BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G22440.1
Length=2013
Score E
Sequences producing significant alignments: (Bits) Value
Ahg479762 jgi|Araly1|479762|fgenesh2_kg.3__2463__AT3G22440.1 3114 0.0
Ahg946855 jgi|Araly1|946855|scaffold_703084.1 1356 0.0
> Ahg479762 jgi|Araly1|479762|fgenesh2_kg.3__2463__AT3G22440.1
Length=1983
Score = 3114 bits (1686), Expect = 0.0
Identities = 1908/2010 (95%), Gaps = 36/2010 (2%)
Strand=Plus/Plus
Query 1 TTTCTAGGGTTTCTTCAATTTCACTCTCTCTCTTGAGTTTATTCTTCTCTGCTGTATCAA 60
|||||||||||||||||||||||||||||||||||||||| ||| | ||| |||||||||
Sbjct 1 TTTCTAGGGTTTCTTCAATTTCACTCTCTCTCTTGAGTTTGTTC-T-TCT-CTGTATCAA 57
Query 61 TCAAATCAACGGAGTTTGAGTTTCTTTTCCGATTCCGGCGATGGGGTCAGTCCCCGATCC 120
||||||| |||||||||||| || |||| ||||||||||||||||||||||||||||||
Sbjct 58 TCAAATCGACGGAGTTTGAGCTT-TTTT-AGATTCCGGCGATGGGGTCAGTCCCCGATCC 115
Query 121 AGGCGAGTTAACTGAGTTAGCTCAGCCGAGTTTCGAGGAGTTTCAGAAACAGACGTCGTT 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 116 AGGCGAGTTGACTGAGTTAGCTCAGCCGAGTTTCGAGGAGTTTCAGAAACAGACGTCGTT 175
Query 181 GATGACTAGCTGTACTCTTCTATGGCAAGAGCTCTCCGATCACTTCACTTCTCTAGAGCA 240
|||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct 176 GATGACAAGCTGTACTCTTCTATGGCAAGAGCTCTCCGATCACTTCACTTCTTTAGAACA 235
Query 241 GAATCTGATGAAGAAATCTGAAGCGTTGAAGCAGATGATTGAAACTCTAGATAACCAGAC 300
||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||
Sbjct 236 GAATCTGATGAAGAAATCTGAAGCGTTGAAGCAGATGATTGAAACGCTAGACAATCAGAC 295
Query 301 TCAGACCTCGCTCGAGTCTCTGAAGCGTAGAGAGGTAACAATCGACCATAGCGTTGAGAT 360
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 296 TCAGACCTCGCTTGAGTCTCTGAAGCGTAGAGAGGTAACAATCGACCATAGCGTTGAGAT 355
Query 361 CGTAGCTGGGAAAGTAGGTGAACGAGCTAGAGCTGCTCTTGAATCGTTAGAGAAAGCTAG 420
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct 356 CGTAGCTGGGAAAGTTGGGGAACGAGCTAGAGCTGCTCTTGAATCGTTAGAGAAAGCTAG 415
Query 421 AGATGGTTGTGGTGATGGTTCTAATGATGATTCCGGTGATGTTGACGATGAAGAAGGTCT 480
|||| | ||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct 416 AGAT-G--GTGGTGATGGTTCTAATGATGATTCCGGTGAGGTTGACGATGAAGAAGGGCT 472
Query 481 TCTTTCTGCTTTGAAATCTCTTTGTCTTAAAATGGATGCGAGAGGTTTTTGGAACTTTGT 540
||| ||||| ||||||||||| |||||||||||||| |||||||| ||||||||||||||
Sbjct 473 TCTCTCTGCGTTGAAATCTCTATGTCTTAAAATGGACGCGAGAGGGTTTTGGAACTTTGT 532
Query 541 GACGGCGAGGAAGAAGGAGTTGGAGAATCTCCGGTCAAAGATTCCGGCGGCGTTGGTTGA 600
|||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct 533 GACGGCGAGGAAGAAGGAATTGGAGAATCTCCGGTCAAAAATTCCGGCGGCGTTGGTTGA 592
Query 601 TTGTGTAGATCCGGCGATGTTAGTGCTTGAAGCGATATCTGAGGTTTTTCCGGTGGATAC 660
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TTGTGTAGATCCGGCGATGTTAGTGCTTGAAGCGATATCTGAGGTTTTTCCGGTGGATAA 652
Query 661 AAGAGGAGATAAAGTTAGCAATGATTATGGATGGGCTTGTGTTGTGATTCTTGAGAGTTT 720
|||| |||||||| | ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 653 AAGATGAGATAAAATGAGCAATGATTATGGATGGGCTTGTGTTGTGATTCTAGAGAGTTT 712
Query 721 AACACCTGTAATTGTTGATCCAGTGATTGGGAAATCGAGGTTGCTTGTTACTCCGAGTGT 780
|||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 713 AACACCTGTAATGGTTGATCCAGTGATCGGGAAATCGAGGTTGCTTGTTACTCCGAGCGT 772
Query 781 TAAGGAGAAAGCTAAGGAGATTGCTGAGACGTGGAAGAAGAGTTTGGAAGAGAGAGGAAG 840
||||||||| ||||||||||| ||||||||||||||| ||| |||||||||||||||||
Sbjct 773 TAAGGAGAAGGCTAAGGAGATAGCTGAGACGTGGAAGGCGAGCTTGGAAGAGAGAGGAAG 832
Query 841 GATAGAGAATGTGAAGACTCCTGATGTTCATACGTTTTTGCAGCATCTTGTTACATTTGG 900
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 833 GATAGAGAATGTGAAGACTCCTGATGTTCATACGTTTCTGCAGCATCTTGTTACATTTGG 892
Query 901 AATTGTTAAAAGTGAAGATCTTGCTTTGTATAGAAAGCTTGTTGTTGGATCTGCGTGGCG 960
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 893 AATTGTTAAAAGTGAAGATCTTGCTTTGTATAGAAAGCTTGTCGTTGGATCTGCGTGGCG 952
Query 961 TAAACAGATGCCTAAGCTTGCGGTTTCTGTTGGTTTGGGTGATCAAATGCCTGACATGAT 1020
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 953 TAAACAGATGCCTAAGCTTGCTGTTTCTGTTGGTTTGGGTGATCAAATGCCTGACATGAT 1012
Query 1021 TGAAGAATTAATCAGCAGGGGACAACAGCTTGATGCTGTTCATTTTACTTATGAAGTTGG 1080
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1013 TGAAGAATTAATCAGCAGGGGACAACAGCTTGATGCTGTTCATTTTACTTATGAAG-TGG 1071
Query 1081 G-CTTGTGGATAAGTTCCCTCCTGTTCCTTTGCTCAAAGCTTATCTAAGGGACGCAAAGA 1139
| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1072 GTCTTGTGGATAAGTTTCCTCCTGTTCCTTTGCTCAAAGCTTATCTAAGGGACGCAAAGA 1131
Query 1140 AGTCAGCAGCTTCTATCATGGAGGACTCTAGCAATACTGGCCGAGCTACGCATCTCGTGG 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1132 AGTCAGCAGCTTCTATCATGGAGGACTCTAGCAATACTGGCCGAGCTACGCATCTCGTGG 1191
Query 1200 CGCGCAAGGAGCAATCAGCACTTAAGGCGGTTTTAAAATGCATAGAAGAGTACAAACTCG 1259
||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct 1192 CGCGCAAGGAGCAATCAGCACTTAAGGCGGTCTTGAAATGCATAGAAGAGTACAAACTCG 1251
Query 1260 AGGAAGAGTTCCCTCCAGAGAACCTCAAGAAACGGTTGGATCAGCTAGAGAAGACCAAAA 1319
||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1252 AGGAAGAATTCCCTCCAGAGAACCTCAAGAAGCGGTTGGATCAGCTAGAGAAGACCAAAA 1311
Query 1320 CCGAGAAGAGAAAGCCAGCAGCTGTTCCTGCCAACAAAAGAACCCGAGCCAGCTACAACG 1379
||||||||||||| ||||||||||| ||||| ||||| |||||||||||||| |||||||
Sbjct 1312 CCGAGAAGAGAAAACCAGCAGCTGTGCCTGCAAACAAGAGAACCCGAGCCAGTTACAACG 1371
Query 1380 GTCCAATGCCACCAGCCAAAGCCGGGCGTATCACAAACGCATACGTCTCTTCCTTCCCGT 1439
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1372 GTCCAATGCCACCAGCCAAAGCCGGGCGTATCACAAACGCATACGTCTCTTCCTTCCCTT 1431
Query 1440 TCATCAGATCACCCTCTCACTCTCCTCAATACGCTTCACCAGCAGCTTACCCATCCCCAC 1499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1432 TCATCAGATCACCCTCTCACTCTCCTCAATACGCTTCACCAGCAGCTTACCCATCCCCAC 1491
Query 1500 CTACAACAGTCTACAGCAACAGAAGCCCACCTTATCCATACTCTCCGGAGATCATCCCAG 1559
|||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct 1492 CTACCACAGTCTACAGCAACAGAAGCCCACCTTATCCATACTCTCCCGAAATCATCCCAG 1551
Query 1560 GCTCATACCAAGGCTCTCCTATCGGTTACCCAGCGTACAACGGTTATTGTAATGGTCCAG 1619
|||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||
Sbjct 1552 GCTCATACCAAGGCTCTCCTATCGGTTACCCAGCATACAACGGCTATTGCAATGGTCCAG 1611
Query 1620 TTCCTGCTCCAGCTCCTCCAGTTTACCACCCACACCATCATCAACACCACCAATTCCACC 1679
||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct 1612 TTCCTGCTCCAGCTCCTCCTGTTTACCACCCGCACCATCATCAACACCACCAATTCCACC 1671
Query 1680 ATCAGCAACATTACTACTGAATTAGAAGACAGTGTGACAACAAAACAAG--G-AAGAAGA 1736
||||||||||||||||||||||||| |||||||||||||||||||||| | |||||||
Sbjct 1672 CTCAGCAACATTACTACTGAATTAGA-GACAGTGTGACAACAAAACAAGAAGGAAGAAGA 1730
Query 1737 TTGGT--AATAACCAA-CAAATCACTGATACTGTGACAACTGCTACTACTCTGGTGTTCT 1793
| ||| ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||
Sbjct 1731 TGGGTGTAATAACCAAACAA-TCACTGATACTGTGACAACTGCTACTACTCCGGTGTTCT 1789
Query 1794 CTCTCTCTGGGTCTATTGTCTTCCTACGTCGTCGTTTTTGTCTGTAATATCTCTTTCTCA 1853
|||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 1790 CTCT----GGGTCTATTGTCTTTCTACGTCGTCGTTTTTGTCTGTAATATCTCTT-CTCA 1844
Query 1854 G-CCTAACTCTCTTAGTAACTTAGCT-TATATCCTCTGGTGTGTTTATTATTAATCGCAT 1911
| |||||||||||||||||||||||| ||| ||||||||||||||||||| | || |||
Sbjct 1845 GACCTAACTCTCTTAGTAACTTAGCTATATCTCCTCTGGTGTGTTTATTA--A-TCACAT 1901
Query 1912 ATAAAACAAAACTCAAGCTTTTGTAATGTCTAATATTCAGTCAACAAACTTATATTTCTG 1971
|||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1902 ATAAAA-AAAACTCAAGCTTTTGTAATGTCTAATATTCAGTCAACAAACTTATCTTTCT- 1959
Query 1972 TACTCTGTTAATCGAATGACAAACTTCTCT 2001
|| | |||| ||||||||||||||||
Sbjct 1960 --CT-T---AATCAAATGACAAACTTCTCT 1983
> Ahg946855 jgi|Araly1|946855|scaffold_703084.1
Length=1639
Score = 1356 bits (734), Expect = 0.0
Identities = 1347/1633 (82%), Gaps = 81/1633 (5%)
Strand=Plus/Plus
Query 88 TCCGATT--CCGGCGATGGGGTCAGTC-CCCGATCCAGGCGAGTT-AACTGAGTTAGCTC 143
||||||| |||| ||||| ||| || ||||||||||| ||||| | | |||| |||||
Sbjct 6 TCCGATTAACCGGAGATGGAGTC-TTCTCCCGATCCAGGTGAGTTGATC-GAGTCAGCTC 63
Query 144 AGCCGAGTTTCGAGGAGTTTCAGAAACAGACGTCGT-TGATGACTAGCTGTACTCTTCTA 202
|||||||||||| || |||||||| |||||||| | | ||||| ||||| | |||||||
Sbjct 64 AGCCGAGTTTCGTTGAATTTCAGAAGCAGACGTC-TCTAATGACGAGCTGCAATCTTCTA 122
Query 203 TGGCAAGAGCTCTCCGATCACTTCACTTCTCTAGAGCAGAATCTGATGAAGAAATCTGAA 262
||| |||||||||| || || ||||||||| | |||||||||||||||||||||||||||
Sbjct 123 TGGAAAGAGCTCTCTGAGCATTTCACTTCTATGGAGCAGAATCTGATGAAGAAATCTGAA 182
Query 263 GCGTTGAAGCAGATGATTGAAACTCTAGATAACCAGACTCAGACCTCGCTCGAGTCT-CT 321
|| ||||| |||||||||||||| |||||||| || || |||| |||| | |||| | ||
Sbjct 183 GCTTTGAAACAGATGATTGAAACCCTAGATAATCAAACGCAGAACTCGATTGAGT-TACT 241
Query 322 GAAGCGTAGAGAGGTAACAATCGACCATAGCGTTGAGATCGTAGCTGGGAAAGTAG-GTG 380
|||| | | ||||| || || ||||| ||||||||||||| ||||||||||| | | |
Sbjct 242 CAAGCATCGTGAGGTGACTATAGACCACAGCGTTGAGATCGCGGCTGGGAAAGTTGAG-G 300
Query 381 AACGAGCTAGAGCTGCTCTT-GAATCGTTAGAGAAAGCTAGAGATGGTTGTGGTGATGGT 439
||||||||||||| || || || || | ||||||||||||| | | | ||| ||
Sbjct 301 AACGAGCTAGAGCCGC-GTTGGATTCACTGGAGAAAGCTAGAG-CCG-CG-GATGA-GG- 354
Query 440 TCTAATGATGATTCCGGTGATGTTGACGATGAAGAAGGTCTTCTTTCTGCTTTGAAATCT 499
| ||| | ||| || |||||||| | || || |||| || || |||||||
Sbjct 355 ----ACGAT-A--ACGGAGAGGTTGACGACGGCGACGGGATTCTATCGGCGCTGAAATCG 407
Query 500 CTTTGTCTT-AAAATGGATGCGAGAGGTTTTTGGAACTTTGTGACGGCGAGGAAGAAGGA 558
|||||| || || ||||| || ||||| |||||| | ||||||| ||||||||||| ||
Sbjct 408 CTTTGT-TTGAAGATGGACGCAAGAGGATTTTGGGATTTTGTGATTGCGAGGAAGAAAGA 466
Query 559 GTTGGAGAATCTCCGGTCAAAGATTCCGGCGGCGTTGGTTGATTGTGTAGATCCGGCGAT 618
|||||||||||||||||| ||||||||| |||||||||||||||||| |||||| |||
Sbjct 467 ATTGGAGAATCTCCGGTCACAGATTCCGGTGGCGTTGGTTGATTGTGTGGATCCGCCGAA 526
Query 619 GTTAGTGCTTGAAGC-GATATCTGAGGTTTTTCCGGTGGATACAAGA------GGAGATA 671
|||||| |||||||| | |||||||||||||||||||||||| |||| ||||| |
Sbjct 527 GTTAGTACTTGAAGCTG-TATCTGAGGTTTTTCCGGTGGATAAAAGAGGCGGTGGAGAGA 585
Query 672 AAGTTAGCAATGATTATGGATGGGCTTGTGTTGTGATTCTTGAGAGTTTAACACCTGTAA 731
|||| ||||| |||| ||||||||||||||| ||||||||||||||||| | || || |
Sbjct 586 AAGTGAGCAACGATTTTGGATGGGCTTGTGTGGTGATTCTTGAGAGTTTGATTCCAGTTA 645
Query 732 TTGTTGATCCAGTGATTGGGAAATCGAGGTTGCTTGTTACTCCGAGTGTTAAGGAGAAAG 791
| |||||||||||||| ||||| || || ||||||| |||||||| |||||| ||||||
Sbjct 646 TGGTTGATCCAGTGATGGGGAAGTCTCGGCTGCTTGTAACTCCGAGCGTTAAGAAGAAAG 705
Query 792 CTAAGGAGATTGCTGAGACGTGGAAGAAGAGTTTGGAAGAGAGAGGAAGGATAGAGAATG 851
|||||||||||||||||||||||||| ||| ||||||||||||||| |||| |||||||
Sbjct 706 CTAAGGAGATTGCTGAGACGTGGAAGGCGAGCTTGGAAGAGAGAGGAGGGATTGAGAATG 765
Query 852 TGAAGACTCCTGATGTTCATACGTTTTTGCAGCATCTTGTTACATTTGGAATTGTTAA-A 910
|||| || |||||||||||||||||| |||| |||||||| |||||||| ||||| || |
Sbjct 766 TGAAAACACCTGATGTTCATACGTTTCTGCAACATCTTGTGACATTTGGGATTGTGAAGA 825
Query 911 AGTGAAGATCTTGCTTTGTATAGAAAGCTTGTTGTTGGATCTGCGTGGCGTAAACAGATG 970
|| || ||||||||| | ||||| |||||||| |||||||| || |||||||||||||||
Sbjct 826 AG-GATGATCTTGCTCTCTATAGGAAGCTTGTGGTTGGATCAGCTTGGCGTAAACAGATG 884
Query 971 CCTAAGCTTGCGGTTTCTGTTGGTTTGGGTGATCAAATGCCTGACATGATTGAAGAATTA 1030
||||||||||| ||||| |||||||||||||| ||||||||||| ||||| ||||| ||
Sbjct 885 CCTAAGCTTGCTGTTTCAGTTGGTTTGGGTGACCAAATGCCTGATATGATAGAAGAGTTG 944
Query 1031 ATCAGCAGGGGACAACAGCTTGATGCTGTTCATTTTACTTATGAAGTTGGGCTTGTGGAT 1090
||| ||||||||||||||||||||| |||||||| |||| ||||||||| |||||| |
Sbjct 945 ATCTTCAGGGGACAACAGCTTGATGCGGTTCATTTCACTTTTGAAGTTGGTCTTGTGCAC 1004
Query 1091 AAGTTCCCTCCTGTTCCTTTGCTCAAAGCTTATCTAAGGGACGCAAAG-AAGTCAGCAGC 1149
|| |||||||||||||||||||| ||||||||||| ||||| |||||| ||| || ||||
Sbjct 1005 AAATTCCCTCCTGTTCCTTTGCTTAAAGCTTATCTGAGGGATGCAAAGAAAG-CAACAGC 1063
Query 1150 TTCT-ATCATGGAGGACTCTAGCAATACTGGCCGAGCTACGCATCTCGTGGCGCGCAAGG 1208
|| | |||| ||||| || | |||| |||||||| || ||||||| |||||||||||||
Sbjct 1064 TT-TAATCACAGAGGAGTCCAACAATCCTGGCCGATCTGCGCATCTTGTGGCGCGCAAGG 1122
Query 1209 AGCAATCAGCACTTAAG-GCGGTTTTAAAATGCATAGAAGAGTACAAACTCGAGGAAGAG 1267
|||||||||||| | || || || ||||||||||||||||| |||||||||||||||||
Sbjct 1123 AGCAATCAGCAC-TCAGAGCAGTCTTAAAATGCATAGAAGAATACAAACTCGAGGAAGAA 1181
Query 1268 TTCCCTCCAGAGAACCTCAAGAAACGGTTGGATCAGCTAGAGAAGACCAAAACCGAGAAG 1327
||||| || ||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1182 TTCCCGCCCGAGAATCTCAAGAAGCGGTTGGATCAGCTAGAGAAGACCAAAACCGAGAAG 1241
Query 1328 AGAAAGCCAGCAGCTGTTCCTGCCAACAAAAGAACCCGAGCCAGCTACAACGGTCCAATG 1387
||||| |||||||| ||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 1242 AGAAAACCAGCAGCAATTCCTGCCAACAAGAGAACCCGAGCGAGCTACAACGGTCCAATG 1301
Query 1388 CCACCAGCCAAAGCCGGGCGTATCACAAACGCATACGTCTCTTCCTTCCC---GT-TC-A 1442
|||||||||||||| ||||||||||||||||| |||||||| |||||||| | || |
Sbjct 1302 CCACCAGCCAAAGCAGGGCGTATCACAAACGCTTACGTCTCCTCCTTCCCACCGCCTCCA 1361
Query 1443 TCAG-AT-CA-C----CCTCT--C-ACTCTCCTCAATACGCT-TCACCAGCAG-CTTACC 1490
|| || || | || | | |||| ||||| |||| | | ||||||| | |||
Sbjct 1362 CCAACATTCATCAGATCCCCAAGCCACTCACCTCAGTACGGTGT-ACCAGCATAC--ACC 1418
Query 1491 -CATCCCCACCTACAACAGTCTACAGCAACAGAAGCCCACCTTATCCA-TACTCTCCGGA 1548
||||| ||||||| || ||||||||||||| ||||| || || ||| ||||| || ||
Sbjct 1419 ACATCCTCACCTAC--CA-TCTACAGCAACAGGAGCCCTCCATA-CCAATACTCACCCGA 1474
Query 1549 GATCA-TCC-CAGGCTCATACCAAGGCTCTCCTATCGGTTACCCAGC-GTACAACGGTTA 1605
| || | | | || |||||||||| |||||| || |||| ||||| | | | ||| |
Sbjct 1475 GG-CAGTTCACGGG-TCATACCAAGTTTCTCCTGTCAGTTATCCAGCAGCATAT-GGT-A 1530
Query 1606 TTGTAATG--GTCCAGTTCCTGCTCCAGCTCCTCCAGTTTACCACCCACACCATCATCAA 1663
| || || |||| || |||||||| | |||||||||||||| || |||| || ||
Sbjct 1531 CT-TACTGCAGTCCGGTGGCTGCTCCACCCCCTCCAGTTTACCATCCTCACCCGCACCAC 1589
Query 1664 CACCACCA-ATTC 1675
|||||||| ||||
Sbjct 1590 CACCACCATATTC 1602
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 75685316815
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5