BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G22270.1 Length=3295 Score E Sequences producing significant alignments: (Bits) Value Ahg479740 jgi|Araly1|479740|fgenesh2_kg.3__2441__AT3G22270.1 5210 0.0 Ahg946844 jgi|Araly1|946844|scaffold_703073.1 1875 0.0 > Ahg479740 jgi|Araly1|479740|fgenesh2_kg.3__2441__AT3G22270.1 Length=3277 Score = 5210 bits (2821), Expect = 0.0 Identities = 3155/3310 (95%), Gaps = 48/3310 (1%) Strand=Plus/Plus Query 1 ATGTTACACACGGCCAAGGAAACAGAACAAGAACAAATAAAGGCCATTGctttcttcttc 60 |||||||||||||| |||||||||||||||||| |||||||||||||||| | ||||| Sbjct 1 ATGTTACACACGGCGAAGGAAACAGAACAAGAAAAAATAAAGGCCATTGC--T-TTCTT- 56 Query 61 ccttccccttctcttcattgcccttct--ctctctcttttttATCGCGGAGAGAGTTTTA 118 ||| ||||||||||||| ||||||| ||||||||||||| |||||||||||| ||| Sbjct 57 -CTT--CCTTCTCTTCATTACCCTTCTCGCTCTCTCTTTTTTGTCGCGGAGAGAG-TTT- 111 Query 119 TAGATTTCTCCTTCTTCAAC-TTTACTTGCGTTTCTTTG-TTTTATCAATTCGAAAACCC 176 |||| || ||||| |||||| ||||||||||||| |||| ||||||||||| |||||||| Sbjct 112 TAGA-TT-TCCTTGTTCAACTTTTACTTGCGTTT-TTTGTTTTTATCAATTGGAAAACCC 168 Query 177 TAGCAGCAATCTCTGCTGATTTCACTTACCCACCTCGAATTTTGTTGT-TCTATCTCCTT 235 |||||||||||||||||||||||||||||||||||| |||||| | | ||| ||||||| Sbjct 169 TAGCAGCAATCTCTGCTGATTTCACTTACCCACCTCAAATTTT-ATCTCTCTGTCTCCTT 227 Query 236 CACAAAGCACCACCTATCTGAAACCCTAGGGGAAGAGGATTCTCTCTTATGTCCTCTTCT 295 ||||||| ||||||||||||||||||||||| ||||||| | |||||||||||||||||| Sbjct 228 CACAAAGTACCACCTATCTGAAACCCTAGGGAAAGAGGA-T-TCTCTTATGTCCTCTTCT 285 Query 296 GTTATCTTCTCTTACCTCTAAAGTTTCGTTTATTTCGATCATGGAGAGATCTGATTCAAG 355 || |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 286 GTCATCTTCTCTTACCTCTAAAGTTTCGTTT-TTTCGATCATGGAGAGATCTGATTCAAG 344 Query 356 GGATTTGTATAACTTTGTTCGCGCTTCTTCCTTAGATAAAAACAGTACACTCTTTGATGC 415 |||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||| Sbjct 345 GGATTTGTATAACTTTGTGCGTGCTTCTTCCTTAGATAAAAACAGTACACTCTTCGATGC 404 Query 416 ATCACAATATGAGTTTTTTGGACAAAATCTGGATGATATGGAACTTGGGGGTCTTGATGA 475 ||||||||||||||||||||| || |||||||||||||||||| |||| |||||||| || Sbjct 405 ATCACAATATGAGTTTTTTGGTCAGAATCTGGATGATATGGAAATTGGAGGTCTTGACGA 464 Query 476 TGATGGAGTAATCGCTCCTGTTCTTGGACATGCTGATGATGATGAGTATCACTTGTTTGA 535 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 465 TGATGGAGTGATCGCTCCTGTTCTTGGACATGCTGATGATGATGAGTATCACTTGTTTGA 524 Query 536 TAAAGGAGAGGGTGCAGGTTTAGGATCACTATCTGACATGGATGATCTTGCGACAACTTT 595 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 525 TAAAGGAGAGGGAGCAGGTTTAGGATCACTATCTGACATGGATGATCTTGCGACAACTTT 584 Query 596 CGCAAAGTTAAACAGAGTTGTTACCGGACCCAAACACCCTGGAGTTATTGGTGATAGAGG 655 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 585 CGCAAAGTTAAACAGAGTTGTTACCGGACCCAAACACCCTGGAGTTATTGGTGACAGAGG 644 Query 656 ATCAGGATCCTTTTCAAGAGAGAGTTCTTCTGCTACCGATTGGACACAAGATGCAGAGCT 715 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 645 ATCAGGATCCTTTTCAAGAGAGAGTTCTTCTGCTACCGATTGGACACATGATGCAGAGCT 704 Query 716 CACAAGCTGGTTGGACGAACAAGATCAAGAAGCTAAGAGATGGTCCTCACAGCCACAATC 775 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 705 CACAAGCTGGTTGGACGAACAAGATCAAGAAGCTAAGAGGTGGTCCTCACAGCCACAATC 764 Query 776 ATTTGCTCATTCAAAACCTTTGTACAGGACATCCTCTTATCCTCAGCAGCAACCGCAGCT 835 ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 765 ATTTGTTCATTCAAAACCTTTGTACAGGACATCCTCCTATCCTCAGCAGCAACCGCAGCT 824 Query 836 GCAGCACTACAATAGTGAACCGATAATTTTACCAGAATCAAATTTTACCTCATTTCCCCC 895 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 825 GCAGCACTACAATAGTGAACCGATAATTTTACCAGAATCAAATTTTACCTCATTTCCCCC 884 Query 896 GCCTGGTAACAGATCTCCGCAGGCTTCACCCGGAAATCTCCATCGCGCTCCTTCTCTTCC 955 | |||||| ||||||||| ||||| |||||||||||||||||||| |||||||||||||| Sbjct 885 GTCTGGTAGCAGATCTCCACAGGCGTCACCCGGAAATCTCCATCGTGCTCCTTCTCTTCC 944 Query 956 TGGTGGTTCTCAGTTGACCTATTCTGCACCTTCCCCGCTGTCAAATTCTGGTTTTCATCT 1015 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 945 TGGTGGTTCTCAGTTGACCTATTCTGCACCTTCCCCACTGTCAAATTCTGGTTTTCATCT 1004 Query 1016 TTCAGGATTGTCGCAAGGGCCCCACTATGGTGGTAATTTGACTAGATATGCCTCGTGCGG 1075 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct 1005 TTCAGGATTGTCGCAAGGGCCCCACTATGGTAGTAATTTGGCTAGATATGCCTCGTGCGG 1064 Query 1076 TCCTACGCTTGGTAACATGGTGCAACCTCATTGGGTCACTGATCCTGGTCATCTACACGG 1135 |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 1065 TCCTACGCTTGGTAACATGGTGCAACCTCATTGGGTTACTGATCCTGGTCTTCTACACGG 1124 Query 1136 AGATCATTCTGGTTTATTACATAATCTGGTGCAACAACAGCATCAACAATTGCCTCCTCG 1195 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1125 AGATCATTCTGGTTTATTACATAATCTGGTGCAACAACAGCAGCAACAATTGCCTCCTCG 1184 Query 1196 AAATGCTATTATGTCGCAACATTTGCTTGCCCTCCAGCAGAGACAATCATATGCTCAACT 1255 |||||| |||||||||||||||||||| |||||||||||||||||||| |||||||| || Sbjct 1185 AAATGCCATTATGTCGCAACATTTGCTCGCCCTCCAGCAGAGACAATCGTATGCTCAGCT 1244 Query 1256 TGCAGCGCTACAGTCTCAACTGTATAGTTCCTATCCTTCGCCATCACGTAAAGTCCCTTT 1315 ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1245 TGCGGCGCTACAGTCCCAACTGTATAGTTCCTATCCTTCGCCATCACGTAAAGTCCCTTT 1304 Query 1316 TGGAGTTGGTGAAGTTAGGGAACACAAACATAAGTCATCTCATAGAAGTCGAAAGAATAG 1375 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1305 TGGAGTTGGTGAAGTTAGGGAACACAAACATAAGTCATCTCATAGAAGTCGAAAGAACAG 1364 Query 1376 AGGACTCTCTCAACAGACATCAGACGCAGCTAGTCAGAAAAGTGAAACTGGACTGCAGTT 1435 ||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||||| Sbjct 1365 AGGCCTCTCTCAACAGGCATCAGACGCAGCTAGTCAGAAAAGTGAAAGTGGACTGCAGTT 1424 Query 1436 TAGATCAAAGCACATGACTTCAGAAGAAATAGAGAGTATACTCAAGATGCAGCATTCCAA 1495 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1425 TAGATCAAAGCACATGACTTCAGAAGAAATAGAGGGTATACTCAAGATGCAGCATTCCAA 1484 Query 1496 TTCACACAGCAATGATCCCTATGTCAATGATTATTACCACCAAGCGAAGCTTGCCAAGAA 1555 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1485 TTCACACAGCAATGATCCCTATGTCAATGATTATTACCACCAAGCTAAGCTTGCCAAGAA 1544 Query 1556 GTCTGCCGGATCTAAAGCAATCTCTCACTTCTATCCTGCTCAGTTGAAGGACCACCAGCC 1615 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1545 GTCTGCCGGATCTAAAGCAATCTCTCACTTCTATCCTGCTCAGTTGAAGGACCACCAGCC 1604 Query 1616 TCGGTCCCGTAATAGTTCTGAACAGCATCCACAAGTTCATGTAGATGCTCTTGGTAAAAT 1675 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1605 TCGGTCCCGTAATAGTTCTGAACAGCATCCACAAGTTCATGTAGATGCTCTTGGTAAGAT 1664 Query 1676 TACACTTCCATCTGTCCGCAGGCCACATGCCTTGCTTGAGGTTGACTCTTCTCCTGGTTT 1735 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1665 TACACTTCCTTCTGTCCGCAGGCCACATGCCTTGCTTGAGGTTGACTCTTCTCCTGGTTT 1724 Query 1736 TAACGATGGAAGCGGGGATCATAAGGGCTCAGGAAAACATTTGGAACAGGAACCTCTCGT 1795 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1725 AAACGATGGAAGCGGGGATCATAAAGGCTCAGGAAAACATTTGGAACAGGAACCTCTCGT 1784 Query 1796 TGCAGCTAGGGTTACAATTGAAGATGCTCTTGGAGTTCTTATTGACATAGTTGACATTGA 1855 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1785 TGCAGCTAGGGTTACAATTGAAGATGCTCTTGGAGTTCTTATTGACATAGTTGACATTGA 1844 Query 1856 CAGGACTCTCCAAAACACAAGACCCCAGGACGGAGGTGCCCAACTCAAGAGAAAGCGGCA 1915 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1845 CAGGACTCTCCAAAATACAAGACCCCAGGACGGAGGTGCCCAACTCAAGAGAAAGCGGCA 1904 Query 1916 GATCCTGCTAGAAGGATTAGCGACAGCACTTCAACTTGCTGATCCGTTCAGCAAAACCGG 1975 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1905 AATCCTGCTAGAAGGATTAGCGACAGCACTTCAACTTGCTGATCCGTTCAGCAAAACCGG 1964 Query 1976 TCAGAAATCTGGGATGACTGCTAAGGATGATATTGTCTTTCTACGTATAGCGACTCTCCC 2035 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1965 TCAGAAATCCGGGATGACTGCTAAGGATGATATTGTCTTTCTACGTATAGCGACTCTCCC 2024 Query 2036 CAAGGGTCGGAAATTGCTTACAAAGTATCTACAACTTCTAGTTCCAGGTACTGAGAATGC 2095 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 2025 CAAGGGTCGGAAATTGCTTACAAAGTATCTACAACTTCTAGTTCCAGGTACTGAGATTGC 2084 Query 2096 TCGAGTTGTCTGTATGGCTATATTCCGCCACTTGAGATTTCTGTTCGGCGGCCTACCTTC 2155 ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct 2085 TCGAGTTGTCTGTATGGCTATATTCCGCCACTTGAGATTTCTGTTTGGCGGCCTGCCTTC 2144 Query 2156 AGATACTCTAGCAGCAGAGACAATATCTAATCTTGCCAAAGCAGTCACGGTTTGCGTTCA 2215 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 2145 AGATACTCTAGCAGCAGAGACGATATCTAATCTTGCCAAAGCAGTCACGGTTTGCGTTCA 2204 Query 2216 GGCCATGGACCTTCGAGCACTGAGTGCTTGCCTTGCAGCTGTAGTATGTTCTTCAGAGCA 2275 |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| Sbjct 2205 AGCCATGGACCTTCGAGCACTGAGTGCTTGCCTCGCAGCTGTAGTTTGTTCTTCAGAGCA 2264 Query 2276 GCCACCTCTCCGTCCTATCGGAAGTTCTGCTGGAGATGGTGCTTCAGTTGTCTTGATATC 2335 ||||||||| |||||||| |||||||||||||| ||||||||||||||||| |||||||| Sbjct 2265 GCCACCTCTGCGTCCTATTGGAAGTTCTGCTGGGGATGGTGCTTCAGTTGTGTTGATATC 2324 Query 2336 TCTTCTTGAGAGAGCTGCGGAAGTAGTGGTGGTTCCTCGAGTCATGCATGGGAATTCTAA 2395 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct 2325 TCTTCTTGAGAGAGCTGCTGAAGTAGTGGTGGTTCCACGAGTCATGCATGGGAATTCTAA 2384 Query 2396 TGATGGTCTCTGGAGAGCGTCATTTGATGAATTCTTCAACCTTCTTACCAAATACTGCAG 2455 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 2385 TGATGGTCTCTGGAGAGCCTCATTTGATGAATTCTTCAACCTTCTTACCAAATACTGCAG 2444 Query 2456 AAGCAAGTATGACACAATCCGTGGACAGAACCAAGGGAGTGCAGCGGATGTTTTGGAGCT 2515 |||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||| Sbjct 2445 AAGCAAGTATGAGACAATCCGCGGTCAGAACCAAGGGAGTGCAGCGGATGTTTTGGAGCT 2504 Query 2516 GGCGATAAAGAGGGAAATGCCCGCTGAGCTTTTACGTGCGAGTCTGCGTCACACCAATGA 2575 |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct 2505 GGCGATAAAGAGGGAAATGCCCGCTGAGCTTTTACGGGTGAGTCTGCGTCACACCAATGA 2564 Query 2576 CGACCAGAGGAACTATTTATTAAACTTTGGTCGTAAACCATCAGCAATTAGTGAGTCGGC 2635 ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| Sbjct 2565 CGACCAGAGGAACTATTTATTAAACTTTGGTCGTAAACCGTCGGCAATTAGTGAGTCGGC 2624 Query 2636 ATCTCATGCAAGGGGTGGACAGATCAACTCTGAATCTGTGAGGGGTTAATAAA-AAAGAA 2694 ||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||| || Sbjct 2625 GTCTCATGCAAGGGGTGGACAGATCAACTCCGAATCTGTGAGAGGTTAATAAAGAAA-AA 2683 Query 2695 AGAGAAACCATGTGCTTGGAAGATTCCAATTCTTGGTTTTCATGG-CTGTGGTGTGGACT 2753 |||||||||||| ||||||||||||||| |||||||||||| ||| |||||||||||||| Sbjct 2684 AGAGAAACCATGGGCTTGGAAGATTCCAGTTCTTGGTTTTC-TGGGCTGTGGTGTGGACT 2742 Query 2754 CAGGAGACAAACTTGTAAGTAACCTGGTGGTGTAGGAATCTTTTCACAAGGGTTTCAGGT 2813 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2743 CAGGAGACAAACTTGTAAGTAACCTGGTGGTGTAGGAATCTTTTCACAAGGGTTTCAGGT 2802 Query 2814 GAAAAGTGCTTTTAGATTCTGCTCTTCGTCTTCGT-TTTT-T-AACTTTGAACTCTTTTA 2870 |||||||||||||||||||||||| || ||||| | |||| | ||||||||||||||||| Sbjct 2803 GAAAAGTGCTTTTAGATTCTGCTCGTCTTCTTCTTCTTTTCTTAACTTTGAACTCTTTTA 2862 Query 2871 TATTTCGTATTATC-TTTTATGGTGGACAAATGCATATTCTGCTTGGTTTGTGTATTGGA 2929 ||||||||||| || |||||||||||||||||||| ||||||||||||||||||||| || Sbjct 2863 TATTTCGTATT-TCCTTTTATGGTGGACAAATGCAAATTCTGCTTGGTTTGTGTATTTGA 2921 Query 2930 TGATGGGAAAGAATGTGAAACATGGAGTAGTAGGGTTATCTGAAGAAGTAATGTCTTCCG 2989 |||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||| Sbjct 2922 TGATGGGAAAGAATGTGAAACATGGAGTAGTAGG-TTATCGGAAGAAGCAATGTCTTCCG 2980 Query 2990 ATGGGAGCCATATTTTGGTGCTCTAAATCGTTAGGGAAACAAAAA-TAGGAGGGAACTTT 3048 | | |||||||||||||||||||||| |||||||||||||||||| |||||||||| ||| Sbjct 2981 A-GAGAGCCATATTTTGGTGCTCTAA-TCGTTAGGGAAACAAAAAATAGGAGGGAATTTT 3038 Query 3049 AGTAGTTTGGGAAGGATACTAGTGTTTTGTGTACAGAATGATGATAAAACCCTTTATCCG 3108 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 3039 AGTGGTTTGGGAAGGATACTAGTGTTTTGTGTACAGAATGCTGATAAAACCCTTTATCCG 3098 Query 3109 GAGAATAGTGAGAAGACTATATAGGTGTTAATCCTCTTCGATTAACAGGTTTAG-G-TCC 3166 ||||||||||||||| | ||| |||| ||||| |||||||||||||||||||| | || Sbjct 3099 GAGAATAGTGAGAAGGCGATA--GGTGCTAATCATCTTCGATTAACAGGTTTAGAGGTCT 3156 Query 3167 GGAAAGCAGCTGGGAATCTGGGATAGGGAGTTCAAAAGTTTGTTATCTGATATGTTTATT 3226 ||||| ||| | ||||||||||||||| ||||||||||||||||||||||||||| Sbjct 3157 GGAAA--AGCAG-----CTGGGATAGGGAGTTAAAAAGTTTGTTATCTGATATGTTTATT 3209 Query 3227 TCCTCTTTGAACTGTTTCGTGTAATAGT-AGTAGGAACTCACAAAAACCCTCTTTTGAAT 3285 |||||| ||||| |||||||||||||| | ||||||||||||||| ||||||||| ||| Sbjct 3210 TCCTCTGAGAACTCTTTCGTGTAATAGTTA-TAGGAACTCACAAAA-CCCTCTTTTAAAT 3267 Query 3286 ACTCTTGGAT 3295 ||||||||| Sbjct 3268 TCTCTTGGAT 3277 > Ahg946844 jgi|Araly1|946844|scaffold_703073.1 Length=2412 Score = 1875 bits (1015), Expect = 0.0 Identities = 1982/2431 (82%), Gaps = 138/2431 (6%) Strand=Plus/Plus Query 332 GATCATGGAGAGATCTGATTCAAGGGATTTGTATAACTTTGTTCGCG-CTTCTTCCTTAG 390 ||||||||||||||||||||| || ||||| |||| ||||| ||| | |||||| | || Sbjct 22 GATCATGGAGAGATCTGATTCTAGAGATTTCTATACCTTTGCTCG-GACTTCTT-C--AG 77 Query 391 ATAAAAACAGTACACTCTTTGATGCATCACAATATGAGTTTTTTGGACAAAATCTGGATG 450 |||| || ||| |||||||||| ||||| ||||||||||| ||||| |||| ||| || | Sbjct 78 ATAAGAATAGTGCACTCTTTGACGCATCTCAATATGAGTTCTTTGGTCAAAGTCTTGAAG 137 Query 451 ATA-TGGAACTTGGG-GGTCTTGATGATGATGGAGTAATCGCTCCTGTTCTTGGACATGC 508 | | ||||| ||||| ||||||||||||||| | | | |||||| |||||||| Sbjct 138 A-AGTGGAA-TTGGGTGGTCTTGATGATGAT---G---T---TACTGTTCGTGGACATG- 185 Query 509 T-GATGATGATGAGTATCACTTGTTTGATAAAGGAGAGGGTGCAGGTTTAGGATCACTAT 567 | |||||||| |||||||| |||||||||||| |||||||||| |||||||||||||||| Sbjct 186 TCGATGATGAAGAGTATCATTTGTTTGATAAAAGAGAGGGTGCTGGTTTAGGATCACTAT 245 Query 568 CTGACATGGATGATCTTGCGACAACTTTCGCAAAGTTAAACAGAGTTGTTACCGGACCCA 627 |||| |||||||||||||| |||||||| |||||| | |||||| |||||| || |||| Sbjct 246 CTGAGATGGATGATCTTGCCACAACTTTTGCAAAGCTGAACAGAAATGTTACTGGGCCCA 305 Query 628 AACACCCTGGAGTTATTGGTGATAGAGGATCAGGATCCTTTTCAAGAGAGAGTTCTTCTG 687 |||||| |||||| |||||||| ||||||||||| |||||||||||||| |||||| ||| Sbjct 306 AACACCTTGGAGTAATTGGTGACAGAGGATCAGGGTCCTTTTCAAGAGAAAGTTCTACTG 365 Query 688 CTACCGATTGGACACAAGATGCA-GAGCTCACAAGCTGGTTGG-AC-G-A-A--C---AA 737 |||| ||||||||||||||| | ||| ||||||||||||||| || | | | | || Sbjct 366 CTACTGATTGGACACAAGAT-AATGAGTTCACAAGCTGGTTGGAACAGCACACGCTTGAA 424 Query 738 GATCAAG--AAGCTAAG--AGATGGTCCTCACAGCCACAATCATTTGCTCATTCAAAACC 793 || |||| || ||| || ||||| ||||||||||| || | |||| |||| | | Sbjct 425 GAACAAGTTCAG-GAAGCTAGTTGGTCTTCACAGCCACAGTCGTCTGCTAATTC---ATC 480 Query 794 TTTGTACAGGACATCCTCTTATCCTCAGCAGCAACCGCAGCTGCAGCACTACAATAGTGA 853 ||| ||||||||||| || ||||||||||||||| | ||||| || || |||| |||||| Sbjct 481 TTTATACAGGACATCTTCATATCCTCAGCAGCAAACACAGCTACAACATTACAGTAGTGA 540 Query 854 ACCGATAATTTTACCAGAATCAAATTTTACCTCATTTCCCCCGCCTGGTAACAGATCTCC 913 |||||| ||| |||||||||| | |||||| || ||||| ||||||| || ||||||| Sbjct 541 ACCGATTATTGTACCAGAATCGACTTTTACGTCTTTTCCTTCGCCTGGAAAAAGATCTCA 600 Query 914 GCAGGCTTCACCCG-GAAATCTCCATCGCGCTCCTTCTCTTCCTGGTGGTTCTCAGTTGA 972 ||| ||||| ||| | || | ||||| ||||||||||||||||||||| ||||| | Sbjct 601 ACAGTCTTCA-CCGAGCCATATTCATCGTGCTCCTTCTCTTCCTGGTGGTAGTCAGTCAA 659 Query 973 CCTATTCTGCACC---T---TCCCCGCTGTCAAATTCTGGTTTTCATCTTTCAGGATTGT 1026 || ||| ||||| | || ||| |||| |||||| ||| ||||| |||||||||| Sbjct 660 ACTTTTCAGCACCAAATGCCTCTCCGTTGTCGAATTCTACTTTCCATCTCTCAGGATTGT 719 Query 1027 CGCAAGG-GC-CC-CACTATGGTGGTAATTTGACTAGATATGCCTCGTGCGGTCCTACGC 1083 | || || | || || |||||| ||||||| ||||||||||||| || |||||||| | Sbjct 720 CACATGGACCACCGCATTATGGTAATAATTTGGCTAGATATGCCTCATGTGGTCCTACTC 779 Query 1084 TTGGTAACATGGT---GCAA---CCTCATTGGGTCACTGATCCTGGTCATCTACACGGAG 1137 ||||||||||||| |||| ||||||||||| || || || |||| ||| ||||| | Sbjct 780 TTGGTAACATGGTGCAGCAACCTCCTCATTGGGTTACCGACCCCGGTCTTCTGCACGGTG 839 Query 1138 ATCATTCTGGTTTATTACATAATCTGGTGCAACAACAGCA--T-CAACAATTGCCTCCTC 1194 ||||||| || || ||||| | ||| ||||||| ||||| | |||||||| ||||||| Sbjct 840 ATCATTCCGGGTTGTTACACAGTCTAATGCAACAGCAGCATCTGCAACAATTACCTCCTC 899 Query 1195 GAAATGCTATTA-TGTCGCAACATTTGCTTGCCCTCCAGCAGAGACAATCATAT-GCTCA 1252 | |||| | ||| | || ||||| ||| || |||| |||||||||||||| | | ||||| Sbjct 900 GGAATGGTTTTACT-TCACAACAGTTGATTTCCCTTCAGCAGAGACAATC-TTTAGCTCA 957 Query 1253 ACTTGCAGCGCTACAGTCTCAACTGTATAGTTCCTATCCTTCGCCATCACGTAAAGTCCC 1312 ||||| || | || |||| ||||||||||| |||||||| ||||||| ||||| || Sbjct 958 TCTTGCTGCATTGCAAACTCAGCTGTATAGTTCTTATCCTTCTCCATCACAAAAAGTTCC 1017 Query 1313 TTTTGGAGTTGGTGAAGTTAGGGAACACAAACATAAGTCATCTCATAGAAGTCGAAAGAA 1372 |||||| | ||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct 1018 TTTTGGGGCTGGTGAAGTAAGAGAACACAAACATAAGTCATCTCATAGAAGTCGAAAGAA 1077 Query 1373 TAGAGG-ACTCTCTCAACAGACATCAGACGCAGCTAGTCAGAAAAGTGAAA-CTGGACTG 1430 ||||| | ||||||||||||| ||||| ||||| |||||||| |||| | |||||| Sbjct 1078 CAGAGGTA-TCTCTCAACAGACCTCAGATTTGGCTAGCCAGAAAAGCGAAAGC-GGACTG 1135 Query 1431 CAGTTTAGATCAAAGCACATGACTTCAGAAGAAATAGAGAGTATACTCAAGATGCAGCAT 1490 || |||| ||||||| |||||||||||||||| ||||||||||| ||||||||||||||| Sbjct 1136 CAATTTAAATCAAAGTACATGACTTCAGAAGAGATAGAGAGTATTCTCAAGATGCAGCAT 1195 Query 1491 TCCAATTCACACAGCAATGATCCCT-ATGTCAATGATTATTACCACCAAGCGAAGCTTGC 1549 |||| ||||||||| | ||| |||| ||||||||||||||||||||||||| |||||| Sbjct 1196 TCCAGTTCACACAGTAGTGA-CCCTTATGTCAATGATTATTACCACCAAGCTCGGCTTGC 1254 Query 1550 CAAGAAGTC-TGCCGGATCTAA-AGC-AATCTCTCACTTCTATCCTGCTCAGTTGAAGGA 1606 || ||||| | ||||||| || || || | |||| || |||||| |||| |||||||| Sbjct 1255 GAAAAAGTCAT-CCGGATC-AAGAGTGAAGC-CTCAGTTGTATCCTTCTCATTTGAAGGA 1311 Query 1607 CCACCAGCCTCGGTCCCGTAATAGTTCTGAACAGCATCCACAAGTTCATGTAGATGCTCT 1666 |||||| |||||||||||||||||||||| || || |||||||||||||| |||||||| Sbjct 1312 CCACCAATCTCGGTCCCGTAATAGTTCTGATCAACAACCACAAGTTCATGTGGATGCTCT 1371 Query 1667 TGGTAAA-ATTACACTTCCATCTGTCCGCAGGCCAC-ATGC-CTTGCTTGAGGTTGACTC 1723 ||| ||| ||||| ||||| ||| | |||| |||| | || || || ||||||||||| Sbjct 1372 TGG-AAAGATTACGCTTCCTTCTATTTGCAGACCACGA-GCGCTA-CTCGAGGTTGACTC 1428 Query 1724 TTCTCCTGGTTTTAACGATGGAAGCGGGGATCATAAGGGCTCAGGAAAACAT-TTGGAAC 1782 | ||||| | | | |||||||| | || | || ||| || ||| ||| || Sbjct 1429 TCCTCCTAGCTCTGGTGATGGAAG-G----TC-T--GG--TCAT-AAG-CATCTTG-AAG 1475 Query 1783 AGGAACCTCTCGTTGCAGCTAGGGTTACAATTGAAGATGCTCTTGGAGTTCTTATTGACA 1842 | || ||||| || |||||||| || ||||||||||||||| ||||||||||||| || | Sbjct 1476 ATGAGCCTCTTGTCGCAGCTAGAGTCACAATTGAAGATGCTTTTGGAGTTCTTATCGATA 1535 Query 1843 TAGTTGACATTGACAGGACTCTCCAAAACA-CAAGACCCCAGGACGGAGGTGCCCAACTC 1901 |||||||||||||||||||||||||| || || | || || ||||| ||||| || ||| Sbjct 1536 TAGTTGACATTGACAGGACTCTCCAATTCAACAGG-CCACAAGACGGTGGTGCACAGCTC 1594 Query 1902 AAGAGAAAGCGGCAGATCCTGCTAGAAGGATTAGCGACAGCACTTCAACTTGCTGATCCG 1961 | |||||| |||||||| || |||||||||||||| ||| |||||||||||| |||||| Sbjct 1595 AGGAGAAAACGGCAGATACTTCTAGAAGGATTAGCAACATCACTTCAACTTGTTGATCCT 1654 Query 1962 TTCAGCAAAACCGGTCAGAAATCTGGGAT-GACTGCTAAGGATGATATTGTCTTTCTACG 2020 || ||||||||||| |||||| | | || ||| || ||||||||||| || |||||||| Sbjct 1655 TTTAGCAAAACCGGCCAGAAAACCGC-ATTGACCGCCAAGGATGATATCGTGTTTCTACG 1713 Query 2021 TATAGCGACTCTCCCCAAGGGTCGGAAATTGCTTACAAAGTATCTACAACTTCTAGTTCC 2080 ||||| ||||| || |||||| | |||||||| |||||||||||||| ||||| ||||| Sbjct 1714 CATAGCTACTCTTCCTAAGGGTAGAAAATTGCTGACAAAGTATCTACAGCTTCTTGTTCC 1773 Query 2081 AGGTACTGAGAAT-GCTCGAGTTGTCTGTATGGCTATATTCCGCCACTTGAGATTTCTGT 2139 |||||||||| | ||||| ||||||||||||||| ||||||||||| | || ||||| | Sbjct 1774 GGGTACTGAGA-TCGCTCGGGTTGTCTGTATGGCTGTATTCCGCCACCTCAGGTTTCTAT 1832 Query 2140 TCGGCGGCCTACCTTCAGATA-C-TCTAGCAGCAGAGACAATATCTAATCTTGCCAAAGC 2197 |||| |||||||| ||||||| | | | ||||||||||||||| |||||||||| ||||| Sbjct 1833 TCGGTGGCCTACCGTCAGATAGCAT-T-GCAGCAGAGACAATAGCTAATCTTGCTAAAGC 1890 Query 2198 AGTCACGGTTTGCGTTCAGGCCATGGACCTTCGAGCACTGAGTGCTTGCCTTGCAGCTGT 2257 ||| |||||||| ||||| || |||||||| |||||| |||||||||| ||||||||||| Sbjct 1891 AGTTACGGTTTGTGTTCACGCAATGGACCTCCGAGCATTGAGTGCTTGTCTTGCAGCTGT 1950 Query 2258 AGTATGTTCTTCAGAGCAGCCACCTCTCCGTCCTATCGGAAGTTCTGCTGGAGATGGTGC 2317 || ||||||||||| ||||||||||||||||| || |||||| || | || ||||| || Sbjct 1951 TGTTTGTTCTTCAGAACAGCCACCTCTCCGTCCAATAGGAAGTCCTTCCGGGGATGGAGC 2010 Query 2318 TTCAGTTGTCTTGATATCTCTTCTTGAGAGAGCTGC-G--G-A--AGTAGTGGTGGT--T 2369 ||||||||||||| |||||||||||||||||||||| | | | |||||||||||| | Sbjct 2011 TTCAGTTGTCTTGGTATCTCTTCTTGAGAGAGCTGCTGAAGTAGTAGTAGTGGTGGTGGT 2070 Query 2370 -CCTC-GAGTCATGCATGGGAATTCTAATGATGGTCTCTGGAGAGCGTCATTTGATGAAT 2427 || | | || | || | || || |||||||| ||||||||||| || |||||||||| Sbjct 2071 TCCACCGCGTG-T-CA-GC-AACTCGAATGATGGACTCTGGAGAGCATCGTTTGATGAAT 2126 Query 2428 TCTTCAAC-CTTCTTACCAAATACTGCAGAAGCAAGTATGACACAATCCGTGGACAGAAC 2486 ||||| | |||||||| ||||| ||||| ||||||||||| ||||||| ||| |||||| Sbjct 2127 TCTTCT-CTCTTCTTACTAAATATTGCAGGAGCAAGTATGAGACAATCCATGGTCAGAAC 2185 Query 2487 CAAGGG-AGTGCAGCGGATGTTTTGGAGCTGGCGATAAAGAGGGAAATGCCCGCTGAGCT 2545 || || | |||||| ||||| |||||||| || |||||||| |||||||| || ||||| Sbjct 2186 CA-GGATAATGCAGCTGATGTGTTGGAGCTAGCTATAAAGAGAGAAATGCCTGCCGAGCT 2244 Query 2546 TTTACGTGCGAGTCTGCGTCACACCAATGACGACCAGAGGAACTAT-TTA-TTAAACTTT 2603 ||||||||||||||| ||||| |||||||| ||||| |||| | | ||| |||| | || Sbjct 2245 TTTACGTGCGAGTCTTCGTCATACCAATGAAAACCAGCGGAATT-TCTTACTTAA-CGTT 2302 Query 2604 GGTCGTAAACCATCAGCAA-TTAGTGAGTCGGCATCT-CA--------TGCAAGGGGTGG 2653 ||||||| |||| || | |||| || || || || || |||||| ||||| Sbjct 2303 GGTCGTAGTGCATC-GCCAGTTAGCGAATCAACAACTACAACGACGCGTGCAAGTGGTGG 2361 Query 2654 ACAGATCAACTCTGAATCTGTGAGGGGTTAA 2684 ||| |||| ||||||| ||||||||||||| Sbjct 2362 TCAGGTCAATTCTGAATTTGTGAGGGGTTAA 2392 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 124372148564 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5