BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G16830.1 Length=3812 Score E Sequences producing significant alignments: (Bits) Value Ahg479149 jgi|Araly1|479149|fgenesh2_kg.3__1850__AT3G16830.1 6032 0.0 Ahg890655 jgi|Araly1|890655|Al_scaffold_0007_2641 3657 0.0 > Ahg479149 jgi|Araly1|479149|fgenesh2_kg.3__1850__AT3G16830.1 Length=3773 Score = 6032 bits (3266), Expect = 0.0 Identities = 3626/3796 (96%), Gaps = 40/3796 (1%) Strand=Plus/Plus Query 5 TTTTCTTAATGTTCGCTTTGCGACGCGAGGAAATGCAACCTTGAAACCCTAGAAAACTCA 64 ||||||| || |||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 2 TTTTCTTCATTTTCGCTTTGCGACGCGAGGAAATGCAACCTTGAAACCCTAGAAAAC-CA 60 Query 65 TTCTCAACTACGACTAAATCGATTTCGCAAACTTTGACCTACCCTTCTTTCACGATAAAC 124 ||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct 61 TTC-CAACTACGACTAAATCGATTTCACAAACTTTGACCTACCCTTCTTTCACCATAAAC 119 Query 125 CCAGATCGCTTAAATTCCTTGAATTTCTTCTTCTGAGAGTTTTAGGAAAAAATGTCGTCT 184 ||||||||||| ||||||||||| | ||| || | ||||||||||||| Sbjct 120 CCAGATCGCTTTAATTCCTTGAA-----T-TTC---------TA-GCAAAAATGTCGTCT 163 Query 185 TTGAGCAGAGAGTTAGTTTTCTTAATTCTCCAGTTCTTAGATGAGGAGAAGTTCAAGGAA 244 ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct 164 TTGAGCAGAGAGTTAGTTTTCCTAATCCTCCAGTTCTTAGATGAGGAGAAGTTCAAGGAA 223 Query 245 TCTGTTCACAAGCTAGAGCAAGAATCTGGCTTCTTCTTTAACATTAAGTACTTTGAAGAG 304 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct 224 TCTGTTCACAAGCTAGAGCAAGAATCTGGCTTCTTTTTTAATATTAAGTACTTTGAAGAG 283 Query 305 AAAGCTCTTGCTGGAGAGTGGGATGAAGTGGAGAAGTATCTTTCTGGTTTCACTAAAGTC 364 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 284 AAAGCTCTTGCTGGAGAGTGGGACGAAGTGGAGAAGTATCTTTCTGGTTTCACTAAAGTC 343 Query 365 GATGATAATCGTTACTCTATGAAAATCTTCTTTGAGATTAGGAAGCAAAAGTATCTCGAA 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 344 GATGATAATCGTTACTCTATGAAAATCTTCTTTGAGATTAGGAAGCAAAAGTATCTCGAA 403 Query 425 GCTCTAGATCGAAATGACAGAGCAAAAGCTGTTGAGATATTAGCCAAAGACTTGAAAGTT 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 404 GCTCTAGATCGAAATGACAGAGCAAAAGCTGTTGAGATATTAGCCAAAGACTTGAAAGTT 463 Query 485 TTCGCTACATTTAACGAGGAGCTTTACAAGGAGATTACTCAGCTGCTTACTCTGGAGAAT 544 ||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 464 TTCGCGACCTTTAACGAGGAGCTTTACAAGGAGATTACTCAGCTGCTAACTCTGGAGAAT 523 Query 545 TTTAGGGAAAATGAGCAACTGTCGAAATATGGTGATACTAAATCTGCAAGGTCTATAATG 604 |||||||||||||||||| |||| |||||||||||||| ||||| || |||||||||||| Sbjct 524 TTTAGGGAAAATGAGCAATTGTCTAAATATGGTGATACGAAATCAGCGAGGTCTATAATG 583 Query 605 TATACTGAGTTGAAGAAATTGATTGAGGCGAATCCTCTGTTTCGAGAGAAGCTAGCCTTC 664 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 584 TATACTGAGTTGAAGAAATTGATTGAGGCAAATCCTCTGTTTCGAGAGAAGCTAGCCTTC 643 Query 665 CCCAGTTTCAAAGCTTCTCGCCTGCGAACTTTGATCAATCAAAGCTTAAACTGGCAGCAT 724 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 644 CCCAGTTTCAAAGCTTCTCGCCTGCGAACTTTGATCAATCAAAGCTTAAACTGGCAGCAC 703 Query 725 CAGCTATGTAAAAATCCAAGGCCTAATCCTGACATCAAGACATTGTTCTTGGATCACTCT 784 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 704 CAGCTATGTAAAAATCCAAGGCCTAATCCTGACATCAAGACATTGTTCTTGGATCACTCT 763 Query 785 TGCTCACCATCAAACGGTGCTCGTGCACTCACTCCTGTCAATCTTCCAGTTGCTGCTGTT 844 |||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct 764 TGCTCACCATCAAATGGTGCTCGTGCTCTCACTCCTGTGAATCTTCCAGTTGCTGCTGTT 823 Query 845 GCAAGACCTTCAAACTTTGTTCCTCTTGGAGTGCATGGTGGACCCTTTCAATCTAATCCT 904 |||||||||||||||||||||||||||||||| ||||||||||| |||||| ||| ||| Sbjct 824 GCAAGACCTTCAAACTTTGTTCCTCTTGGAGTACATGGTGGACCGTTTCAACCTAGCCCT 883 Query 905 GCTCCGGCTCCTAATGCCAATGCTTTAGCTGGATGGATGGCAAACCCAAATCCTTCTTCA 964 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 884 GCCCCGGCTCCTAATGCCAATGCTTTAGCTGGATGGATGGCAAACCCAAATCCTTCTTCA 943 Query 965 TCAGTTCCATCTGGTGTTGTCGCTGCTTCCCCATTTCCTATGCAGCCAAGTCAAGTTAAT 1024 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 944 TCAGTTCCATCTGGTGTCGTCGCTGCTTCCCCATTTCCTATGCAGCCAAGTCAAGTTAAT 1003 Query 1025 GAGCTGAAACACCCTCGGGCACCGTCTAACTCTCTAGGATTAATGGATTATCAAAGTGCT 1084 | | |||||||||||||||||||||||||||||||||| || ||||||||||||| |||| Sbjct 1004 GTGTTGAAACACCCTCGGGCACCGTCTAACTCTCTAGGGTTGATGGATTATCAAAATGCT 1063 Query 1085 GATCACGAGCAACTCATGAAACGCTTACGGTCTGCACAAACATCCAACGAGGTCACATAT 1144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1064 GATCACGAGCAACTCATGAAACGCTTACGGTCTGCACAAACATCCAACGAGGTCACATAT 1123 Query 1145 CCTGCTCATTCTCATCCCCCTGCGTCACTTGATGACCTCCCTAGAAATGTAGTGAGTACA 1204 ||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||| ||| Sbjct 1124 CCTGCCCATTCTCATCCCGCTGCGTCACTTGATGACCTCCCTAGAAATGTCGTGAGCACA 1183 Query 1205 ATTCGCCAAGGGTCGGTGGTGATAAGCATGGATTTTCACCCTTCTCATCACACTTTGCTC 1264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1184 ATTCGCCAAGGGTCGGTGGTGATAAGCATGGATTTTCACCCTTCTCATCACACTTTACTC 1243 Query 1265 GCTGTTGGTTGTTCAAGCGGCGAAGTCACCTTGTGGGAAGTTGGATCCAGAGAAAAGGTT 1324 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1244 GCTGTTGGTTGTTCAAGCGGCGAAGTCACCTTGTGGGAAGTTGGATCCAGAGAGAAGGTT 1303 Query 1325 GTCACAGAACCTTTCAAGATATGGAATATGGCGGCTTGTTCTGTGATCTTCCAGGGTTCT 1384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1304 GTCACAGAACCTTTCAAGATATGGAATATGGCGGCTTGTTCTGTGATCTTCCAGGGTTCT 1363 Query 1385 ATAGTCAAAGAGCCATCGATATCCGTCACTCGTGTAGCATGGAGCCCAGATGGAAACTTG 1444 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct 1364 ATAGTCAAAGAGCCATCGATATCTGTCACTCGTGTAGCATGGAGCCCAGATGGAAATTTG 1423 Query 1445 CTTGGGGTTTCTTTTACTAAACATCTGATCCATGTATATGCTTACCAAGGCTCAGACCTA 1504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1424 CTTGGGGTTTCTTTTACTAAACATCTGATCCATGTATATGCTTACCAAGGCTCAGACCTA 1483 Query 1505 CGTCAACACCTCGAGATTGATGCTCATGTAGGCTGTGTGAATGACTTGGCGTTCGCCCAC 1564 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1484 CGTCAGCACCTCGAGATTGATGCTCATGTAGGCTGTGTGAATGACTTGGCGTTCGCCCAC 1543 Query 1565 CCAAATAAGCAAATGTGTGTTGTGACTTGTGGGGATGACAAATTGATTAAGGTGTGGGAT 1624 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1544 CCAAATAAGCAAATGTGTGTTGTGACTTGTGGTGATGACAAATTGATTAAGGTGTGGGAT 1603 Query 1625 TTGAGTGGGAAGAAGCTCTTCACCTTTGAAGGGCACGAGGCACCAGTTTATTCCATTTGC 1684 ||||||||||||||||| ||||| |||||||| ||||||||||| ||||||||||||||| Sbjct 1604 TTGAGTGGGAAGAAGCTTTTCACTTTTGAAGGCCACGAGGCACCGGTTTATTCCATTTGC 1663 Query 1685 CCTCACCAGAAGGAAAATATTCAGTTTATATTCTCAACCGCTCTTGATGGAAAGATCAAG 1744 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1664 CCTCACCAGAAGGAAAATATTCAGTTTATATTCTCAACAGCTCTTGATGGAAAGATCAAG 1723 Query 1745 GCGTGGCTCTATGATAATGTTGGTTCTCGGGTTGATTATGACGCACCGGGACAGTGGTGT 1804 |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct 1724 GCGTGGCTCTATGATAATGTTGGTTCTCGGGTTGATTACGACGCACCAGGACAGTGGTGT 1783 Query 1805 ACAACAATGCTCTACAGTGCTGATGGAAGCAGACTATTTTCTTGTGGGACGAGTAAAGAA 1864 ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct 1784 ACAACAATGCTCTACAGTGCTGATGGAAGCAGATTATTTTCTTGTGGTACGAGTAAAGAG 1843 Query 1865 GGAGACTCTTTCCTCGTCGAGTGGAATGAGAGTGAAGGTGCCCTAAAGAGGACATATTTA 1924 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct 1844 GGAGACTCTTTCCTCGTTGAGTGGAATGAGAGCGAAGGTGCCCTAAAGAGGACATATTTA 1903 Query 1925 GGCTTTAGGAAGAAATCAGCTGGAGTTGTTCAGTTTGATACAACCCGTAACCGTTTCTTG 1984 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1904 GGCTTTAGGAAGAAATCACCTGGAGTTGTTCAGTTTGATACAACCCGTAACCGTTTCTTG 1963 Query 1985 GCTGTTGGTGAAGACAATCAAATAAAATTCTGGAACATGGACAATACAAATCTTTTGACA 2044 |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct 1964 GCTGTTGGTGAAGACAATCATGTAAAATTCTGGGACATGGACAATACAAATCTTTTGACA 2023 Query 2045 GTTGTTGAGGCTGAAGGTGGACTTCCGAATCTACCCCGATTGAGATTCAACAAGGATGGG 2104 ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct 2024 ACTGTTGAGGCTGAAGGAGGACTTCCGAATCTACCCCGACTGAGATTCAACAAGGATGGG 2083 Query 2105 AATCTTCTTGCAGTTACTACAGCAGATAATGGATTCAAGATCCTTGCAAATACTGATGGT 2164 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 2084 AATCTTCTTGCAGTTACTACAGCAGATAACGGATTCAAGATCCTTGCAAATACTGATGGT 2143 Query 2165 CTCAGAACCTTAAGAGCATTTGAAGCGCGGTCTTTTGAAGCATCTAAAGCATCCATTGAT 2224 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2144 CTCAGAACATTAAGAGCATTTGAAGCGCGGTCTTTTGAAGCATCTAAAGCATCCATTGAT 2203 Query 2225 ATGAAGGTATCCACCTCCGCAATGGCTTCAAGCATCAGCCCCGCTATTGGTAAAATTGAA 2284 |||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||| Sbjct 2204 ATGAAGGTATCCCCCTCCGCAATGGCTACAAGCATCAGCCCAGCTATTGGTAAAATTGAA 2263 Query 2285 CACATGGACGCAGGCTCTCCTGCAAGGCCAACCCCAATTCCTAATGGAATTGAGGCAATG 2344 ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2264 CACATGGACACAGACTCTCCTGCAAGGCCAACCCCAATTCCTAATGGAATTGAGGCAATG 2323 Query 2345 TCAAGAACTATGGAAAAGCCAAGAAACTTGGACTCTGTTGATAAGTCTAAACCTTTAGAG 2404 ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||| Sbjct 2324 TCAAGAACTATGGAAAAGCCAAGAAACGTGGACCCTGTTGATAAGTCTAAAACTTTAGAG 2383 Query 2405 CTCACAGAAATTGTTGATCCGACTCAGTGCCGACAAGTGA-CAATGCCAGATAGCAAGGA 2463 |||||||||||||||||||||||||||||||||||||| | || |||||||||||||||| Sbjct 2384 CTCACAGAAATTGTTGATCCGACTCAGTGCCGACAAGTAAACA-TGCCAGATAGCAAGGA 2442 Query 2464 CTCTGTTAGCAAGGTTGCTCGGCTTCTTTACACAAATTCTGGCGTTGGTGTTTTGGCTCT 2523 |||||||||||||||||||||||||| || ||||||||||| || |||||||||||||| Sbjct 2443 TTCTGTTAGCAAGGTTGCTCGGCTTCTGTATACAAATTCTGGTGTCGGTGTTTTGGCTCT 2502 Query 2524 TGGATCAAATGGTGTTCAAAGACTATGGAAGTGGATCCGCAATGAGCAAAATCCAACTGG 2583 ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| Sbjct 2503 TGGATCAAATGGTGTCCAAAGACTATGGAAGTGGAGCCGCAATGAGCAAAATCCAACTGG 2562 Query 2584 GAAGGCAACTGCTAGTGTAACTCCACAGCATTGGCAGCCAAACAGCGGTCTCCTAATGGC 2643 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2563 GAAGGCAACTGCTAGTGTAACTCCACAGCATTGGCAGCCAAACAGCGGTCTCCTAATGGC 2622 Query 2644 AAATGATGTTCCCGAGAATCCTGAAGGGAG-TGTTCCGTGTATAGCACTTTCCAAGAATG 2702 |||||||||||| ||||||||||||||| | ||||||||||||||| ||||| ||||||| Sbjct 2623 AAATGATGTTCCTGAGAATCCTGAAGGG-GCTGTTCCGTGTATAGCGCTTTCTAAGAATG 2681 Query 2703 ACTCATACGTAATGTCAGCTTGTGGTGGAAAGGTTTCGTTATTCAATATGATGACTTTCA 2762 ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 2682 ACTCATATGTAATGTCAGCTTGTGGTGGAAAAGTTTCGTTATTCAATATGATGACTTTCA 2741 Query 2763 AAGTAATGACAACTTTCATGCCACCGCCACCAGCTTCAACTTTCTTGGCATTTCATCCTC 2822 ||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct 2742 AAGTAATGACAACGTTCATGCCACCACCACCAGCTTCAACTTTCTTGGCGTTTCATCCTC 2801 Query 2823 AAGATAATAATATTATTGCAATCGGGATGGAGGACTCGAGTATACATATTTACAACGTCA 2882 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2802 AAGATAATAACATTATTGCAATCGGGATGGAGGACTCGAGTATACATATTTACAACGTCA 2861 Query 2883 GGGTAGATGAGGTGAAAACAAAGTTGAAAGGTCACCAGAAGCACATAACTGGTCTAGCAT 2942 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2862 GGGTAGATGAGGTGAAAACAAAGTTGAAAGGTCACCAGAAGCACATAACTGGTCTAGCAT 2921 Query 2943 TCTCTACCGCGCTCAATATTCTTGTCTCTTCTGGTGCCGATGCTCAGCTCTTCTTCTGGA 3002 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2922 TCTCTACCGCACTCAATATTCTTGTCTCTTCTGGTGCCGATGCTCAGCTCTTCTTCTGGA 2981 Query 3003 CCGCTGACTCGTGGGAGAAAAAGAAATCTTCAGCGATACAGCTACCACCTGGCAAAGCAC 3062 ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct 2982 CCGCTGACTCGTGGGAGAAGAAGAAATCTTCAGCGATACAGCTACCACCTGGAAAAGCAC 3041 Query 3063 CAGTAGGCGACACACGAGTCCAATTCCACAACGACCAAATCCAGTTATTGGTTTCACATG 3122 ||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 3042 CAGTAGGTGACACGCGAGTCCAATTCCATAACGACCAAATCCAGTTATTGGTTTCACATG 3101 Query 3123 AGACACAGCTCGCCATTTACGATGCTTCGAAGATGGAATGCATTCATAAGTGGGTGCCCC 3182 |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct 3102 AGACACAGCTAGCCATTTACGATGCTGCGAAGATGGAATGCATTCATAAGTGGGTGCCAC 3161 Query 3183 AAGAAGCTCTCTCTTCGCCCATAACCTCTGCATCTTACTCATGCAACAGCCAACTGGTTT 3242 |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3162 AAGACGCTCTCTCGTCGCCCATAACCTCTGCATCTTACTCATGCAACAGCCAACTGGTTT 3221 Query 3243 ACGCGTCATTCGCTGATGGAAACATTGCAGTCTTTGATGCTGAATCCTTGAGACTCAGAT 3302 || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 3222 ACTCGTCATTCGCTGATGGAAACATTGGAGTCTTTGATGCTGAATCCTTGAGACTCAGAT 3281 Query 3303 GCCGCATTGCCCCATCAGCCTACATGCCTCAACCTACACCAAACAGTGCACCGATT-TTC 3361 | ||||||||||||||||| |||||||||||||| ||||| |||||||||||||| ||| Sbjct 3282 GTCGCATTGCCCCATCAGCTTACATGCCTCAACCAACACCGAACAGTGCACCGATCATTC 3341 Query 3362 CCACAGGTGATCACAGCTCATCCACAAGAACCGAATCAATTAGCGGTTGGACTGTCTGAT 3421 | ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| Sbjct 3342 C-ACAGGTGATCACAACTCATCCACAAGAACCGAATCAATTAGCGGTTGGACTCTCTGAT 3400 Query 3422 GGTTCGGTTAAAGTGA-TTGAGCCATCAGAACTTTCTAGAAGATGGGGTGTTGGCGTCGC 3480 |||||||||||||| | |||||||||| |||||||||||||||||||||||||||||| | Sbjct 3401 GGTTCGGTTAAAGT-ACTTGAGCCATCGGAACTTTCTAGAAGATGGGGTGTTGGCGTCAC 3459 Query 3481 AGCTGGTTCAGATAAAGCAGGGACTGAAAATGGACGGCCGTCTAGTTCATCAGCGGCTAA 3540 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3460 GGCCGGTTCAGATAAAGCAGGGACTGAAAATGGACGGCCGTCTAGTTCATCAGCGGCTAA 3519 Query 3541 CAACTCAAGTTCGGATCAGATTCAAAGGTAAAAATAGTTTATGTCAGTTAAGTTAGTTGA 3600 |||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||| Sbjct 3520 CAACTCAAGTTCAGATCAGATTCAAAGGTAAAAATAGCTGATGTCAGTTAAGTTAGTTGA 3579 Query 3601 CATATCTCTTGTTATTTTGGATTGTAAAGTTGTGATAGCTTGTGCTGTTTTTGTAAATGA 3660 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3580 CATATCTTTT-TTATTTTGGATTGTAAAGTTGTGATAGCTTGTGCTGTTTTTGTAAATGA 3638 Query 3661 GATTCTCAAATTAAATCAGTAGGCGCAATAACAGTT-T-ATTTTATATTTTT-----CGG 3713 |||||| |||||||||||||||||| |||||||||| | ||||| ||||||| ||| Sbjct 3639 GATTCTTAAATTAAATCAGTAGGCGTAATAACAGTTGTTATTTTTTATTTTTTATTTCGG 3698 Query 3714 CGTTTTAACAGTTTTA-AGATGGCTATA---CTCTTGAATGTAGTAGCTCTTAAA-TCTA 3768 |||| ||||||||||| | | ||||||| |||||||||||||| ||| |||| | || Sbjct 3699 CGTTATAACAGTTTTAGAAA-GGCTATAATACTCTTGAATGTAGTGGCTTTTAATGTGTA 3757 Query 3769 TGGATTTGTCAAAAAT 3784 |||||||||||||||| Sbjct 3758 TGGATTTGTCAAAAAT 3773 > Ahg890655 jgi|Araly1|890655|Al_scaffold_0007_2641 Length=3378 Score = 3657 bits (1980), Expect = 0.0 Identities = 2959/3428 (86%), Gaps = 82/3428 (2%) Strand=Plus/Plus Query 176 ATGTCGTCTTTGAGCAGAGAGTTAGTTTTCTTAATTCTCCAGTTCTTAGATGAGGAGAAG 235 ||||| ||| | ||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct 1 ATGTCATCTCTAAGCAGAGAGTTAGTTTTCTTAATTCTCCAGTTCTTAGATGAAGAAAAG 60 Query 236 TTCAAGGAATCTGTTCACAAGCTAGAGCAAGAATCTGGCTTCTTCTTT-AACATT-AAGT 293 ||||| ||||||||||||||||| ||||||||||| || | ||| ||| || || |||| Sbjct 61 TTCAAAGAATCTGTTCACAAGCTTGAGCAAGAATCGGGATACTT-TTTCAA-TTTGAAGT 118 Query 294 ACTTTGAAGAGAAAGCTCTTGC-TGGAGAGTGGGATGAAGTGGAGAAGTATCTTTCTGGT 352 ||||||||||||| ||| |||| ||| |||||||| |||||||||||||||||||||||| Sbjct 119 ACTTTGAAGAGAAGGCT-TTGCTTGGGGAGTGGGACGAAGTGGAGAAGTATCTTTCTGGT 177 Query 353 TTCACTAAAGTCGATGATAATCGTTACTCTATGAAAATCTTCTTTGAGATTAGGAAGCAA 412 |||||||| || ||||||||||||||||| |||||||||||||| ||||| ||||||||| Sbjct 178 TTCACTAAGGTTGATGATAATCGTTACTCGATGAAAATCTTCTTCGAGATCAGGAAGCAA 237 Query 413 AAGTATCTCGAAGCTCTAGATCGAAATGACAGAGCAAAAGCTGTTGAGATATTAGCCAAA 472 |||||||||||||| |||||||||||||| || |||||||||||||||||||||| |||| Sbjct 238 AAGTATCTCGAAGCACTAGATCGAAATGATAGGGCAAAAGCTGTTGAGATATTAG-CAAA 296 Query 473 -GACTTGAAAGTTTTCGCTACATTTAACGAGGAGCTTTACAAGGAGATTACTCAGCTGCT 531 |||||||||||||| || ||||| |||||||||||||||||||| || |||||||| || Sbjct 297 GGACTTGAAAGTTTTTGCAACATTCAACGAGGAGCTTTACAAGGAAATCACTCAGCTTCT 356 Query 532 TACTCTGGAGAATTTTAGGGAAAATGAGCAACTGTCGAAATATGGTGATACTAAATCTGC 591 ||||||||||||||||||||||||||| || | ||||||||||||||||| ||||| || Sbjct 357 TACTCTGGAGAATTTTAGGGAAAATGACCAGTTATCGAAATATGGTGATACCAAATCAGC 416 Query 592 AAGGTCTATAATG-TATACTGAGTTGAAG-AAATTGATTGAGGCGAATCCTCTGTTTCGA 649 ||| ||| ||| | | |||||| || |||||||||||||| |||||||||||| || Sbjct 417 TAGGGGTATTATGCT-TGGGGAGTTG-AGAAAATTGATTGAGGCAAATCCTCTGTTTAGA 474 Query 650 GAGAAGCTAGCCTTCCCCAGTTTCAAAGCTTCTCGCCTGCGAACTTTGATCAATCAAAGC 709 |||||||| || || |||| |||||| ||||| ||||||||||| ||||||||||||||| Sbjct 475 GAGAAGCTTGCTTTACCCACTTTCAAGGCTTCACGCCTGCGAACCTTGATCAATCAAAGC 534 Query 710 TTAAACTGGCAGCATCAGCTATGTAAAAATCCAAGGCCTAATCCTGACATCAAGACATTG 769 || || ||||| ||||||||||||||||| |||||||||||||| |||||||| |||||| Sbjct 535 TTGAATTGGCAACATCAGCTATGTAAAAACCCAAGGCCTAATCCAGACATCAAAACATTG 594 Query 770 TTC-TTGGATCACTCTTGCTCACCATC-AAACGGTGCTCGTGCACTCACTCCTGTCAATC 827 ||| | |||||| |||| |||||| | ||| || |||||||||| ||||||||| || Sbjct 595 TTCACT-GATCACACTTGTTCACCA-CAAAATGGAGCTCGTGCACCCACTCCTGT---TC 649 Query 828 TTCCAGTTGCTGCTGTTGC-AAGACCTTCAAAC-TTTGTTCCTCTTGGAGTGCATGGTGG 885 ||||||||| ||||||||| ||| ||||| ||| | || ||||||||| || |||||||| Sbjct 650 TTCCAGTTGGTGCTGTTGCAAAG-CCTTC-AACATATGCTCCTCTTGGGGTACATGGTGG 707 Query 886 ACCCTTTCAATCTAATCCTGCTCCGGCTCCTAATGCCAATGCTTTAGCTGGATGGATGGC 945 ||| ||||| ||| | |||||||||||||||| || ||||||||||||||||||||||| Sbjct 708 ACCTTTTCAGCCTACTTCTGCTCCGGCTCCTAACGCAAATGCTTTAGCTGGATGGATGGC 767 Query 946 AAACCCAAATCCTTCTTCATCAGTTCCAT-CTGGTGTTGTCG-CTGCTTCCCCATTTCCT 1003 |||||||||||| |||||||||||||| | ||||||||| | || |||||||||||||| Sbjct 768 AAACCCAAATCCATCTTCATCAGTTCC-TGGTGGTGTTGTGGCCT-CTTCCCCATTTCCT 825 Query 1004 ATGCAGCCAAGTCAAGTTAATGA-GCTGAAACACCCTCGGGCACCGTCTAACTCTCTAGG 1062 |||||||||| ||||||| | ||| |||||||||||| |||| || ||||| || || Sbjct 826 ATGCAGCCAAATCAAGTT-GCCATGCTAAAACACCCTCGGCCACCCTCAAACTCCCTTGG 884 Query 1063 ATTAATGGATTATCAAAGTGCTGATCACGAGCAACTCATGAAACGCTTACGGTCTGCACA 1122 | | ||||||||||||||||||||||| |||||||| |||||||| |||||||||| || Sbjct 885 AATGATGGATTATCAAAGTGCTGATCATGAGCAACTTATGAAACGTTTACGGTCTGGACC 944 Query 1123 AACAT-CCAACGAGGTCACATATCCTGCTCATTCTCATCC-CCCTGCGTCACTTGATGAC 1180 ||| | | |||||||||||||||||||||||||| || || || |||||||||||| Sbjct 945 AAC-TGGTGATGAGGTCACATATCCTGCTCATTCTCAGCCTACC-GCCTCACTTGATGAC 1002 Query 1181 CTCCCTAGAAATGTAGTGAGTACAATTCGCCAAGGGTCGGTGGTGATAAGCATGGATTTT 1240 |||||| ||||||||||||||||||| ||||||||||| | ||||| ||||||||||||| Sbjct 1003 CTCCCTCGAAATGTAGTGAGTACAATGCGCCAAGGGTCAGCGGTGACAAGCATGGATTTT 1062 Query 1241 CACCCTTCTCATCACACTTTGCTCGCTGTTGGTTGTTCAAGCGGCGAAGTCACCTTGTGG 1300 |||||||| |||||||| ||||| ||||||||||||| ||||||||| ||||||||||| Sbjct 1063 CACCCTTCCCATCACACGCTGCTCACTGTTGGTTGTTCCAGCGGCGAATTCACCTTGTGG 1122 Query 1301 GAAGTTGGATCCAGAGAAAAGGTTGTCACAGAACCTTTCAAGATATGGAATATGGCGGCT 1360 ||||||||||| ||||| ||| || ||||||| ||||||||||||||||||||||| || Sbjct 1123 GAAGTTGGATCTAGAGAGAAGCTTTTCACAGAGCCTTTCAAGATATGGAATATGGCATCT 1182 Query 1361 TGTTCTGTGATCTTCCAGGGTTCTATAGTCAAAGAGCCATCGA-TATCCGTCACTCGTGT 1419 |||||||||||||||||||||||||| ||||| || ||||| | |||| |||| |||||| Sbjct 1183 TGTTCTGTGATCTTCCAGGGTTCTATTGTCAAGGACCCATC-AGTATCTGTCAGTCGTGT 1241 Query 1420 AGCATGGAGCCCAGATGGAAACTTGC-TTGGGGTTTC-TTTTACTAAACATCTGATCCAT 1477 | ||||||| ||||||||||| || | |||||||| | |||| ||||||||||||||||| Sbjct 1242 ATCATGGAGTCCAGATGGAAA-TTTCATTGGGGTTGCGTTTT-CTAAACATCTGATCCAT 1299 Query 1478 GTATATGCTTACCAAGGCTCAGACCTACGTCAACACCTCGAGATTGATGCTCATGTAGGC 1537 ||||| |||||||||| || || |||||||||||||| ||||| ||||| ||||| ||| Sbjct 1300 ATATATTCTTACCAAGGGTCTGAACTACGTCAACACCTAGAGATGGATGCACATGTTGGC 1359 Query 1538 TGTGTGAATGACTTGGCGTTCGCCCACCCAAATAAGCAAATGTGTGTTGTGACTTGTGGG 1597 |||||| |||||||||| ||||||||||||||||||||| | ||| |||||||||||||| Sbjct 1360 TGTGTGCATGACTTGGCCTTCGCCCACCCAAATAAGCAACTTTGTATTGTGACTTGTGGG 1419 Query 1598 GATGACAAATTGATTAAGGTGTGGGATTTGAGTGGGAAGAAGCTCTT-CACCTTTGAAGG 1656 || || |||||||| ||||| |||||||||||||||||||| || || ||||||||||| Sbjct 1420 GAAGATAAATTGATAAAGGTCTGGGATTTGAGTGGGAAGAAACT-TTATACCTTTGAAGG 1478 Query 1657 GCACGAGGCACCAGTTTATTCCATTTGCCCTCACCAGAAGGAAAATATTCAGTTTATATT 1716 ||||||||| |||||||| ||||| |||||||||||||| |||||||| ||||||||||| Sbjct 1479 GCACGAGGCTCCAGTTTACTCCATCTGCCCTCACCAGAAAGAAAATATCCAGTTTATATT 1538 Query 1717 CTCAACCGCTCTTGATGGAAAGATCAAGGCGTGGCTCTATGATAATGTTGGTTCTCGGGT 1776 |||||| ||||||||||| ||||||||||| ||||||||||||||||| |||||| | || Sbjct 1539 CTCAACTGCTCTTGATGGTAAGATCAAGGCTTGGCTCTATGATAATGTGGGTTCTAGAGT 1598 Query 1777 TGATTATGACGCACCGGGACAGTGGTGTACAACAATGCTCTACAGTGCTGATGGAAGCAG 1836 ||| ||||| ||||| ||||||||||||||||| ||||| || ||||||||||| ||||| Sbjct 1599 TGACTATGATGCACCAGGACAGTGGTGTACAACTATGCTATATAGTGCTGATGGTAGCAG 1658 Query 1837 ACTATTTTCTTGTGGGACGAGTAAAGAAGGAGACTCTTTCCTCGTCGAGTGGAATGAGAG 1896 | ||||||||||||| || |||||||| ||||| |||||||| || |||||||||||||| Sbjct 1659 ATTATTTTCTTGTGGAACAAGTAAAGAGGGAGATTCTTTCCTGGTTGAGTGGAATGAGAG 1718 Query 1897 TGAAGGTGCCCTAAAGAGGACATATTTAGGCTTTAGGAAGAAATC-AGCTGGAGT-TGTT 1954 |||||||||| |||||||||||||||| |||||||| |||||||| | | || || ||| Sbjct 1719 TGAAGGTGCCATAAAGAGGACATATTTGGGCTTTAGAAAGAAATCTA-CAGG-GTCGGTT 1776 Query 1955 CAGTTTGATACAACCCGTAACCGTTTCTTGGCTGTTGGTGAAGACAATCAAATAAAATTC 2014 |||||||||||||| || ||||| ||| |||||||||||||||| || ||| |||||||| Sbjct 1777 CAGTTTGATACAACACGAAACCGATTCATGGCTGTTGGTGAAGATAACCAAGTAAAATTC 1836 Query 2015 TGGAACATGGACAATACAAATCTTTTGACAGTTGTTGAGGCTGAAGGTGGACTTCCGAAT 2074 ||| | ||||||||||| ||| | || ||| ||| |||||||| || ||||| |||| Sbjct 1837 TGGGATATGGACAATACTAATATCTTAACAACTGTGGAGGCTGATGGAGGACTCCCGAGC 1896 Query 2075 CTACCCCGATTGAGATTCAACAAGGATGGGAATCTTCTTGCAGTTACTACAGCAGATAAT 2134 || ||||||||||||||||||||||| || || |||||||| |||| |||||| ||||| Sbjct 1897 CTTCCCCGATTGAGATTCAACAAGGAAGGAAACCTTCTTGCTGTTAGTACAGCTGATAAC 1956 Query 2135 GGATTCAAGATCCTTGCAAATACTGATGGTCTCAGAACCTTAAGAG-CATTTGAAGCGCG 2193 |||||||| |||||||| ||| |||||||| ||||||||||| | || | ||||| || Sbjct 1957 GGATTCAAAATCCTTGCTAATGGGGATGGTCTGAGAACCTTAAGGGTCA-TGGAAGCTCG 2015 Query 2194 GTCTTTTGAAGCATCTAAAGCATCCATTGATATGAAGGTATCCACCTCCGCAATGGCTT- 2252 ||||| |||||||| | |||||| | ||||||||||||||| | || ||||||| || Sbjct 2016 TTCTTTCGAAGCATCCAGAGCATCGACAGATATGAAGGTATCCTCGTCTGCAATGG-TTA 2074 Query 2253 CAAGCATCAGCCCCGCTATTGGTAAAATTGAACACATGGACGCAGGCTCTCCTGCAAGGC 2312 ||| ||| |||| ||||||||||||| ||||| ||||| |||||||||||||||| Sbjct 2075 CAAACATTGGCCCATCTATTGGTAAAATGGAACAAATGGATATTGGCTCTCCTGCAAGGC 2134 Query 2313 CAACCCCAATTCCTAATGGAATTGAGGCAATGTCAAGAACTATGGAAAAGCCAAGAAACT 2372 ||||||| |||||||| ||| |||| |||||||||||||||||||| || ||||||||| Sbjct 2135 CAACCCCTATTCCTAACGGAGTTGATGCAATGTCAAGAACTATGGAGAATCCAAGAAACG 2194 Query 2373 TGGACTCTGTTGATAAGTCTAAACCTTTAGAGCTCACAGAAATTGTTGATCC-GACTCAG 2431 |||| |||||||| ||||| ||||||| ||||||| |||||||||||||| | ||||| Sbjct 2195 TGGAGTCTGTTGAAAAGTCCAAACCTTCGGAGCTCATGGAAATTGTTGATCCTG-CTCAG 2253 Query 2432 TGCCGACAAGTGACAATGCCAGATAGCAAGGACTCTGTTAGCAAGGTTGCTCGGCTTCTT 2491 |||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||| Sbjct 2254 TGCCGACAAGTGACCATGCCAGATAGCAAGGATTCGGTTAGCAAGGTTGCTCGGCTTCTT 2313 Query 2492 TACACAAATTCTGGCGTTGGTGTTTTGGCTCTTGGATCAAATGGTGTTCAAAGACTATGG 2551 || |||||||| || ||||| |||||||||||||| |||||||||| || ||||||||| Sbjct 2314 TATACAAATTCGGGTGTTGGCATTTTGGCTCTTGGAACAAATGGTGTCCAGAGACTATGG 2373 Query 2552 AAGTGGA-TCCGCAATGAGCAAAATCCAACTGGGAAGGCAACTGCTAGTGTAACTCCACA 2610 ||||||| | |||| ||||||||||||||||||||||| || |||||||| |||||||| Sbjct 2374 AAGTGGAGT-CGCAGCGAGCAAAATCCAACTGGGAAGGCTACCGCTAGTGTCACTCCACA 2432 Query 2611 GCATTGGCAGCCAAACAGCGGTCTCCTAATGGCAAATGATGTTCCCGAGAATCCTGAAGG 2670 |||||||||||| ||||| |||||| ||||| ||||||||||||| |||||||||| ||| Sbjct 2433 GCATTGGCAGCCTAACAGTGGTCTCTTAATGACAAATGATGTTCCGGAGAATCCTG-AGG 2491 Query 2671 G-AGTGTTCCGTGTATAGCACTTTCCAAGAATGACTCATACGTAATGTCAGCTTGTGGTG 2729 | | ||| ||||| ||||| ||||| ||||||||||| || |||||||| |||||||||| Sbjct 2492 GAACTGTGCCGTGCATAGCCCTTTCTAAGAATGACTCGTATGTAATGTCTGCTTGTGGTG 2551 Query 2730 GAAAGGTTTCGTTATTCAATATGATGAC-TTTCAAAGTAATGACAACTTTCATGCCACCG 2788 |||||||||| | || ||||||||||| ||| || |||||||| |||||||||||||| Sbjct 2552 GAAAGGTTTCACTGTTTAATATGATGACATTT-AAGGTAATGACTACTTTCATGCCACCT 2610 Query 2789 CCACCAGCTTCAACTTTCTTGGCATTTCATCCTCAAGATAATAATATTATTGCAATCGGG 2848 || || ||||| || ||| ||||||||||||||||||||||||| || |||||||| ||| Sbjct 2611 CCTCCTGCTTCGACGTTCCTGGCATTTCATCCTCAAGATAATAACATCATTGCAATTGGG 2670 Query 2849 ATGGAGGACTCGAGTATACATATTTACAACGTCAGGGTAGATGAGGTGAAAACAAAGTTG 2908 |||||||| || | ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 2671 ATGGAGGATTCAACTATTCATATTTACAACGTCAGGGTAGATGAGGTGAAAACAAAGTTG 2730 Query 2909 AAAGGTCACCAGAAGCACATAACTGGTCT-AGCATTCTCTACCGCGCTCAATATTCTTGT 2967 ||||| ||||| |||||||| ||||| || |||||||||| || | ||||||||||| || Sbjct 2731 AAAGGCCACCAAAAGCACATCACTGG-CTTAGCATTCTCTGCCACTCTCAATATTCTGGT 2789 Query 2968 CTCTTCTGGTGCCGATGCTCAGCTCTTCTTCTGGACCGCTGACTCGTGGGAGAAAAAGAA 3027 ||| |||||||| ||||| ||||||||||| |||| |||||||| |||||||| ||||| Sbjct 2790 CTCCTCTGGTGCTGATGCCCAGCTCTTCTTTTGGAGTGCTGACTCATGGGAGAAGAAGAA 2849 Query 3028 ATCTTCAGCGATACAGCTACCACCTGGCAAAG-CACCAGTAGGCGACACACGAGTCCAAT 3086 ||||||||| || || |||||| |||| |||| |||||||||||||||| || ||||| | Sbjct 2850 ATCTTCAGCTATCCAACTACCAGCTGG-AAAGTCACCAGTAGGCGACACTCGTGTCCAGT 2908 Query 3087 TCCACAACGACCAAATCCAGTTATTGGTTTCACATGAGACACAGCTCGCCATTTACGATG 3146 ||||||||||||| |||| ||| ||||||| |||||||||||| | ||||| || || | Sbjct 2909 TCCACAACGACCAGGTCCATTTACTGGTTTCTCATGAGACACAGATAGCCATATATGACG 2968 Query 3147 CTTCGAAGATGGAATGCATTCATAAGTGGGTGCCCCAAGAAGCTCTCTCTTCGCCCATAA 3206 ||| |||||||| |||||||| ||||||||||| |||||| | || || || ||||||| Sbjct 2969 GTTCAAAGATGGAGTGCATTCAGAAGTGGGTGCCACAAGAATCGCTATCATCACCCATAA 3028 Query 3207 CCT-CTGCATCTTACTCATGCAACAGCCAACTGGTTTACGCGTCATTCGCTGATGGAAAC 3265 ||| | ||||||||||| |||||||| || ||||||||||| ||||| || ||||||| | Sbjct 3029 CCTGC-GCATCTTACTCCTGCAACAGTCATCTGGTTTACGCATCATTTGCAGATGGAAGC 3087 Query 3266 ATTGCAGTCTTTGATGCTGAATCCTTGAGACTCAGATGCCGCATTGCCCCATCAGCCTAC 3325 || | |||||| |||||||||| ||||||||||||||| ||||||| ||||||||||||| Sbjct 3088 ATCGGAGTCTTCGATGCTGAATACTTGAGACTCAGATGTCGCATTGGCCCATCAGCCTAC 3147 Query 3326 ATGCCTCAACCTACACCAAACAGTGCACCGATTTTCCCACAGGTGATCACAGCTCATCCA 3385 ||||| ||||| |||||||||||||| || || | |||| ||| || || |||||||| Sbjct 3148 ATGCCCCAACCCACACCAAACAGTGCTCCAATCATGCCACTGGTAATTACTGCTCATCCT 3207 Query 3386 CAAGAACCGAATCAATTAGCGGTTGGACTGTCTGATGGTTCGGTTAAAGTGATTGAG-CC 3444 ||||||||||| ||| |||| |||||||| |||||||| ||||||||||| |||| || Sbjct 3208 CAAGAACCGAACCAAATAGCTGTTGGACTCTCTGATGGATCGGTTAAAGTTCTTGAAACC 3267 Query 3445 ATCAGAAC-TTTCTAGAAGATGGGGTGTTGGCGTCGCAGCTGGTTCAGATAAAGCAGGGA 3503 | |||| ||| ||||||||||||||||| | | | ||| || ||||||| Sbjct 3268 C-CGGAACCTTT-TAGAAGATGGGGTGTTG---T-G--G-------AGA-AA-GCAGGGA 3310 Query 3504 CTGAAAATGGACGGCCGTCTAGTTCATCAGCGGCTAACAACTCAAGTTCGGATCAGATTC 3563 ||||||| |||||||| |||||| | || | |||||| ||||| | || |||||||||| Sbjct 3311 CTGAAAACGGACGGCCTTCTAGTGCGTCGGTGGCTAATAACTCTGGCTCAGATCAGATTC 3370 Query 3564 AAAGGTAA 3571 |||||||| Sbjct 3371 AAAGGTAA 3378 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 144047913805 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5