BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G14440.1 Length=2312 Score E Sequences producing significant alignments: (Bits) Value Ahg478868 jgi|Araly1|478868|fgenesh2_kg.3__1569__AT3G14440.1 3674 0.0 Ahg952338 jgi|Araly1|952338|scaffold_6000006.1 706 0.0 > Ahg478868 jgi|Araly1|478868|fgenesh2_kg.3__1569__AT3G14440.1 Length=2290 Score = 3674 bits (1989), Expect = 0.0 Identities = 2198/2299 (96%), Gaps = 14/2299 (1%) Strand=Plus/Plus Query 1 AAACCAActctctcttctctcttctctcctctcttctACAAGAAGaaaaaaaaCAGAGCC 60 |||||||||||||||||||||||||| || | | | ||||| ||||||||||||||| Sbjct 1 AAACCAACTCTCTCTTCTCTCTTCTC-ACT-TGAACAATAAGAAAAAAAAAAACAGAGCC 58 Query 61 TTTACACATCTCAAAATCGAACTTACTTTAACCACCAAATACTGATTGAACACACTTGAA 120 |||||||||||||| ||||||| | ||||| |||||||||||||||| || |||||| Sbjct 59 TTTACACATCTCAAGATCGAAC-CAATTTAATCACCAAATACTGATTGGACTTTCTTGAA 117 Query 121 AA-ATGGCTTCTTTCACGGCAACGGCTGCGGTTTCTGGGAGATGGCTTGGTGGCAATCAT 179 || ||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||| Sbjct 118 AACATGGCTTCTTTCACGGCGACGGCTGCGGTTTCTCGGAGATGGGTTGGTGGCAATCAT 177 Query 180 ACTCAGCCGCCATTATCGTCTTCTCAAAGCTCCGACTTGAGTTATTGTAGCTCCTTACCT 239 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct 178 ACTCAGCCGCCATTATCGTCTTCCCAAAGCTCCGACTTCAGTTATTGTAGCTCCTTACCT 237 Query 240 ATGGCCAGTCGTGTCACACGTAAGCTCAATGTTTCATCTGCGCTTCACACTCCTCCAGCT 299 ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 238 ATGACCAGTCGTGTCACACGAAAGCTCAATGTTTCATCTGCGCTTCACACTCCTCCAGCT 297 Query 300 CTTCATTTCCCTAAGCAATCATCAAACTCTCCCGCCATTGTTGTTAAGCCCAAAGCCAAA 359 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 298 CTTCATTTCCCTAAGCAATCATCAAACTCTCCCGCCATTGTTGTTAACCCCAAAGCCAAA 357 Query 360 GAATCCAACACTAAACAGATGAATTTGTTCCAGAGAGCGGCGGCGGCAGCGTTGGACGCG 419 |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 358 GAATCCGACACTAAACAGATGAATTTGTTCCAGAGAGCGGCGGCGGCAGCTTTGGACGCG 417 Query 420 GCGGAGGGTTTCCTTGTCAGCCACGAGAAGCTACACCCGCTTCCTAAAACGGCTGATCCT 479 ||||||||||||||||| |||||||||| ||||||||| |||||||||||| |||||||| Sbjct 418 GCGGAGGGTTTCCTTGTGAGCCACGAGAGGCTACACCCTCTTCCTAAAACGTCTGATCCT 477 Query 480 AGTGTTCAGATCGCCGGAAATTTTGCTCCGGTGAATGAACAGCCCGTCCGGCGTAATCTT 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 478 AGTGTTCAGATCGCCGGAAATTTTGCTCCGGTGAATGAACAGCCCGTCCGGCGTAATCTT 537 Query 540 CCGGTGGTCGGAAAACTTCCCGATTCCATCAAAGGAGTGTATGTGCGCAACGGAGCTAAC 599 ||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||| Sbjct 538 CCGGTGGTCGGAAAAATACCTGATTCCATCAAAGGAGTGTATGTGCGCAACGGAGCTAAC 597 Query 600 CCACTTCACGAGCCGGTGACAGGTCACCACTTCTTCGACGGAGACGGTATGGTTCACGCC 659 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 598 CCACTTCACGAGCCGGTGACAGGACACCACTTCTTCGACGGAGACGGTATGGTTCACGCC 657 Query 660 GTCAAATTCGAACACGGTTCAGCTAGCTACGCTTGCCGGTTTACTCAGACTAACCGGTTT 719 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 658 GTCAAATTCGAAGACGGTTCAGCTAGCTACGCTTGCCGGTTTACTCAGACTAACCGGTTT 717 Query 720 GTTCAGGAACGTCAATTGGGTCGACCGGTTTTCCCCAAAGCCATCGGTGAGCTTCACGGC 779 |||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 718 GTTCAGGAGCGTGAATTGGGTCGACCGGTTTTCCCCAAAGCTATCGGTGAGCTTCACGGC 777 Query 780 CACACCGGTATTGCCCGACTCATGCTATTCTACGCCAGAGCTGCAGCCGGTATAGTCGAC 839 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 778 CACACCGGTATTGCCCGACTCATGCTATTCTACGCCAGAGCTGCAGCCGGTATAGTCGAC 837 Query 840 CCGGCACACGGAACCGGTGTAGCTAACGCCGGTTTGGTCTATTTCAATGGCCGGTTATTG 899 ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct 838 CCGGCACACGGAACCGGTGTAGCCAACGCCGGTTTGGTCTATTTCAACGGCCGGTTATTG 897 Query 900 GCTATGTCGGAGGATGATTTACCTTACCAAGTTCAGATCACTCCCAATGGAGATTTAAAA 959 || ||||||||||| ||||| ||||||||||||| ||||||||||| ||||||||||||| Sbjct 898 GCGATGTCGGAGGACGATTTGCCTTACCAAGTTCGGATCACTCCCAGTGGAGATTTAAAA 957 Query 960 ACCGTTGGTCGGTTCGATTTTGATGGACAATTAGAATCCACAATGATTGCCCACCCGAAA 1019 ||||||||||||||||||||||| |||||||| || |||||||||||||||||||||||| Sbjct 958 ACCGTTGGTCGGTTCGATTTTGACGGACAATTGGATTCCACAATGATTGCCCACCCGAAA 1017 Query 1020 GTCGACCCGGAATCCGGTGAACTCTTCGCTTTAAGCTACGACGTCGTTTCAAAGCCTTAC 1079 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1018 GTCGACCCGGAATCCGGTGAACTCTTCGCTTTAAGTTACGACGTCGTTTCAAAGCCTTAC 1077 Query 1080 CTAAAATACTTCCGATTCTCACCGGACGGAACTAAATCACCGGACGTCGAGATTCAGCTT 1139 || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1078 CTGAAATACTTCCGATTCTCGCCGGACGGAACTAAATCACCGGACGTCGAGATTCAGCTT 1137 Query 1140 GATCAGCCAACGATGATGCACGATTTCGCGATTACAGAGAACTTCGTCGTCG-TACCTGA 1198 |||||||| || |||||||||||||||||||||||||||||||||||||| | |||| || Sbjct 1138 GATCAGCCGACAATGATGCACGATTTCGCGATTACAGAGAACTTCGTCGT-GATACCGGA 1196 Query 1199 CCAGCAAGTCGTTTTCAAGCTGCCGGAGATGATCCGCGGTGGGTCTCCGGTGGTTTACGA 1258 ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| Sbjct 1197 CCAGCAAGTCGTTTTCAAGTTGCCGGAGATGATCCGCGGTGGCTCTCCGGTGGTTTACGA 1256 Query 1259 CAAGAACAAGGTCGCAAGATTCGGGATTTTAGACAAATACGCCGAAGATTCATCGAACAT 1318 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| || Sbjct 1257 CAAGAACAAGGTCTCAAGATTCGGAATTTTAGACAAATACGCCGAAGATTCATCGAATAT 1316 Query 1319 TAAGTGGATTGATGCTCCAGATTGCTTCTGCTTCCATCTCTGGAACGCTTGGGAAGAGCC 1378 ||||||||||||||| || || |||||||||||||||||||||||||||||||||||||| Sbjct 1317 TAAGTGGATTGATGCGCCTGACTGCTTCTGCTTCCATCTCTGGAACGCTTGGGAAGAGCC 1376 Query 1379 AGAAACAGATGAAGTCGTCGTGATAGGGTCCTGTATGACTCCACCAGACTCAATTTTCAA 1438 ||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct 1377 AGAAACAGAGGAAGTCGTCGTGATCGGGTCGTGTATGACTCCACCAGACTCAATTTTCAA 1436 Query 1439 CGAGTCTGACGAGAATCTCAAGAGTGTCCTGTCTGAAATCCGCCTGAATCTCAAAACCGG 1498 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1437 CGAGTCTGACGAGAATCTCAAGAGTGTCCTCTCTGAAATCCGCCTGAATCTCAAAACCGG 1496 Query 1499 TGAATCAACTCGCCGTCCGATCATCTCCAACGAAGATCAACAAGTCAACCTCGAAGCAGG 1558 ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct 1497 TGAATCAACTCGCCGTCCGATCATCGCCGACGAAGATCAACAAGTCAACCTCGAAGCAGG 1556 Query 1559 GATGGTCAACAGAAACATGCTCGGCCGTAAAACCAAATTCGCTTACTTGGCTTTAGCCGA 1618 ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct 1557 GATGGTCAACAGAAACATGCTCGGCCGGAAAACAAAATTCGCTTACTTGGCTTTAGCCGA 1616 Query 1619 GCCGTGGCCTAAAGTCTCAGGATTCGCTAAAGTTGATCTCACTACTGGAGAAGTTAAGAA 1678 ||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct 1617 GCCATGGCCTAAAGTCTCAGGATTCGCTAAAGTTGATCTCACTACCGGAGAAGTCAAGAA 1676 Query 1679 ACATCTTTACGGCGATAACCGTTACGGAGGAGAGCCTCTGTTTCTCCCCGGAGAAGGAGG 1738 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1677 ACATCTCTACGGCGATAACCGTTACGGAGGAGAGCCTCTGTTTCTCCCCGGAGAAGGAGG 1736 Query 1739 AGAGGAAGACGAAGGATACATCCTCTGTTTCGTTCACGACGAGAAGACATGGAAATCGGA 1798 ||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1737 AGAAGAAGACGAAGGACACATCCTCTGTTTCGTTCACGACGAAAAGACATGGAAATCGGA 1796 Query 1799 GTTACAGATAGTTAACGCCGTTAGCTTAGAGGTTGAAGCAACGGTTAAACTTCCGTCAAG 1858 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1797 GTTACAGATAGTTAACGCCGTTAGCTTGGAGGTTGAAGCAACGGTTAAACTTCCGTCAAG 1856 Query 1859 GGTTCCGTACGGATTTCACGGTACATTCATCGGAGCCGATGATTTGGCGAAGCAGGTCGT 1918 |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct 1857 GGTTCCGTACGGATTTCACGGTACATTCATCGGAGCAGATGATTTGGCTAAGCAGGTCGT 1916 Query 1919 GTGAGTTCTTATGTGTAAATACGCACAAAATACATATACGTGATGAAGAAGCTTCTAGAA 1978 ||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||| Sbjct 1917 GTGAGTTCTTATGTGTATATACACACAAAATACGTATACGTGATGAAGAAGCTTCTAGAA 1976 Query 1979 GGAAAAGAGAGAGCGAGATTTACCAGTGGGATGCTCTGCATATACGTCCCCGGAATCTGC 2038 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1977 G-AAAAGAGAGAGCGAGATTTACCAGTGGGATGCTCTGCATATACGTCCCCGGAATCTGC 2035 Query 2039 TCCTCTGtttttttttttttgctctgtttctt-gtttgttgtttcttttggggtgcggtt 2097 |||||||||||||||| | |||||||||||| | ||||||||||||||||||||||||| Sbjct 2036 TCCTCTGTTTTTTTTTGT--GCTCTGTTTCTTTGGTTGTTGTTTCTTTTGGGGTGCGGTT 2093 Query 2098 tgctagttccctttttttt-GGGGTCAATCTAGAAATCTGAAAGATTTTGAGGGACCAGC 2156 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 2094 TGCTAGTTCCCTTTTTTTTTGGGGTCAATCTAGAAATCTGAAAGATTTTGAGGGACCAGT 2153 Query 2157 TTGTAGCTTTTGGGCTGTAGGGTAGCCTAGCCGTT-CGAGCTCAGCTGGTTTCTGTTATT 2215 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 2154 TTGTAGCTTTTGGGCTGTAGGGTAGCCTAGCCGTTTCGAGCTCAGCTGGTTTCTGTTATT 2213 Query 2216 CTTTCACTTATTGTTCATCGTAATGAGAAGTATATAAAATATTAAACAACAAAGATATGT 2275 |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| Sbjct 2214 CTTTCACTTATTGTTCATCGTAATGAGAAGTATATAAA-TATTAAACAA-AAAGATATGT 2271 Query 2276 TTGTATATGTGCATGAATT 2294 || |||||||||||| ||| Sbjct 2272 TTATATATGTGCATGTATT 2290 > Ahg952338 jgi|Araly1|952338|scaffold_6000006.1 Length=1862 Score = 706 bits (382), Expect = 0.0 Identities = 1133/1482 (76%), Gaps = 105/1482 (7%) Strand=Plus/Plus Query 456 CCGCTTCCTAAAACGGCTGATCCTAG-TGTTCAGATCGCCGGAAA-TT-TTGCTCCGGTG 512 ||||||||||||||||| ||||| | || || || |||||||| || || | ||||| Sbjct 381 CCGCTTCCTAAAACGGCGGATCC-CGCCGTCCAAATAGCCGGAAACTTCTT-C-CCGGT- 436 Query 513 A-ATGAACAGCCCGTCCG-GCGTAATCTTCCGGTGGTC-GGAAAACTTCCCGATTCCA-T 568 | || || || || || || ||| |||||||||| | |||| | | || |||| || | Sbjct 437 ACCGGAGCAACCAGT-CGTGCATAACCTTCCGGTGG-CTGGAACAGTACCAGATTGCATT 494 Query 569 CAAAGGAGTGTATGTGC-GCAACGGAGCTAACCCACTTCACGAG-CCGGTGACAGGTCAC 626 | ||||||| || || | | |||||||| || || |||||| || || | | || ||| Sbjct 495 C-AAGGAGTTTACGT-CAGAAACGGAGCGAATCCGCTTCAC-AGACCAATCTCCGGGCAC 551 Query 627 CACTTCTTCGACGGAGACGGTATGGTTCACGCCG-TCAAATTCGA-ACACGGTTCAGCTA 684 || || |||||||||||||||||||||||||| | || || || | ||||||| | || Sbjct 552 CATTTATTCGACGGAGACGGTATGGTTCACGCTGTTC-GGTTTGATA-ACGGTTCGGTTA 609 Query 685 GCTACGCTTGCCGGTTTACTC-AGACTAACCGGTTTGTTCAGGAACGTCAATTGGGTCGA 743 |||||||||| |||||||| | | || |||||||| ||||| ||||| |||| ||||| Sbjct 610 GCTACGCTTGTCGGTTTAC-CGAAACAAACCGGTTGGTTCAAGAACGAGAATTTGGTCGC 668 Query 744 CCGGTTTTCCCCAAAGCCATCGGTGAGCTTCACGGCCACACCGGTATTGCCCGA-CTCAT 802 || |||||||||||||| || || ||||||||||| || || || | || | || || Sbjct 669 CCTGTTTTCCCCAAAGCAATTGGAGAGCTTCACGGACATTTAGGAATCG-CCAAGCTTAT 727 Query 803 GCTATTCTACGCCAGAGCTGC-A-GCCGGTATAGTCGACCCGGCACACGGAAC-CGGTGT 859 ||| ||| || || | | || | | ||| ||||||||||| | || || || |||||| Sbjct 728 GCTCTTCAACACCCGCG-GGCTATTCGGGT-TAGTCGACCCGACCCAAGG-ACTCGGTGT 784 Query 860 AGCTAACGCCGGTTTGGTCTATTTCAATGGCCGGT-TATTGGCTATGTCGGAGGATGATT 918 |||||||||||||| |||||||||||||| | | | || || ||||| || || |||| Sbjct 785 CGCTAACGCCGGTTTAGTCTATTTCAATGGTC-ATCTCTTAGCAATGTCTGAAGACGATT 843 Query 919 TACCTTACCAAGTTCAGA-TCACTCCCAA-TGGAGATTTAAAAACCGTT--GGTCGGTTC 974 |||| ||||| | ||| | ||||| | || ||||||||| ||| | || ||||||| | Sbjct 844 TACCGTACCATG-TCAAAGTCACT-CAAACCGGAGATTTAGAAA-C-TTCGGGTCGGTAC 899 Query 975 GATTTTGATGGACAATTAGAATCCACAATGATTGCCCACCCGAAAG-TCGACCCGGAATC 1033 ||||| || || || ||| ||||||||||||| ||||||||| ||| ||||||||||| | Sbjct 900 GATTTCGACGGTCAGTTAAAATCCACAATGATAGCCCACCCG-AAGATCGACCCGGAAAC 958 Query 1034 CGGTGAACTCTTCGCTTTAAGCTACGACGTCGTTTCAAAGCCTTACCTAAAATACTTCCG 1093 | | || || |||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 959 CCGAGAGCTATTCGCTTTAAGCTACGACGTCGTTTCAAAGCCTTACCTAAAATACTTCAG 1018 Query 1094 ATTCTCA-CCGGACGGA-ACTAAATCACCGGACGTCGAGATTCAGCTTGATCAGCCAACG 1151 |||| || ||| |||| | |||||||| ||||||||||||| ||||||| | |||||| Sbjct 1019 ATTCACATCCG-ACGGCGAG-AAATCACCAGACGTCGAGATTCCGCTTGATGAACCAACG 1076 Query 1152 ATGATGCACGATTTCGCGATTAC-AGAGAACTTCGTCGTCG-TACCTGACCAGCAAGTCG 1209 ||||| ||||||||||| ||||| | |||| ||||| || | | || ||||| ||||| | Sbjct 1077 ATGATCCACGATTTCGCAATTACTA-AGAATTTCGTAGT-GATCCCAGACCAACAAGTGG 1134 Query 1210 TTTTCAAGCT-GCCGGAGATGATCCGCGGTGGGTCTCCGGTGGTTTACGACAAGAACAAG 1268 ||||| | | ||||||||||||| | ||||| |||||||||||||||||| |||| ||| Sbjct 1135 TTTTCC-GATTGCCGGAGATGATCAGAGGTGGTTCTCCGGTGGTTTACGACGAGAAGAAG 1193 Query 1269 GTCGCAAGATTCGGGATTTTAGAC-AAATACGCCGAA-GATTCATCGAAC-ATT-AAGTG 1324 ||||||| |||||||| || |||||||| ||| || | ||| | ||| || || Sbjct 1194 AAATCAAGATTTGGGATTTT-GAATAAATACGC-GAAAGAGGCTTCGT-CGATTCAA-TG 1249 Query 1325 GATTGATGCT-CCAGATTGCTTCTGCTTCCATCTCTGGAACGCTTGGGAAGAGCCAGAAA 1383 ||| || | | |||||||| ||||| || |||||||||||| |||||||||| ||||||| Sbjct 1250 GATCGAAG-TACCAGATTGTTTCTGTTTTCATCTCTGGAACTCTTGGGAAGAACCAGAAA 1308 Query 1384 CAGATGAAGTCGTCGTGATAGGGTCCTGTATGACTCCACCAGACTCAATTTTCAACGAGT 1443 |||| ||||| |||||||| || || || ||||| ||||| || || ||||||||||| Sbjct 1309 CAGACGAAGTTGTCGTGATTGGATCATGCATGACGCCACCTGATTCGATTTTCAACGAAC 1368 Query 1444 -CTGACGAGAAT-CT-CAAGAGTGTCCTGTCTGAAATCCGCCTGAATCTCAAAACCGGTG 1500 | ||||| || || || |||| |||| || || | || || || ||||| || | Sbjct 1369 AC-GACGA-AACGCTTCATT-GTGTTTTGTCGGAGATAAGGCTAAACCTGAAAACAGGGG 1425 Query 1501 AATCAACTCGCCGTCCGATCATCTCCAACGAAGATCAACAAGTCAACCTCGAAGCAGGGA 1560 ||||||| || | ||| | || ||| ||| ||| || || |||||||| || | Sbjct 1426 AATCAACACGTAGACCGGTTATTTCC---GAA---CAA---GTTAATCTCGAAGCCGGTA 1476 Query 1561 TGGTCAACAGAAACATGCTCGGCCGTAAAAC-CAAATTCGCTTACTTGGCTTTAGCCGAG 1619 |||| ||| | || | | || ||||| | || ||||| ||||||||| |||| Sbjct 1477 TGGTAAACCGGAATTTATTAGGTAAAAAAACACGGTTT-GCTTATTTGGCTTTAACCGAA 1535 Query 1620 CCGTGGCCTAAAGTCTCAGGATTCGCTAAAGTTGATCTCA-CTACTGGAGA-AGTTAAGA 1677 |||||||||||||| || || |||| |||||| || || | | || ||||| | || | | Sbjct 1536 CCGTGGCCTAAAGTGTCCGGTTTCGTTAAAGTGGA-CTTATCGACCGGAGATA-TTCA-A 1592 Query 1678 AAC-ATCTTTACGGCGATAACCGTTACGGAGGAGAGCCTCTGTTTCT-CC--CCGGAGAA 1733 || || | || || ||| ||||||||||||||||||||||| || |||| || Sbjct 1593 AAGTATATATATGGAGATGGGAAATACGGAGGAGAGCCTCTGTTTCTGCCTTCCGGTGAC 1652 Query 1734 GGAGGAGAGGAAGACGAAGGATACATCCTC-TGTTTCGTTCACGACGAGAAGACATG-GA 1791 || | | || |||||| || ||||| | |||| ||||||||||||| ||| | | || Sbjct 1653 GGTG-A-AG-AAGACGGTGGTTACATTATGGTGTT-CGTTCACGACGAGGAGA-AGGTGA 1707 Query 1792 AATCGGAGTTACAGAT-AGTTAACGCCGTTAGCT-TAGAGG-TTGAAGCAACGGTTAAAC 1848 ||||||| | || || | | |||||||||| | | || | ||||||| || |||| | Sbjct 1708 AATCGGAACTCCAAATCA-TAAACGCCGTTAA-TAT-GAAGCTTGAAGCTACCGTTACGC 1764 Query 1849 TTCCGTCAAGGGTTCCGTACGGATTTC-ACGGTACATTCATC 1889 ||||||| || || || || || |||| |||| || |||||| Sbjct 1765 TTCCGTCGAGAGTGCCTTATGG-TTTCCACGGAACGTTCATC 1805 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 87074300070 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5