BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G24500.1 Length=630 Score E Sequences producing significant alignments: (Bits) Value Ahg479959 jgi|Araly1|479959|fgenesh2_kg.3__2660__AT3G24500.1 732 0.0 > Ahg479959 jgi|Araly1|479959|fgenesh2_kg.3__2660__AT3G24500.1 Length=447 Score = 732 bits (396), Expect = 0.0 Identities = 430/447 (96%), Gaps = 0/447 (0%) Strand=Plus/Plus Query 77 ATGCCGAGCAGATACCCAGGAGCAGTAACACAAGACTGGGAACCAGTAGTTCTCCACAAA 136 |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| Sbjct 1 ATGCCGAGCAGATACCCAGGAGCAGTGACACAAGACTGGGAACCAGTAATTCTCCACAAA 60 Query 137 TCAAAACAAAAGAGCCAAGACCTACGCGATCCGAAAGCGGTTAACGCAGCTCTGAGAAAC 196 |||||||||||||| ||||||||||||||||| ||||||||||||||||| || |||||| Sbjct 61 TCAAAACAAAAGAGTCAAGACCTACGCGATCCAAAAGCGGTTAACGCAGCGCTTAGAAAC 120 Query 197 GGTGTCGCGGTTCAAACGGTTAAGAAATTCGATGCCGGTTCGAACAAAAAGGGGAAATCT 256 || ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct 121 GGCGTCGCGGTTCAAACGGTTAAGAAATTCGACGCCGGTTCTAACAAAAAGGGGAAATCT 180 Query 257 ACGGCGGTTCCGGTGATTAACACGAAGAAGCTGGAAGAAGAAACAGAGCCTGCGGCGATG 316 |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct 181 ACGGCGGTTCCGGTTATTAACACGAAGAAGCTGGAGGAAGAAACAGAGCCTGCGGCGATG 240 Query 317 GATCGTGTGAAAGCAGAGGTGAGGTTGATGATACAGAAAGCGAGATTGGAGAAGAAGATG 376 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 241 GATCGTGTGAAAGCAGAGGTGAGGTTGATGATACAGAAGGCGAGATTGGAGAAGAAGATG 300 Query 377 TCACAAGCGGATTTGGCGAAACAGATCAATGAGAGGACTCAGGTAGTTCAGGAATATGAG 436 || ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct 301 TCGCAAGCGGATTTGGCGAAACAGATCAATGAAAGGACTCAGGTGGTTCAGGAATATGAG 360 Query 437 AATGGTAAAGCTGTTCCTAATCAGGCTGTGCTTGCGAAGATGGAGAAGGTTCTAGGTGTT 496 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 361 AATGGTAAAGCTGTTCCTAATCAAGCTGTGCTTGCGAAGATGGAGAAGGTTCTAGGTGTT 420 Query 497 AAACTTAGGGGTAAAATTGGGAAATGA 523 |||||||||||||||||||| |||||| Sbjct 421 AAACTTAGGGGTAAAATTGGTAAATGA 447 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 23064364785 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5