BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G15354.1
Length=3103
Score E
Sequences producing significant alignments: (Bits) Value
Ahg929326 jgi|Araly1|929326|scaffold_301783.1 4242 0.0
Ahg914489 jgi|Araly1|914489|Al_scaffold_0001_4743 893 0.0
> Ahg929326 jgi|Araly1|929326|scaffold_301783.1
Length=2612
Score = 4242 bits (2297), Expect = 0.0
Identities = 2512/2617 (96%), Gaps = 10/2617 (0%)
Strand=Plus/Plus
Query 338 TAGCTTTTGGTGGATGTTAAATGGAAGGTTCTTCAAATTCTAACTCTAGGGGATTCAATA 397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 TAGCTTTTGGTGGATGTTAAATGGAAGGTTCTTCAAATTCTAACTCTAGGGGATTCAATA 60
Query 398 CCTCTGGTGTTTCAGATAGGAACACTGAGTTCTTACCTGTTGAGAGACTCACTA-CTCGT 456
|||||||||||||||| |||||||||||||||||||||||||||||| |||| | |||||
Sbjct 61 CCTCTGGTGTTTCAGACAGGAACACTGAGTTCTTACCTGTTGAGAGAATCAC-AGCTCGT 119
Query 457 TCCAAGCCTTCCTCTCATGTTGATGAGTATGTCAGAAGCTTGTTTGGTAGTACTAGCACA 516
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 120 TCGAAGCCTTCCTCTCATGTTGATGAGTATGTCAGAAGCTTGTTTGGTAGTACTAGTACA 179
Query 517 CACAAGTCTGGTGAAGATGATTCTTTAGGGATTGATCCTTTTGTTAGATCCTTGGAATGG 576
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 180 CACAAGTCCGGTGAAGATGATTCTTTAGGGATTGATCCTTTTGTTAGGTCCTTGGAATGG 239
Query 577 GGTGATGTTAGTTTGAGACAGTGGCTGGATAAACCTGAACGATCTGTTGATGTTTTCGAG 636
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 240 GGTGATGTTAGTTTGAGACAGTGGCTGGATAAACCTGAACGATCTGTAGATGTTTTCGAG 299
Query 637 TGCTTGCACGTTTTCAGACAAATTGTTGAGATTGTGAATGCGGCTCACTCTCAAGGCATT 696
||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct 300 TGCTTGCACGTTTTCAGACAAATCGTTGAGATTGTGAATGCTGCTCACTCTCAAGGCATT 359
Query 697 GTTGTTCATAATGTCAGGCCATCATGTTTTGTCATGTCTTCGTTTAACCATGTTTCGTTC 756
||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct 360 GTTATTCATAATGTCAGGCCTTCTTGTTTTGTCATGTCTTCGTTTAACCATGTTTCGTTC 419
Query 757 ATTGAATCTGCTTCTTGTTCGGACTCTGGCTCTGATTCCTTGGAGGATGGTCCAATTAGC 816
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 ATTGAATCCGCTTCTTGTTCGGACTCTGGCTCTGATTCCTTGGAGGATGGTCCAATTAGC 479
Query 817 CAGAAGGAAATCGGTAGCTCGAGAAGAGAGGAAGCTGTATCGAAAGCTATTGCAATAGAA 876
||||||||||| ||||||||||||||||||||| |||||||||||||| |||| ||||||
Sbjct 480 CAGAAGGAAATTGGTAGCTCGAGAAGAGAGGAAACTGTATCGAAAGCTGTTGCGATAGAA 539
Query 877 GAGAAAGGAGTCTACAATAAGTTGTTGGAGAGAAAAATCGAGAAACTAGAGGAAGAAAA- 935
||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||
Sbjct 540 GAGAAAGGAGTCTACAATAAGTTTTTGGAGAGACGAATTGAGAAACTAGAGGAAGAAAAG 599
Query 936 AACCCAACCTTTTCCGATGAAACATATATTAGCAATGGAGACAAGTTGGTACACAAGCCC 995
|| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 600 AA-TCAACCTTTTCCGATGAAACATATATTAGCAATGGAGACAAGTTGGTATACAAGCCC 658
Query 996 TGAAGAGGATTTTGGTTCTTCAAGTACTTGTGCTTCAGATGTTTACCGCCTTGGCGTTCT 1055
|||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 659 TGAAGAGGATGTTGATTCTTCAAGTACTTGTGCTTCAGATGTTTATCGCCTTGGCGTTCT 718
Query 1056 TCTTTTCGAGCTATTTTGCCCTGTACCTTCAAGAGAAGAGAAGTCTAGAACTATGTCTAG 1115
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 719 TCTTTTCGAGCTATTTTGCCCTGTACCTTCAAGAGAAGAGAAATCAAGAACTATGTCTAG 778
Query 1116 TCTT-AGACATCGCGTTCTTCCGCCTCAGATATTGCTCAAATGTCCAAAAGAAGCTTCTT 1174
| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 779 T-TTAAGACATCGCGTTCTTCCGCCTCAGATATTGCTCAAATGTCCAAAAGAAGCTTCTT 837
Query 1175 TCTGCTTGTGGTTACTGCATCCTGAGCCAACTTGTCGACCATCAATGAGTGACTTGCTGC 1234
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 838 TCTGCTTGTGGTTACTGCATCCTGAGCCAAGTTGTCGACCATCAATGAGTGACTTGCTGC 897
Query 1235 AAAGCGAGTTTATAACTGAACCTAGAGATAATTTGGAAGAACGTGAAGCAGCAATCGAGC 1294
|||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||
Sbjct 898 AAAGCGAGTTTATAACTGAACCAAGAGATAATTTGGAAGAACGTGAAGCTGCAATCAAGC 957
Query 1295 TTCGGGACAGAATCGAGGAACAGGAGTCGTTACTCGAGTTCTTGTTACTGATTCAACAGA 1354
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 958 TTAGGGACAGAATCGAGGAACAGGAGTCGTTACTCGAGTTCTTGTTACTGATTCAACAGA 1017
Query 1355 GGAAGCAAGAATCTGCGTATAGATTGCAG-GATACTGTTTCACTTCTTTCTTCTGACATT 1413
| ||||| ||||||||||||||||||| | ||||| ||| ||||||||||||||||||||
Sbjct 1018 GAAAGCAGGAATCTGCGTATAGATTGC-GTGATACGGTTGCACTTCTTTCTTCTGACATT 1076
Query 1414 GAGCAAGTTGTAAAGAGACAGTTAATTTTGAAGAAAAGGGGAAGCTCACTCTCTGATTTC 1473
|||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct 1077 GAGCAAGTTGTAAAGAGACAATTAATTTTGAAGAAAAAGGGAAGCTCACTCTCTGATTTC 1136
Query 1474 AGTAAAGATGATCATCAATATACCTCTGGTCAGCCATTGATGAGTTTCCAGGCAAACGAG 1533
||||||||||||||||||||| |||||||||||||| |||| || |||||||||||||||
Sbjct 1137 AGTAAAGATGATCATCAATATCCCTCTGGTCAGCCAATGATAAGCTTCCAGGCAAACGAG 1196
Query 1534 GAGCCATCAGCATTCTTGGCCTCAAGAAAACGGGTTAGACAAGGGATTCT-GGCATTGGA 1592
|||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||
Sbjct 1197 GAGCCATCAGCATTCTTGGCCTCAAGAAAACGATTTAGACAAGGGA-TCTCGGCATTGGA 1255
Query 1593 AAACGGTGTTGAAGTTGATGAAGAGAGTCAAGGAAGCACACTTCTTGAAAGCTCCCGGTT 1652
| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1256 AGACGATGTTGAAGTTGATGAAGAGAGTCAAGGAAGCACACTTCTTGAAAGCTCCCGGTT 1315
Query 1653 GATGAGAAACTTCAAGAAACTAGAATCGGTCTACTTTCTGACAAGGCGCAGGCAAATGAA 1712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1316 GATGAGAAACTTCAAGAAACTAGAATCGGTCTACTTTCTGACAAGGCGCAGGCAAATGAA 1375
Query 1713 GGCTGCTGCTTCAGGGAAATCATTAACTAGACATTCGCCGTTAAGTAGTGAAAATGGAAG 1772
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1376 GGCTGCTGCTTCAGGGAAATCATTAACTAGACACTCGCCGTTAAGTAGTGAAAATGGAAG 1435
Query 1773 AGGTTCTATGATTGTCTCAGAGAAAAGTTCAGTAAGCAACCCGGTGGCACCCAAAGCTTT 1832
|||||| |||||||||||||||||||| |||||||||||||| | ||||| |||| |||
Sbjct 1436 AGGTTCAATGATTGTCTCAGAGAAAAGCTCAGTAAGCAACCCCGCCGCACCTAAAGATTT 1495
Query 1833 CTTCAATAATGACTCGAGACAAGGGGGGTGGATAGATCCTTTCCTTGAGGGTTTGTGCAG 1892
|| |||| |||| ||||||||||| |||||||||||||| ||||||||||||||||| ||
Sbjct 1496 CTACAATCATGATTCGAGACAAGGTGGGTGGATAGATCCATTCCTTGAGGGTTTGTGTAG 1555
Query 1893 ATATTTATCATTCAGTCAGCTAAGAGTGAAAGCTGATTTGAAACAAGGAGATTTGTTGAA 1952
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1556 ATATTTATCATTCAGTCAGCTAAGAGTGAAAGCAGATTTGAAACAAGGAGATTTGTTGAA 1615
Query 1953 CTCTTCTAACCTCGTTTGCGCTCTTGCGTTTGACCGAGAAGGAGAATTATTCGCCACTGC 2012
||||||||||||||||||||| ||||| |||||||| || ||||||||||||||||| ||
Sbjct 1616 CTCTTCTAACCTCGTTTGCGCCCTTGCTTTTGACCGGGATGGAGAATTATTCGCCACGGC 1675
Query 2013 GGGAGTCAACAAGAAAATCAAGATATTCGAATGTAACTCCATAGTAAACGATAACCGGGA 2072
||| ||||||||||||||||||||||| |||||||| ||||| |||||| ||||||||||
Sbjct 1676 GGGTGTCAACAAGAAAATCAAGATATTTGAATGTAATTCCATTGTAAACAATAACCGGGA 1735
Query 2073 TATTCACTATCCGGTGGTGGAATTGGCTGGTCGGTCAAAGCTAAGTAGTTTATGTTGGAA 2132
||||||||||||||| |||||| |||||||| |||||||| |||||||||||||||||||
Sbjct 1736 TATTCACTATCCGGTTGTGGAACTGGCTGGTTGGTCAAAGTTAAGTAGTTTATGTTGGAA 1795
Query 2133 CAGCTACATAAAGAGCCAAATTGCATCAAGTAACTTTGATGGTGTTGTTCAGATATGGGA 2192
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1796 CAGCTACATAAAGAGCCAAATTGCATCAAGTAACTTTGATGGTGTGGTTCAGATATGGGA 1855
Query 2193 TGTTGCAAGAAGCCAGTTGGTTACAGAGATGAAGGAGCACAAGAAGCGAGTATGGTCCAT 2252
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1856 TGTTGCGAGAAGCCAGTTGGTTACAGAGATGAAGGAGCACAAGAAGCGAGTATGGTCCAT 1915
Query 2253 CGATATTTCATCAGCAGACCCGACTTTGCTGGCTAGCGGAAGCGATGATGGAACCGGAGT 2312
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1916 CGATATATCATCAGCAGACCCGACTTTGCTGGCTAGCGGAAGCGATGATGGAACCGGAGT 1975
Query 2313 TAGCATTGGGACCATCAAGACAAAGGCCAATGTATGCTGTGTCCAGTTTCCATCAGACTC 2372
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1976 TAGCATTGGGACCATTAAGACAAAGGCCAATGTATGCTGTGTCCAGTTTCCATCAGACTC 2035
Query 2373 CGGACGGTCTCTAGCATTTGGTTCTGCAGATCATAAAGTGTATTACTACGATCTTCGAAA 2432
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2036 AGGACGGTCTCTAGCATTTGGTTCTGCAGATCATAAAGTGTATTACTACGATCTCCGAAA 2095
Query 2433 CCCCAAGATTCCTCTGTGCACAATGATTGGTCATAGCAAGACAGTGAGTTATGTCAAGTT 2492
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2096 CCCCAAGATTCCTCTTTGCACAATGATTGGTCATAGCAAGACAGTGAGTTATGTCAAGTT 2155
Query 2493 TGTAGATTCATCCACTCTTGTGTCCTCTTCTACTGATAACACACTGAAGCTTTGGGACTT 2552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2156 TGTAGATTCATCCACTCTTGTGTCCTCTTCTACTGATAACACACTGAAGCTTTGGGACTT 2215
Query 2553 GTCGATGTCTGCTTCTGGGATTAATGAATCCCCTCTTCACTCATTCACTGGACACACTAA 2612
|||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct 2216 GTCGATGTCTGCTTCTGGGATTAATGAAACCCCTCTTCACTCATTCACTGGGCACACTAA 2275
Query 2613 TTTAAAGAACTTTGTTGGCTTATCGGTCTCTGATGGGTATATAGCAACAGGCTCAGAGAC 2672
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2276 TTTAAAGAACTTTGTTGGCCTATCGGTCTCTGATGGGTATATAGCAACAGGCTCAGAGAC 2335
Query 2673 TAACGAGGTTTTCGTGTACCACAAGGCATTCCCAATGCCAGTGATGTCGTACATGTTCAA 2732
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2336 TAACGAGGTTTTCGTGTACCACAAGGCTTTCCCAATGCCAGTGATGTCGTACATGTTCAA 2395
Query 2733 CAACACTGACTCTATGTCTGGTCTCGAAGTGGACGATGCATCACAGTTCATATCTTCAAT 2792
||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct 2396 CAACACTGACTCTGTGTCTGGTCTCGAAGTGGACGATGCCTCACAGTTCATATCTTCGAT 2455
Query 2793 CTGCTGGCGAGGACAGTCGTCTACGTTAGTCGCTGCTAACTCCAATGGCAACATAAAAAT 2852
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2456 CTGCTGGCGAGGACAGTCGTCTACGTTAGTCGCTGCTAACTCCAATGGCAACATCAAAAT 2515
Query 2853 TCTGGAGATGATGACTTGAGCCTCTCATAGATCTCTTGTTCTTCTTCTCCGCAAGAGATA 2912
||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||
Sbjct 2516 TCTGGAGATGATGGCTTGAGCCTCTCACAAATCTCTTGTTCTTCTTCTCCGCAAGAGATC 2575
Query 2913 TGCTCTGCTGGAGTGATTGATATAGGGTAAACCATTT 2949
|||||||||||||||||||||||||||||||||||||
Sbjct 2576 TGCTCTGCTGGAGTGATTGATATAGGGTAAACCATTT 2612
> Ahg914489 jgi|Araly1|914489|Al_scaffold_0001_4743
Length=2361
Score = 893 bits (483), Expect = 0.0
Identities = 875/1059 (83%), Gaps = 48/1059 (5%)
Strand=Plus/Plus
Query 1840 AATGACTCGAGACAAGGG-GGGTGGATAGATCCTTTCCTTGAGGGTTTGTGC-AGATATT 1897
||||| || |||| |||| || ||||| ||||| ||||| |||||||||||| || ||||
Sbjct 1309 AATGATTCAAGAC-AGGGCGGTTGGATCGATCCATTCCTCGAGGGTTTGTGCAAG-TATT 1366
Query 1898 TATCATTCAGTCAGCTAAGAGTGAAAGCTGATTTGAAACAAGGAGATTTGTTGAACTCTT 1957
|||| || ||| |||||||||||||||| |||||||| |||||||| ||||||||||| |
Sbjct 1367 TATCTTTTAGTAAGCTAAGAGTGAAAGCCGATTTGAAGCAAGGAGACTTGTTGAACTCGT 1426
Query 1958 CTAACCTCGTTTGCGCTCTTGCGTTTGACCGAGAAGGAGAATTATTCGCCACTGCGGGAG 2017
||||||| ||||| || ||| ||||||||| || || || || ||||| || || || |
Sbjct 1427 CTAACCTTGTTTGTGCAATTGGGTTTGACCGTGATGGGGAGTTTTTCGCTACGGCAGGCG 1486
Query 2018 TCAACAAGAAA-ATCAAGATATTCGAATGTAACTCCATAGTAAACGATAACCGGGATATT 2076
||||||| ||| || |||||||| ||||| | || ||| |||| ||| ||||| |||
Sbjct 1487 TCAACAA-AAAGATTAAGATATTTGAATGCGAGTCGATAATAAAAGATGGGCGGGACATT 1545
Query 2077 CACTATCCGGTGGTGGAA-TTGGCTGGTCGGTCAAAGCTAAGTAGTTTATGTTGGAACAG 2135
|| || ||||| |||||| || ||| | ||||| ||||| ||| || |||||||||||||
Sbjct 1546 CATTACCCGGTTGTGGAACTT-GCTAGCCGGTCTAAGCTTAGTGGTATATGTTGGAACAG 1604
Query 2136 CTACATAAAGAGCCAAATTGCATCAAGTAACTTTGATGGTGTTGTTCAGATATGGGATGT 2195
||||| ||||||||| | ||||||||||||||||| || || |||||| | ||||||||
Sbjct 1605 TTACATTAAGAGCCAAGTCGCATCAAGTAACTTTGAAGGCGTAGTTCAGGTTTGGGATGT 1664
Query 2196 TGCAAGAAGCCAGTTGGTTACAGAGATGAAGGAGCACAAGAAGCGAGTATGGTCCATCGA 2255
|||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||
Sbjct 1665 TGCAAGAAGCCAGTTGGTTACAGAGATGAAAGAGCATGAGAAGCGTGTATGGTCCATCGA 1724
Query 2256 T-ATTTCATCAGCAGACCCGACTTTGCTGGCTAGCGGAAG---CGATGAT--GG--AA-C 2306
| ||| |||||||||| || || ||| | || ||||| || ||||| | || || |
Sbjct 1725 TTATT-CATCAGCAGATCCAACATTGTTAGCCAGCGGTAGTGACGATGGTTCGGTTAAGC 1783
Query 2307 -C-GGAGT-T-AG-CA-----TT-G----GGA-CCATCAAGACAAAGGCCAATGTATGCT 2350
| ||||| | | || || | ||| |||||||||||||||| || |||| |
Sbjct 1784 TCTGGAGTATCAATCAGGGGGTTAGTATTGGAACCATCAAGACAAAGGCAAACATATGTT 1843
Query 2351 GTGTCCAGTTTCCATCAGACTCCGGACGGTCTCTAGCATTTGGTTCTGCAGATCATAAAG 2410
||||||||||||| ||||| || || |||||| || |||||||||| |||||||| ||||
Sbjct 1844 GTGTCCAGTTTCCGTCAGAGTCGGGTCGGTCTTTAACATTTGGTTCAGCAGATCACAAAG 1903
Query 2411 TGTATTACTACGATCTTCGAAACCCCAAGATTCCTCTGTGCACAATGATTGGTCATAGCA 2470
| || ||||| ||||| | | ||||||| ||||||| || |||||||||||||| | ||
Sbjct 1904 TTTACTACTATGATCTAAGGAGCCCCAAGCTTCCTCTTTGTACAATGATTGGTCACAACA 1963
Query 2471 AGACAGTGAGTTATGTCA-AGTTTGTAGATTCATCCACTCTTGTGTCCTCTTCTACTGAT 2529
|||| ||||||||||||| | ||| | |||||||| || |||||||| |||||||| |||
Sbjct 1964 AGACCGTGAGTTATGTCAGA-TTTATGGATTCATCAACACTTGTGTCGTCTTCTACGGAT 2022
Query 2530 AACACACTGAAGCTTTGGGACTTGTCGATGTCTGCTTCTGG-GATTAATGAATCCCCTCT 2588
||||| |||||||| |||||||| || |||||| ||| || | |||| ||| | |||||
Sbjct 2023 AACACGCTGAAGCTATGGGACTTATCAATGTCTATTTCCGGTG-TTAACGAAACACCTCT 2081
Query 2589 TCACTCATTCACTGG-ACACACTAAT-TTAAAGAACTTTGTTGGCTTATCGGTCTCTGAT 2646
||||||||||| ||| |||||||||| |||| |||||||||||| ||||||||||||||
Sbjct 2082 TCACTCATTCA-TGGGACACACTAATGTTAA-GAACTTTGTTGGATTATCGGTCTCTGAC 2139
Query 2647 GGGTATATAGCAACAGGCTCAGAGACTAACGAGGTTTTCGTGTACCACAAGGCATTCCCA 2706
|||||||||||||||||||| |||||||| |||||||| ||||||||||||||||| |||
Sbjct 2140 GGGTATATAGCAACAGGCTCGGAGACTAATGAGGTTTTTGTGTACCACAAGGCATTTCCA 2199
Query 2707 ATGCCAGTGATGTCGTACATGTTCAACAAC-ACT-GACTCTATGTCTGG-TCTCGAAGTG 2763
||||| || ||||||||| |||||| ||| | | ||| || |||| || |||||||||
Sbjct 2200 ATGCCGGTTTTGTCGTACAAGTTCAA-AACTA-TAGACCCTGTGTC-GGATCTCGAAGTA 2256
Query 2764 GACGATGCATCACAGTTCATATCTTCAATCTGCTGGCGAGGACAGTCGTCTACGTTAGTC 2823
|||||||| || ||||||||||| ||| |||||||||| |||||||| || || ||||||
Sbjct 2257 GACGATGCCTCGCAGTTCATATCCTCAGTCTGCTGGCGGGGACAGTCCTCGACCTTAGTC 2316
Query 2824 GCTGCTAACTCCAATGGCAACATAAAAATTCTGGAGATG 2862
||||| ||||||| ||||||||| || ||||||||||||
Sbjct 2317 GCTGCAAACTCCACTGGCAACATCAAGATTCTGGAGATG 2355
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 117203683865
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5