BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G16410.1 Length=2106 Score E Sequences producing significant alignments: (Bits) Value Ahg929465 jgi|Araly1|929465|scaffold_301922.1 2001 0.0 Ahg479094 jgi|Araly1|479094|fgenesh2_kg.3__1795__AT3G16410.1 1550 0.0 Ahg497400 jgi|Araly1|497400|fgenesh2_kg.348__1__AT2G33070.1 1546 0.0 Ahg482246 jgi|Araly1|482246|fgenesh2_kg.4__1306__AT2G33070.1 1546 0.0 Ahg929469 jgi|Araly1|929469|scaffold_301926.1 525 5e-148 Ahg930637 jgi|Araly1|930637|scaffold_303094.1 339 7e-92 > Ahg929465 jgi|Araly1|929465|scaffold_301922.1 Length=1450 Score = 2001 bits (1083), Expect = 0.0 Identities = 1317/1430 (92%), Gaps = 15/1430 (1%) Strand=Plus/Plus Query 515 GCCAAAAAGCTAGAAGCAAAGGGTGGTGACACGGGAGATATATGGGATGATGGTGTTTAC 574 ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct 24 GCCAAAAAGCTAGAAGCAAAGGGTGGTGAGACGGGAGATGTATGGGATGATGGTGTTTAC 83 Query 575 GATAATGTTAGAAAGGTATATGTAGGGCAAGCCCAATATGGTATAGCCTTCGTCAAGTTT 634 || |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 84 GAAAATGTTAGAAAGGTATATGTAGGGCAAGGCCAATATGGTATAGCCTTCGTCAAGTTT 143 Query 635 GAGTATGTCAATGGTTCTCAAGTGGTTGTTGGAGATGAACATGGAAAGAAGACAGAGCTA 694 ||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||| Sbjct 144 GAGTATGTCAATGGTTCTCAAGTAGTTGTTGGAGATGAACATGGAACGAAGACAAAGCTA 203 Query 695 GGAGTTGAAGAGTTTGAGATTGATGCGGATGACTACATCGTATACGTGGAAGGATACCGT 754 |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 204 GGAGTTGATGAGTTTGAGATTGATGCGGATGACTACATCGTATACGTGGAAGGTTACCGT 263 Query 755 GAGAAAGTTAATGGTATGACCTCAGAGATGATCACTTTTCTTTCATTCAAGACTTATAAA 814 ||||||||||| | |||||||||||| |||||||| ||||||||||||||||||| || | Sbjct 264 GAGAAAGTTAACGATATGACCTCAGAAATGATCACGTTTCTTTCATTCAAGACTTTTACA 323 Query 815 GGCAAAACCTCTCAGCCTATCGAACA-AAGACCTGGTATTAAGTTTGTGCTACAAGGTGG 873 |||||||||||||| ||||||||| | ||||||||| |||||||||||||||||||||| Sbjct 324 GGCAAAACCTCTCATCCTATCGAA-AGAAGACCTGGGGTTAAGTTTGTGCTACAAGGTGG 382 Query 874 AAAAATTGTTGGGTTTCACGGACGTTCGACCGACGTTCTAGACTCCCTCGGGGCTTATAT 933 |||| | |||||||||||||||||||| |||||||||||| ||||||||||||| || | Sbjct 383 AAAAGTCGTTGGGTTTCACGGACGTTCCACCGACGTTCTACACTCCCTCGGGGCCTACGT 442 Query 934 TTCATTGTCGCCCACT-CCAAACTTGCATGGAAAGTGGACAAAGGTGGATG-AAAATGGA 991 ||| ||| || ||||| ||||| |||| ||||||||||| |||||||| | |||| ||| Sbjct 443 TTCTTTGCCGTCCACTCCCAAA-TTGCTTGGAAAGTGGATTAAGGTGGA-GCAAAAAGGA 500 Query 992 GATGGTCCAGGGCTAAGATGCTCGCATGACATAGCACAGGTAGGAAACAAGATTTACTCT 1051 || |||||||||||||||||||| |||| ||||||||| |||| |||||||||||||| Sbjct 501 GAAGGTCCAGGGCTAAGATGCTCACATGGCATAGCACAAATAGGTAACAAGATTTACTCC 560 Query 1052 TTTGGTGGTGAGTTCACACCAAATCAGCCCATCGACAAACACCTTTACGTCTTTGACATC 1111 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 561 TTTGGTGGTGAGTTCACACCAAATCAGCCCATCGACAAACACCTTTACGTCTTTGACCTC 620 Query 1112 GAGAGCCGGACTTGGTCCATTTCTCCAGCCACGGGAGACATTCCA-ACCCTCTCTTGCCT 1170 |||| ||||||||||||||||||||||||||| |||||| ||||| ||| |||||||| | Sbjct 621 GAGACCCGGACTTGGTCCATTTCTCCAGCCACCGGAGACGTTCCACACC-TCTCTTGCTT 679 Query 1171 AGGTGTCTGTATGGTGTCAATAGGATCGACCCTCTATGTCTTTGGAGGCCGAGACGCTTC 1230 ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 680 AGGTGTCCGTATGGTGTCAATAGGGTCGACCCTCTATGTCTTTGGAGGCCGAGACGCTTC 739 Query 1231 ACGTCAATACAACGGTTTCTACTCGTTTGACACGACCACAAACGAGTGGAAACTGCTAAC 1290 ||| || ||||| ||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct 740 ACGCCAGTACAATGGTTTCTACTCATTTGACACAACCACAAACGAGTGGAAACTGCTAAC 799 Query 1291 TCCGGTCGAAGAAGGACCCACTCCTCGTAGTTTCCACTCAATGGCAGCCGATGAGGAAAA 1350 |||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct 800 TCCGGTAGAAGAAGGACCAACTCCTCGTAGTTTCCACTCGATGGCAGCCGATGAGGAAAA 859 Query 1351 CGTTTACGTTTTCGGTGGAGTGAGTGCTACGGCACGACTCAATACACTAGACTCTTACAA 1410 |||||||||||||||||||||| |||||| || |||| |||| ||||||||||||||||| Sbjct 860 CGTTTACGTTTTCGGTGGAGTGGGTGCTAGGGAACGAATCAAGACACTAGACTCTTACAA 919 Query 1411 CATCGTTGATAAGAAGTGGTTTCATTGTTCGACTCCAGGAGATTCCCTTACCGCAAGAGG 1470 |||||||||||||||||||||||| || |||||||||||||||||| ||| | |||||| Sbjct 920 CATCGTTGATAAGAAGTGGTTTCAGTGCTCGACTCCAGGAGATTCCTTTAGCATAAGAGG 979 Query 1471 AGGAGCAGGGCTCGAAGTGGTGCAAGGGAAGGTATGGGTTGTGTATGGGTTTAACGGATG 1530 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct 980 AGGAGCAGGGCTCGAAGTGGTGCAAGGGAAAGTATGGGTTGTGTATGGATTTAACGGATG 1039 Query 1531 TGAAGTAGATGATGTTCATTACTACGATCCTGTTCAAGACAAGT-GGACACAAGTGGAAA 1589 |||| ||||||||||||||| ||||||||||| | |||||| || |||||| |||||||| Sbjct 1040 TGAAATAGATGATGTTCATTTCTACGATCCTGCTGAAGACA-GTTGGACACGAGTGGAAA 1098 Query 1590 CATTCGGTGTGAGGCCTTCCGAAAGAAGTGTATTCGCTAGTGCGGCTCTTGGGAAACACA 1649 |||| |||||||| ||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 1099 CATTTGGTGTGAGACCTTCCGAAAGGAGTGTATTCGCTAGTGCGGCTGTTGGGAAACACA 1158 Query 1650 TTGTGATTTTTGGAGGTGAAATTGCGATGGACCCGCTAGCTCACGTGGGTCCAGGTCAAT 1709 ||||||| || |||||||| |||||||||||||| ||||||||||| ||||| ||||||| Sbjct 1159 TTGTGATGTTCGGAGGTGAGATTGCGATGGACCCACTAGCTCACGTAGGTCCGGGTCAAT 1218 Query 1710 TGACCGATGGAACTTTTGCATTGGACACAGAGACGTTGCAATGGGAGAGGCTGGATAAGT 1769 ||| |||||| ||||| | ||||| |||||||||||||||||||||||| | ||||||| Sbjct 1219 TGATCGATGGGACTTTCACGTTGGATACAGAGACGTTGCAATGGGAGAGGTTAGATAAGT 1278 Query 1770 TTGGTGGAGAGGAAGAGACTCCGAGTAGCAGAGGATGGACCGCGTCCACAACTGCGACCA 1829 || ||| |||||| || || | |||||||||||||||||||||||||||||||| ||||| Sbjct 1279 TTAGTGAAGAGGA-GACAC-C-GAGTAGCAGAGGATGGACCGCGTCCACAACTGGGACCA 1335 Query 1830 TTGGTGGCAAGAAAGGACTTGTGATGCATGGTGGTAAAGCTCCAACCAATGACCGGTTTG 1889 ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1336 TTGATGGTAAGAAAGGACTTGTGATGCATGGTGGTAAAGCTCCAACCAATGACCGGTTTG 1395 Query 1890 ATGATCTCTTCTTTTACGGAATTGACTCTGCCTAATTAAG-GCAGATTTG 1938 |||| ||||||||||||||||| ||||||||||||||||| || |||||| Sbjct 1396 ATGACCTCTTCTTTTACGGAATCGACTCTGCCTAATTAAGCGC-GATTTG 1444 > Ahg479094 jgi|Araly1|479094|fgenesh2_kg.3__1795__AT3G16410.1 Length=1634 Score = 1550 bits (839), Expect = 0.0 Identities = 1038/1132 (92%), Gaps = 22/1132 (2%) Strand=Plus/Plus Query 977 GTGGATG-AAAATGGAGATGGTCCAGGGCTAAGATGCTCGCATGACATAGCACAGGTAGG 1035 ||||| | |||| ||||| |||||||||||||||||||| |||| ||||||||||||||| Sbjct 516 GTGGA-GCAAAAAGGAGAAGGTCCAGGGCTAAGATGCTCACATGGCATAGCACAGGTAGG 574 Query 1036 AAACAAGATTTACTCTTTTGGTGGTGAGTTCACACCAAATCAGCCCATCGACAAACACCT 1095 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 575 TAACAAGATTTACTCCTTTGGTGGTGAGTTCACACCAAATCAGCCCATCGACAAACACCT 634 Query 1096 TTACGTCTTTGACATCGAGAGCCGGACTTGGTCCATTTCTCCAGCCACGGGAGACATTCC 1155 ||||||||||||| |||||| ||||||||||||||| ||||||||||| |||||| |||| Sbjct 635 TTACGTCTTTGACCTCGAGACCCGGACTTGGTCCATCTCTCCAGCCACCGGAGACGTTCC 694 Query 1156 AAC-CCTCTCTTGCCTAGGTGTCTGTATGGTGTCAATAGGATCGACCCTCTATGTCTTTG 1214 || |||||||||| |||||||| ||||||||||| |||||||||||||||| ||||||| Sbjct 695 -ACACCTCTCTTGCTTAGGTGTCCGTATGGTGTCAGTAGGATCGACCCTCTACGTCTTTG 753 Query 1215 GAGGCCGAGACGCTTCACGTCAATACAACGGTTTCTACTCGTTTGACACGACCACAAACG 1274 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||| Sbjct 754 GAGGCCGAGACGCTTCACGCCAATACAACGGTTTCTACTCATTTGACACGACCACACACG 813 Query 1275 AGTGGAAACTGCTAACTCCGGTCGAAGAAGGACCCACTCCTCGTAGTTTCCACTCAATGG 1334 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 814 AGTGGAAACTGCTAACTCCGGTCGAAGAAGGACCCACTCCTCGTAGTTTCCACTCGATGG 873 Query 1335 CAGCCGATGAGGAAAACGTTTACGTTTTCGGTGGAGTGAGTGCTACGGCACGACTCAATA 1394 |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| | Sbjct 874 CAGCCGATGAGGAAAACGTTTACGTTTTCGGTGGAGTGAGTGCTACGGCAAGGCTCAAGA 933 Query 1395 CACTAGACTCTTACAACATCGTTGATAAGAAGTGGTTTCATTGTTCGACTCCAGGAGATT 1454 |||||||||||||||||||||||||||||||||||||||| || |||||||| ||| | Sbjct 934 CACTAGACTCTTACAACATCGTTGATAAGAAGTGGTTTCAGTGCTCGACTCCCTTAGAGT 993 Query 1455 CCCTTACCGCAAGAGGAGGAGCAGGGCTCGAAGTGGTGCAAGGGAAGGTATGGGTTGTGT 1514 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 994 CCCTTACCGCAAGAGGAGGAGCAGGGCTCGAAGTGGTGAAAGGGAAGGTATGGGTTGTGT 1053 Query 1515 ATGGGTTTAACGGATGTGAAGTAGATGATGTTCATTACTACGATCCTGTTCAAGACAAGT 1574 |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct 1054 ATGGATTTAACGGATGTGAAGTAGATGATGTTTATTACTACGATCCTGTTGAAGACAAGT 1113 Query 1575 GGACACAAGTGGAAACATTCGGTGTGAGGCCTTCCGAAAGAAGTGTATTCGCTAGTGCGG 1634 |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct 1114 GGACACAAGTGGAAACATTCGGTGTGAGACCTTCCGAAAGGAGTGTATTCGCTAGTGCGG 1173 Query 1635 CTCTTGGGAAACACATTGTGATTTTTGGAGGTGAAATTGCGATGGACCCGCTAGCTCACG 1694 || ||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||| Sbjct 1174 CTGTTGGGAAACACATTGTGATGTTTGGAGGTGAGATTGCGATGGACCCACTAGCTCACG 1233 Query 1695 TGGGTCCAGGTCAATTGACCGATGGAACTTTTGCATTGGACACAGAGACGTTGCAATGGG 1754 |||||| ||||||||||||||||| |||||||| || || || |||||||||||||||| Sbjct 1234 CGGGTCCGGGTCAATTGACCGATGGGACTTTTGCGTTAGATACGGAGACGTTGCAATGGG 1293 Query 1755 AGAGGCTGGATAAGTTTGGTGGAGAGGAAGAGACTCCGAGTAGCAGAGGATGGACCGCGT 1814 ||||||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||| Sbjct 1294 AGAGGCTGGATAAGTTTAGTGAAGAGGAGGAGACTCCGAGTAGCAGAGGATGGACCGCGT 1353 Query 1815 CCACAACTGCGACCATTGGTGGCAAGAAAGGACTTGTGATGCATGGTGGTAAAGCTCCAA 1874 |||| |||| |||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct 1354 CCACGACTGGGACCATTGATGGTAAGAAAGGACTTGTGATGCATGGTGGTAAAGCTCCAA 1413 Query 1875 CCAATGACCGGTTTGATGATCTCTTCTTTTACGGAATTGACTCTGCCT-AATTAAGGCAG 1933 ||||||||||||||||||||||||||||||||||||| |||||| || |||| | | | Sbjct 1414 CCAATGACCGGTTTGATGATCTCTTCTTTTACGGAATCCACTCTGTCTGAATTCTG-C-G 1471 Query 1934 ATTTGGTGAT-GAACGT-T-TGTGATGCAATAAGGGAAGGGTCTTGATACCACCATATTA 1990 |||| || | | || | ||||||||||||||| | ||||| |||||||||||||| | Sbjct 1472 -TTTG-TGTTTGTGTGTGTGTGTGATGCAATAAGGCAGGGGTCGTGATACCACCATATGA 1529 Query 1991 TCATTCGTCAGCTTG-TCCATTT-TGTTGATGttttttttttCCTAAACGTTTTCTATAT 2048 || ||| |||||||| || |||| | ||||| |||||||||| ||||||||| ||||||| Sbjct 1530 TCCTTC-TCAGCTTGCTC-ATTTATTTTGATTTTTTTTTTTTTCTAAACGTTGTCTATAT 1587 Query 2049 GTTTAATTGTTTTATGTTTCGTGGTT-TATCCAATAAATTGTTTATTTTCTT 2099 |||| |||| | |||||||| || ||||||||||||||||||||||||| Sbjct 1588 GTTT----GTTTCACGTTTCGTG-TTGTATCCAATAAATTGTTTATTTTCTT 1634 Score = 608 bits (329), Expect = 5e-173 Identities = 412/451 (91%), Gaps = 10/451 (2%) Strand=Plus/Plus Query 519 AAAAGCTAGAAGCAAAGGGTGGTGACACGGGAGATATATGGGATGATGGTGTTTACGATA 578 ||||||||||||||||||||||||| || |||||| ||||||||||||||| |||||| | Sbjct 28 AAAAGCTAGAAGCAAAGGGTGGTGAGACAGGAGATGTATGGGATGATGGTGCTTACGAAA 87 Query 579 ATGTTAGAAAGGTATATGTAGGGCAAGCCCAATATGGTATAGCCTTCGTCAAGTTTGAGT 638 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 88 ATGTTAGAAAGGTATATGTAGGGCAAGGCCAATATGGTATAGCCTTCGTCAAGTTTGAGT 147 Query 639 ATGTCAATGGTTCTCAAGTGGTTGTTGGAGATGAACATGGAAAGAAGACAGAGCTAGGAG 698 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 148 ATGTCAATGGTTCTCAAGTGGTTGTTGGAGATGAACATGGAAAAAAGACAGAGCTAGGAG 207 Query 699 TTGAAGAGTTTGAGATTGATGCGGATGACTACATCGTATACGTGGAAGGATACCGTGAGA 758 |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 208 TTGAGGAGTTTGAGATTGATGCGGATGACTACATCGTATACGTGGAAGGTTACCGTGAGA 267 Query 759 AAGTTAATGGTATGACCTCAGAGATGATCACTTTTCTTTC-ATTCAAGACTTATAAAGGC 817 ||||||| | |||||||||||| |||||||| |||||||| || |||||||| ||||||| Sbjct 268 AAGTTAACGATATGACCTCAGAAATGATCACGTTTCTTTCTAT-CAAGACTTTTAAAGGC 326 Query 818 AAAACCTCTCAGCCTATCGAACA-AAGACCTGGTATTAAGTTTGTGCTACAAGGTGGAAA 876 ||||||||||| ||||||||| | ||||||||| |||||||||||||||| |||||||| Sbjct 327 AAAACCTCTCATCCTATCGAA-AGAAGACCTGGGGTTAAGTTTGTGCTACACGGTGGAAA 385 Query 877 AATTGTTGGGTTTCACGGACGTTCGACCGACGTTCTAGACTCCCTCGGGGCTTATATTTC 936 ||| |||||||||||||||||||| |||| | ||| ||||||||||||| || |||| Sbjct 386 AATCGTTGGGTTTCACGGACGTTCCACCG---T-CTACACTCCCTCGGGGCCTACGTTTC 441 Query 937 ATTGTCGCCCACTCC-AAACTTGCATGGAAA 966 ||| || ||||||| ||| || | |||||| Sbjct 442 TTTGCCGTCCACTCCCAAA-TTACTTGGAAA 471 > Ahg497400 jgi|Araly1|497400|fgenesh2_kg.348__1__AT2G33070.1 Length=1563 Score = 1546 bits (837), Expect = 0.0 Identities = 1228/1419 (87%), Gaps = 18/1419 (1%) Strand=Plus/Plus Query 513 ATGCCA-AAAAGCTAGAAGCAAAGGGTGGTGACACGGGAGATATATGGGATGATGGTGT- 570 ||| || ||||| | ||||||||||||||||| | |||||| |||||||||||||| | Sbjct 134 ATGGCACAAAAGGTGGAAGCAAAGGGTGGTGAGATAGGAGATGTATGGGATGATGGT-TC 192 Query 571 TTACGATAATGTTAGAAAGGTATATGTAGGGCAAGCCCAATATGGTATAGCCTTCGTCAA 630 |||||| ||||||||| ||||| |||||||||| | || ||||||| ||||||||||| Sbjct 193 TTACGACGGTGTTAGAAAAGTATACGTAGGGCAAGGCGAAGATGGTATCGCCTTCGTCAA 252 Query 631 GTTTGAGTATGTCAATGGTTCTCAAGTGGTTGTTGGAGATGAACATGGAAAGAAGACAGA 690 |||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||| Sbjct 253 GTTTGAGTATGTCAATGGTTCTCAAGTGGTTGTTGGCGATGAACGTGGGAAGAAGACTTT 312 Query 691 GCTAGGAGTTGAAGAGTTTGAGATTGATGCGGATGACTACATCGTATACGTGGAAGGATA 750 |||||||| ||| ||||||||| ||||||| ||||||||||| |||||||||||||| || Sbjct 313 GCTAGGAGCTGAGGAGTTTGAGGTTGATGCAGATGACTACATAGTATACGTGGAAGGTTA 372 Query 751 CCGTGAGAAAGTTAAT--GGTAT-GACCTCAGAGATGATCACTTTTCTTTCATTCAAGAC 807 | |||||||||| | ||| | || |||||| ||| | |||| | |||||||| Sbjct 373 TCATGAGAAAGTTTTTGGGGTCTCAACAAAAGAGATCATCTCAACTCTTACGTTCAAGAC 432 Query 808 TTATAAAGGCAAAACCTCTCAGCC-TATCGAACAAAGAC-CTGGTATTAAGTTTGTGCTA 865 ||||||||||||||| |||| ||| | | | | | | | | || | |||||||| || Sbjct 433 TTATAAAGGCAAAACTTCTCCGCCGT-TTGGA-ATCGTCTCCGGGACCAAGTTTGTCCTC 490 Query 866 CAAGGTGGAAAAATTGTTGGGTTTCACGGACGTTCGACCGACGTTCTAG-ACTCCCTCGG 924 |||||||| ||||| |||||||||||||||||||| || || ||| | | |||| || || Sbjct 491 CAAGGTGGCAAAATCGTTGGGTTTCACGGACGTTCCACTGATGTT-TTGCACTCACTTGG 549 Query 925 GGCTTATATTTCATTGTCGCCCACTCCAAACTTGCATGGAAAGTGGACAAAGGTGGATG- 983 || |||||||| ||| || |||||||||| |||| ||||||||||| ||||||||| | Sbjct 550 AGCCTATATTTCTTTGCCGTCCACTCCAAAATTGCGTGGAAAGTGGATAAAGGTGGA-GC 608 Query 984 AAAATGGAGATGGTCCAGGGCTAAGATGCTCGCATGACATAGCACAGGTAGGAAACAAGA 1043 |||| ||||| |||||||||| ||||||||| |||||||||||||| ||||||||||||| Sbjct 609 AAAAAGGAGAGGGTCCAGGGCCAAGATGCTCACATGACATAGCACAAGTAGGAAACAAGA 668 Query 1044 TTTACTCTTTTGGTGGTGAGTTCACACCAAATCAGCCCATCGACAAACACCTTTACGTCT 1103 ||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct 669 TTTACTCCTTTGGTGGTGAGCTCACACCAAATCAGCCCATCGACAAACACCTTTATGTCT 728 Query 1104 TTGACATCGAGAGCCGGACTTGGTCCATTTCTCCAGCCACGGGAGACATTCCAACCCTCT 1163 | ||| |||||| ||||||||||||||||||||||||||| |||||| |||||| ||||| Sbjct 729 TCGACCTCGAGACCCGGACTTGGTCCATTTCTCCAGCCACCGGAGACGTTCCAAACCTCT 788 Query 1164 CTTGCCTAGGTGTCTGTATGGTGTCAATAGGATCGACCCTCTATGTCTTTGGAGGCCGAG 1223 ||||| |||| ||| ||||||||||||| ||||| | ||||||||||||||||||||||| Sbjct 789 CTTGCTTAGGCGTCCGTATGGTGTCAATTGGATCAAGCCTCTATGTCTTTGGAGGCCGAG 848 Query 1224 ACGCTTCACGTCAATACAACGGTTTCTACTCGTTTGACACGACCACA-AACGAGTGGAAA 1282 |||||||||| |||||||||| |||||||||||||| |||| || | |||||||||||| Sbjct 849 ACGCTTCACGAAAATACAACGGCTTCTACTCGTTTGATACGATCA-AGAACGAGTGGAAA 907 Query 1283 CTGCTAACTCCGGTCGAAGAAGGACCCACTCCTCGTAGTTTCCACTCAATGGCAGCCGAT 1342 |||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||| Sbjct 908 CTGCTAACTCCGGTCGAACAAGGACCCACTCCTCGTAGCTTCCACTCGATGGCAGCCGAT 967 Query 1343 GAGGAAAACGTTTACGTTTTCGGTGGAGTGAGTGCTACGGCACGACTCAATACACTAGAC 1402 ||| |||||||||||||||||||||||||||| ||||||| || ||||| ||||||||| Sbjct 968 GAGAAAAACGTTTACGTTTTCGGTGGAGTGAGCGCTACGGTTCGGCTCAAGACACTAGAC 1027 Query 1403 TCTTACAACATCGTTGATAAGAAGTGGTTTCATTGTTCGACTCCAGGAGATTCCCTTACC 1462 ||||||||||||||||| | |||||| |||| |||||||| || |||| |||| ||| | Sbjct 1028 GCTTACAACATCGTTGATCACAAGTGGGTTCAGTGTTCGACCCCGGGAGGTTCCTTTAGC 1087 Query 1463 GCAAGAGGAGGAGCAGGGCTCGAAGTGGTGCAAGGGAAGGTATGGGTTGTGTATGGGTTT 1522 |||||||||||| |||||||||||||| |||||||||||||||||||||||||| || Sbjct 1088 ATAAGAGGAGGAGCCGGGCTCGAAGTGGTACAAGGGAAGGTATGGGTTGTGTATGGATTC 1147 Query 1523 AACGGATGTGAAGTAGATGATGTTCATTACTACGATCCTGTTCAAGACAAGTGGACACAA 1582 |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1148 AACGGATGTGAAGTTGATGATGTTCATTGCTACGATCCTGTTCAAGACAAGTGGACACAA 1207 Query 1583 GTGGAAACATTCGGTGTGAGGCCTTCCGAAAGAAGTGTATTCGCTAGTGCGGCTCTTGGG 1642 |||||||| ||||||| || ||||| | || ||||| ||||||||||||| | ||||| Sbjct 1208 GTGGAAACGTTCGGTGAGAAGCCTTGTGCGAGGAGTGTGTTCGCTAGTGCGGTTGTTGGG 1267 Query 1643 AAACACATTGTGATTTTTGGAGGTGAAATTGCGATGGACCCGCTAGCTCACGTGGGTCCA 1702 ||| || || |||| ||||||||||| || ||||||||||| |||||||| |||||| Sbjct 1268 AAATACCTTTTGATCTTTGGAGGTGAGATAGCGATGGACCCAAAAGCTCACGAGGGTCCG 1327 Query 1703 GGTCAATTGACCGATGGAACTTTTGCATTGGACACAGAGACGTTGCAA-TGGGAGAGGCT 1761 |||||||||| | ||| |||||||| || || |||||||||||| || ||||||| ||| Sbjct 1328 GGTCAATTGAGTGGTGGGACTTTTGCGTTTGATACAGAGACGTTG-AAGTGGGAGAAGCT 1386 Query 1762 GGATAAGTTTGGTGGAGAGGAAGAGACTCCGAGTAGCAGAGGATGGACCGCGTCCACAAC 1821 |||||||||||||| ||||||||||||||| |||| |||||||||| | |||||||| || Sbjct 1387 GGATAAGTTTGGTGAAGAGGAAGAGACTCCAAGTATCAGAGGATGGTCTGCGTCCACGAC 1446 Query 1822 TGCGACCATTGGTGGCAAGAAAGGACTTGTGATGCATGGTGGTAAAGCTCCAACCAATGA 1881 || |||||||| ||| ||||||||||| ||||||| |||||| ||||||| ||| ||||| Sbjct 1447 TGGGACCATTGATGGTAAGAAAGGACTGGTGATGCTTGGTGGGAAAGCTCAAACTAATGA 1506 Query 1882 CCGGTTTGATGATCTCTTCTTTTACGGAATTGACTCTGC 1920 ||||||| ||||||||||||||| ||| |||||||||| Sbjct 1507 TCGGTTTGGTGATCTCTTCTTTTATGGAGTTGACTCTGC 1545 > Ahg482246 jgi|Araly1|482246|fgenesh2_kg.4__1306__AT2G33070.1 Length=1592 Score = 1546 bits (837), Expect = 0.0 Identities = 1228/1419 (87%), Gaps = 18/1419 (1%) Strand=Plus/Plus Query 513 ATGCCA-AAAAGCTAGAAGCAAAGGGTGGTGACACGGGAGATATATGGGATGATGGTGT- 570 ||| || ||||| | ||||||||||||||||| | |||||| |||||||||||||| | Sbjct 134 ATGGCACAAAAGGTGGAAGCAAAGGGTGGTGAGATAGGAGATGTATGGGATGATGGT-TC 192 Query 571 TTACGATAATGTTAGAAAGGTATATGTAGGGCAAGCCCAATATGGTATAGCCTTCGTCAA 630 |||||| ||||||||| ||||| |||||||||| | || ||||||| ||||||||||| Sbjct 193 TTACGACGGTGTTAGAAAAGTATACGTAGGGCAAGGCGAAGATGGTATCGCCTTCGTCAA 252 Query 631 GTTTGAGTATGTCAATGGTTCTCAAGTGGTTGTTGGAGATGAACATGGAAAGAAGACAGA 690 |||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||| Sbjct 253 GTTTGAGTATGTCAATGGTTCTCAAGTGGTTGTTGGCGATGAACGTGGGAAGAAGACTTT 312 Query 691 GCTAGGAGTTGAAGAGTTTGAGATTGATGCGGATGACTACATCGTATACGTGGAAGGATA 750 |||||||| ||| ||||||||| ||||||| ||||||||||| |||||||||||||| || Sbjct 313 GCTAGGAGCTGAGGAGTTTGAGGTTGATGCAGATGACTACATAGTATACGTGGAAGGTTA 372 Query 751 CCGTGAGAAAGTTAAT--GGTAT-GACCTCAGAGATGATCACTTTTCTTTCATTCAAGAC 807 | |||||||||| | ||| | || |||||| ||| | |||| | |||||||| Sbjct 373 TCATGAGAAAGTTTTTGGGGTCTCAACAAAAGAGATCATCTCAACTCTTACGTTCAAGAC 432 Query 808 TTATAAAGGCAAAACCTCTCAGCC-TATCGAACAAAGAC-CTGGTATTAAGTTTGTGCTA 865 ||||||||||||||| |||| ||| | | | | | | | | || | |||||||| || Sbjct 433 TTATAAAGGCAAAACTTCTCCGCCGT-TTGGA-ATTGTCTCCGGGACCAAGTTTGTCCTC 490 Query 866 CAAGGTGGAAAAATTGTTGGGTTTCACGGACGTTCGACCGACGTTCTAG-ACTCCCTCGG 924 |||||||| ||||| |||||||||||||||||||| || || ||| | | |||| || || Sbjct 491 CAAGGTGGCAAAATCGTTGGGTTTCACGGACGTTCCACTGATGTT-TTGCACTCACTTGG 549 Query 925 GGCTTATATTTCATTGTCGCCCACTCCAAACTTGCATGGAAAGTGGACAAAGGTGGATG- 983 || |||||||| ||| || |||||||||| |||| ||||||||||| ||||||||| | Sbjct 550 AGCCTATATTTCTTTGCCGTCCACTCCAAAATTGCGTGGAAAGTGGATAAAGGTGGA-GC 608 Query 984 AAAATGGAGATGGTCCAGGGCTAAGATGCTCGCATGACATAGCACAGGTAGGAAACAAGA 1043 |||| ||||| |||||||||| ||||||||| |||||||||||||| ||||||||||||| Sbjct 609 AAAAAGGAGAGGGTCCAGGGCCAAGATGCTCACATGACATAGCACAAGTAGGAAACAAGA 668 Query 1044 TTTACTCTTTTGGTGGTGAGTTCACACCAAATCAGCCCATCGACAAACACCTTTACGTCT 1103 ||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct 669 TTTACTCCTTTGGTGGTGAGCTCACACCAAATCAGCCCATCGACAAACACCTTTATGTCT 728 Query 1104 TTGACATCGAGAGCCGGACTTGGTCCATTTCTCCAGCCACGGGAGACATTCCAACCCTCT 1163 | ||| |||||| ||||||||||||||||||||||||||| |||||| |||||| ||||| Sbjct 729 TCGACCTCGAGACCCGGACTTGGTCCATTTCTCCAGCCACCGGAGACGTTCCAAACCTCT 788 Query 1164 CTTGCCTAGGTGTCTGTATGGTGTCAATAGGATCGACCCTCTATGTCTTTGGAGGCCGAG 1223 ||||| |||| ||| ||||||||||||| ||||| | ||||||||||||||||||||||| Sbjct 789 CTTGCTTAGGCGTCCGTATGGTGTCAATTGGATCAAGCCTCTATGTCTTTGGAGGCCGAG 848 Query 1224 ACGCTTCACGTCAATACAACGGTTTCTACTCGTTTGACACGACCACA-AACGAGTGGAAA 1282 |||||||||| |||||||||| |||||||||||||| |||| || | |||||||||||| Sbjct 849 ACGCTTCACGAAAATACAACGGCTTCTACTCGTTTGATACGATCA-AGAACGAGTGGAAA 907 Query 1283 CTGCTAACTCCGGTCGAAGAAGGACCCACTCCTCGTAGTTTCCACTCAATGGCAGCCGAT 1342 |||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||| Sbjct 908 CTGCTAACTCCGGTCGAACAAGGACCCACTCCTCGTAGCTTCCACTCGATGGCAGCCGAT 967 Query 1343 GAGGAAAACGTTTACGTTTTCGGTGGAGTGAGTGCTACGGCACGACTCAATACACTAGAC 1402 ||| |||||||||||||||||||||||||||| ||||||| || ||||| ||||||||| Sbjct 968 GAGAAAAACGTTTACGTTTTCGGTGGAGTGAGCGCTACGGTTCGGCTCAAGACACTAGAC 1027 Query 1403 TCTTACAACATCGTTGATAAGAAGTGGTTTCATTGTTCGACTCCAGGAGATTCCCTTACC 1462 ||||||||||||||||| | |||||| |||| |||||||| || |||| |||| ||| | Sbjct 1028 GCTTACAACATCGTTGATCACAAGTGGGTTCAGTGTTCGACCCCGGGAGGTTCCTTTAGC 1087 Query 1463 GCAAGAGGAGGAGCAGGGCTCGAAGTGGTGCAAGGGAAGGTATGGGTTGTGTATGGGTTT 1522 |||||||||||| |||||||||||||| |||||||||||||||||||||||||| || Sbjct 1088 ATAAGAGGAGGAGCCGGGCTCGAAGTGGTACAAGGGAAGGTATGGGTTGTGTATGGATTC 1147 Query 1523 AACGGATGTGAAGTAGATGATGTTCATTACTACGATCCTGTTCAAGACAAGTGGACACAA 1582 |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1148 AACGGATGTGAAGTTGATGATGTTCATTGCTACGATCCTGTTCAAGACAAGTGGACACAA 1207 Query 1583 GTGGAAACATTCGGTGTGAGGCCTTCCGAAAGAAGTGTATTCGCTAGTGCGGCTCTTGGG 1642 |||||||| ||||||| || ||||| | || ||||| ||||||||||||| | ||||| Sbjct 1208 GTGGAAACGTTCGGTGAGAAGCCTTGTGCGAGGAGTGTGTTCGCTAGTGCGGTTGTTGGG 1267 Query 1643 AAACACATTGTGATTTTTGGAGGTGAAATTGCGATGGACCCGCTAGCTCACGTGGGTCCA 1702 ||| || || |||| ||||||||||| || ||||||||||| |||||||| |||||| Sbjct 1268 AAATACCTTTTGATCTTTGGAGGTGAGATAGCGATGGACCCAAAAGCTCACGAGGGTCCG 1327 Query 1703 GGTCAATTGACCGATGGAACTTTTGCATTGGACACAGAGACGTTGCAA-TGGGAGAGGCT 1761 |||||||||| | ||| |||||||| || || |||||||||||| || ||||||| ||| Sbjct 1328 GGTCAATTGAGTGGTGGGACTTTTGCGTTTGATACAGAGACGTTG-AAGTGGGAGAAGCT 1386 Query 1762 GGATAAGTTTGGTGGAGAGGAAGAGACTCCGAGTAGCAGAGGATGGACCGCGTCCACAAC 1821 |||||||||||||| ||||||||||||||| |||| |||||||||| | |||||||| || Sbjct 1387 GGATAAGTTTGGTGAAGAGGAAGAGACTCCAAGTATCAGAGGATGGTCTGCGTCCACGAC 1446 Query 1822 TGCGACCATTGGTGGCAAGAAAGGACTTGTGATGCATGGTGGTAAAGCTCCAACCAATGA 1881 || |||||||| ||| ||||||||||| ||||||| |||||| ||||||| ||| ||||| Sbjct 1447 TGGGACCATTGATGGTAAGAAAGGACTGGTGATGCTTGGTGGGAAAGCTCAAACTAATGA 1506 Query 1882 CCGGTTTGATGATCTCTTCTTTTACGGAATTGACTCTGC 1920 ||||||| ||||||||||||||| ||| |||||||||| Sbjct 1507 TCGGTTTGGTGATCTCTTCTTTTATGGAGTTGACTCTGC 1545 > Ahg929469 jgi|Araly1|929469|scaffold_301926.1 Length=937 Score = 525 bits (284), Expect = 5e-148 Identities = 544/668 (81%), Gaps = 23/668 (3%) Strand=Plus/Plus Query 64 GATGGCCCAAAAGGTTGAAGCACAAGGA-GGAAATGGCGGTAACCAATGGGATGATGGAT 122 |||||| |||||||| |||||||||||| ||||| || || ||||||||||| ||||||| Sbjct 20 GATGGCTCAAAAGGTGGAAGCACAAGGAGGGAAA-GGAGGCAACCAATGGGACGATGGAT 78 Query 123 CCGAATACGACGCTGTGACCAAGATTCAAGTCGCAGCAGGCGGGA-ACGGAATTGAATAT 181 ||| | | |||||||||||||||||||| |||| |||||| ||| ||| ||| |||| Sbjct 79 CCGTACATGACGCTGTGACCAAGATTCAGGTCGGAGCAGG-TGGACTCGGCATTCAATAC 137 Query 182 GTTAAGTTC-ACATACGTCAAGAACGGACAAACCGAAGAAGCCCCTCTACGCGGTGTCAA 240 ||| ||||| || || ||||||||||||||||| |||||||| ||||| ||||| |||| Sbjct 138 GTTCAGTTCGAC-TATGTCAAGAACGGACAAACTGAAGAAGCTCCTCTTCGCGGCATCAA 196 Query 241 GGGCCGTAGTTTCGAAGCAGATCCGTTTGTGATAAACCATCCGGAGGAGCACTTAGTTTC 300 ||||||||| ||| ||| |||||||||||||| |||||||| ||||| ||||| ||||| Sbjct 197 AGGCCGTAGTATCGCAGCTGATCCGTTTGTGATCAACCATCCAGAGGAACACTTGGTTTC 256 Query 301 TGTAGAAGGTCGGTATAACCCTGAAGGACTTATTCTAGGGC-TAACGTTCAAATCCAACA 359 |||||||||| |||||||||||||||| |||||| ||||| ||| ||||||||| |||| Sbjct 257 TGTAGAAGGTTGGTATAACCCTGAAGGTGTTATTCAAGGGCTTAA-GTTCAAATCGAACA 315 Query 360 AGAAGACTTCTGATCTCATTGGATATGAAGATGGTACACCGTTCACTCTCCAAGTTCAAG 419 |||| ||||||||| |||||||||| || |||||||| | ||||||||||||||||||| Sbjct 316 AGAAAACTTCTGATGTCATTGGATACGACGATGGTACTCAATTCACTCTCCAAGTTCAAG 375 Query 420 ACAAGAAGATCGTTGGATTTTATGGCTTCGCTGGAAACAATCTCCATTCTCTTGGAGCGT 479 ||||||||||| ||| ||| |||| || |||||| ||||||| |||||||||| || | Sbjct 376 ACAAGAAGATCACTGGCTTTCATGGGTTTGCTGGAGACAATCTTAATTCTCTTGGGGCTT 435 Query 480 ACTTTGCTCCGTTGACTAATGTAACCCCC-TTGAA---TGCCAAAAAGCTAGAAGCAAAG 535 |||||||||||||||||| | | | |||| |||| |||||| ||||| |||| Sbjct 436 ACTTTGCTCCGTTGACTACT-TCAGCCCCGTTGATCCCTGCCAAGAAGCTTCCAGCACTT 494 Query 536 GGTGGTGAC-ACGGGAGATATATGGGATGATGGTGTTTACGATAATGTTA-GAAAGGTAT 593 ||| |||| | || | | |||||| ||||||| ||| || ||||| ||| ||| Sbjct 495 GGTAGTGATGAAGGAAC-TGCATGGGACGATGGTGCTTATAATGGTGTTAAGAA-GGTGC 552 Query 594 ATGTAGGGCAAGCCCAATATGGTATAGCCTTCG-TCAAGTTTGAGTATGTCAATGGTTCT 652 || |||| |||| | ||||| | || || | |||||||||||||||||||||||| Sbjct 553 ATATAGGTCAAGGACTCGATGGTGTGGCAG-CGGTTAAGTTTGAGTATGTCAATGGTTCT 611 Query 653 CAAGTGGTTGTTGGAGATGAACATGGAAAGAAGACAG-AGCTAGGAGTT-GAAGAGTTTG 710 ||| | |||||||||||||||| |||||||| ||| | || || || |||||||| | Sbjct 612 CAAATTGTTGTTGGAGATGAACGTGGAAAGACGACTCTA-CTCGGC-TTCGAAGAGTTCG 669 Query 711 AGATTGAT 718 | |||||| Sbjct 670 ACATTGAT 677 > Ahg930637 jgi|Araly1|930637|scaffold_303094.1 Length=257 Score = 339 bits (183), Expect = 7e-92 Identities = 235/260 (90%), Gaps = 4/260 (2%) Strand=Plus/Plus Query 1160 CTCTCTTGCCTAGGTGTCTGTATGGTGTCAATAGGATCGACCCTCTATGTCTTTGGAGGC 1219 |||||||| |||||||| |||||||| ||| |||||||||||| ||||||||||||||| Sbjct 1 CTCTCTTGATTAGGTGTCCGTATGGTGGCAACAGGATCGACCCTTTATGTCTTTGGAGGC 60 Query 1220 CGAGACGCTTCACGTCAATACAACGGTTTCTACTCGTTTGACACGACCACAAACGAGTGG 1279 |||||||||||| | |||||||||||||||||||| ||||||||| |||||||| || Sbjct 61 CGAGACGCTTCATGCCAATACAACGGTTTCTACTC---AGACACGACCCCAAACGAGAGG 117 Query 1280 AAACTGCTAACTCCGGTCGAAGAAGGACCCACTCCTCGTAGTTTCCACTCAATGGCAGCC 1339 ||||| ||| |||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 118 AAACTCCTATCTCCGGTCGAAGAAGGACCCACTCCTCGTAGTTTCCACTCGATGACAGCC 177 Query 1340 GATGAGGAAAACGTTTACGTTTTCGGTGGAGTGAGTGCTACGGCACGACTCAATACACTA 1399 |||||||||||||||||||||||||||||||||||| |||||| || | || |||||| Sbjct 178 GATGAGGAAAACGTTTACGTTTTCGGTGGAGTGAGTTTTACGGCCCGGTT-AAGACACTA 236 Query 1400 GACTCTTACAACATCGTTGA 1419 |||||||||||||||||||| Sbjct 237 GACTCTTACAACATCGTTGA 256 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 79227709600 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5