BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G21780.1 Length=1491 Score E Sequences producing significant alignments: (Bits) Value Ahg342328 jgi|Araly1|342328|fgenesh1_pg.C_scaffold_3002091 819 0.0 Ahg930144 jgi|Araly1|930144|scaffold_302601.1 625 3e-178 Ahg493362 jgi|Araly1|493362|fgenesh2_kg.7__2795__AT4G15260.1 422 5e-117 Ahg946800 jgi|Araly1|946800|scaffold_703029.1 414 8e-115 > Ahg342328 jgi|Araly1|342328|fgenesh1_pg.C_scaffold_3002091 Length=1182 Score = 819 bits (443), Expect = 0.0 Identities = 619/701 (88%), Gaps = 23/701 (3%) Strand=Plus/Plus Query 5 ATGAAAATAGAGCTAGTATTCATTCCCTCTCCGGCAATTAGTCATCTCATGGCGACGGTA 64 |||||||| |||||| |||| ||||| ||||| || || |||||||||||| | ||||| Sbjct 1 ATGAAAATTGAGCTAATATTGATTCCTTCTCCCGCGATCAGTCATCTCATGTCTACGGTG 60 Query 65 GAGATGGCGGAGCAACTAGTTGATAAAAACGACAACCTCTCTATCACCGTAATCATCATA 124 ||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||| Sbjct 61 GAGATGGCGGAGCGACTAGTTGATCTAAACGACCACCTCTCTATCACCGTAATCATCATA 120 Query 125 TCTTTTAGTTCTAAAAATACATCCATGATCACCTCTCT---TA---CATCCAACAACCGC 178 ||||| | |||| ||| || || |||||| ||||||| | ||||||| || || Sbjct 121 TCTTTCAATTCTCAAAGCACCTCGATGATCGCCTCTCTCACCACCGCATCCAATAAACGA 180 Query 179 CTCCGGTACGAAATAATCTCCGGAGGAGATCAACAACCAACGGAGCTCAAAGCAACTGAT 238 |||| |||||||||||||| ||||||||||||||||| || ||||||| ||| |||||| Sbjct 181 ATCCGCTACGAAATAATCTCTGGAGGAGATCAACAACCCACAGAGCTCAGAGCGACTGAT 240 Query 239 TCCCACATCCAAAGTCTAAAGCCACTGGTGAGAGACGCGGTTGCTAAACTCGTAGATTCC 298 ||||||||||||||||||||||||||||||||||| || ||||| |||||||||||| || Sbjct 241 TCCCACATCCAAAGTCTAAAGCCACTGGTGAGAGATGCTGTTGCGAAACTCGTAGAT-CC 299 Query 299 -ACTCTACCAGACGCGCCTCGTCTTGCGGGATTCGTTGTTGACATGTACTGCACGTCGAT 357 |||| ||||||| ||||||||||||||||||||| || |||||||||||||||||||| Sbjct 300 GACTCGACCAGACTTGCCTCGTCTTGCGGGATTCGTCGTCGACATGTACTGCACGTCGAT 359 Query 358 GATCGATGTCGCTAACGAATTTGGCGTCCCTAGTTACTTGTTTTACACCTCTAACGCTGG 417 ||||||||||||| |||||||||| |||||||||||||||||||||||||| || ||||| Sbjct 360 GATCGATGTCGCTGACGAATTTGGAGTCCCTAGTTACTTGTTTTACACCTCCAATGCTGG 419 Query 418 ATTTCTTGGACTTTTGCTTCACATTCAGTTCATGTACGA-T--G---CAGAGGATATCTA 471 |||||| |||||||||||||||||||| ||||||||||| | | ||||||||| ||| Sbjct 420 ATTTCTCGGACTTTTGCTTCACATTCAATTCATGTACGACTTAGAGTCAGAGGATACCTA 479 Query 472 TGACATGAGCGAATTAGAAGACTCTGACGTAGAGTTGGTGGTTCCGAGTTTGACTAGTCC 531 ||||||||| | |||||||||||| |||| ||||||||||||||||||||||| || ||| Sbjct 480 TGACATGAGTGGATTAGAAGACTCGGACGCAGAGTTGGTGGTTCCGAGTTTGATTAATCC 539 Query 532 TTATCCGTTGAAATGT--CTTCCTTA--C---A--TTTTCAAATCAAAAGAGTGGCTCAC 582 |||||||||||||||| |||||||| | | ||||||||||||||||||||||||| Sbjct 540 TTATCCGTTGAAATGTGTCTTCCTTAATCCTTACATTTTCAAATCAAAAGAGTGGCTCAC 599 Query 583 tttttttGTAACTCAAGCGAGAAGATTCAGAGAAACTAAGGGCATTTTGGTAAACACGGT 642 ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct 600 TTTTTTTGTAACTCAAGCGAGAAGATTCAGAGAGACTAAGGGCATTTTGGTAAATACGGT 659 Query 643 TCCTGACTTGGAACCTCAAGCGTTGACGTTTCTTTCCAATG 683 |||||||||||| ||||||||||||| |||||| ||||||| Sbjct 660 TCCTGACTTGGAGCCTCAAGCGTTGAAGTTTCTCTCCAATG 700 Score = 595 bits (322), Expect = 3e-169 Identities = 424/473 (90%), Gaps = 8/473 (2%) Strand=Plus/Plus Query 809 GTGTTCCTCTGTTTCGGGAGCATGGGAGGGTTCAGTGAGGAACAAGTGAGAGAAACCGCA 868 ||||||||||| |||||||| |||||||| |||||||| ||||||| ||||||| ||| Sbjct 700 GTGTTCCTCTGCTTCGGGAGTATGGGAGGCTTCAGTGACGAACAAGCAAGAGAAATCGCC 759 Query 869 TTAGCTCTCGATCGAAGCGGCCACCGGTTTCTTTGGTCTCTCCGTCGTGCATCTCCGAAT 928 ||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct 760 GTAGCTCTGGATCGAAGCGGCCACCGGTTTCTCTGGTCTCTCCGCCGTGCATCTCCGAAT 819 Query 929 ATATTGAGAGAGCCTCCCGGAGAATTCACAAACCTAGAGGAGATTCTCCCAGAAGGGTTT 988 ||| ||| ||||||||||||||||||||| |||||||| ||||||||||| ||||||||| Sbjct 820 ATAATGAAAGAGCCTCCCGGAGAATTCACTAACCTAGACGAGATTCTCCCGGAAGGGTTT 879 Query 989 -TTCGATCGGACGGCTAACAGAGGAAAGGTTATCGGATGGGCTGAACAGGTGGCCATATT 1047 || ||||||||| | || ||||| || |||||||||||| ||| |||||| | || Sbjct 880 CTT-GATCGGACGAAGGAGAGGGGAAACGTGATCGGATGGGCTCCACAAGTGGCCGTGTT 938 Query 1048 GGCGAAGCCGGCGATCGGAGGTTTTGTTTCTCACGGCGGATGGAATTCGACGTTGGAGAG 1107 |||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||| Sbjct 939 GGCGAAGCCGGCGATCGGGGGTTTTGTTTCTCACGGTGGATGGAATTCAACGTTGGAGAG 998 Query 1108 TTTGTGGTTTGGTGTTCCGATGGCGATTTGGCCGCTTTACGCTGAACAGAAGTTTAACGC 1167 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 999 TTTGTGGTTTGGTGTTCCGATGGCGATTTGGCCGCTTTACGCCGAACAGAAGTTTAACGC 1058 Query 1168 TTTCGAGATGGTGGAAGAGCTTGGTTTGGCTGTGGAGATCAAGAAGCATTGGCGAGGAGA 1227 ||| ||||||||||| |||||||| ||||| |||||||||||||| || ||||||||||| Sbjct 1059 TTTTGAGATGGTGGAGGAGCTTGGCTTGGCGGTGGAGATCAAGAATCACTGGCGAGGAGA 1118 Query 1228 TCTTTTGTTGGGGAGGTCGGAGAT-----T-GTGACGGCGGAGGAGATTGAGA 1274 |||||||||||||||||||||||| | ||||||||||||||||| |||| Sbjct 1119 TCTTTTGTTGGGGAGGTCGGAGATGGAGATTGTGACGGCGGAGGAGATAGAGA 1171 > Ahg930144 jgi|Araly1|930144|scaffold_302601.1 Length=1527 Score = 625 bits (338), Expect = 3e-178 Identities = 864/1113 (78%), Gaps = 56/1113 (5%) Strand=Plus/Plus Query 338 GACATGTACTGCACGTCGATGATCGATGTCGCTAACGAATTTGGCGTCCCTAGTTACTTG 397 ||||||| ||||| |||||| | ||| | || || || ||| | || || ||||||||| Sbjct 380 GACATGTTTTGCACATCGATGGTAGATCTGGCGAAAGAGTTTAGTGTTCCGAGTTACTTG 439 Query 398 TTTTACACCTCTAACG-CTGGATTTCT-TGGACTTTTGCT-TCACATTCAGTTCATGTAC 454 |||||||| || | || | ||| |||| | || || | | ||| ||||| | ||| | Sbjct 440 TTTTACACGTCGAGCGCCGGGA-TTCTCT-CAC-TTGGATATCATGTTCAGATGTTGTGC 496 Query 455 GATGCAG-AGGA-TATCTATGACA-TG--AGCGAATTA-GAAGACTCTGACG-TAGAGTT 507 |||| || | | || | ||| | || || | |||| | ||||| || | | | ||| Sbjct 497 GATG-AGAACAAGTA-CGATGTTAGTGAAAGTG-ATTATGCCGACTCAGAAGCT-GTGTT 552 Query 508 GGTGGTTCCGAGTTTGACTAGTCCTTATCCGTTGAAATGTCTTCCTTACATTTTCAAATC 567 || ||||||||||||||| ||||||||||| |||| ||||||||| || | || ||| Sbjct 553 GGACGTTCCGAGTTTGACTCGTCCTTATCCGGTGAAGTGTCTTCCTCACGCTCTCGCATC 612 Query 568 -AAAAGAGTGGCTCACtttttttGTAACTCAAGCGAG-AAGATTCAGAGAAACT-AAGGG 624 |||| ||||||| | | ||||||| |||||| || ||| || ||||| | | || || Sbjct 613 TAAAA-TGTGGCTCCCGATGTTTGTAAATCAAGCAAGAAAG-TTTAGAGAGA-TGAAAGG 669 Query 625 CATTTTGGTAAACACGGTTCCTGA-CTTGGAACCTCAAGCGTTGACGTTTCTTTCCAATG 683 ||||||||||| || ||| |||| ||| |||||||| | ||||| ||||||||| | | Sbjct 670 TATTTTGGTAAATACTGTTGCTGAGCTT-GAACCTCATGTGTTGAAGTTTCTTTCGAGTA 728 Query 684 GTAACATTCCACGTGCTTACCCAGTAGGACCATTGTTGCATCTCAAAAACGTAAATTG-T 742 || | | ||| | || ||| || || |||||||||||||||||| | ||| || ||| Sbjct 729 GTGATACTCCTCCTGTTTATCCTGTTGGACCATTGTTGCATCTCGAGAAC-CAAGTTGAG 787 Query 743 GATTACGTGGACAAGAAGCAATCGGAGATTTTACGGTGGCTAGACGAGCAACCGCCAAGA 802 |||| | ||| |||| | ||||||||||||||| ||| |||| |||||||| || || Sbjct 788 GATTCCAAGGATGAGAAACGATCGGAGATTTTACGATGGTTAGATGAGCAACCACCTAGT 847 Query 803 TCTGTAGTGTTCCTCTG-TTTCGGGAGCATGGGAGGGTTCAGTGAGGAACAAGTGAGAGA 861 || || ||||| || || ||| |||||||||||||| |||| | |||||||||| ||||| Sbjct 848 TCGGTTGTGTTTCTTTGCTTT-GGGAGCATGGGAGGCTTCAATAAGGAACAAGTAAGAGA 906 Query 862 AACCGCATTAGCTCTCGATCGAAGCGGCCACCGGTTTCTTTGGTCTCTCCGTCGTGCATC 921 || |||| |||| || || ||||| |||||||||||||| |||||||||||||||||||| Sbjct 907 AATCGCAATAGCCCTAGAGCGAAGTGGCCACCGGTTTCTCTGGTCTCTCCGTCGTGCATC 966 Query 922 TCCGAATATATTGAGAGAGCCTCCCGGAGAATTCACAAACCTAGAGG-AGATTCTCCCAG 980 ||| |||||||| | ||| ||||| |||| || || || ||||||| || ||||||| | Sbjct 967 TCCTAATATATTTAAAGAACCTCCAAGAGAGTTTACTAATCTAGAGGAAG-TTCTCCCGG 1025 Query 981 AAGGGTT-TTTCGATCGGACGGCTAACAGAGG-AAAGGTTATCGGATGGGCTGAACAGGT 1038 |||| || ||| || | ||| | | ||| ||| || || ||||||||| |||||| Sbjct 1026 AAGGATTCTTT-GAAAGAACGAAGGAGAAAGGTAAA-GTGATAGGATGGGCTCCACAGGT 1083 Query 1039 GGCCAT-ATTGGCGAAGCCGGCGATCGGAGGTTTTGTTTCTCACGGCGGATGGAATTCGA 1097 ||| | || ||||| ||||| || |||||||| || | ||| | ||||||||||||| Sbjct 1084 GGCGGTGCTT-GCGAATCCGGCTATAGGAGGTTTCGTCACACACTGTGGATGGAATTCGA 1142 Query 1098 CGTTGGAGAGTTTGTGGTTTGGTGTTCCGATGGC-GATTTGGCCGCTT-TACGCTGAACA 1155 || | |||||| | ||||| |||||||| | || | |||||| || ||||| ||||| Sbjct 1143 CGCTAGAGAGTCTCTGGTTCGGTGTTCCAACAGCTG-CATGGCCG-TTATACGCAGAACA 1200 Query 1156 GAAGTTTAACGCTTTCGAGATGGTGGAAGAGCTTGGTTTGGCTGTGGAGATCAA-GAAGC 1214 |||||| ||||||||| ||||||||| |||||||| ||||| |||||||| || |||| Sbjct 1201 GAAGTTCAACGCTTTCTTGATGGTGGAGGAGCTTGGATTGGCGGTGGAGAT-AAGGAAGT 1259 Query 1215 ATTGGCGAGGAGATCTTTTGTTG-GGGAGGT-CGGAGA-TT---GTGACGGCGGAGGAGA 1268 |||||||||| |||| || | | |||| || | || | || ||||||||||| |||| Sbjct 1260 ATTGGCGAGGTGATC-ATT-TAGCGGGA-GTGCCGACAGTTACGGTGACGGCGGATGAGA 1316 Query 1269 TTGAGAAAGGAATCATATGTTTGATGGAGCAAGACAGTGACGTCAGGAAGAGAGTGAATG 1328 | ||||||| |||||| ||| | ||||||||||| |||||||| || || |||||||| | Sbjct 1317 TAGAGAAAGCAATCATGTGTCTAATGGAGCAAGATAGTGACGTGAGAAAAAGAGTGAAGG 1376 Query 1329 AGATCAGCGAGAAGTGCCACGTGGCTTTAATGGACGGTGGATCGTCA-GAAACTGCTTTG 1387 |||| || ||||| |||||||||||||||||||||||||||||||| | | || ||| Sbjct 1377 AGATGAGTGAGAAATGCCACGTGGCTTTAATGGACGGTGGATCGTCGCGGAT-TGGGTTG 1435 Query 1388 -AAAAGATTTATTCAAGACGTAACGGAGAATAT 1419 ||||| |||||| ||||||| ||| ||||||| Sbjct 1436 CAAAAG-TTTATTGAAGACGTTACGAAGAATAT 1467 > Ahg493362 jgi|Araly1|493362|fgenesh2_kg.7__2795__AT4G15260.1 Length=1550 Score = 422 bits (228), Expect = 5e-117 Identities = 535/678 (79%), Gaps = 42/678 (6%) Strand=Plus/Plus Query 763 ATC-GGAGATTTTACGGTGGCTAGACGAGCAACCGCC-AAGATCTGTAGTGTTCCTCTG- 819 ||| ||||||||| |||||||| || ||||||||||| || |||||| ||||| || || Sbjct 717 ATCTGGAGATTTTGCGGTGGCTCGATGAGCAACCGCCGAA-ATCTGTTGTGTTTCTTTGC 775 Query 820 TTTCGGGAGCATGGGAGGGTTCAGTGAGGAAC-AAGTGAGAGAAACCGCAT-TAGC-TCT 876 ||| || ||||||||||| |||| |||||| | || | ||||| || | |||| | | Sbjct 776 TTT-GGAAGCATGGGAGGTTTCACTGAGGAGCAAACT-AGAGAGGTAGC-TGTAGCGT-T 831 Query 877 CGATCGAAGCGGCCACCGGTTTCTTTGGTCTCTCCGTCGTGCATCTCCGAATATATTGA- 935 |||||||| || |||||||||||||||||||||||||||||||| ||||||||| ||| Sbjct 832 AGATCGAAGTGGTCACCGGTTTCTTTGGTCTCTCCGTCGTGCATCGCCGAATATAATGAT 891 Query 936 GAGAGCCTCCCGGAGAAT-TCACAAACCTAGAGGAGATTCTCCCAGAAGGGTTTTTCGAT 994 | || | ||||||||| | | || || || |||||| || | || || ||||| || || Sbjct 892 G-GAACGTCCCGGAGATTAT-ACGAATCTTGAGGAGGTTTTACCGGAGGGGTTCTTGGAG 949 Query 995 CGGACGGCTAACAGAGG-AAAGGTTATCGGATGGGCTGAACAGGTGGCCATATTGGCGAA 1053 |||||| | | ||||| |||| | ||||||||||| ||| ||||| | | | ||| Sbjct 950 CGGACGTCGGATAGAGGGAAAG-TGATCGGATGGGCACCACAAGTGGCGGTGCTAGAGAA 1008 Query 1054 GCCGGCGATCGGAGGTTTTGTTTCTCACGGCGGATGGAATTCGACGTTGGAGAGTTTGTG 1113 |||||||| ||||| |||||| |||| | || ||||| |||| | | ||||| ||||| Sbjct 1009 ACCGGCGATAGGAGGGTTTGTTACTCATTGTGGTTGGAACTCGATGCTAGAGAGCTTGTG 1068 Query 1114 GTTTGGTGTTCCGATGGCGATTTGGCCGCTTTACGCTGAACAGAAGTTTAACGC-TTTCG 1172 ||||||||||||||||| || |||||||||||||| || |||||| ||||||| ||| | Sbjct 1069 GTTTGGTGTTCCGATGGTGACGTGGCCGCTTTACGCGGAGCAGAAGGTTAACGCGTTT-G 1127 Query 1173 AGATGGTGGAAGAGCTTGGT-TTGGCTGTGGAGATCAAG-AAG--CATTGGCGAGGAGAT 1228 |||||||||| ||| |||| ||||| |||||||| | | ||| |||| | ||||||| Sbjct 1128 AGATGGTGGAGGAG-TTGGGGTTGGCGGTGGAGAT-ACGTAAGTGCATTAG--AGGAGAT 1183 Query 1229 CTT-TTGTTGG--GGAGG--TCGGAGATTGTGACGGCGGAGGAGATTGAGAAAGGAATCA 1283 || |||||| |||| | ||||| || ||||||||||| || |||| || |||| Sbjct 1184 -TTGTTGTTGATCGGAGAAAT-GGAGACGGTTACGGCGGAGGATATAGAGAGAGCTATCA 1241 Query 1284 TATGTTTGATGGAGCAAGACAGTGACGTCAGGAAG-AGAGTGAATGAGATCAGCG-AGAA 1341 || |||||||||| || ||||| || |||| | |||||||| ||||| ||| |||| Sbjct 1242 GGCGTGTGATGGAGCAGGATAGTGATGTAAGGA-GTAGAGTGAAGGAGATG-GCGGAGAA 1299 Query 1342 GTGCCACGTGGCTTTAATGGACGGTGGATCGTCAGAA-ACTGCTTTG-AAAAGATTTATT 1399 ||| |||||||| ||||||||||||||||| || ||| || |||||| ||||| |||||| Sbjct 1300 GTGTCACGTGGCGTTAATGGACGGTGGATCTTC-GAAGACGGCTTTGGAAAAG-TTTATT 1357 Query 1400 CAAGACGTAACGGAGAAT 1417 ||||||| | |||||| Sbjct 1358 GAAGACGTGATAGAGAAT 1375 > Ahg946800 jgi|Araly1|946800|scaffold_703029.1 Length=1442 Score = 414 bits (224), Expect = 8e-115 Identities = 826/1105 (75%), Gaps = 87/1105 (8%) Strand=Plus/Plus Query 353 TCGATGATCGATGTCGCTAACGAATTTGGCG-TCCCTAGTTACT-TGTTTTACACCTCTA 410 |||||||| ||||| ||||||||||| || | ||| | |||| | || | ||||| || | Sbjct 369 TCGATGATTGATGTAGCTAACGAATTCGGAGTTCCGT-GTTA-TATGATCTACACATCGA 426 Query 411 ACGCT--GGATTTCTTGGACTTTTGCTTCACATTCAGTTCATGTACGATGCAGAGGATAT 468 ||||| || |||| ||| | |||||||| |||| ||||||||| || | || | Sbjct 427 ACGCTACGG--TTCTAGGAATCATGCTTCACCTTCAACAAATGTACGAT-CAAAAGA-A- 481 Query 469 CTATGACATGAGCGAATTAGAAGACTCTGACGTA-GAGTTGGTGGTTCCGAGTTTGACTA 527 |||||| | || || || ||||| || | | | ||||||| | ||||| | ||| | Sbjct 482 GTATGACGTCAGTGAGTTGGAAGAGTCAGTC-AACGAGTTGGAGTTTCCGTCTCTGAGTC 540 Query 528 GTCCTTATCC-GTTGAAATGTCTTCCTTACATTT--TCAAATCAAAAGAGTGGCTCACtt 584 |||||||||| | |||| |||||||| | ||||| ||| ||||| |||||| | |||| Sbjct 541 GTCCTTATCCAG-TGAAGTGTCTTCC-T-CATTTCCTCACTTCAAAGGAGTGG-TTACTT 596 Query 585 -tttttGTAACTCAAGCGAGAAG-ATTCA-GAGAA-ACT-AAGGGCATTTTGGTAAACAC 639 | ||| || | ||||| || | ||| | | ||| | | || || ||||||||||| || Sbjct 597 CTCTTTCTAGCACAAGCCAG--GTATTTACG-GAAGA-TGAAAGGTATTTTGGTAAATAC 652 Query 640 GGTTCCTGA-CTTGGAACCTCAAGCGTTGACGTTTCTTT-CCAATGGT-AACATTCCACG 696 ||| |||| ||| |||||| | || || | | ||| |||| | | | |||| | Sbjct 653 AGTTGCTGAGCTT-GAACCTTACGC-TTTAAAAATGTTTAATAATGTTGATC-TTCCTCA 709 Query 697 TGCTTACCCAGTAGGACCATTGTTGCATCTCAAAAACGTAAATTGTGATTACGTGGACAA 756 ||||| || ||||||||| |||||||| || ||| | | | | | || Sbjct 710 AGCTTATCCGGTAGGACCAGTGTTGCATTTC---GACG---A---CG---A--T-G--AA 752 Query 757 GAAGCAATCGGAGATTTTACGGTGGCTAGACGAGCAACCGCC-AAGATCTGTAGTGTTCC 815 |||||||| |||||||| | |||||| || ||||||||||| || |||||| ||||| | Sbjct 753 -AAGCAATCAGAGATTTTGCAGTGGCTCGATGAGCAACCGCCGAA-ATCTGTTGTGTTTC 810 Query 816 TCTGTTTCGGGAGCATGGGAGGGTTCA-GTGAGGAACAAG-TGAGAGAAACCG-CATTAG 872 ||||||| || ||||||||||| |||| | |||||||||| | ||||||| | |||| | Sbjct 811 TCTGTTTTGGAAGCATGGGAGGTTTCACG-GAGGAACAAGCT-AGAGAAATGGCCATT-G 867 Query 873 CTCTCGATCGAAGCGGCCACCGGTTTCTTTGGTCTCTCCGTCGTGCATCTCCGAATATAT 932 | || ||||| ||||| | ||||||||||||||||||||||||||||| ||||||||| Sbjct 868 CGCTTGATCGTAGCGGTTATCGGTTTCTTTGGTCTCTCCGTCGTGCATCGCCGAATATAA 927 Query 933 TGAGAGAGCC-TCCCGGAGAATTCACAAACCTAGAGGA-GATTCTCCCAGAAGGGTTTTT 990 ||| || || ||| |||| ||||| | | || || | ||||||| | ||||| | Sbjct 928 TGACCGA-CCGTCCTAGAGATTTCACGGATTTGGATGAAG-TTCTCCCGGTGGGGTTCCT 985 Query 991 CGATCGGACGGCTA-ACAGAGGAAAGGTTATCGGATGGGCTGAACAGGTGGCCA-TATTG 1048 |||||||| | | ||||| ||||| | |||||||| ||| ||||| | | | Sbjct 986 AGATCGGACAT-TGGATAGAGGGAAGGTGGTGGGATGGGCACCACAAGTGGC-AGTGCTA 1043 Query 1049 GCGAAGCCGGCGATCGGAGGTTTTGTTTCTCACGGCGGATGGAATTCGACG-TTGGAGAG 1107 || || |||||||| ||||| |||||| |||| | || ||||| |||| | ||| | || Sbjct 1044 GCAAAACCGGCGATAGGAGGATTTGTTACTCATTGTGGGTGGAACTCGATGCTTGAA-AG 1102 Query 1108 TTTGTGGTTTGGTGTTCCGATGGCGATTTGGCCGCTTTACGCTGAACAGAAGTTTAACGC 1167 |||||||| ||||||||||||| || |||||||| ||||| || |||||| | ||||| Sbjct 1103 CTTGTGGTTCGGTGTTCCGATGGTGACATGGCCGCTCTACGCCGAGCAGAAGATAAACGC 1162 Query 1168 -TTTCGAGATGGTGGAAGAGCTTGGTTTGGCTGTGGAGATCAAG-AAGCA-TTGGCGAGG 1224 ||| ||||||||||| ||||| || ||||| |||||||| | | ||| | || ||| Sbjct 1163 GTTT-GAGATGGTGGAGGAGCTGGGATTGGCGGTGGAGAT-ACGTAAGTACTTAAA-AGG 1219 Query 1225 AGATCTT-TT-GTTGGGGAGGTCGGAGATTGTGACGGCGGAGGAGATTGAGAAAGGAATC 1282 |||| || || | || ||| | ||||| || ||||| ||||| || |||| || ||| Sbjct 1220 AGAT-TTGTTCGCCGGAGAGAT-GGAGACGGTTACGGCCGAGGATATAGAGAGAGCTATC 1277 Query 1283 ATATGTTTGATGGAGCAAGACAGTGACGTCAGGAAGAGAGTGAATGAGATCAGC-GAGAA 1341 | || |||||||||| || ||||| || ||||| |||||||| || || || |||| Sbjct 1278 AGGCGTGTGATGGAGCAGGATAGTGATGTAAGGAATAGAGTGAAGGAAATG-GCTGAGAT 1336 Query 1342 GTGCCACGTGGCTTTAATGGACGGTGGATCGTCAGAA-ACTGCTTTG-AAAAGATTTATT 1399 ||| || ||||| ||||||||||||||||| || || ||||||||| ||||| |||||| Sbjct 1337 GTGTCATGTGGCGTTAATGGACGGTGGATCTTCC-AAGACTGCTTTGCAAAAG-TTTATT 1394 Query 1400 CAAGACGTAACGGAGAATATTGCTT 1424 |||||||| | |||||| |||||| Sbjct 1395 CAAGACGTGATAGAGAATGTTGCTT 1419 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 55802208925 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5