BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G15730.1 Length=2810 Score E Sequences producing significant alignments: (Bits) Value Ahg479029 jgi|Araly1|479029|fgenesh2_kg.3__1730__AT3G15730.1 4466 0.0 Ahg914427 jgi|Araly1|914427|Al_scaffold_0001_4681 2106 0.0 > Ahg479029 jgi|Araly1|479029|fgenesh2_kg.3__1730__AT3G15730.1 Length=2782 Score = 4466 bits (2418), Expect = 0.0 Identities = 2669/2790 (96%), Gaps = 17/2790 (1%) Strand=Plus/Plus Query 14 CACGGACCAGATCCCGAATTCTTCTTCTGACCACCGAACGATTGAGTTTCTCCGATCAGA 73 |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| Sbjct 1 CACGGACCAGATCCCGAATTCTTCATCTGACCACCGACCGATTGAGTTTCTCCGATCAGA 60 Query 74 TCTCAGTTTCT-GGGAATAATTCGAAGTGAAAAAATGGCGCAGCATCTGTTGCACGGGAC 132 ||||||||||| ||||| |||| |||||||| |||||||||||||||||||||||||||| Sbjct 61 TCTCAGTTTCTGGGGAA-AATTTGAAGTGAACAAATGGCGCAGCATCTGTTGCACGGGAC 119 Query 133 TTTACATGCTACCATCTATGAAGTTGATGCCCTCCATGGTGGTGGTGTTAGGCAAGGCTT 192 ||||||||| || |||||||||||||||||||||||||||||||| || ||||||||||| Sbjct 120 TTTACATGCGACAATCTATGAAGTTGATGCCCTCCATGGTGGTGGAGTCAGGCAAGGCTT 179 Query 193 CCTTGGCAAGATTCTGGCAAATGTAGAAGAGACGATTGGTGTTGGTAAAGGAGAAACACA 252 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || Sbjct 180 CCTTGGCAAGATTCTGGCAAATGTAGAAGAGACGATTGGTGTTGGCAAAGGAGAAACGCA 239 Query 253 GTTGTATGCGACGATTGATCTGCAAAAAGCTAGAGTTGGGAGAACCAGGAAGATCAAAAA 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 240 GTTGTATGCGACGATTGATCTGCAAAAAGCTAGAGTTGGGAGAACCAGGAAGATCAAAAA 299 Query 313 TGAACCTAAGAACCCAAAGTGGTATGAGTCGTTTCATATTTACTGTGCTCACTTGGCTTC 372 |||||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct 300 TGAACCTACGAACCCAAAGTGGTATGAATCGTTTCATATTTACTGTGCCCACTTGGCTTC 359 Query 373 TGATATCATCTTCACTGTTAAAGATGATAATCCCATTGGAGCTACCCTTATCGGAAGAGC 432 ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| Sbjct 360 TGATATCATCTTCACTGTTAAAGATGATAATCCCATTGGGGCCACCCTTATCGGAAGAGC 419 Query 433 TTACATTCCTGTTGATC-AAGTCATTAACGGCGAGGAAGTGGATCAGTGGGTTGAGATCT 491 |||||||||||||| | ||||| |||| |||||||||||||||| |||||||||||||| Sbjct 420 ATACATTCCTGTTGA-CGAAGTCGTTAATGGCGAGGAAGTGGATCGGTGGGTTGAGATCT 478 Query 492 TGGATAATGACAGAAACCCTATTCAGGGAGGATCAAAGATTCATGTCAAGCTTCAATATT 551 ||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||| Sbjct 479 TGGATAATGACAGAAACCCCATCCAGGGAGGATCAAAGATTCATGTCAAGCTCCAATATT 538 Query 552 TCCATGTTGAGGAGGATCGTAACTGGAACATGGGTATCAAAAGTGCCAAGTTCCCTGGAG 611 |||||||||||||||||||||||||||| | ||||||||||||||| || |||||||||| Sbjct 539 TCCATGTTGAGGAGGATCGTAACTGGAATAAGGGTATCAAAAGTGCTAAATTCCCTGGAG 598 Query 612 TGCCATACACATTCTTCTCGCAGAGACAAGGCTGCAAAGTTTCTCTGTACCAAGATGCTC 671 | |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 599 TTCCATACACGTTCTTCTCGCAGAGACAAGGCTGCAAGGTTTCTCTGTACCAAGATGCTC 658 Query 672 ATATTCCAGACAACTTTGTCCCTAGAATTCCTCTCGCTGGAGGGAAGAACTATGAGCCTC 731 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 659 ATATTCCAGACAACTTTGTCCCTAGAATTCCTCTCGCTGGAGGGAAGAACTATGAGCCTC 718 Query 732 AAAGATGTTGGGAGGATATTTTTGATGCTATTAGCAATGCAAAACACTTGATCTACATTA 791 |||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||| Sbjct 719 AAAGATGTTGGGAGGATATTTTCGATGCCATTAGCAACGCAAAACACTTGATCTACATTA 778 Query 792 CTGGTTGGTCTGTTTACGCTGAGATTGCTTTAGTGAGGGACTCGAGGAGGCCTAAGCCTG 851 | |||||||||||||||| ||||||||| |||||||| |||||||||||||||||||| | Sbjct 779 CGGGTTGGTCTGTTTACGTTGAGATTGCCTTAGTGAGAGACTCGAGGAGGCCTAAGCCAG 838 Query 852 GAGGTGATGTGACCATTGGTGAGCTACTCAAGAAGAAGGCTAGTGAAGGTGTCAGGGTTC 911 |||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct 839 GAGGAGATGTGACCATTGGTGAGCTTCTCAAGAAGAAGGCTAGTGAAGGTGTTAGGGTTC 898 Query 912 TTTTGCTTGTTTGGGATGACAGAACTTCTGTTGATGTGCTGAAGAAAGATGGGCTCATGG 971 |||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct 899 TTTTACTTGTTTGGGATGACAGAACCTCTGTTGATGTCCTGAAGAAAGATGGGCTCATGG 958 Query 972 CTACTCATGATGAAGAGACCGAGAA-TTTCTTCAGGGGAAGTGATGTCCATTGTATTCTG 1030 |||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||| Sbjct 959 CTACTCATGATGAAGAAACCGAGAACTTT-TTCAGGGGAAGTGATGTCCATTGTATTCTG 1017 Query 1031 TGCCCTCGTAACCCGGATGACGGTGGTAGCATAGTCCAAAGTTTGCAGATCTCTACTATG 1090 || ||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||| Sbjct 1018 TGTCCTCGTAACCCGGATGATGGTGGTAGCATAGTCCAAAGCTTGCAGGTCTCTACTATG 1077 Query 1091 TTCACGCATCATCAGAAAATCGTTGTTGTGGACAGCGAGATGCCAAGCAGAGGAGGATCA 1150 |||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct 1078 TTCACGCACCATCAGAAAATCGTTGTTGTGGACAGTGAGATGCCAAACAGAGGAGGATCA 1137 Query 1151 GAAATGAGGAGAATTGTGAGTTTTGTTGGCGGTATTGATCTTTGTGATGGAAGATACGAC 1210 |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct 1138 GAAATGAGGAGAATTGTGAGCTTTGTTGGCGGTATTGATCTCTGTGATGGAAGATACGAC 1197 Query 1211 ACTCCGTTCCACTCCTTGTTCAGGACATTGGACACAGTCCACCATGATGACTTCCATCAA 1270 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1198 ACTCCGTTCCACTCCTTGTTCAGGACATTGGACACAGTCCACCATGATGACTTCCATCAA 1257 Query 1271 CCTAACTTCACTGGTGCTGCTATCACTAAAGGTGGTCCAAGGGAGCCTTGGCATGACATT 1330 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1258 CCTAACTTCACTGGTGCTGCTATCACTAAAGGTGGTCCAAGGGAGCCTTGGCATGACATC 1317 Query 1331 CACTCCCGTCTTGAAGGTCCAATTGCTTGGGATGTCATGTACAACTTCGAGCAGAGATGG 1390 |||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||| Sbjct 1318 CACTCCCGTCTTGAAGGTCCAATTGCCTGGGATGTCATGTATAATTTCGAGCAGAGATGG 1377 Query 1391 AGCAAGCAGGGTGGTAAAGACATTCTGGTTAAGTTGAGAGATCTTAGTGATATTATTATC 1450 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1378 AGCAAGCAGGGTGGTAAAGACATTCTGGTTAAGTTGAGAGATCTTGGTGATATTATTATC 1437 Query 1451 ACCCCTTCTCCTGTTATGTTCCAAGAGGACCACGATGTGTGGAATGTCCAATTGTTTAGG 1510 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1438 ACCCCTTCTCCTGTTATGTTCCAAGAGGACCATGATGTGTGGAATGTCCAATTGTTTAGA 1497 Query 1511 TCCATTGATGGAGGAGCTGCTGCTGGGTTTCCCGAGTCGCCTGAAGCTGCTGCGGAAGCC 1570 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1498 TCCATTGATGGTGGAGCTGCTGCTGGGTTTCCCGAGTCGCCTGAAGCTGCTGCTGAAGCC 1557 Query 1571 GGGCTTGTAAGTGGGAAAGATAACATCATTGATAGGAGTATCCAAGATGCTTACATTCAT 1630 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1558 GGGCTTGTAAGTGGGAAAGATAACATCATTGATAGGAGTATCCAAGATGCTTACATTCAC 1617 Query 1631 GCAATCAGACGTGCTAAGGATTTCATCTACGTTGAAAACCAGTACTTCCTTGGGAGTTCT 1690 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1618 GCAATCAGACGGGCCAAGGATTTCATCTACGTTGAAAACCAGTACTTCCTTGGGAGTTCT 1677 Query 1691 TTTGCTTGGGCAGCCGATGGTATTACTCCTGAGGACATCAATGCCCTGCACTTAATCCCA 1750 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1678 TTTGCTTGGGCCGCCGATGGTATTACTCCTGAGGACATCAATGCCCTGCACTTAATCCCA 1737 Query 1751 AAAGAGTTGTCGCTGAAGATAGTTAGCAAGATTGAGAAAGGAGAGAAGTTCAGGGTCTAT 1810 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct 1738 AAAGAGTTATCGCTGAAGATAGTTAGCAAGATCGAGAAAGGAGAGAAGTTCAGGGTGTAT 1797 Query 1811 GTTGTGGTTCCAATGTGGCCAGAAGGTCTCCCAGAGAGTGGATCAGTGCAAGCTATATTA 1870 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1798 GTTGTGGTCCCAATGTGGCCAGAAGGTCTCCCAGAGAGTGGATCAGTGCAAGCTATATTA 1857 Query 1871 GACTGGCAGAGGAGGACCATGGAGATGATGTACAAGGATGTGATTCAGGCTCTCAGGGCC 1930 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1858 GATTGGCAGAGGAGGACCATGGAGATGATGTACAAGGATGTGATTCAGGCTCTCAGGGCG 1917 Query 1931 CAGGGTCTTGAGGAAGATCCAAGAAACTATCTGACATTCTTCTGTCTTGGAAACCGTGAG 1990 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1918 CAGGGTCTTGAGGAAGATCCAAGAAACTATCTGACATTCTTCTGTCTTGGAAACCGTGAG 1977 Query 1991 GTCAAGAAAGATGGAGAGTATGAGCCTGCTGAGAAACCAGACCCCGACACTGATTACATG 2050 ||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||| Sbjct 1978 GTCAAGAAAGATGGAGAATATGAGCCTGCTGAGAAACCAGACCCCGACACAAATTATATG 2037 Query 2051 AGGGCGCAAGAAGCACGCCGTTTCATGATTTACGTCCACACCAAAATGATGATCGTTGAC 2110 |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 2038 AGGGCGCAAGAAGCCCGCCGCTTCATGATTTACGTCCACACCAAAATGATGATCGTTGAC 2097 Query 2111 GATGAATACATTATCATTGGGTCTGCTAACATCAACCAGAGGTCAATGGACGGTGCAAGA 2170 ||||| || ||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct 2098 GATGAGTATATTATTATCGGGTCTGCTAACATCAACCAGAGGTCAATGGACGGTGCAAGA 2157 Query 2171 GACTCTGAGATAGCAATGGGAGGTTATCAACCACATCACTTGTCCCATAGACAACCAGCT 2230 ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 2158 GACTCTGAGATAGCAATGGGAGGTTATCAACCACATCACCTGTCCTATAGACAACCAGCT 2217 Query 2231 CGTGGCCAGATCCATGGGTTTCGTATGTCACTCTGGTACGAACACCTGGGAATGCTCGAT 2290 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct 2218 CGTGGCCAGATCCATGGGTTCCGTATGTCACTCTGGTACGAACACCTGGGAATGCTAGAT 2277 Query 2291 GAAACCTTCCTCGATCCATCAAGCTTGGAATGCATTGAGAAAGTTAACCGCATTTCTGAC 2350 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 2278 GAAACCTTCCTCGATCCCTCAAGCTTGGAATGCATTGAGAAAGTTAACCGCATTTCTGAC 2337 Query 2351 AAGTATTGGGACTTTTACTCAAGTGAGTCACTCGAACATGACCTTCCTGGTCACTTGCTC 2410 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct 2338 AAGTATTGGGACTTTTACTCAAGTGAGTCACTTGAACATGACCTTCCCGGTCACTTGCTC 2397 Query 2411 CGCTACCCGATCGGTGTAGCCAGCGAAGGCGACATCACTGAGCTTCCAGGATTTGAATTC 2470 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 2398 CGCTACCCGATTGGTGTAGCTAGCGAAGGCGACATCACTGAGCTTCCAGGATTTGAATTC 2457 Query 2471 TTCCCGGACACAAAGGCCCGTATCCTCGGCACCAAATCAGACTACCTGCCTCCAATCCTT 2530 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2458 TTCCCGGACACAAAGGCCCGTATCCTCGGCACCAAATCAGACTACCTGCCTCCAATCCTT 2517 Query 2531 ACAACCTAATCTCACTAAGCATGTCAAGTAATGAtctctctctc-c-ctctct--GCTTT 2586 ||||||||| |||||| |||||| |||||||||||||||||| | |||||| ||||| Sbjct 2518 ACAACCTAACCTCACTGCGCATGTTGAGTAATGATCTCTCTCTCTCGCTCTCTCTGCTTT 2577 Query 2587 GCTGCTGTTGTAGCTTTGAATAAAACTTGAGTGTCTACCTTTAGAATTAAGAAGTCAAAT 2646 |||||||||||||||||||||||| || |||||||||||| ||||||||| |||| || | Sbjct 2578 GCTGCTGTTGTAGCTTTGAATAAA-CTCGAGTGTCTACCTGTAGAATTAATAAGTTAA-T 2635 Query 2647 GGTTGTTATGATGATGCA-CTTCTTT-ACCCCTTTGGTTTTTATATTCGTACAATGACGT 2704 ||||| | |||||||||| || |||| ||||||| |||||| |||||||||||||||||| Sbjct 2636 GGTTGGTGTGATGATGCAACT-CTTTTACCCCTT-GGTTTT-ATATTCGTACAATGACGT 2692 Query 2705 GGTGAGAGAATGTAGCTTTGTGATCTTGTTTTGTTGTTGTTATGTACCTTTGGACTTATG 2764 ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct 2693 GGTGAGAGAATGTAGCTTTGTGATCTTCTTTTGTTGTTGTTATGTACCTTTGAACTTATG 2752 Query 2765 AATCTTATATCTGATCCTTTTCTTTTTATT 2794 |||||||||||||||||||||||||||||| Sbjct 2753 AATCTTATATCTGATCCTTTTCTTTTTATT 2782 > Ahg914427 jgi|Araly1|914427|Al_scaffold_0001_4681 Length=2433 Score = 2106 bits (1140), Expect = 0.0 Identities = 2013/2431 (83%), Gaps = 74/2431 (3%) Strand=Plus/Plus Query 146 ATCTATGAAGTTGATGC-CCTCCATGGTGGTGGTGTTAG-GCAAGGCTTCCTT-GGCA-A 201 ||||||||||||||| | ||||||| || || | ||| | ||| || ||| || | Sbjct 40 ATCTATGAAGTTGAT-CGTCTCCATGCTGAAGGAGGTAGATC-AGG-TTTCTTAGG-ATC 95 Query 202 GATTCTGGCAAATGTAGAAGAGACGATTGGTGTTGGTAAAGGAGAAACACAG-TTGTATG 260 ||| || |||||||||||||| || ||||||||||| ||||||||||| ||| || || | Sbjct 96 GATACTAGCAAATGTAGAAGAAACAATTGGTGTTGGCAAAGGAGAAACTCAGCTT-TACG 154 Query 261 CGACGATTGATC-TGCAAAAAGCTAGAGTTGGGAGAACCAGGAAGATCAA-AAATGAACC 318 | || || |||| || | ||||| |||||||| ||||| ||||| || || ||| || || Sbjct 155 CTACAATCGATCTTG-AGAAAGCGAGAGTTGGAAGAACAAGGAAAAT-AACAAAGGAGCC 212 Query 319 TAAGAACCCAAAGTGGTATGAGTCGTTTCATATTTACTGTGCTCACTTGGCTTCTGATAT 378 || ||||||||||||| ||| || |||||||||||||||| |||| ||||| || | Sbjct 213 AAAAAACCCAAAGTGGTTTGAATCTTTTCATATTTACTGTGGTCACATGGCTAAACATGT 272 Query 379 CATCTTCACTGTTAAAGATGATAATCCCATTGGAGCTACCCTTATCGGAAGAGCTTACAT 438 || ||||||||||| |||| |||||| ||||| ||||| || |||||||||| ||| || Sbjct 273 TATTTTCACTGTTAAGGATGCTAATCCGATTGGCGCTACGCTGATCGGAAGAGGTTATAT 332 Query 439 TCCTGTTGATCA-AGTCATT-AACGGCGAGGAAGTGGATCAG-TGGGTTGAGATCTTGGA 495 |||||| || | | | || | || || ||||| || ||| |||||||| ||||| || Sbjct 333 TCCTGTGGAAGATA-T-TTTGCATGGAGAAGAAGTTGA-CAGATGGGTTGATATCTTAGA 389 Query 496 TAATGACAGAAACCCTATT-CAGGGAGGATCAAAGATTCATGTCAAGCTTCAATATTTCC 554 |||||| | |||||| ||| | |||||||||||||| ||||| || || ||||||||| Sbjct 390 TAATGATAAAAACCCCATTGC-TGGAGGATCAAAGATCCATGTGAAACTCCAATATTTCG 448 Query 555 ATGTTGAGGAGGATCGTAACTGGAACAT-G-GGTATCAAAAGTGCCAAGTTCCCTGGAGT 612 ||||||| ||||| |||||| | || | |||||||||||||| ||||| || ||||| Sbjct 449 GTGTTGAGAAGGATAAAAACTGG-A-ATCGAGGTATCAAAAGTGCTAAGTTTCCAGGAGT 506 Query 613 GCCATACACATTCTTCTCGCAGAGACA-AGGCTGCAAAGTTTCTCTGTACCAAGATGCTC 671 || |||||||||||||| |||||| | ||||||||||||||||||||| |||||||||| Sbjct 507 TCCTTACACATTCTTCTCTCAGAGA-AGAGGCTGCAAAGTTTCTCTGTATCAAGATGCTC 565 Query 672 ATATTCC-AGACAACTTTGTCCCTAGAATTCCTCTCGCTGGAGGGAAGAACTATGAGCCT 730 ||||||| || ||||||||||| | ||| |||||||| || || || ||||| ||||| Sbjct 566 ATATTCCTGGA-AACTTTGTCCCAAAAATCCCTCTCGCGGGTGGAAAAAACTACGAGCCA 624 Query 731 CAAAGATGTTGGGAGGATATTTTTGATGCTATTAGC-AATGCAAAACACTTGATCTACAT 789 ||||||||||||||||||| ||||| |||| | ||||||||||||||||| ||||| Sbjct 625 GGTCGATGTTGGGAGGATATTTTCGATGCCATTA-CTAATGCAAAACACTTGATTTACAT 683 Query 790 TACTGGTTGGTCTGTTTACGCTGAGATTGCTTTAGTGAGGGACTCGAGGAGGCCTAAGCC 849 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||| || | Sbjct 684 TACTGGTTGGTCTGTTTACACTGAGATTTCTTTAGTGAGGGACTCGAGGAGGCCAAAACA 743 Query 850 TGGAGGTGATGTGACCATTGGTGAGCTACTCAAGAAGAAGGCTAGTGAAGGTGTCAGGGT 909 ||||| ||||||||||||||||||||||||||||| || |||||||||||||| | ||| Sbjct 744 AGGAGGAGATGTGACCATTGGTGAGCTACTCAAGAAAAAAGCTAGTGAAGGTGTTAAGGT 803 Query 910 TCTTTTGCTTGTTTGGGATGACAGAACTTCTGTTGATGTGCTGAAGAAAGATGGGCTCAT 969 ||||||||||||||||||||||||| ||||||||| ||||||| |||||||| || || Sbjct 804 AATTTTGCTTGTTTGGGATGACAGAACGTCTGTTGATTTGCTGAAAAAAGATGGACTTAT 863 Query 970 GGCTACTCATGATGAAGAGACCGAGAATTTCTTCAGGGGAAGTGATGTCCATTGTATTCT 1029 ||| |||||||||||||| || |||||||| ||||| |||| || || | |||||| | Sbjct 864 GGCCACTCATGATGAAGAAACTGAGAATTTTTTCAGAGGAACCGACGTGAACTGTATTTT 923 Query 1030 GTGCCCTCGTAACCCGGATGACGGTGGTAGCATAGTCCAAAGTTTGCAGATCTCTACTAT 1089 ||| ||||||||||| ||||| ||||| ||||| ||||||| ||||| ||||| ||||| Sbjct 924 GTGTCCTCGTAACCCTGATGATGGTGGAAGCATTGTCCAAAACTTGCAAATCTCAACTAT 983 Query 1090 GTTCACGCATCATCAGAAA-ATCGTTGTTGTGGACAGCGAGATGCCAAGCAGAGGAGGAT 1148 |||||| ||||| || ||| || |||||||| ||||| || |||||||| | | ||||| Sbjct 984 GTTCACTCATCACCA-AAAGATTGTTGTTGTAGACAGTGAAATGCCAAGT-G-G-AGGAT 1039 Query 1149 CAGAAATGAGGA-GAATTGTGAGTTTTGTTGGCGGTATTGATCTTTGTGATGGAAGATAC 1207 || | || | || ||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct 1040 CA-AGATCAAGAAGAATTGTGAGTTTTGTTGGTGGTCTTGATCTTTGTGATGGAAGATAT 1098 Query 1208 GACACTCCGTTCCACTCCTTGTTCAGGACATTGGACACAGTCCACCATGATGACTTCCAT 1267 |||||||| || ||||||||||| || ||||||||||| | ||| || |||||||||||| Sbjct 1099 GACACTCCATTTCACTCCTTGTTTAGAACATTGGACACTGCCCATCACGATGACTTCCAT 1158 Query 1268 CAACCTAACTTCACTGGTGCTGCTATCACTAAAGGTGGTCCAAGGGAGCCTTGGCATGAC 1327 ||||| || |||||||| ||||| || || ||||| ||||| || ||||| ||||||||| Sbjct 1159 CAACCGAATTTCACTGGCGCTGCGATAACCAAAGGCGGTCCTAGAGAGCCATGGCATGAC 1218 Query 1328 ATTCACTCCCGTCTTGAAGGTCCAATTGCTTGGGATGTCATGTACAACTTCGAGCAGAGA 1387 ||||| | ||||||||||| || ||||||||||||||| |||| || || ||||||||| Sbjct 1219 ATTCATTGTCGTCTTGAAGGACCTATTGCTTGGGATGTCTTGTATAATTTTGAGCAGAGA 1278 Query 1388 TGGAGCA-AGCAGGGTGGTAAAGACATTCTGGTTAAGTTGAGAGATCTTAG-TGATATTA 1445 ||||| | | || ||||||||||| ||| ||||||| | |||||||| || |||||||| Sbjct 1279 TGGAGTAGA-CAAGGTGGTAAAGATATTTTGGTTAAAATAAGAGATCT-AGGTGATATTA 1336 Query 1446 TTATCACC-CCTTCTCCTGTTATGTTC-CAAGAGGACCACGATGTGTGGAATGTCCAATT 1503 | ||| || |||||||||||| ||||| | ||||| ||||||||||||||||| || || Sbjct 1337 TCATC-CCGCCTTCTCCTGTTTTGTTCTCG-GAGGATCACGATGTGTGGAATGTTCAGTT 1394 Query 1504 GTTTAGGTCCATTGATGGAGGAGCTGCTGCTGGGTTTCCCGAGTCGCCTGAAGCTGCTGC 1563 |||||| ||||||||||| ||||| |||||||| ||||| || || ||||||||||| || Sbjct 1395 GTTTAGATCCATTGATGGTGGAGCAGCTGCTGGATTTCCTGACTCACCTGAAGCTGCAGC 1454 Query 1564 GGAAGCCGGGCTTGTAAGTGGGAAAGATAACATCATTGATAGGAGTATCCAAGATGCTTA 1623 |||||| || ||||| || || |||||||| || |||||||||||||| ||||||||||| Sbjct 1455 GGAAGCAGGTCTTGTGAGCGGAAAAGATAATATAATTGATAGGAGTATTCAAGATGCTTA 1514 Query 1624 CATTCATGCAATCAGACGTGCTAAGGATTTCATCTACGTTGAAAACCAGTACTTCCTTGG 1683 |||||| || || ||||| ||||| ||||||||||| | |||||||||||||||||||| Sbjct 1515 CATTCACGCGATTAGACGAGCTAAAGATTTCATCTATATCGAAAACCAGTACTTCCTTGG 1574 Query 1684 GAGTTCTTTTGCTTGG-GCAGCCGATGGTATTACTCCTGAGGACATCAATGCCCTGCACT 1742 || |||||||||||| || || ||||| || | || ||||| |||||||| ||||| | Sbjct 1575 AAGCTCTTTTGCTTGGAGC-GCTGATGGAATCAAACCAGAGGAAATCAATGCTCTGCATT 1633 Query 1743 TAATCCCAAAAGAGTTGTCGCTGAAGATAGTTAGCAAGATTGA-GAAAGGAGAGAAGTTC 1801 | || ||||| ||| | || ||||||| ||||||||||| | | | || |||||||| Sbjct 1634 TGATTCCAAAGGAGCTATCTTTGAAGATTGTTAGCAAGATCAAAGCAGGG-GAGAAGTTT 1692 Query 1802 AGGGTCTATGTTGTGGTTCCAATGTGGCCAGAAGGTC-TCCCAGAGAGTGGATCAGTGCA 1860 | |||||||||||| |||||||||||||| ||||| | | || |||||||||||||| || Sbjct 1693 AAGGTCTATGTTGTTGTTCCAATGTGGCCTGAAGG-CATTCCTGAGAGTGGATCAGTCCA 1751 Query 1861 AGCTATATTAGACTGGCAGAGGAGGACCATGGAGATGATGTACAAGGATGTGATTCA-GG 1919 ||||||||| || ||||||| || || ||||||||||||||||| ||||| || || || Sbjct 1752 AGCTATATTGGATTGGCAGAAAAGAACAATGGAGATGATGTACAAAGATGTAAT-CAAGG 1810 Query 1920 CTCTCAGGGCC-CAGGGTCTTGAGG-A-AG-ATCCAAGAAACTATCTGACATTCTTCTGT 1975 | || || | | ||| || |||| | || |||| || | ||||| ||||||||||| Sbjct 1811 CACTTAGAGAAAC-GGGACTCGAGGGAGAGGATCCGCGAGATTATCTAACATTCTTCTGC 1869 Query 1976 CTTGGAAACCGTGAGGTCAAGAAAGATGGAGAGTATGAGCCTGCTGAGAAACCAGACCCC 2035 || |||||||| || |||||||| |||||||||||||||||| | |||||||| || || Sbjct 1870 CTCGGAAACCGAGAAGTCAAGAAGGATGGAGAGTATGAGCCTTCAGAGAAACCTGAACCG 1929 Query 2036 GACACTGATTACATGAGGGCGCAAGAAGCACGCCGTTTCATGATTTACGTCCACACCAAA 2095 |||||||| || || | || |||||||||||||| |||||||| || || ||||| ||| Sbjct 1930 GACACTGACTATATCCGAGCACAAGAAGCACGCCGCTTCATGATCTATGTTCACACTAAA 1989 Query 2096 ATGATGATCGTTGACGATGAATACATTATCATTGGGTCTGCTAACATCAACCAGAGGTCA 2155 |||||||| ||||||||||| |||||||| || || || || || ||||||||||||||| Sbjct 1990 ATGATGATAGTTGACGATGAGTACATTATAATCGGATCAGCAAATATCAACCAGAGGTCA 2049 Query 2156 ATGGACGGTGCAAGAGACTCTGAGATAGCAATGGGAGGTTATCAACCACATCA-CTTGTC 2214 ||||| |||||||||||||| |||||||| |||||||| ||||||||| |||| || || Sbjct 2050 ATGGATGGTGCAAGAGACTCAGAGATAGCGATGGGAGGCTATCAACCATATCATCTA-TC 2108 Query 2215 C-CATAGACAACCAGCTCGTGGCCAGATCCATGGGTTTCGTATGTCACTCTGGTACGAAC 2273 | || |||||||||||||| || || |||||||| || || ||||| | ||||| |||| Sbjct 2109 CACA-AGACAACCAGCTCGAGGTCAAATCCATGGATTCCGCATGTCGTTGTGGTATGAAC 2167 Query 2274 ACCTGGGAATGCTCGATGAAACCTTCCTCGATCCATCAAGCTTGGAATGCATTGAGAAAG 2333 | | ||||||||||||||||| |||||||||||||| ||| ||||| || | |||| Sbjct 2168 ATTTAGGAATGCTCGATGAAACATTCCTCGATCCATCGAGCCAAGAATGTATCCAAAAAG 2227 Query 2334 TTAACCGCATTTCTGACAAGTATTGGGA-CTTTTACTCAAGTGAGTCACTCGAACATGAC 2392 ||||||| || |||| ||||||||||| |||| |||||||||||||||| |||||||| Sbjct 2228 TTAACCGTGTTGCTGATAAGTATTGGGATCTTT-ACTCAAGTGAGTCACTTGAACATGAT 2286 Query 2393 CTTCCTGGTCA-CTTGCTCCGCTACCCGATCGGTGTAGCCAGCGAAGGCGA-CATCACTG 2450 ||||| ||||| || || ||||||||||||||| | || || ||||| || |||||||| Sbjct 2287 CTTCCCGGTCATCTA-CTTCGCTACCCGATCGGTATTGCTAGTGAAGG-GAACATCACTG 2344 Query 2451 AGCTTCC-AGGATTTGAATTCTT-CCCGGACACAAAGGCCCGTATCCTCGGCACCAAATC 2508 ||||||| || || ||||||||| |||| ||||||| ||||||||||| || | ||||| Sbjct 2345 AGCTTCCCAG-ATGTGAATTCTTTCCCG-ACACAAAAGCCCGTATCCTTGGTGCTAAATC 2402 Query 2509 AGACTACCTGCCTCCAATCCTTACAACCTAA 2539 || ||| ||||||| || |||||||||||| Sbjct 2403 TGATTACATGCCTCCCATTCTTACAACCTAA 2433 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 106043242080 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5