGAGAAACTA  1036

Query  1033  TTCAAGATTCTTGATTTACATGATGCTTTAACGGATATGTTGCCGGATATTGAAGCA-AT  1091
             |||||||||||||||||||||||||||||||| ||| ||||||| ||||| |||| | ||
Sbjct  1037  TTCAAGATTCTTGATTTACATGATGCTTTAACTGATTTGTTGCCTGATATGGAAG-AGAT  1095

Query  1092  CTTT-GACTC-AGATTCATCAGA-TGCTATTAGAGCTCAGGCTGTTGAGATTCAATCGAG  1148
              ||| || || || |||||| || | | |||   | ||| |||   ||||||||||| ||
Sbjct  1096  -TTTCGATTCGAG-TTCATCGGAAT-CGATTCTTGTTCAAGCTACAGAGATTCAATCAAG  1152

Query  1149  GTTAGCGGAAGCAGCGAGAGGTATACTTTCGGAGTTTGAGAATGCGGTTCTTCGCGAACC  1208
              ||||| |||||||| ||||| |||||  | |||||||||||||||||| |||| |||||
Sbjct  1153  ATTAGCTGAAGCAGCAAGAGGGATACTCACTGAGTTTGAGAATGCGGTTTTTCGTGAACC  1212

Query  1209  TTCGATAGTTCCTGTCCCTGGAGGAACGATTCATCCATTGACAAGGTATGTGATGAACTA  1268
              ||| | |||||||||||||||||||| || ||||| |||||||||||||||||||| ||
Sbjct  1213  ATCGGTTGTTCCTGTCCCTGGAGGAACTATACATCCTTTGACAAGGTATGTGATGAATTA  1272

Query  1269  CATTGT-TATGATCTCTGATTATAAGCAAACGTTGGAT-GATCTCATCATGTCGAATCCC  1326
             | |    | |||||||||| |||||| |||||||| || |||||||| ||| |||| || 
Sbjct  1273  CCTCAACT-TGATCTCTGACTATAAGGAAACGTTG-ATTGATCTCATTATGACGAAACCA  1330

Query  1327  TCTACTGG-TT--C--TG-ATCCAA--A-C-A--CA--CCGGATATGGATTTCACGGAG-  1371
             | | | || ||  |  || | ||||  | | |  ||  || ||||||||| || |  || 
Sbjct  1331  TGT-CGGGGTTTGCAATGTA-CCAATGATCCAAACAATCCCGATATGGATATCTCTCAGC  1388

Query  1372  TTGGATAGTAA-ATCTCCGTTGGATTTGCATTTGATATGGTTGATTGTGGT-CTTGCATT  1429
             ||| | || || ||||||||| | ||||||| ||||||||   || ||| | ||  || |
Sbjct  1389  TTG-A-AGGAATATCTCCGTTAGCTTTGCATATGATATGGACAATGGTGATGCTA-CAAT  1445

Query  1430  TCAA-CTTAGAAGAGAAATCCAAGCACTATAGAGAC-ACATCTCTAGCTCACATATTCAT  1487
             |||| || ||||||||| ||   ||| || | |||  | | || || ||||||| ||| |
Sbjct  1446  TCAATCT-AGAAGAGAAGTCTTTGCATTACAAAGATGA-ACCTTTATCTCACATCTTCGT  1503

Query  1488  CATGAACAACATCCATTACATTGTTCAGAAAGTGAAAAGGTCACCAGAACTAC-GAGAGA  1546
              ||||||||  |||||||||| |||||||| || ||||| || || || |||  | ||| 
Sbjct  1504  TATGAACAATGTCCATTACATAGTTCAGAAGGTCAAAAGCTCGCCGGAGCTAATG-GAGT  1562

Query  1547  TGATTGGAGACCATTATTTAAGGAAA-CTCACTGGGATATTTAGACATGCTGCCACAAAC  1605
             ||||||||||| | |||||||| ||| || || |||||||||||||| || ||||| || 
Sbjct  1563  TGATTGGAGACAAGTATTTAAG-AAAGCTTACCGGGATATTTAGACAGGCAGCCACCAAG  1621

Query  1606  TACCAGAGAGCTACATGGGTCAGAGTACTGAATAGTTTGAGAGATGAAGGATTACATGTG  1665
             || ||||||||||||||||| |||||  ||||||| ||||||||||||||||||||||||
Sbjct  1622  TATCAGAGAGCTACATGGGTTAGAGTGTTGAATAGCTTGAGAGATGAAGGATTACATGTG  1681

Query  1666  AGTGGGAGTTTCTCCTCAGGTGTATCAA-GAAGTGCATTAAGAGAGAGGTTTAAGGCATT  1724
             || || || ||||| || |||||||||| || |||| ||||||||||||||||| || ||
Sbjct  1682  AGCGGAAGCTTCTCTTCCGGTGTATCAAAGA-GTGCTTTAAGAGAGAGGTTTAAAGCTTT  1740

Query  1725  CAATACAATGTTCGAAGAGGTTCACAGGACTCAGTCCACATGGTCGGTTCCAGATGCTCA  1784
             |||||||||||| |||||||||||||||| ||| || |||||||||||||||||| ||||
Sbjct  1741  CAATACAATGTTTGAAGAGGTTCACAGGATTCAATCGACATGGTCGGTTCCAGATACTCA  1800

Query  1785  GCTTAGAGAAGAACTCCGAATATCGCTATCCGAGCATCTAATCCCTGCTTATAGATCGTT  1844
             |||||||||||||||  | ||||| ||||| || ||||| ||||| ||||||||||| ||
Sbjct  1801  GCTTAGAGAAGAACTGAGGATATCTCTATCGGAACATCTTATCCCGGCTTATAGATCCTT  1860

Query  1845  TCTTGGAAGGTTCAGGGGTCATATAGAGAGTGGAAGACACCCTGAGAACTATTTGAAATA  1904
             ||||||||| |||||||| ||||||||||| |||||||| || || ||||| ||||||||
Sbjct  1861  TCTTGGAAGATTCAGGGGACATATAGAGAGCGGAAGACATCCAGAAAACTACTTGAAATA  1920

Query  1905  TTCGGTTGA-AGATATCGAGACCA-TCGT-TCTAGATTTCTTCGAAGGATATACCACACC  1961
              || ||||| | || | || |||  | || | | |||||||||||||||||||||||| |
Sbjct  1921  CTCTGTTGACA-ATCTTGAAACCGCT-GTGT-TGGATTTCTTCGAAGGATATACCACAGC  1977

Query  1962  ACCACACTTGAG  1973
              ||||| |||||
Sbjct  1978  TCCACATTTGAG  1989



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 84255621940


  Database: halleri_transcript_ahg.fa
    Posted date:  Sep 25, 2014  2:02 AM
  Number of letters in database: 38,939,717
  Number of sequences in database:  32,672



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5