BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G25840.1 Length=3414 Score E Sequences producing significant alignments: (Bits) Value Ahg484347 jgi|Araly1|484347|fgenesh2_kg.5__339__AT3G25840.1 4713 0.0 Ahg485754 jgi|Araly1|485754|fgenesh2_kg.5__1746__AT3G53640.1 935 0.0 Ahg928493 jgi|Araly1|928493|scaffold_300950.1 124 3e-27 > Ahg484347 jgi|Araly1|484347|fgenesh2_kg.5__339__AT3G25840.1 Length=3152 Score = 4713 bits (2552), Expect = 0.0 Identities = 2897/3059 (95%), Gaps = 42/3059 (1%) Strand=Plus/Plus Query 84 ATTTCGA-TTACGACGATACTCTCTGATGGCGAACGATAAGCAGATCGAATCTCACCACC 142 ||||||| || ||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct 1 ATTTCGACTT-CGACGATCCTCTCTGATGGCGAACGATAAGCAAATCGAATCTCACCACC 59 Query 143 GCAAGCATCACCGTTCATCTTCGTCGTCCGATGACACTGAAAAAGCATCGAAACGACACA 202 |||||||||||||||||||||| |||||||| || || || ||| |||||||||| |||| Sbjct 60 GCAAGCATCACCGTTCATCTTCCTCGTCCGACGAGACCGAGAAATCATCGAAACGGCACA 119 Query 203 AGCATCGTCATCACAAG---CATCATCACCACAGGCATCGCCATCACCGAGATAAGAAGC 259 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 120 AGCACCGTCATCACAAGCATCATCATCACCACAGGCATCGCCATCACCGAGATAAGAAGC 179 Query 260 GCGAAAATGAAATTCCATCCGCCGGCGATGAGACAGAGAT-ATTGGATGTTACTCCGGCG 318 |||| |||||||||||||||||||||||||||||| ||| ||| ||||||||||||||| Sbjct 180 GCGACGATGAAATTCCATCCGCCGGCGATGAGACAGCGATGATT-GATGTTACTCCGGCG 238 Query 319 GCTCCAATTGTTGTTAGTAACGGCTGTGAGGAGGAGGATGTGGAGGAAGGAGAGATTTTA 378 |||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct 239 GCTCCAATTGGTGTTAGTAACGGCTGT---GAGGAGGATGTGGAGGAAGGGGAGATTTTA 295 Query 379 GAAGAAGATGGGATTGGTGATGTTTTGATGAAGACGGCAGATTCCGACGGCGAATCAGGC 438 |||||||||| ||||||||||| |||||| ||||||||||||||||||||||| | |||| Sbjct 296 GAAGAAGATGCGATTGGTGATGGTTTGATAAAGACGGCAGATTCCGACGGCGAGTTAGGC 355 Query 439 GAAATCAAATTTGAAGATAATAATCTGCCTCCACTTGGGGAAAAAGGGCGTCAAGGAGAA 498 ||||| ||| | |||||||||||||||||| |||||||||||||||||||||||||| Sbjct 356 GAAAT-AAA-AT-CCGATAATAATCTGCCTCCATTTGGGGAAAAAGGGCGTCAAGGAGAA 412 Query 499 GAAAAGAGTTCTAATGGTGTTCTAACTCGTGAATCTGAAAGGGAGGATAAGAGGTGGGAT 558 || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 413 GAGGAGACTTCTAATGGTGTTCTAACTCGTGAATCTGAAAGGGAGGATAAGAGGTGGGAT 472 Query 559 AAAGAAGCTGGAGGTCCTTCAGAGAGAGTTAGTAA-ATTAAGTTATGATAATGGC-AGAA 616 ||||| ||| ||||| |||||||||| |||||||| | ||||||||||||||||| || | Sbjct 473 AAAGATGCTAGAGGTACTTCAGAGAGGGTTAGTAAGA-TAAGTTATGATAATGGCAAG-A 530 Query 617 GTTCGTTTTCTCCGTCAAACAGCAGGCAGTCTAACGAAGGCCGTGCCCGGAGTAGATCTA 676 ||||||||||| ||||||| |||||||||||||| |||| |||||| ||||||||||||| Sbjct 531 GTTCGTTTTCTTCGTCAAATAGCAGGCAGTCTAATGAAGTCCGTGCTCGGAGTAGATCTA 590 Query 677 AGTCACATGATCGGGAGAGAGAAACTTCTAGGTCAAGGTTTGCGGAGGATGAGTTTTCGG 736 ||||||||||||||||||||| | || |||||||||||||||||| || Sbjct 591 AGTCACATGATCGGGAGAGAG--------A----AA---TTGCGGAGGATGAGTTTTTGG 635 Query 737 ACAGAGGAAGACATCATGATTCTAGTAGGGATTATCATCATGACAGAGTTGACTCAGTTA 796 ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| || Sbjct 636 ACAGAGGGAGACATCGTGATTCTAGTAGGGATTATCATCATGACAGAGTTGACTCAGGTA 695 Query 797 GGACTGAGGAAAGATATCATCGACGTGGGCGATATGAGGAAAATGACAGGCAATATAGTC 856 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 696 GGGCTGAGGAAAGATATCATCGACGTGGGCGATATGAGGAAAATGACAGGCAATATAGCC 755 Query 857 GAGAAGTCTTGGAAAGAGATAGAAGTAAGGAGAGAGATATGGACAGGGAGGGAAGCATAA 916 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 756 GAGAAGTGTTGGAAAGAGATAGAAGTAAGGAGAGAGATATGGACAGGGAGGGAAGCATAA 815 Query 917 GAGATAGGGATTCGGAAGGAAGTAAGCggagagataaagatagtgatcggaggagggaaa 976 ||||||||||||| |||| |||||| |||||||| ||||||||||||||||||||||||| Sbjct 816 GAGATAGGGATTCAGAAGCAAGTAAACGGAGAGAGAAAGATAGTGATCGGAGGAGGGAAA 875 Query 977 gagaacgagagaagagaagggagatagagtctgaccgtgaaagacgaaaagagaaggaac 1036 |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct 876 GAGAACGAGAGAAGAGAAGGGACATAGAGGCTGACCGTGAAAGACGAAAAGAGAAGGAAC 935 Query 1037 gagagCGCAGCATTGATAGGGATAGGAGAAAGGAGAGGGAAGGAGATTATTTACGGGAta 1096 |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 936 GAGAGCGCAGCACTGATAGGGATAGGAGAAAGGAAAGGGAAGGAGATTATTTACGGGATA 995 Query 1097 gagccaatgagagaggtaggagtagagatagaaccaggtataacagcagagagaggaaga 1156 ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 996 GAGATAATGAAAGAGGTAGGAGTAGAGATAGAACCAGGTATAACAGCAGAGAGAGGAAGA 1055 Query 1157 gagaaaaggaaagggagggtgaaaaagattgggagagaggaagagaaacccagaaagata 1216 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| Sbjct 1056 GAGAAAAGGAAAGGGAGGGTGAAAAAGATTGGGAGCGAGGAAGAGAAACCCAGAATGATA 1115 Query 1217 gggagaaGTACATAAGTAGTGATGTGGACTACGGTGAGATGAGGCACAAACAGTCTAGAA 1276 |||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1116 GGGAGAAGTACAGAAGTAGTGATGTGGACTACGGTGAGATGAGGCACAAACAGTCCAGAC 1175 Query 1277 ACACAAGATATGATGCGGTAGATGACCTAGAAATGAGAAAGCCAAATTCTTTGAAGGCCC 1336 | ||||| ||||||||||||||||| |||||||||||||||||||||||| |||||| | Sbjct 1176 ATTCAAGAGATGATGCGGTAGATGACGTAGAAATGAGAAAGCCAAATTCTTCGAAGGCAC 1235 Query 1337 ATAATTCTAAGGGTGATAAGTTAGAAGAAACGTGGGCCAATGATGAAAGGTCCCGAAATG 1396 |||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||| Sbjct 1236 ATAATTCTAAGGGTGATAAGACAGAAGAAAAGTGGGGCAATGATGAAAGGTCCCGAAATG 1295 Query 1397 AGGATGGTCAAGATGATAATGACGAAGGACTTACATGGAAATCTCCTGAGGAAGAAGAAG 1456 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1296 AGGATGGCCAAGATGATAATGACGAAGGACTTACATGGAAATCTCCTGAGGAAGAAGAAG 1355 Query 1457 AAGAATTACTAAATAGAATCAAGGAAGAGAGCAGGAAGCGAATGGAAGCCATACTGGAGA 1516 ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1356 AAGAAGTACTAAATAGAATCAAGGAGGAGAGCAGGAAGCGAATGGAAGCCATACTGGAGA 1415 Query 1517 AACATAAGAGGAAGCCCGAGCAGCAAAATGAACTTTTAACTCAGGATAATGGGAAAGATA 1576 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1416 AACATAAGAAGAAGCCCGAGCAGCAAAATGAACTTTTAACTCAGGATAATGGGAAAGATG 1475 Query 1577 TTGTTCCAGAAACTGGTGCTCCAGTGTCGACTTCTCCTGCAGTTGTCATAGCAGCTAATG 1636 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1476 TTGTTCAAGAAACTGGTGCTCCAGTGTCGACTTCTCCTGCAGTTGTCATAGCAGCTAATG 1535 Query 1637 TAGGCCAGGCCAAAACTAACTTGGACTTTGATACTGTCGCTGCCAAGGCACCATTAATAG 1696 | || ||||| ||||||||||||||||||||||||| || |||||||||| ||||||||| Sbjct 1536 TTGGTCAGGCTAAAACTAACTTGGACTTTGATACTGACGTTGCCAAGGCATCATTAATAG 1595 Query 1697 CCGGTGGGCCACCTACTATGTC-TGGAATTTCAGACTCAGAGAAGAATCAAGCTCAAGCG 1755 |||||||||||||||||| | | ||||||||||||||||||||||||||||| |||| Sbjct 1596 TCGGTGGGCCACCTACTAT-ACTTCCAATTTCAGACTCAGAGAAGAATCAAGCTCCAGCG 1654 Query 1756 GGGCTTGGTGAAGGTAGCCCGAAGAGTGAAAGGTCAGCTGACATGTTTCATGATGATATC 1815 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1655 GGGCTTGGTGAAGGTAGCCCGAAGAGTGAAAGATCAGCTGACATGTTTCATGATGATATC 1714 Query 1816 TTTGGAGAGTCCCCGGCTGGTATCCGAAAAGTGGGAGGGAAAGGTGATGGTGTTCCCATG 1875 |||||||||||||| |||||| | || ||||||||||||||||||||||||||||||||| Sbjct 1715 TTTGGAGAGTCCCCAGCTGGTGTTCGGAAAGTGGGAGGGAAAGGTGATGGTGTTCCCATG 1774 Query 1876 GTGAGGAGCGGGCTTCATGATAATTGGGATGATGCAGAGGGTTATTATAGCTATCAGTTT 1935 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1775 GTGAGGAGCGGGCTTCATGATAATTGGGATGATGCAGAGGGTTATTATAGCTATCAGTTT 1834 Query 1936 GGCGAGTTACTTGATGGTAGATATGAAGTCATTGCTACTCATGGAAAAGGTGTCTTCTCT 1995 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1835 GGCGAGTTACTTGATGGTAGATATGAAGTCATTGCTACTCATGGAAAAGGTGTCTTCTCT 1894 Query 1996 ACTGTGGTTCGTGCTAAAGACTTGAAAGCTGGACCAGCTGAACCTGAAGAGGTGGCAATA 2055 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1895 ACTGTGGTTCGTGCGAAAGACTTGAAAGCTGGACCAGCTGAACCTGAAGAGGTGGCTATA 1954 Query 2056 AAAATTATCCGTAACAATGAGACGATGCATAAAGCTGGAAAGATTGAGGTTCAAATATTG 2115 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1955 AAAATTATCCGTAACAATGAGACGATGCATAAAGCTGGCAAGATTGAGGTTCAAATATTG 2014 Query 2116 AAGAAGCTGGCAGGCGCTGACCGAGAAGACAGGCGCCACTGTGTTCGATTTCTTTCAAGC 2175 ||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct 2015 AAGAAGCTGGCTGGCGCTGACCGAGAGGACAGGCGCCACTGTGTTCGTTTTCTTTCAAGC 2074 Query 2176 TTTAAGTACCGTAATCACCTTTGCTTGGTGTTTGAGTCGCTCCATTTGAATCTTCGTGAG 2235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2075 TTTAAGTACCGTAATCACCTTTGCTTGGTGTTTGAGTCGCTCCATTTGAATCTTCGTGAG 2134 Query 2236 GTCTTGAAGAAGTTTGGTCGCAACATTGGTCTCCAACTCTCTGCTGTTAGGGCTTATTCA 2295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2135 GTCTTGAAGAAGTTTGGTCGCAACATTGGTCTCCAACTCTCTGCTGTTAGGGCTTATTCA 2194 Query 2296 AAGCAGCTATTCATTGCTCTTAAACATCTGAAGAATTGTGGGGTACTTCACTGCGATATA 2355 ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| Sbjct 2195 AAGCAGCTATTCATTGCCCTTAAACATCTGAAGAATTGTGGGGTTCTTCACTGCGATATA 2254 Query 2356 AAACCTGACAACATGCTGGTCAATGAGGGGAAAAATGTCTTAAAGCTTTGTGATTTTGGT 2415 ||||||||||||||||||||||| |||||||||||||| |||||||||||||| || ||| Sbjct 2255 AAACCTGACAACATGCTGGTCAACGAGGGGAAAAATGTGTTAAAGCTTTGTGACTTCGGT 2314 Query 2416 AATGCAATGTTTGCAGGCAAAAACGAAGTTACACCGTATCTTGTTAGTCGCTTTTACAGA 2475 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2315 AATGCAATGTTTGCTGGCAAAAACGAAGTTACACCGTATCTTGTTAGTCGCTTTTACAGA 2374 Query 2476 TCCCCTGAAATTA-T---T--CTGGGGCTCACCTATGACCATCCGTTGGATATATGGTCT 2529 ||||||||||||| | | ||||| ||||||||||||||||||||||||||||||||| Sbjct 2375 TCCCCTGAAATTAGTAAGTATCTGGGTCTCACCTATGACCATCCGTTGGATATATGGTCT 2434 Query 2530 GTTGGCTGCTGTCTGTATGAGCTTTATAGTGGAAAAGTTCTTTTCCCTGGCGCCACAAAC 2589 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2435 GTTGGCTGCTGTCTGTATGAGCTTTATAGTGGAAAAGTTCTTTTCCCTGGCGCCACAAAC 2494 Query 2590 AATGATATGTTACGCCTTCATATGGAACTGAAAGGTCCCTTCCCTAAAAAGATGCTTCGC 2649 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2495 AATGATATGTTACGACTTCATATGGAACTGAAAGGTCCCTTCCCTAAAAAGATGCTTCGC 2554 Query 2650 AAGGGAGCATTTATTGATCAGCACTTTGATCATGACTTGAACTTTTATGCTACAGAGGAA 2709 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2555 AAGGGAGCATTTATTGATCAGCACTTTGATCATGACTTGAACTTTTATGCTACAGAGGAA 2614 Query 2710 GACACCGTTAGTGGAAAGCTGATAAAAAGAATGATCGTAAACGTGAAGCCGAAAGATTTT 2769 ||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||| Sbjct 2615 GACACCGTTAGTGGAAAGCTGATTAAAAGAATGATCGTAAACGTAAAGCCAAAAGATTTT 2674 Query 2770 GGTTCCATCATTAAAGGTTACCCTGGTGAGGATCCCAAGATCTTAGCTCATTTCAGGGAT 2829 ||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct 2675 GGTTCAATCATTAAAGGTTACCCTGGTGAGGATCCCAAGATGTTAGCACATTTCAGGGAT 2734 Query 2830 CTCTTGGACAAAATGTTCATCCTTGATCCCGAGAGGAGACTGACTGTGTCACAGGCATTA 2889 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2735 CTCTTGGACAAAATGTTCATCCTTGATCCCGAGAGGAGACTGACTGTGTCACAGGCATTA 2794 Query 2890 GCTCACCCATTCATCACTGGCAAGTGAAACCACATTGCCATTTTCCCTCTCTGTTGTATC 2949 |||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||| Sbjct 2795 GCTCACCCATTCATCACTGGCAAGTGAAACCACATTGCCACTTTC--TCTCTGTTATATC 2852 Query 2950 AGGAAATGCTGTTGTCCTAGATATCTGTACATTAAATATCTTAATTACCATTGAAGGATC 3009 |||||||||||||||||||||||||||||||||| | ||||||||||| ||| ||||||| Sbjct 2853 AGGAAATGCTGTTGTCCTAGATATCTGTACATTACACATCTTAATTACAATTTAAGGATC 2912 Query 3010 TAATCTTTGAATTTTCTCTACCTTCCCTCTGCTGCCTGAGAGAGCTTTGGTTACAATGTC 3069 |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| Sbjct 2913 TAATCTTTGAATTTTCTCTACCTTCCTTCTGCTGCCTGAGAGAGCTTTGATTACAATGTC 2972 Query 3070 GACATGGGTGGAGTTCTCATTACCGACGATTCTCAGGGGACTTTACTGGTTCTCTATTG 3128 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2973 GACATGGGTGGAGTTCTCATTACCGACGATTCTCAGGGGACTTTACTGGTTCTCTATTG 3031 > Ahg485754 jgi|Araly1|485754|fgenesh2_kg.5__1746__AT3G53640.1 Length=1917 Score = 935 bits (506), Expect = 0.0 Identities = 946/1151 (82%), Gaps = 59/1151 (5%) Strand=Plus/Plus Query 1794 TGACATGTTTCA-TGATGATATCTTTGGAGAGTC-CC--CGGCTGGTATC-CGAAAAGTG 1848 ||||||| |||| ||||||||||||||| ||||| || | ||||||| | || ||| Sbjct 798 TGACATG-TTCAGTGATGATATCTTTGGGGAGTCTCCAGCTGCTGGTA-CTCGGAAA--- 852 Query 1849 GGAGGGAAAGGTGATGGTGTTCCCATGGTGAGGAGCGGGCTTCATGATAATTGGGATGAT 1908 ||| || || | |||||| | || ||||| || || |||||||||||||||||| Sbjct 853 GGA---AATGG-CCT--TGTTCCTTTTGTAAGGAGTGGACTCCATGATAATTGGGATGAT 906 Query 1909 GCAGAGGGTTATTATAGCTATCAGTTTGGCGAGTTACTTGATGGTAGATATGAAGTCATT 1968 ||||| || || || || ||||||||||| || ||||||||| ||| |||||| |||| Sbjct 907 GCAGAAGGATACTACAGTTATCAGTTTGGTGAACTACTTGATGATAGGTATGAAATCATG 966 Query 1969 GCTACTCATGGAAAAGGTGTCTTCTCTACTGTGGTTCGTGCTAAAGACTTGAAAGCTGGA 2028 ||||||||||||||||||||||||||||| ||||| || || |||||| ||| ||| | Sbjct 967 GCTACTCATGGAAAAGGTGTCTTCTCTACCGTGGTGCGGGCAAAAGACACAAAACCTGAA 1026 Query 2029 CCAGCTGAACCTGAAGAGGTGGCAATAAAAATTATCCGTAACAATGAGACGATGCATAAA 2088 | |||||||||||| || ||||| |||||| |||| || ||||||||||| |||||||| Sbjct 1027 CTAGCTGAACCTGAGGAAGTGGCTATAAAATTTATTCGGAACAATGAGACAATGCATAAG 1086 Query 2089 GCTGGAAAGATTGAGGTTCAAATATTGAAGAAGCTGGCAGGCGCTGA-CC-GAGAAGACA 2146 ||||| || |||| ||| |||||||||||||| || ||| |||| || ||||| | | Sbjct 1087 GCTGGCCAGGCTGAGATTCGGATATTGAAGAAGCTAGCTGGCTCTGACCCAGAGAATA-A 1145 Query 2147 GGCGCCACTGTGTTCGAT-TTCTTTCAAGC-TTTAAGTACCGTAATCACCTTTGCTTGGT 2204 ||||||||| || || | ||||||||| | ||||| || | || |||||||||||||| Sbjct 1146 -GCGCCACTGCGTCCG-TCTTCTTTCAA-CTTTTAAATATAGGAACCACCTTTGCTTGGT 1202 Query 2205 GTTTGAGTCGCTCCATTTGAATCTTCGTGAGGTCT-TGAAGAAGTTTGGTCG-CAACATT 2262 ||||||||| || ||| ||||||| ||||| || | |||||||| ||||| | ||||||| Sbjct 1203 GTTTGAGTCTCTTCATCTGAATCTCCGTGAAGT-TGTGAAGAAGATTGGT-GTCAACATT 1260 Query 2263 GGTCTCCAACTCTCTGCTGTTAGGGCT-TATTCAAAGCAGCTATTCAT-TGCTCTTAAAC 2320 ||||| |||| |||| |||||| | | ||| | ||||| ||||||| | | ||||||| Sbjct 1261 GGTCTAAAACTATCTGATGTTAGAG-TGTATGCTGAGCAGTTATTCATAT-CCCTTAAAC 1318 Query 2321 ATCTGAAGAATTGTGGGGTACTTCACTGCGATATAAAACCTGACAACATGCTGGTCAATG 2380 |||| |||||||||||||| ||||||||||||||||| ||||||||||| || || |||| Sbjct 1319 ATCTCAAGAATTGTGGGGTTCTTCACTGCGATATAAAGCCTGACAACATACTAGTGAATG 1378 Query 2381 AGGGGA-AAA-ATGTCTTAAAGCTTTGTGATTTTGGTAATGCAATGTTTGCAGGCAAAAA 2438 |||||| ||| ||| |||||||||||||| ||||||| |||||||||||| || |||| Sbjct 1379 AGGGGAGAAACATG--TTAAAGCTTTGTGACTTTGGTAGTGCAATGTTTGCTGGTGAAAA 1436 Query 2439 CGAAGTTACACCGTATCTTGTTAGTCGCTTTTACAGATCCCCTGAAATTATTCTGGGGCT 2498 | |||||||||| ||||||||||||||||| |||||| | || ||||| ||||| || || Sbjct 1437 CCAAGTTACACCATATCTTGTTAGTCGCTTCTACAGAGCTCCAGAAATCATTCTTGGACT 1496 Query 2499 CA-CCTATGACCATCCGTTGGATATATGGTCTGTTGGCTGCTGTCTGTATGAGCTTTATA 2557 | |||| ||||||||||| ||||| |||||||| || || || |||||||||||||||| Sbjct 1497 -ATCCTACGACCATCCGTTAGATATCTGGTCTGTGGGTTGTTGCCTGTATGAGCTTTATA 1555 Query 2558 G-TGGAAAAGTTCTTTTCCCTGGCGCCACAAACAATGATATGTTACGCCTTCATATGGAA 2616 | |||||| || | ||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1556 GCGGGAAAA-TTATGTTCCCTGGCTCCACAAACAATGATATGTTACGCCTTCATATGGAA 1614 Query 2617 CTGAAAGGTCCCTTCCCTAAAAAGATGCTTCGCAAGGGAGCATTTATTGATCAGCACTTT 2676 ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct 1615 CTGAAAGGTCCCTTCCCTAAAAAGATGCTTCGCAAAGGAGCATTTATCGATCAGCACTTC 1674 Query 2677 GATCATGACTTGAA-CTTTTATGCTACAGAGGAAGACACCGTTAGTGGAAAG-CTGATAA 2734 ||| | ||||| | ||| |||||||||||||| || | |||| ||||||| | |||| Sbjct 1675 GATAAGGACTT-ATGCTTCTATGCTACAGAGGAGGATAGTGTTACTGGAAAGACC-ATAA 1732 Query 2735 AAAGAATGATCGTAAACGTGAAGCCGAAAGATTTTGGTTCCA-TCATTAAA-G--GTTAC 2790 ||||| || |||||| | ||||| |||||||| ||||| | | |||| | | |||| Sbjct 1733 GGAGAATAATGGTAAACATAAAGCCAAAAGATTTAGGTTC-AGTAATTAGACGACGTTAT 1791 Query 2791 CCTGG-TGAGGATCCCAA-GATCTTAGCTCATTTCAGGGATCT-CTTGGACAAAATGTTC 2847 || ||| |||||||| | | || | |||||||||| |||| || ||||||||| ||| Sbjct 1792 GA-GGATGAAGATCCCAAAG-TGTTGGTTCATTTCAGGAATCTTCT-GGACAAAATTTTC 1848 Query 2848 ATC-CTTGATCC-CGAGAGGAGACTGACTGTGTCACAGGCATTAGCTCACCCATTCATCA 2905 | | |||||||| | | || ||||| || ||||||||||||||||||||||||||||||| Sbjct 1849 A-CACTTGATCCTCAAAAG-AGACTTACAGTGTCACAGGCATTAGCTCACCCATTCATCA 1906 Query 2906 CTGGCAAGTGA 2916 | ||||| ||| Sbjct 1907 CGGGCAAATGA 1917 > Ahg928493 jgi|Araly1|928493|scaffold_300950.1 Length=342 Score = 124 bits (67), Expect = 3e-27 Identities = 96/109 (88%), Gaps = 5/109 (5%) Strand=Plus/Plus Query 2576 CTGGCGCCACAAACAATGATATGTTAC-GCCTTCATATGGAACTGAAAGGTCCCTTC-CC 2633 ||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||| || Sbjct 168 CTGGCTCCACAAACAATGATATGTT-CTGCCTTCATATGGAACTGAAAGGTCCCTTCTCC 226 Query 2634 TAAAAAGATGCTTCGCAAGGGAGCATTTATTGATCAGCACTTTGATCAT 2682 || ||||||||| ||||||||| | |||| |||||| |||| || ||| Sbjct 227 -AAGAAGATGCTTTGCAAGGGAGTAGTTATCGATCAGGACTT-GAGCAT 273 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 128900999751 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5