BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G19100.1 Length=2320 Score E Sequences producing significant alignments: (Bits) Value Ahg929797 jgi|Araly1|929797|scaffold_302254.1 3057 0.0 Ahg952604 jgi|Araly1|952604|scaffold_93900001.1 2139 0.0 Ahg474093 jgi|Araly1|474093|fgenesh2_kg.1__4047__AT1G49580.1 1594 0.0 Ahg486115 jgi|Araly1|486115|fgenesh2_kg.5__2107__AT3G56760.1 379 4e-104 > Ahg929797 jgi|Araly1|929797|scaffold_302254.1 Length=1853 Score = 3057 bits (1655), Expect = 0.0 Identities = 1784/1847 (97%), Gaps = 6/1847 (0%) Strand=Plus/Plus Query 178 agaagaagaagaagaaggagaagGATATATGGGAGGCTGTACTTCCAAACCTTCCTCCTC 237 ||||||||||||||||| ||||||| ||||||||| |||||||||||||| |||||||| Sbjct 4 AGAAGAAGAAGAAGAAGAAGAAGGA-CTATGGGAGGATGTACTTCCAAACCCTCCTCCTC 62 Query 238 CGTCAAACCTAATCCTTACGCACCCAAAGACGCGGTTC-TCCAAAATGACGATTCTACCC 296 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct 63 CGTCAAACCTAATCCTTACGCACCCAAAGACGCGGTTCTTCC-AAATGACGATTCTACCC 121 Query 297 CTGCTCATCCCGGGAAATCACCGGTTCGTTCATCTCCCGCCGTAAAGGCCTCTCCTTTTT 356 |||| |||||||||||||||||||||| ||| ||||||||||||||||| |||||||||| Sbjct 122 CTGCCCATCCCGGGAAATCACCGGTTCCTTCTTCTCCCGCCGTAAAGGCTTCTCCTTTTT 181 Query 357 TCCCTTTTTACACGCCTAGTCCCGCCCGGCACCGCCGTAACAAGAGCCGCGACGGCGGAG 416 |||| |||||||||||||||||||| ||||||||||||||||||||||| ||||| |||| Sbjct 182 TCCCATTTTACACGCCTAGTCCCGCTCGGCACCGCCGTAACAAGAGCCGTGACGGAGGAG 241 Query 417 GA--GG-AGAGAGTAAGAGCGTTACCAGCACTCCTCTCCGTCAGCTCGCGCGTGCTTTCC 473 || || ||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 242 GAGGGGTAGAGAGTAAGAGCGTTACCAGCACTCCGCTCCGTCAGCTCGCGCGTGCTTTCC 301 Query 474 ACCCTCCGTCACCGGCGAGACATATACGGGATGTTCTGCGGCggaggaaggagaagaagg 533 ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 302 ACCCTCCTTCACCGGCGAAACATATACGGGATGTTCTGCGGCGGAGGAAGGAGAAGAAGG 361 Query 534 aggctgctctgccggcggcgaggcagcagaaggaggaggaggagagggaAGAGGTAGGGC 593 ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| Sbjct 362 AGGCTGCTCTGCCGGCGACGAGGCAGCAGACGGAGGAGGAGGAGAGGGAAGAGGTAGGGC 421 Query 594 TGGATAAAAGATTTGGGTTTTCCAAGGAGTTACAGAGTAGGATTGAGCTAGGGGAAGAGA 653 ||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||| Sbjct 422 TGGATAAAAGATTTGGGTTCTCGAAGGAGTTACATAGTAGGATTGAGCTAGGGGAAGAGA 481 Query 654 TTGGGAGAGGGCATTTTGGGTATACTTGCTCTGCTAAGTTCAAGAAAGGAGAGCTCAAAG 713 ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 482 TTGGGCGAGGGCATTTTGGGTACACTTGCTCTGCTAAGTTCAAGAAAGGAGAGCTCAAAG 541 Query 714 ATCAGGAGGTTGCTGTTAAAGTCATCCCAAAATCTAAGATGACATCTGCAATATCTATAG 773 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 542 ATCACGAGGTTGCTGTTAAAGTCATCCCAAAATCTAAGATGACATCTGCAATATCTATAG 601 Query 774 AGGATGTGAGAAGAGAAGTGAAAATACTGCGGGCGTTATCTGGACATCAAAATTTGGTAC 833 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 602 AGGATGTGAGAAGAGAAGTGAAAATACTGCGGGTGTTATCTGGACATCAAAATTTGGTAC 661 Query 834 AATTCTATGATGCGTTCGAGGACAATGCCAACGTTTACATCGTTATGGAGTTATGTGGAG 893 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 662 AATTCTATGATGCGTTCGAGGACAATGCCAACGTTTACATCGTTATGGAGTTATGTGGAG 721 Query 894 GTGGTGAACTTCTTGACAGGATACTAGCAAGGGGAGGAAAATACTCTGAAGATGATGCAA 953 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 722 GTGGTGAACTACTTGACAGGATACTAGCAAGGGGAGGAAAATACTCTGAAGATGATGCAA 781 Query 954 AAGCAGTGCTTATACAGATCCTTAACGTCGTAGCTTTCTGTCATCTCCAAGGAGTTGTTC 1013 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 782 AAGCAGTGCTTATACAGATCCTTAACGTTGTAGCTTTCTGTCATCTCCAAGGAGTTGTTC 841 Query 1014 ATCGAGATCTAAAACCAGAGAACTTCTTGTACACTTCCAAGGAGGAGAATTCTATGTTGA 1073 |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct 842 ATCGAGATCTAAAACCAGAGAACTTCTTGTACACTTCCAAGGAGGAAAATTCTCTGTTGA 901 Query 1074 AAGTCATAGATTTTGGCTTATCGGACTTTGTCAGACCAGACGAAAGACTAAATGATATAG 1133 ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||| Sbjct 902 AAGTCATAGATTTTGGCTTATCGGATTTTGTCAGACCAGACGAAAGATTAAATGACATAG 961 Query 1134 TGGGAAGTGCATATTACGTAGCCCCTGAAGTTCTACACAGATCTTATACCACAGAAGCGG 1193 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 962 TGGGAAGTGCATATTACGTAGCCCCTGAAGTTCTACACAGATCTTATACCACGGAAGCGG 1021 Query 1194 ATGTATGGAGCATAGGAGTCATAGCATACATTCTCCTATGTGGAAGCCGTCCTTTTTGGG 1253 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1022 ATGTATGGAGCATAGGAGTAATAGCATACATTCTCCTATGTGGAAGCCGTCCTTTTTGGG 1081 Query 1254 CAAGAACTGAATCAGGAATTTTCAGAGCAGTTCTAAAAGCTGATCCCAGTTTTGATGAAC 1313 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1082 CAAGAACTGAATCAGGAATTTTCAGAGCAGTTCTAAAAGCTGATCCGAGTTTTGATGAAC 1141 Query 1314 CTCCTTGGCCTTCGTTATCCTTTGAGGCAAAAGATTTTGTTAAGAGATTATTGTACAAGG 1373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1142 CTCCTTGGCCTTCGTTATCCTTTGAGGCAAAAGATTTTGTTAAGAGATTATTGTACAAGG 1201 Query 1374 ACCCTCGGAAAAGAATGACTGCATCTCAAGCTTTGATGCATCCTTGGATCGCGGGTTATA 1433 ||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||| Sbjct 1202 ACCCTCGGAAAAGAATGACGGCCTCTCAAGCTTTGATGCATCCTTGGATTGCGGGTTATA 1261 Query 1434 AGAAAATAGATATCCCATTTGATATTCTGATCTTCAAGCAGATCAAAGCATACTTGAGAT 1493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1262 AGAAAATAGATATCCCATTTGATATTCTGATCTTCAAGCAGATCAAAGCATACTTGAGAT 1321 Query 1494 CTTCGTCTTTGCGCAAAGCTGCTTTGATGGCTCTGTCCAAGACATTAACTACCGATGAAC 1553 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1322 CTTCGTCTTTGCGCAAAGCTGCTTTGATGGCTCTGTCCAAGACATTAATTACCGATGAAC 1381 Query 1554 TTCTTTATCTGAAAGCGCAGTTTGCACACTTAGCACCCAACAAAAATGGCCTCATCACTT 1613 ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| Sbjct 1382 TTCTTTATCTGAAAGCGCAGTTTGCACTCTTAGCACCCAACAATAATGGCCTCATCACTT 1441 Query 1614 TAGATAGCATCAGACTGGCACTTGCGACAAATGCAACAGAAGCAATGAAGGAATCACGGA 1673 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1442 TAGATAGCATCAGACTGGCACTTGCTACAAATGCAACAGAAGCAATGAAGGAATCACGGA 1501 Query 1674 TCCCGGACTTTCTTGCATTGTTAAATGGACTTCAATACAAAGGGATGGATTTTGAAGAGT 1733 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1502 TCCCGGACTTTCTTGCGTTGTTAAATGGACTTCAATACAAAGGGATGGATTTTGAAGAGT 1561 Query 1734 TTTGTGCAGCTTCCATTAGCGTTCATCAGCATGAGTCTCTTGATTGTTGGGAGCAGAGCA 1793 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1562 TTTGTGCAGCTTCCATTAGCGTTCATCAGCATGAGTCTCTTGATTGTTGGGAGCAGAGCA 1621 Query 1794 TTCGTCATGCTTATGAGCTATTTGAAATGAATGGAAACCGAGTTATCGTCATCGAAGAAC 1853 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1622 TTCGTCATGCTTATGAGCTATTTGAAATGAATGGAAACCGAGTTATCGTCATCGAAGAAC 1681 Query 1854 TCGCTTCTGAACTTGGTGTTGGATCATCCATCCCGGTTCATACCATTCTAAATGACTGGA 1913 ||||||| |||||||||||||||||||| |||||||| |||||||||||| ||||||||| Sbjct 1682 TCGCTTCCGAACTTGGTGTTGGATCATCGATCCCGGTCCATACCATTCTACATGACTGGA 1741 Query 1914 TAAGACATACTGACGGGAAGCTGAGTTTCTTGGGTTTTGTCAAACTGCTGCACGGTGTCT 1973 ||||||| || || ||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1742 TAAGACACACAGATGGGAAGCTGAGTTTCTTGGGTTTTGTCAAACTGTTGCACGGTGTCT 1801 Query 1974 CGACTCGACAATCTTTAGCGAAAACGCGATGAGGAAAGTGACTCGGT 2020 | ||| ||||| | ||||||||||| |||||| |||||| ||||||| Sbjct 1802 CTACTAGACAACCATTAGCGAAAACACGATGAAGAAAGTAACTCGGT 1848 > Ahg952604 jgi|Araly1|952604|scaffold_93900001.1 Length=1295 Score = 2139 bits (1158), Expect = 0.0 Identities = 1237/1276 (97%), Gaps = 1/1276 (0%) Strand=Plus/Plus Query 750 AGATGACATCTGCAATATCTATAGAGGATGTGAGAAGAGAAGTGAAAATACTGCGGGCGT 809 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 20 AGATGACATCTGCAATATCTATAGAGGATGTGAGAAGAGAAGTGAAAATACTGCGGGCGT 79 Query 810 TATCTGGACATCAAAATTTGGTACAATTCTATGATGCGTTCGAGGACAATGCCAACGTTT 869 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 80 TATCTGGACATCAAAATTTGGTACAATTCTACGATGCGTTCGAGGACAATGCCAACGTTT 139 Query 870 ACATCGTTATGGAGTTATGTGGAGGTGGTGAACTTCTTGACAGGATACTAGCAAGGGGAG 929 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 140 ACATCGTTATGGAGTTATGTGGAGGTGGTGAACTCCTTGACAGGATACTAGCAAGGGGAG 199 Query 930 GAAAATACTCTGAAGATGATGCAAAAGCAGTGCTTATACAGATCCTTAACGTCGTAGCTT 989 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 200 GAAAATACTCTGAAGATGATGCAAAAGCAGTGCTTATACAGATCCTTAACGTTGTAGCTT 259 Query 990 TCTGTCATCTCCAAGGAGTTGTTCATCGAGATCTAAAACCAGAGAACTTCTTGTACACTT 1049 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 260 TCTGTCATCTCCAAGGAGTTGTTCATCGAGATCTAAAACCAGAGAACTTCTTGTACACTT 319 Query 1050 CCAAGGAGGAGAATTCTATGTTGAAAGTCATAGATTTTGGCTTATCGGACTTTGTCAGAC 1109 ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| Sbjct 320 CCAAGGAGGAGAATTCTCTGTTGAAAGTCATAGATTTTGGCTTATCGGATTTTGTCAGAC 379 Query 1110 CAGACGAAAGACTAAATGATATAGTGGGAAGTGCATATTACGTAGCCCCTGAAGTTCTAC 1169 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 380 CAGACGAAAGATTAAATGACATAGTGGGAAGTGCATATTACGTAGCCCCTGAAGTTCTAC 439 Query 1170 ACAGATCTTATACCACAGAAGCGGATGTATGGAGCATAGGAGTCATAGCATACATTCTCC 1229 ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| Sbjct 440 ACAGATCTTATACCACAGAAGCGGATGTATGGAGCATAGGAGTAATAGCATACGTTCTCC 499 Query 1230 TATGTGGAAGCCGTCCTTTTTGGGCAAGAACTGAATCAGGAATTTTCAGAGCAGTTCTAA 1289 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 500 TATGTGGAAGCCGTCCTTTTTGGGCAAGAACTGAATCAGGAATTTTCAGAGCAGTTCTAA 559 Query 1290 AAGCTGATCCCAGTTTTGATGAACCTCCTTGGCCTTCGTTATCCTTTGAGGCAAAAGATT 1349 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 560 AAGCTGATCCGAGTTTTGATGAACCTCCTTGGCCTTCGTTATCCTTTGAGGCAAAAGATT 619 Query 1350 TTGTTAAGAGATTATTGTACAAGGACCCTCGGAAAAGAATGACTGCATCTCAAGCTTTGA 1409 ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct 620 TTGTTAAGAGATTATTGTACAAGGACCCTCGGAAAAGAATGACAGCCTCTCAAGCTTTGA 679 Query 1410 TGCATCCTTGGATCGCGGGTTATAAGAAAATAGATATCCCATTTGATATTCTGATCTTCA 1469 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 680 TGCATCCTTGGATCGCGGGTTATAAGAAAATAGATATCCCATTTGATATTCTAATCTTCA 739 Query 1470 AGCAGATCAAAGCATACTTGAGATCTTCGTCTTTGCGCAAAGCTGCTTTGATGGCTCTGT 1529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 740 AGCAGATCAAAGCATACTTGAGATCTTCGTCTTTGCGCAAAGCTGCTTTGATGGCTCTGT 799 Query 1530 CCAAGACATTAACTACCGATGAACTTCTTTATCTGAAAGCGCAGTTTGCACACTTAGCAC 1589 |||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct 800 CCAAGACATTAATTACCAATGAACTTCTTTATCTGAAAGCGCAGTTTGCACTCTTAGCAC 859 Query 1590 CCAACAAAAATGGCCTCATCACTTTAGATAGCATCAGACTGGCACTTGCGACAAATGCAA 1649 |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| Sbjct 860 CCAACAAAAATGGCCTCATCACTTTAGATAGCATCAAACTGGCACTTGCTACAAATGCAA 919 Query 1650 CAGAAGCAATGAAGGAATCACGGATCCCGGACTTTCTTGCATTGTTAAATGGACTTCAAT 1709 |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct 920 CAGAAGCAATGAAGGAATCACGGATCCCGGACTTTCTTGCGTTGTTAAATGGACTCCAAT 979 Query 1710 ACAAAGGGATGGATTTTGAAGAGTTTTGTGCAGCTTCCATTAGCGTTCATCAGCATGAGT 1769 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 980 ACAAAGGGATGGATTTTGAAGAGTTTTGTGCAGCTTCCATTAGCGTTCATCAGCATGAGT 1039 Query 1770 CTCTTGATTGTTGGGAGCAGAGCATTCGTCATGCTTATGAGCTATTTGAAATGAATGGAA 1829 |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct 1040 CTCTTGATTGTTGGGAGCAGAGCATTCGTCATGCTTATGAACTATTCGAAATGAATGGAA 1099 Query 1830 ACCGAGTTATCGTCATCGAAGAACTCGCTTCTGAACTTGGTGTTGGATCATCCATCCCGG 1889 |||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||| Sbjct 1100 ACCGAGTTATCGTCATTGAAGAGCTCGCTTCTGAACTTGGTGTTGGATCATCTATCCCGG 1159 Query 1890 TTCATACCATTCTAAATGACTGGATAAGACATACTGACGGGAAGCTGAGTTTCTTGGGTT 1949 | |||||||||||| |||||||||||||||| || || |||||||||||||||||||||| Sbjct 1160 TCCATACCATTCTACATGACTGGATAAGACACACAGATGGGAAGCTGAGTTTCTTGGGTT 1219 Query 1950 TTGTCAAACTGCTGCACGGTGTCTCGACTCGACAATCTTTAGCGAAAACGCGATGAGGAA 2009 ||||||||||| ||||||||||||| ||| ||||| | ||||||||||| |||||| ||| Sbjct 1220 TTGTCAAACTGTTGCACGGTGTCTCTACTAGACAACCATTAGCGAAAACACGATGAAGAA 1279 Query 2010 AGTGACTC-GGTGTTA 2024 ||| |||| ||||||| Sbjct 1280 AGTTACTCAGGTGTTA 1295 > Ahg474093 jgi|Araly1|474093|fgenesh2_kg.1__4047__AT1G49580.1 Length=2138 Score = 1594 bits (863), Expect = 0.0 Identities = 1528/1836 (83%), Gaps = 98/1836 (5%) Strand=Plus/Plus Query 201 GATATATGGGAGGCTGTACTTCCAAA-CCTTC-C-TCCTCCGTCAAACCTAATCCTTACG 257 ||| ||||||||||||||| |||||| ||| | | ||||||| || |||||| |||| || Sbjct 130 GAT-TATGGGAGGCTGTACCTCCAAACCCTCCACTTCCTCCGGCAGACCTAACCCTTTCG 188 Query 258 CACC---CAAAGACGCGGTTCTCCAAAATGACGATTCTACCCCTG-CTCATCCCGGGAAA 313 | || ||| || | | || |||| |||||||| | |||||| | |||||||| ||| Sbjct 189 CTCCTGGCAATGA--CTATCCT-CAAATTGACGATTTTGCCCCTGAC-CATCCCGGTAAA 244 Query 314 TCACCGGTTCGTTCATCTCCCGCCGTAAAGGCCTCTCCTTT-TTTCCCTTTTTACACGCC 372 ||||| ||| | | || |||||| |||| |||||||||| |||||| ||||||||||| Sbjct 245 TCACCACTTCCTACCCCTTCCGCCGCAAAGTCCTCTCCTTTCTTTCCC-TTTTACACGCC 303 Query 373 TAGTCCC-GCCCGGCACCGCCGTAACAAGAGCCGCGA---CGGC------GGAGGAGGAG 422 || ||| || || ||||||||||| ||||||||||| |||| |||||||||| Sbjct 304 GAG-CCCTGCTCGCCACCGCCGTAATAAGAGCCGCGACGTCGGCGGAGGAGGAGGAGGAG 362 Query 423 AGAGTAAGAGCGTT-ACCAGCACTCCTCTCCGTCAGCT-CGCGCGTGC-TTTCCACCCTC 479 ||||||||||| || || ||||| || || ||||| | ||| ||||| ||| ||||||| Sbjct 363 AGAGTAAGAGC-TTGACTAGCACGCCGCTTCGTCAATTACGC-CGTGCGTTT-CACCCTC 419 Query 480 CGTCACCGGCGAGACATATACGGGATGTTCTGCGGCggaggaaggagaagaaggaggctg 539 |||| ||||||| ||| ||||||| | || ||||||||||||| ||| ||||| |||| Sbjct 420 CGTCTCCGGCGAAACACATACGGGCGGCGCTACGGCGGAGGAAGGGGAAAAAGGAAGCTG 479 Query 540 ctctgccggcggcgaggcagcagaagga-ggag-----g-ag-gaga-g-ggaAGAGG-- 587 || | ||||||||| ||||| || || |||| | | | || | |||||||| Sbjct 480 CTTTATCGGCGGCGACGCAGC-TAACGACGGAGATCCCGCCGCGGGAGGAGGAAGAGGAA 538 Query 588 -TAGGGCTGGATAAAAGATTTGGGTTTTCCAAGGAGTTACAGAGTAGGA-TTGAGCTAGG 645 | ||||| || ||||||||||| ||||| || ||||| || |||| || | || |||| Sbjct 539 TTGGGGCTTGACAAAAGATTTGGTTTTTCTAAAGAGTTTCACAGTA-GAGTAGAATTAGG 597 Query 646 GGAAGAGATTGGGA-GAGGGCATTTTGGGTATACTTGCTCTGCTAAG-TTCAAGAAAGGA 703 |||||||||| ||| |||||||||||||||| |||||||||||| || |||||||||||| Sbjct 598 GGAAGAGATT-GGACGAGGGCATTTTGGGTACACTTGCTCTGCT-AGATTCAAGAAAGGA 655 Query 704 GAGCTCAAAGATCAGGA-GGTTGCTGTTAAAGTCATCCCAAAATCTAAGATGACATCTGC 762 |||||||||| ||| | ||||||||||||| ||||||||||||||||||||||| |||| Sbjct 656 GAGCTCAAAGGTCA-AATGGTTGCTGTTAAAATCATCCCAAAATCTAAGATGACAACTGC 714 Query 763 AATAT-CTATAGAGGATGTGAGAAGAGAAGTGAAAATACTGCGGGCGTTATCTGGACATC 821 ||| | ||||||| ||||||||||| ||||||||||| || | ||| |||||||||||| Sbjct 715 AAT-TGCTATAGAAGATGTGAGAAGGGAAGTGAAAATTCTACAGGCTTTATCTGGACAT- 772 Query 822 AA-AATTTGGTACAATTCTATGATGCGTTCGAGGACAATGCCAACGTTTACATCGTTATG 880 || ||| |||| |||||||||||||| || ||||||||||| || || ||||| | ||| Sbjct 773 AAGAATCTGGTTCAATTCTATGATGCATTTGAGGACAATGCAAATGTCTACATTGCGATG 832 Query 881 GAGTTATGTGGAGGTGGTGAACTTCTTGACAGGATACTAGCAAGGGGAGGAAAATACTCT 940 |||||||||| ||||||||||||||| ||||| ||||||||||||||||| |||||||| Sbjct 833 GAGTTATGTGAAGGTGGTGAACTTCTGGACAGAATACTAGCAAGGGGAGGGAAATACTC- 891 Query 941 GAAG-ATGATGCAAAAGCAGTGCTTATACAGATCCTTAACGTCGTAGCTTTCTGTCATCT 999 | || ||||||||||| ||||| ||||||| ||||| | || |||||||| |||||||| Sbjct 892 GGAGAATGATGCAAAACCAGTGATTATACAAATCCTGCATGTGGTAGCTTTTTGTCATCT 951 Query 1000 CCAAGGAGTTGTTCATCGAGATCTAAAACCAGAGAACTTCTTGTACACTTCCAAGGAGGA 1059 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct 952 CCAAGGAGTTGTTCATCGAGACCTTAAACCAGAGAACTTCTTGTACACTTCCAAGGAGGA 1011 Query 1060 GAATTCT-ATG-TTGAAAGTC-ATAGATTTTGGCTTATCGGACTTTGTCAGACCAGACGA 1116 ||||||| | | || |||| | ||||| ||||||||||| ||||||||||||||||| || Sbjct 1012 GAATTCTCA-GCTT-AAAG-CGATAGACTTTGGCTTATCAGACTTTGTCAGACCAGATGA 1068 Query 1117 AAGACTAAATGATATAGTGGGAAGTGCATATTACGTAGCCCCTGAAGTTCTACACAGATC 1176 |||||| || |||||||| |||||||| || |||||||| |||||||||||||||||||| Sbjct 1069 AAGACTCAACGATATAGTAGGAAGTGCGTACTACGTAGCTCCTGAAGTTCTACACAGATC 1128 Query 1177 TTATACCACAGAAGCGGATGTATGGAGCATAGGAGTCATAGCATACATTCTCCTATGTGG 1236 ||||| |||||||||||||| |||||||| |||||||||||||||||||| |||||||| Sbjct 1129 ATATACAACAGAAGCGGATGTGTGGAGCATCGGAGTCATAGCATACATTCTACTATGTGG 1188 Query 1237 AAGCCGTCCTTTTTGGGCAAGAACTGAATCAGGAATTTTCAGAGCAGTTCTAAAAGCTGA 1296 |||||||| |||||||||||||||||||| |||||||||||||| ||||| |||||||| Sbjct 1189 TAGCCGTCCGTTTTGGGCAAGAACTGAATCCGGAATTTTCAGAGCGGTTCTTAAAGCTGA 1248 Query 1297 TCCC-AGTTTTGATGAACCTCCTTGGCC-TTCGTTATCCTT-TGAGGCAAAAGATTTTGT 1353 ||| ||||| ||||||||||||||||| ||| || || || ||| || ||||| ||||| Sbjct 1249 -CCCGAGTTTCGATGAACCTCCTTGGCCCTTC-TTGTC-TTCTGACGCTAAAGACTTTGT 1305 Query 1354 TAAGAGATTATTGTACAAGGA-CCCTCGGAAAAGAATGACTGCATCTCAAGCTTTGATGC 1412 |||| | ||||||| ||||| ||| |||| ||||||| | || || ||||| ||||||| Sbjct 1306 TAAGCGGTTATTGTTTAAGGATCCC-CGGAGAAGAATGTCAGCCTCCCAAGCCTTGATGC 1364 Query 1413 ATCCTTGGATCGCG-GGTTATAAGAA--A-ATAGA-TATCCCATTT-GATATTCT-GATC 1465 ||||||||||| || |||||||| | | || || |||||| ||| ||||| || |||| Sbjct 1365 ATCCTTGGATC-CGAGGTTATAATACGGACAT-GAATATCCC-TTTCGATAT-CTTGATC 1420 Query 1466 TTCAAGCAGATCAAAGCATACTTGAGATCTTCGTCTTTGCGCAAAGCTGCTTTGATGGCT 1525 || | |||||| || || |||||| ||||||| || || |||||||||||||||| ||| Sbjct 1421 TTTAGGCAGATGAAGGCGTACTTGCGATCTTCTTCATTACGCAAAGCTGCTTTGAGGGCG 1480 Query 1526 CTGTCCAAGACATTAA-CTACCGATGAACTTCTTTATCTGAAAGCGCAGTTTGCACA-CT 1583 ||||||||||| |||| | | |||||| ||||||| |||||| | || ||| | | || Sbjct 1481 CTGTCCAAGACGTTAATCAAG-GATGAAATTCTTTACCTGAAAACTCAATTTTCTCTTCT 1539 Query 1584 TAGCACCCAACAAAAATGGCCTCATCACTTTAGATAGCATCAGACTGGCACTTGCGA-CA 1642 ||||| |||||| ||||||| ||||| | |||| ||| ||| |||||||||| | || Sbjct 1540 C-GCACCAAACAAAGATGGCCTAATCACAATGGATACCATTAGATTGGCACTTGCAAGCA 1598 Query 1643 AATGCAACAGAAGCAATGAAGGAATCACGGATCCCGGACTTTCTTGCATTGTTAAATGGA 1702 | |||||||||||||||||| ||||| |||||||| || ||||| || ||| |||||||| Sbjct 1599 A-TGCAACAGAAGCAATGAAAGAATCTCGGATCCCAGAGTTTCTCGCTTTGCTAAATGGA 1657 Query 1703 CTTCAATACAAAGGGATGGATTTTGAAGAGTTTTGTGCAGCTTCCATTAGCGTTCATCAG 1762 || ||||||| ||| |||||||| |||||||||||||||||| |||| | |||||||||| Sbjct 1658 CTGCAATACAGAGGAATGGATTTCGAAGAGTTTTGTGCAGCTGCCATAAACGTTCATCAG 1717 Query 1763 CATGAGTCTCTTGATTGTTGGGAGCAGAGCATTCGTCATGCTTATGAGCTATTT-GA-AA 1820 || ||||| |||||||||||||| ||||||||||| |||||||||||||| ||| || || Sbjct 1718 CACGAGTCGCTTGATTGTTGGGAACAGAGCATTCGACATGCTTATGAGCT-TTTCGACAA 1776 Query 1821 TGAATGGAAACCGAGTTATCGTCATCGAAGAACTCGCTTCTGAACTTGGTGTTGGATCAT 1880 |||||||||||||| ||| ||||| |||||||| || |||||||||||||||||| ||| Sbjct 1777 -GAATGGAAACCGAGCTATTGTCATTGAAGAACTTGCCTCTGAACTTGGTGTTGGACCAT 1835 Query 1881 CCAT-CCCGGTTCATACCATTCTAAATGACTGGATAAGACATACTGACGGGAAGCTGAGT 1939 | || |||| | ||| | ||||| |||| ||||| ||||| ||||| |||||||| || Sbjct 1836 CTATACCCG-TACATTCGGTTCTACATGATTGGATCAGACACACTGATGGGAAGCTAAGC 1894 Query 1940 TTCTT-GGGTTTTGTCAAACTGCTGCACGGTGTCTC 1974 ||||| |||||| || |||||| | || || ||||| Sbjct 1895 TTCTTCGGGTTT-GTTAAACTGTTACATGGAGTCTC 1929 > Ahg486115 jgi|Araly1|486115|fgenesh2_kg.5__2107__AT3G56760.1 Length=1813 Score = 379 bits (205), Expect = 4e-104 Identities = 990/1355 (73%), Gaps = 110/1355 (8%) Strand=Plus/Plus Query 660 GAGGGCATTTTGGGTATACTTGCTCTGCTAAGTTCAAGAAAGGAGAGCTC-AAAGATCAG 718 |||||||||||||||||||||||||||||||| || ||||| |||| |||| ||| Sbjct 395 GAGGGCATTTTGGGTATACTTGCTCTGCTAAGGGGAAAAAAGGT-AGCTTGAAAGGTCAA 453 Query 719 GAGGTTGCTGTTAAAGTCAT-CCCAAAATCTAAGATGAC-ATCTGCAATAT-CTATAGAG 775 || || ||||| ||||| || |||||| || |||||||| | | ||||| | | || ||| Sbjct 454 GATGTGGCTGTCAAAGTTATTCCCAAA-TCCAAGATGACTA-CGGCAAT-TGCAATTGAG 510 Query 776 GATGTGAGAAGAGAAGTGAAAATACTGCGGGCGTT-ATCTGGACATCAA-AATTTGGTAC 833 ||||| |||||||||||||| ||| ||||||| || | |||| || ||| || | || | Sbjct 511 GATGTTAGAAGAGAAGTGAAGATATTGCGGGCTTTGA-CTGGTCA-CAAGAACCTAGTCC 568 Query 834 AATTCTATGATGCGTTCGAGGACAATGCCAACGTTTACATCGTTATGGAGTTATGTGGAG 893 | |||||||| || ||||| || ||| || |||||||| || ||||||||||| || Sbjct 569 AGTTCTATGACGCCTTCGAAGATGATGAAAATGTTTACATTGTGATGGAGTTATGCCAAG 628 Query 894 GTGGTGAACTTCTTG-ACAGGATACTAGCAA-GGGGAGGAAAATACTCTGAAG-ATGATG 950 | ||||||||| ||| ||| |||||| ||| ||||||| |||||||| |||| | |||| Sbjct 629 GCGGTGAACTT-TTGGACAAGATACTT-CAAAGGGGAGGCAAATACTCAGAAGTA-GATG 685 Query 951 C-AAAAGCAGTGCTTATACAGATCCTTAACGTCGTAGCTTTCTGTCATCTCCAAGGAGTT 1009 | |||| ||| | | ||||| |||| || ||||| | ||||||||| ||||| || Sbjct 686 CTAAAAA-AGTAATGGTTCAGATTCTTAGTGTAGTAGCCTACTGTCATCTTCAAGGCGTG 744 Query 1010 GTTCATCGAGATCTAAAACCAGAGAACTT-CT-TGTACACTTCCAAGGAGGAGAATTCTA 1067 |||||||| || || ||||||||||| || || | | |||| | ||||| ||| |||| Sbjct 745 GTTCATCGTGACCTCAAACCAGAGAATTTTCTCT-T-CACTACAAAGGATGAGTCTTCTC 802 Query 1068 -TGTTGAAAGTCATAGATTTTGG-CTTATCGGACTTTGTCAGACCAGACGAAAGACTAAA 1125 | | ||||| ||| |||||||| || || |||| |||||| ||||| || || | || Sbjct 803 CTCT-GAAAGCCATTGATTTTGGTCTC-TCTGACTATGTCAGGCCAGATGAGAGGTTGAA 860 Query 1126 TGATATAGTGGGAAGTGCATATTACGTAGCCCCTGAAGTTCTACACAG-ATCTTATACCA 1184 ||| || || |||||||| |||||||| |||||||||||| ||||| | | | ||| | Sbjct 861 TGACATTGTAGGAAGTGCTTATTACGTGGCCCCTGAAGTTTTACACCGTA-CATATGGAA 919 Query 1185 CAGAAGCGGATGTATGGAGCATAGGAGTCATAGCATACATTCTCCTATGTGGAAGCCGTC 1244 | || || ||| | ||||| || ||||| || || || || || || ||||| ||||| | Sbjct 920 CTGAGGCAGATATGTGGAGTATTGGAGTGATTGCTTATATACTTCTCTGTGGTAGCCGGC 979 Query 1245 CTTTTTGGGCAAGAACTGAATCAGGAATTTTCAGAGCAGTTCTAAAAGCTGATCCCAGTT 1304 | |||||||| | ||||||| ||||| ||| |||| ||||| ||||| || |||| || Sbjct 980 CATTTTGGGCCCGTTCTGAATCTGGAATCTTCCGAGCTGTTCTTAAAGCAGAACCCAATT 1039 Query 1305 TTGATGAACCTCCTTGGCCTTCG-TTATC-CTTTGAGGCAAAAGATTTTGTTAAGA-GAT 1361 | || ||| |||||||||| || || || | | || || ||||||||| || | | | Sbjct 1040 TCGAAGAAGCTCCTTGGCCATCTATT-TCACCT-GACGCTGTAGATTTTGTGAA-ACGTT 1096 Query 1362 TATTGTACAAGGACC-CTCGGAAAAGAATGACTGCAT-CTCAAGCTTTGATGC-ATCCTT 1418 | || | || || | || || ||| | ||||| | | || |||||| ||| |||||| Sbjct 1097 TGTTAAATAAAGATTAC-CGTAAGAGACTAACTGC-TGCACAGGCTTTG-TGCCATCCTT 1153 Query 1419 GGATCGCGGGTTATAA-GAA--AATAGATATCCCATTTGATATTCTGATCTT-CAAGCA- 1473 || | | || | | ||| || ||||| || || |||||| | || || ||||| Sbjct 1154 GGCTTGTTGGCTCGCATGAATTAA-AGATA-CC-ATCTGATATGATCAT-TTACAAGCTT 1209 Query 1474 GATCAAAGCATACTTGA-GATCTTCGTCTTTGCGCAAAGCTGCTTT-GATGGCTCT-GTC 1530 | | |||| |||| | | | || ||||||||| | ||| | ||||| | |||||| | | Sbjct 1210 G-TAAAAGTATACATAATG-TCGTCGTCTTTGAGAAAATCGGCTTTAGC-GGCTCTTG-C 1265 Query 1531 CAAGACATTAAC--TACCG-ATGAACTT-CTTTATCTGAAAGCGCAGTTTGCA-CACTTA 1585 ||| || ||||| ||||| | | || ||| || || ||| ||||||| | | ||| Sbjct 1266 CAAAACTTTAACAGTACCGCA-G--CTGACTT-ATTTGCAAGAGCAGTTTA-ATCTGTTA 1320 Query 1586 GCACCCAACAAAAATGGCCTCATCACTTTAGAT--AGCAT--CAGA-CTGGC-A-CTTGC 1638 | ||| | |||||| || | || | | | ||| || || || | | | | | |||| Sbjct 1321 GGACCGAGCAAAAACGGA-T-AT-A-TCTCGATGCAGAATTACAAAACAG-CTATCTTGA 1375 Query 1639 GACAAATGCAACAGAAGCAATGAAGGAATCACG-GATCCCGGACTTTCTTG-CATTG-TT 1695 | | | || ||||||| | ||||| ||||| | || ||| ||| | ||| | || Sbjct 1376 -AGAGCTCCA-CAGAAGCTACAAAGGATTCACGAG-TCTTGGATTTTGTACACAT-GATT 1431 Query 1696 AAATGGACTTCAATACAAAGGGA-TGGATTTTGAAGAGTTTTGTGCAGCTTC--CATTA- 1751 | || ||||| ||||| | | | || |||||||||||||| | ||||| | ||| Sbjct 1432 AGTTGT-CTTCAGTACAA-GAAACTAGACTTTGAAGAGTTTTG--C-GCTTCAGCTTTAA 1486 Query 1752 GCGTTCATCAGC-ATGA-GTCTCTTGATTGTTGGGAGCAGAGCATTC--GTCATGCTTAT 1807 | ||| |||||| | || | | | || ||||||||| | ||| | | ||||| ||| Sbjct 1487 GTGTTTATCAGCTA-GAAG-CAATGGAAACTTGGGAGCA-A-CATGCACGCCATGCATAT 1542 Query 1808 GAGCTATTTGA-AATGAATGGAAACCGAGTTATCGTCATCGAAGAACTCGCTTCTGAACT 1866 ||| | ||||| || || ||| ||| |||| || | ||||||||||| || | ||||| Sbjct 1543 GAGTTGTTTGAGAAGGA-TGGGAACAGAGTCATTATGATCGAAGAACTTGCCACGGAACT 1601 Query 1867 TGGTGTTGGATC-ATCCATCCCGGTTCATACCATTCTA-AATGACTGGATAAGACATACT 1924 || | || || ||| | || ||||| |||| || || |||||||||||| || Sbjct 1602 CGGACTCGG-TCCATCGGTGCCTGTTCAGGTTGTTCTTCAA-GATTGGATAAGACATTCT 1659 Query 1925 GACGGGAAGCTGAGTTTCTTGGGTTTTGTCAAACT 1959 || |||||||| ||||||||||||||||||| ||| Sbjct 1660 GATGGGAAGCTAAGTTTCTTGGGTTTTGTCAGACT 1694 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 87379022030 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5