BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G27170.1 Length=2750 Score E Sequences producing significant alignments: (Bits) Value Ahg484500 jgi|Araly1|484500|fgenesh2_kg.5__492__AT3G27170.1 4318 0.0 Ahg493886 jgi|Araly1|493886|fgenesh2_kg.7__3319__AT5G40890.1 1934 0.0 Ahg930004 jgi|Araly1|930004|scaffold_302461.1 455 8e-127 > Ahg484500 jgi|Araly1|484500|fgenesh2_kg.5__492__AT3G27170.1 Length=2715 Score = 4318 bits (2338), Expect = 0.0 Identities = 2600/2726 (95%), Gaps = 19/2726 (1%) Strand=Plus/Plus Query 15 CCACCAAGAAGTGCTTTGTTAACAGAGAAAGCTCTGTAAGAACCTTAAAAAGGTTCTGTT 74 ||||| ||||||| ||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct 1 CCACCCAGAAGTGGTTTGTTAACAGAGAAAGCTCTATAAGAACCTTAAAAA-GTTCTGTT 59 Query 75 GCAGAGGTTCCGACCAAAAGCCAGAGTTTCATCTTTATGTGAACAAAGACAGAGAGATGG 134 |||||||||||||||||||||||||||||||||||||||||| || |||| |||||||| Sbjct 60 GCAGAGGTTCCGACCAAAAGCCAGAGTTTCATCTTTATGTGATCAGAGAC--AGAGATGG 117 Query 135 TGGAAGAAGATTTAAACCAGATTGGTGGTAATAGTAATTACAATGGAGAAGGAGGCGACC 194 |||||||||||||||||||||||||||| |||||||||||||||||||||| | |||| Sbjct 118 TGGAAGAAGATTTAAACCAGATTGGTGGCAATAGTAATTACAATGGAGAAGCA---GACC 174 Query 195 CAGAGAGCAACACACTTAACCAACCTCTAGTTAAGGCTAATCGAACACTTTCTTCAACTC 254 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 175 CAGAGAGCAACACACTTAACCAACCTCTGGTTAAGGCTAATCGAACACTTTCTTCAACTC 234 Query 255 CACTTGCTTTGGTTGGTGCCAAAGTTTCCCATATCGAAAGCTTGGACTATGAAATAAACG 314 | ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 235 CTCTTGCCTTGGTTGGTGCCAAGGTTTCCCATATCGAAAGCTTGGACTATGAAATAAACG 294 Query 315 AGAACGATCTGTTTAAGCATGATTGGAGAAAAAGATCAAAGGCACAAGTACTTCAATACG 374 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 295 AAAACGATCTGTTTAAGCATGATTGGAGAAAAAGATCAAAGGCACAAGTACTTCAATACG 354 Query 375 TGTTCTTGAAATGGACGTTAGCTTGTCTTGTTGGTCTTTTCACTGGTTTAATCGCTACTC 434 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 355 TGTTCCTGAAATGGACGTTAGCTTGTCTTGTTGGTCTTTTCACTGGTTTAATCGCTACTC 414 Query 435 TCATCAACTTAGCTGTTGAAAACATCGCCGGCTATAAGCTTTTAGCCGTTGGTCACTTCC 494 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 415 TCATCAACTTAGCTGTTGAAAACATCGCCGGCTACAAGCTTTTAGCCGTTGGTCACTTCC 474 Query 495 TCACTCAAGAAAGATATGTTACAGGTCTGATGGTGCTTGTTGGGGCGAATTTGGGACTGA 554 |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 475 TCACCCAAGAAAGATATGTTACAGGTCTGATGGTGCTTGCTGGGGCGAATTTGGGACTGA 534 Query 555 CGTTGGTGGCGTCTGTGCTTTGTGTGTGCTTTGCTCCTACGGCGGCTGGACCTGGAATCC 614 ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| | Sbjct 535 CGTTGGTGGCGTCTGTGCTTTGTGTTTGCTTTGCTCCTACCGCGGCTGGACCTGGAATTC 594 Query 615 CTGAGATCAAAGCTTATCTTAATGGTGTAGATACTCCCAACATGTTTGGTGCTACTACTA 674 ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct 595 CTGAGATCAAAGCTTATCTTAATGGCGTTGATACTCCCAACATGTTTGGTGCTACTACTA 654 Query 675 TGATCGTTAAGATTGTTGGAAGCATTGGAGCGGTTGCAGCTGGACTTGATCTAGGTAAAG 734 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 655 TGATCGTTAAGATTGTTGGAAGCATTGGAGCGGTTGCAGCTGGACTTGATCTGGGTAAAG 714 Query 735 AGGGTCCTCTAGTTCACATTGGAAGCTGCATAGCTTCTTTGCTTGGACAAGGTGGAACAG 794 |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 715 AGGGTCCTCTGGTTCACATTGGAAGCTGCATAGCTTCTTTGCTTGGACAAGGCGGAACAG 774 Query 795 ACAACCACCGTATCAAGTGGCGGTGGCTTCGTTACTTCAACAACGATAGAGACCGCAGGG 854 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 775 ACAACCACCGTATCAAGTGGCGATGGCTTCGTTACTTCAACAACGATAGAGACCGCAGGG 834 Query 855 ATCTGATTACATGTGGCTCAGCTGCAGGAGTGTGTGCAGCCTTCAGGTCACCTGTTGGAG 914 |||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||| Sbjct 835 ATCTGATTACATGTGGTTCAGCTGCTGGAGTCTGTGCAGCCTTCAGGTCACCTGTTGGAG 894 Query 915 GTGTACTTTTCGCCCTCGAGGAAGTTGCTACTTGGTGGAGAAGTGCCTTATTGTGGCGGA 974 |||| ||||||||||| |||||||| || |||||||||||||| |||||||||||||||| Sbjct 895 GTGTGCTTTTCGCCCTTGAGGAAGTGGCCACTTGGTGGAGAAGCGCCTTATTGTGGCGGA 954 Query 975 CTTTCTTCAGCACAGCGGTTGTTGTGGTTGTTCTAAGAGAGTTCATAGAGATCTGCAATT 1034 |||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct 955 CTTTCTTCAGTACAGCGGTCGTTGTGGTGGTTCTAAGAGAGTTCATAGAGATCTGCAATT 1014 Query 1035 CAGGGAAGTGTGGGTTGTTTGGAAAAGGAGGGCTAATCATGTTTGATGTGAGTCATGTAA 1094 ||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||| Sbjct 1015 CAGGGAAGTGTGGGTTGTTTGGAAAAGGAGGTCTTATCATGTTTGATGTGAGTCACGTAA 1074 Query 1095 CTTATACTTACCATGTAACTGATATAATCCCTGTCATGTTGATTGGTGTAATCGGTGGAA 1154 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1075 CTTATACTTACCATGTAACTGACATAATCCCTGTCATGTTGATTGGTGTAATCGGTGGAA 1134 Query 1155 TTCTTGGGAGCCTGTACAATCATCTT-CTGCATAAAGTTCTCAGGCTTTACAATCTCATC 1213 ||||||||||||| || ||||| ||| ||||||||||||||| ||||||||||||||||| Sbjct 1135 TTCTTGGGAGCCTCTATAATCA-CTTCCTGCATAAAGTTCTCCGGCTTTACAATCTCATC 1193 Query 1214 AATGAGAAGGGTAAGATCCATAAGGTGCTTCTCAGTCTTACAGTATCACTCTTTACATCT 1273 || ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct 1194 AACGAGAAGGGTAAGATCCACAAGGTGCTTCTCAGTCTTACAGTATCACTCTTCACATCG 1253 Query 1274 GTTTGCCTTTATGGCCTTCCTTTCTTAGCGAAATGCAAGCCTTGTGACCCCTCGATAGAT 1333 ||||||||||| || ||||||||| | ||||||||||||||||||||||||||||||||| Sbjct 1254 GTTTGCCTTTACGGTCTTCCTTTCCTCGCGAAATGCAAGCCTTGTGACCCCTCGATAGAT 1313 Query 1334 GAGATATGCCCGACGAATGGAAGATCGGGTAACTTCAAACAGTTCCATTGCCCTAAAGGT 1393 ||||| |||||||| |||||||||||||| ||||||||||||||| | ||||| |||||| Sbjct 1314 GAGATCTGCCCGACCAATGGAAGATCGGGAAACTTCAAACAGTTCAACTGCCCAAAAGGT 1373 Query 1394 TACTACAATGATCTAGCTACTCTGCTTCTCACCACCAACGATGATGCTGTCAGAAACCTT 1453 |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1374 TACTACAATGATTTAGCTACTCTGCTTCTCACCACCAACGATGACGCTGTCAGAAACCTT 1433 Query 1454 TTCTCTTCCAACACTCCCAATGAGTTTGGTATGGGTTCCCTTTGGATATTCTTTGTGCTA 1513 |||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||| Sbjct 1434 TTCTCTTCCAACACCCCCAATGAGTTTGGCATGGGTTCCCTGTGGATATTCTTTGTGCTC 1493 Query 1514 TACTGCATCTTGGGGCTTTTCACATTTGGTATTGCAACACCGTCTGGTCTCTTCCTCCCC 1573 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| Sbjct 1494 TACTGCATCTTGGGGCTTTTCACATTTGGAATTGCAACACCGTCTGGTCTCTTCCTTCCC 1553 Query 1574 ATCATCCTCATGGGTGCTGCATATGGCCGAATGCTTGGCGCTGCAATGGGATCATACACA 1633 |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct 1554 ATCATCCTCATGGGTGCTGCATATGGCCGAATGCTTGGCGCTGCGATGGGATCCTACACA 1613 Query 1634 AGTATTGACCAAGGGCTTTATGCTGTCCTTGGTGCAGCTGCACTCATGGCTGGATCGATG 1693 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1614 AGTATTGACCAAGGGCTTTATGCTGTCCTTGGTGCAGCTGCACTCATGGCTGGATCGATG 1673 Query 1694 AGAATGACTGTGTCACTCTGTGTTATATTCCTTGAACTCACCAACAACCTTCTTTTGCTT 1753 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1674 AGAATGACTGTGTCACTCTGTGTTATATTCCTCGAACTCACCAACAACCTTCTTTTGCTT 1733 Query 1754 CCTATAACGATGATCGTGCTTCTGATAGCCAAAACTGTGGGAGACAGCTTTAACCCGAGT 1813 || || || ||||| ||||||||||| ||||||||||||||||||||||| ||||| ||| Sbjct 1734 CCCATTACAATGATTGTGCTTCTGATTGCCAAAACTGTGGGAGACAGCTTCAACCCAAGT 1793 Query 1814 ATATATGACATCATCTTGCATCTAAAGGGCTTACCTTTCTTAGAAGCAAATCCAGAGCCG 1873 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1794 ATCTATGACATCATCTTGCATCTAAAGGGCTTACCTTTCTTAGAAGCAAATCCAGAGCCG 1853 Query 1874 TGGATGAGGAACCTCACCGTTGGTGAGCTTGGTGATGCTAAGCCCCCGGTTGTAACCCTG 1933 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1854 TGGATGAGGAACCTCAGTGTTGGTGAGCTTGGTGATGCTAAGCCCCCGGTTGTAACCCTG 1913 Query 1934 CAAGGTGTTGAAAAGGTTTCAAATATAGTTGATGTGCTAAAGAACACGACGCATAATGCA 1993 ||||| || |||||||||||||| |||||||||||||||||||||||||| ||||||||| Sbjct 1914 CAAGGCGTAGAAAAGGTTTCAAAAATAGTTGATGTGCTAAAGAACACGACCCATAATGCA 1973 Query 1994 TTCCCTGTTTTAGATGAAGCAGAAGTACCTCAAGTGGGTCTAGCAACTGGGGCTACAGAA 2053 ||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||| Sbjct 1974 TTCCCTGTTTTAGATAAAGCAGAAGTACCTCAAGTGGGTCTACCAACTGGTGCTACAGAA 2033 Query 2054 CTCCACGGGTTGATCTTGAGAGCGCACCTCGTTAAAGTTCTGAAAAAGAGATGGTTCTTG 2113 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 2034 CTCCACGGGTTGATCCTGAGAGCGCACCTCGTTAAAGTTCTGAAAAAGAGATGGTTCTTG 2093 Query 2114 ACAGAGAAAAGAAGAACAGAGGAGTGGGAGGTCAGAGAAAAGTTTCCATGGGATGAATTG 2173 |||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||| Sbjct 2094 ACAGAGAAAAGAAGAACAGAAGAGTGGGAGGTCAGGGAGAAGTTTCCATGGGATGAATTG 2153 Query 2174 GCTGAAAGAGAAGACAACTTTGACGACGTGGCCATCACAAGCGCTGAAATGGAAATGTAT 2233 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2154 GCTGAGAGAGAAGACAACTTTGACGACGTGGCCATCACAAGCGCTGAAATGGAAATGTAT 2213 Query 2234 GTCGATCTTCATCCTCTCACCAACACAACACCTTACACAGTCATGGAGAACATGTCAGTG 2293 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct 2214 GTCGATCTTCATCCTCTTACCAACACAACACCTTACACAGTCATGGAGAACATGTCTGTG 2273 Query 2294 GCCAAGGCTTTAGTACTTTTCCGGCAAGTGGGACTCCGGCATTTGCTTATTGTTCCCAAG 2353 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 2274 GCCAAGGCTTTAGTACTATTCCGGCAAGTGGGACTCCGGCATTTGCTTATTGTTCCCAAG 2333 Query 2354 ATTCAAGCCTCAGGAATGTGTCCTGTGGTAGGGATCTTAACCAGACAGGACCTAAGGGCA 2413 ||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct 2334 ATTCAAGCCTCGGGAATGTGTCCTGTGGTAGGGATCTTAACCAGGCAGGATCTAAGGGCA 2393 Query 2414 TACAACATTCTACAAGCCTTTCCTCTCTTGGAAAAATCCAAAGGTGGAAA-GACACATTG 2472 |||||||||||||||||||||||||| ||||||||||||||| ||||||| | ||||||| Sbjct 2394 TACAACATTCTACAAGCCTTTCCTCTATTGGAAAAATCCAAAAGTGGAAAAG-CACATTG 2452 Query 2473 AAAGAGCTACTTGCTT-GTTGTAAGAA-ATCGCTTGCAGCCTTGTGTTTTTCTTCTCATT 2530 || ||||||||| ||| ||||||| || |||||||||||||||||||||||||||||||| Sbjct 2453 AA-GAGCTACTTACTTTGTTGTAA-AATATCGCTTGCAGCCTTGTGTTTTTCTTCTCATT 2510 Query 2531 CTTAAAGATGTATCTGTCCAGTTTTGCACTTTTTCTTCATATCCAACAGAAGTTGATAAG 2590 ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 2511 CTTGAAGATGTATCTGTCCAGTTTTGCACTTCTTCTTCATATCCAACAGAAGTTGATAAG 2570 Query 2591 ATAAATATTGCAATGACACAAAAA-GAGAGA-CTCATATCTCCTTATCAACAGGAACAGA 2648 |||||||||||||||||||||||| |||||| | |||||| | ||||||||||||||||| Sbjct 2571 ATAAATATTGCAATGACACAAAAAAGAGAGAAC-CATATCGCGTTATCAACAGGAACAGA 2629 Query 2649 GCAAAACTGTTT-C-CATCTATTAGATGGTCTCCTAAACCTCTGAAGTTCAAGTGTTACA 2706 |||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||| Sbjct 2630 GCAAAACTGTTTTCTCATCTATTAGATGGTCTCCTAAACTTCTGAAGTTCAAGTGTTACA 2689 Query 2707 GACATTAACTAATAAGAGTCCTGTGA 2732 ||||||||||||| ||| || ||||| Sbjct 2690 GACATTAACTAATGAGATTCTTGTGA 2715 > Ahg493886 jgi|Araly1|493886|fgenesh2_kg.7__3319__AT5G40890.1 Length=2890 Score = 1934 bits (1047), Expect = 0.0 Identities = 1903/2312 (82%), Gaps = 76/2312 (3%) Strand=Plus/Plus Query 181 AGAAGGAGGCGACCCAGAGAGCAACACACTT-AACCAACCTCTAGTTAAGGCTA-ATCGA 238 ||||| ||| || ||||||| |||||| || ||||||||||| |||| | | || || Sbjct 358 AGAAGAAGGAGATCCAGAGAACAACAC-TTTGAACCAACCTCTCCTTAA-GAGACATAGA 415 Query 239 ACACTTTCTTCAACTCCACTTGCTTTGGTTGGTGCCAAAGTTTCCCATATCGAAAGCTTG 298 || |||||||||||||| ||||||||||| |||||||| ||||| || ||||| || || Sbjct 416 ACTCTTTCTTCAACTCCTCTTGCTTTGGTCGGTGCCAAGGTTTCACACATCGAGAGTTTA 475 Query 299 GACTATGAAATAAACGAGAACGATCTGTTTAAGCATGATTGGAGAAAAAGATCAAAGGCA 358 || ||||||||||| ||||| |||||||| |||||||| ||||||| |||||||| || Sbjct 476 GATTATGAAATAAATGAGAATGATCTGTTCAAGCATGACTGGAGAAGCAGATCAAAAACA 535 Query 359 CAAGTACTTCAATACGT-GTTCTTGAAATGGACGTTAGCTTGTCTTGTTGGTCTTTTCAC 417 ||||| |||||||| | ||| | |||||||| |||||||||||||||||||| ||||| Sbjct 536 CAAGTGTTTCAATACATATTTC-TAAAATGGACATTAGCTTGTCTTGTTGGTCTCTTCAC 594 Query 418 TGGT-TTAATCGCTACTCTCATCAACTTAGCTGTTGAAAACATCGCCGGCTATAAGCTTT 476 |||| || |||||||||||||||||| | ||| | |||||||||||||| || || ||| Sbjct 595 TGGTCTT-ATCGCTACTCTCATCAACCTCGCTATCGAAAACATCGCCGGTTACAAACTTC 653 Query 477 TAGCCGTTGGTC-ACTTCCTCACTCAAGA-AAGATATGTTACAGGTCTGATGGTGC-TTG 533 | ||||| || | ||| | || |||||| | | | || |||||||||||| | | || Sbjct 654 TCGCCGTAGG-CTACTACATCGGTCAAGATAGGTTTTG-GACAGGTCTGATGAT-CTTTA 710 Query 534 TTGGGGCGAATTTGGGACTGACGTTGGTGGCGTCTGTGCTTTG-TGTGTGCTTTGCTCCT 592 ||||| |||||||| ||||| ||||||||| | || | ||| ||| | |||||||||| Sbjct 711 CGGGGGCAAATTTGGGTCTGACTTTGGTGGCGACAGTAC-TTGTTGTTTACTTTGCTCCT 769 Query 593 ACGGCGGCTGGACCTGGAATCCCTGAGATCAAAGCTTATCTTAATGGTGTAGATACTCCC 652 ||||| ||||| || ||||| |||||||| ||||||||||||||||| | || |||||| Sbjct 770 ACGGCCGCTGGTCCCGGAATTCCTGAGATTAAAGCTTATCTTAATGGCATTGACACTCCC 829 Query 653 AACATGTTTGGTGCTACTACTATGATCGTTAAGATTGTTGGAAGCATTGGAGCGGTTGCA 712 || ||||||||| ||| || ||||| ||||||||||||||||| ||||||||||||||| Sbjct 830 AATATGTTTGGTTTTACCACCATGATGGTTAAGATTGTTGGAAGTATTGGAGCGGTTGCA 889 Query 713 GCTGGACTTGATCTAGGTAAAG-AGGGTCCTCTAGTTCACATTGGAAGCTGCATAGCTTC 771 |||||||||||||| ||||||| |||| ||| | ||||| |||||||||||||| ||||| Sbjct 890 GCTGGACTTGATCTTGGTAAAGAAGGG-CCTTTGGTTCATATTGGAAGCTGCATTGCTTC 948 Query 772 TTTGCTTGGACAAGGTGGAACAGACAACCACCGTATCAAGTGGCGGTGGCTTCGTTACTT 831 ||||||||| |||||||| |||| || ||| | ||||||||| | |||||||||||||| Sbjct 949 TTTGCTTGGTCAAGGTGGTCCAGATAATCACAGAATCAAGTGGAGATGGCTTCGTTACTT 1008 Query 832 CAACAACGATAGAGACCGCAGGGATCTGATTACATGTGGCTCAG-CTGCAGGAGTGTGTG 890 ||||||||||||||| || || ||||| ||||| ||||| || | || | ||||| |||| Sbjct 1009 CAACAACGATAGAGATCGAAGAGATCTTATTACCTGTGGATCTGCCT-CTGGAGTATGTG 1067 Query 891 CAGCCTTCAGGTCACCTGTTGGAGGTGTACTTTTCGCCCTCGAGGAAGTTGCTACTTGGT 950 |||| ||||||||||| || ||||| || |||||||| || |||||||||||||| |||| Sbjct 1068 CAGCTTTCAGGTCACCAGTAGGAGGAGTGCTTTTCGCACTTGAGGAAGTTGCTACGTGGT 1127 Query 951 GGAGAAGTGCCT-TATTGTGGCGGACTTTCTTCAGCACAGCGGTTGTTGTGGTTGTTCTA 1009 ||||||||| || | |||||| |||| |||||||| ||||| ||||| |||||||| || Sbjct 1128 GGAGAAGTG-CTCTCTTGTGGAGGACATTCTTCAGTACAGCCGTTGTGGTGGTTGTACTG 1186 Query 1010 AGAG-AGTTCATAGAGATCTGCAATTCAGGGAAGTGTGGG-TTGTTTGGAAAAGGAGGGC 1067 |||| | ||||| || || || ||||| ||||| || ||| || || || |||||| | Sbjct 1187 AGAGCA-TTCATTGAAATTTGTAATTCCGGGAAATGCGGGCTT-TTCGGCTCAGGAGGAC 1244 Query 1068 TAATCATGTTTGATGTGAGTCATGTA-ACTTATACTTACCATGTAACTGATATAATCCCT 1126 | || ||||||||||| ||||||||| | | || ||||| | | ||||||||||||| Sbjct 1245 TCATTATGTTTGATGTAAGTCATGTAGAGGT-TAGGTACCACGCAGCTGATATAATCCCG 1303 Query 1127 GTCATGTTGATTGGTGTAATCGGTGGAATTCTTGGGAGCCTGTACAATCATCTTCTGCAT 1186 |||| ||||||| || | ||||| |||||||| ||| |||||||||||||| ||||| Sbjct 1304 GTCACACTGATTGGAGTCTTTGGTGGCATTCTTGGAAGCTTGTACAATCATCTTTTGCAT 1363 Query 1187 AAAGTTCTCAGGCTTTACAATCTCATCAATGAGAAGGGTAAGATCCATAAGGTGCTTCTC 1246 ||||||||| |||||||||||||||||||| ||||||||||||| || ||||||||||| Sbjct 1364 AAAGTTCTCCGGCTTTACAATCTCATCAATCAGAAGGGTAAGATTCACAAGGTGCTTCTA 1423 Query 1247 AGTCTTACAGTATCACTCTTTACATCTGTTTGCCTT-TATGGCCTTCCTTTCTTAGCGAA 1305 |||||| ||||| || ||||| || ||||| ||| || || ||||||||||| ||| | Sbjct 1424 AGTCTTGGGGTATCTCTATTTACCTCGGTTTG-CTTGTACGGTCTTCCTTTCTTGGCGGA 1482 Query 1306 ATGCAAGCCTTGTGACCCCTCGATAGATGAGATATGCCCGACGAATGGAAGATCGGGTAA 1365 ||||||||||||| | || |||||||| ||||| || || || ||||||||||| || || Sbjct 1483 ATGCAAGCCTTGTAATCCTTCGATAGACGAGATGTGTCCAACAAATGGAAGATCAGGAAA 1542 Query 1366 CTTCAAACAGTTCCATTGCCCTAAA-GGTTACTACAATGATCTAGCTACTCTGCTTCTCA 1424 |||||| || ||| | || || ||| ||||| ||||| |||||||||||||||||||||| Sbjct 1543 CTTCAAGCAATTCAACTGTCC-AAATGGTTATTACAACGATCTAGCTACTCTGCTTCTCA 1601 Query 1425 CCACCAACGATGATGCTGTCAGAAACCTTTTCTCTTCCAACACTCCCAATGAGTTTGGTA 1484 | ||||| |||||||| ||||||||| |||||||||| |||||||| ||||||||||||| Sbjct 1602 CAACCAATGATGATGCAGTCAGAAACATTTTCTCTTCAAACACTCCTAATGAGTTTGGTA 1661 Query 1485 TGGGTTCCCTTTGGATATTCTTTGTG-CTATACTGCATCTTGGGGCTTTTCACATTTGGT 1543 ||| ||| || ||||||||||||| | || |||||||| ||||| ||| ||||||| ||| Sbjct 1662 TGGTTTCTCTCTGGATATTCTTTG-GCCTCTACTGCATTTTGGGTCTTATCACATTCGGT 1720 Query 1544 ATTGCAACACCGTCTGGTCTCTTCCTCCCCATCATCCTCATGGGTGCTGCATATGGCCGA 1603 || || ||||| || ||||||||||| || || |||||||||||| ||||||| || || Sbjct 1721 ATAGCGACACCATCGGGTCTCTTCCTACCGATTATCCTCATGGGTTCTGCATACGGTCGG 1780 Query 1604 ATGCTTGGCGCTGCAATGGGATCATACACAAGTATTGACCAAGGGCTTTATGCTGTCCTT 1663 ||||| ||| | ||||||||||| ||||||| || || ||||||||||| || || ||| Sbjct 1781 ATGCTAGGCACAGCAATGGGATCTTACACAAACATAGATCAAGGGCTTTACGCGGTTCTT 1840 Query 1664 GGTGCAGCTGCACTCATGGCTGGATCGATGAGAATGACTGTGTCACTCTGTGTTATATTC 1723 ||||||||| ||||||||||||| || ||||||||||| || |||||||||||||||||| Sbjct 1841 GGTGCAGCTTCACTCATGGCTGGTTCAATGAGAATGACAGTTTCACTCTGTGTTATATTC 1900 Query 1724 CTTGAACTCACCAACAACCTTCTTTTGCTT-CCTATAACGATGATCGTGCTTCTGATAGC 1782 ||||||||||||||||||||||||||| || || || || ||| | |||||||||||||| Sbjct 1901 CTTGAACTCACCAACAACCTTCTTTTG-TTACCCATTACAATGTTTGTGCTTCTGATAGC 1959 Query 1783 CAAAACTGTGGGAGACAGCTTTAACCCGAGTATATATGACATCAT-CTTGCATCTAAAGG 1841 ||||| || ||||||||||| || | ||||| || || ||||| || |||||||||| Sbjct 1960 TAAAACAGTTGGAGACAGCTTCAATCTAAGTATCTACGAGATCATTCTC-CATCTAAAGG 2018 Query 1842 GCTTACCTTTCTTAGAAGCAAATCCAGAGCCGTGGATGAGGAACCTCACCGTTGGTGAGC 1901 ||||||| ||||| ||||||||||||||||| ||||||||||| ||||| || ||||||| Sbjct 2019 GCTTACCGTTCTTGGAAGCAAATCCAGAGCCATGGATGAGGAATCTCACTGTAGGTGAGC 2078 Query 1902 TTGGTGATGCTAAGCCCCCGGTTGTAACCCTGCAA-GGTGTTGA-AAAGGTTTCAAATAT 1959 || || |||||||| ||||||||||| || || || || || |||| | | ||||| Sbjct 2079 TTAACGACGCTAAGCCTCCGGTTGTAACACTT-AACGGAGTAGAGAAAG-TCGCGAATAT 2136 Query 1960 AGTTGATGTGCTAAAGAACACGACGCATAATGCATTCCCTGTTTTAGATG-AAGCAGAAG 2018 ||| ||||| |||| |||||| |||||||| |||||||| || || |||| || |||| Sbjct 2137 AGTCGATGTACTAAGGAACACAACGCATAACGCATTCCCAGTCTTGGATGGAA-CAGA-- 2193 Query 2019 TACCTCAAGTGGGTCTAGCAACTGGGGCTACAGAACTCCACGGGT-TGATCTTGAGAGCG 2077 | | || | || |||| |||||| ||||| || | ||||| | ||||| Sbjct 2194 T-CA--AA------C---CA-CTGG---TACAGAGCTCCATGG-TCTGATCCTAAGAGCT 2236 Query 2078 CACCTCGTTAAAGTTCTGAAAAAGAGATGGTTCTTGACA-GAGAAAAGAAGAACAGAGGA 2136 ||||| || |||||||||||||||||||||||||||| | |||||||| |||||||| || Sbjct 2237 CACCTTGTGAAAGTTCTGAAAAAGAGATGGTTCTTGA-ATGAGAAAAGGAGAACAGAAGA 2295 Query 2137 GTGGGAGGT-CAGAGAAAAGTTTC-CATGGGATGAATTGGCTGAAAGAGAAGACAACTTT 2194 ||||| || | | |||||||| | || || |||||| ||||| |||||||| || ||| Sbjct 2296 ATGGGAAGTTCGG-GAAAAGTT-CACACCGGTTGAATTAGCTGAGAGAGAAGATAA-TTT 2352 Query 2195 -GACGACGTGGCCATCACAAGCGCTGAAATGGAAATGTATGTCGATCTTCATCCTCTCAC 2253 ||||| || || || | |||| | || ||| || ||||||| |||||||||||| | || Sbjct 2353 CGACGATGTTGCAATTATAAGCTCAGAGATGCAATTGTATGTTGATCTTCATCCTTTGAC 2412 Query 2254 CAACACAACACCTTACACAGTCATGGAGAACATGTCAGTGGCCAAGGCTTTAGTACTTTT 2313 |||||| |||||||||||||| || ||| ||||||||||| || ||||| || || || Sbjct 2413 CAACACTACACCTTACACAGTGGTGCAGAGTATGTCAGTGGCTAAAGCTTTGGTGCTGTT 2472 Query 2314 CCGG-CAAGTGGGACTCCGGCATTTGCTTATTGTTCCCAAGATTCAAGCCTCAGGAATGT 2372 |||| || ||||| ||| | |||||||| ||||||||||||||||||| ||||| |||| Sbjct 2473 CCGGTCA-GTGGGTCTCAGACATTTGCTGGTTGTTCCCAAGATTCAAGCTTCAGGGATGT 2531 Query 2373 GTCCTGTGGTAGGGATCTTAACCAGACAGGACCTAAGGGCATACAACATTCTACAAGCCT 2432 |||||| ||||||||||||| || || || |||||||| || |||||||||||||| | Sbjct 2532 CACCTGTGATAGGGATCTTAACAAGGCAAGATCTAAGGGCTTATAACATTCTACAAGCAT 2591 Query 2433 TTCCTCTCTTGGAAAAATC-CAAAGGTGGAAA 2463 |||||| |||||| ||| | |||| ||||||| Sbjct 2592 TTCCTCACTTGGATAAA-CACAAAAGTGGAAA 2622 > Ahg930004 jgi|Araly1|930004|scaffold_302461.1 Length=406 Score = 455 bits (246), Expect = 8e-127 Identities = 269/280 (96%), Gaps = 1/280 (0%) Strand=Plus/Plus Query 307 AATAAACGAGAACGATCTGTTTAAGCATGATTGGAGAAAAAGATCAAAGGCACAAGTACT 366 ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct 95 AATAAACGAAAACGATCTGTTTAAGCACGATTGGAGAAAAAGATCAAAGGCACAAGTGCT 154 Query 367 TCAATACGTGTTCTTGAAATGGACGTTAGCTTGTCTTGTTGGTCTTTTCACTGGTTTAAT 426 ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 155 TCAATACGTCTTCCTGAAATGGACGTTAGCTTGTCTTGTTGGTCTTTTCACTGGTTTAAT 214 Query 427 CGCTACTCTCATCAACTTAGCTGTTGAAAACATCGCCGGCTATAAGCTTTTAGCCGTTGG 486 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 215 CGCTACTCTCATCAACTTAGCTGTTGAAAACATCGCCGGCTACAAGCTTTTAGCCGTTGG 274 Query 487 TCACTTCCTCACTCAAGAAAGATATGTTACAGGTCTGATGGTGCTTGTTGGGGCGAATTT 546 |||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct 275 TCACTTTCTCACTCAAGAAAGATATGTTACAGGTCTGATGGTGCTTGCTGGGGCCAATTT 334 Query 547 GGGACTGACGTTGGTGGCGTCTGTGCTTTGTGTGTG-CTT 585 ||||||||||||||||||||||||||||||||| || ||| Sbjct 335 GGGACTGACGTTGGTGGCGTCTGTGCTTTGTGTTTGGCTT 374 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 103757827380 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5