BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G27430.2
Length=1230
Score E
Sequences producing significant alignments: (Bits) Value
Ahg936501 jgi|Araly1|936501|scaffold_500692.1 1415 0.0
Ahg475769 jgi|Araly1|475769|fgenesh2_kg.2__899__AT3G27430.2 1258 0.0
Ahg887559 jgi|Araly1|887559|Al_scaffold_0398_1 1243 0.0
Ahg908190 jgi|Araly1|908190|Al_scaffold_0002_1271 1232 0.0
Ahg493925 jgi|Araly1|493925|fgenesh2_kg.7__3358__AT5G40580.2 1003 0.0
Ahg936454 jgi|Araly1|936454|scaffold_500645.1 110 3e-23
> Ahg936501 jgi|Araly1|936501|scaffold_500692.1
Length=865
Score = 1415 bits (766), Expect = 0.0
Identities = 821/848 (97%), Gaps = 2/848 (0%)
Strand=Plus/Plus
Query 105 GTCAATTTGAAAAAATGTCGCAATCAACCGTAGATGTTCCGCCAAAGGGTGGGTTTAGCT 164
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 7 GTCAATTTGAAAAAATGTCGCAATCAGCCGTAGATGTTCCGCCAAAGGGTGGGTTTAGCT 66
Query 165 TCGATCTGTGTAAGAGAAATGATATGCTTACACAAAAGGGTCTTAAAGCTCCGTCTTTTT 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 67 TCGATCTGTGTAAGAGAAATGATATGCTTACACAAAAGGGTCTTAAAGCTCCGTCTTTTT 126
Query 225 TGAAGACTGGAACAACCATTGTTGGTTTGATTTTCAAGGATGGTGTGATACTAGGGGCAG 284
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct 127 TGAAGACTGGAACAACCATCGTTGGTTTGATTTTCAAGGATGGTGTGATACTAGGGGCGG 186
Query 285 ATACCCGAGCAACTGAGGGGCCAATTGTTGCTGATAAGAACTGTGAGAAGATTCACTATA 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 187 ATACCCGAGCAACTGAGGGGCCAATTGTTGCTGATAAGAACTGTGAGAAGATTCACTATA 246
Query 345 TGGCACCAAACATATATTGCTGTGGTGCAGGAACTGCGGCTGATACTGAAGCAGTCACTG 404
||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||
Sbjct 247 TGGCACCAAACATTTATTGCTGTGGTGCAGGAACTGCGGCCGACACTGAAGCAGTCACTG 306
Query 405 ATATGGTCAGCTCACAGCTGCGATTGCATCGTTACCAGACTGGTCGAGACTCTCGGGTCA 464
|||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct 307 ATATGGTCAGCTCACAGCTGCGGTTGCATCGTTACCAGACTGGTCGTGACTCTCGGGTCA 366
Query 465 TTACTGCTTTGACCCTTCTCAAAAAACATCTTTTCAGCTACCAAGGTCATGTCTCTGCTG 524
||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct 367 TTACTGCTTTGACCCTTCTCAAAAAACATCTATTCAGCTATCAAGGTCATGTCTCTGCTG 426
Query 525 CTCTTGTACTCGGTGGAGTTGATATCACTGGTCCACATCTGCATACTATATACCCACACG 584
||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct 427 CTCTTGTGCTCGGTGGAGTTGATATCACTGGCCCTCATCTGCATACTATATACCCACACG 486
Query 585 GTTCAACTGACACTCTTCCATTCGCCACAATGGGTTCGGGTTCTCTTGCTGCTATGTCTG 644
||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct 487 GTTCAACTGACACTCTTCCATTCGCTACAATGGGTTCTGGTTCTCTTGCTGCTATGTCTG 546
Query 645 TGTTTGAGGCAAAGTATAAAGAAGGCCTAACTAGGGATGAAGGAATTAAGCTGGTCGCTG 704
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 547 TGTTTGAGGCAAAGTATAAAGAAGGGCTAACTAGGGATGAAGGAATTAAGCTGGTCGCTG 606
Query 705 AATCCATATGCTCGGGTATATTCAATGACCTGGGTAGTGGTAGCAACGTGGACATCTGCG 764
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 607 AAGCCATATGCTCGGGTATATTCAATGACCTGGGTAGTGGTAGCAACGTGGACATCTGCG 666
Query 765 TGATCACAAAGGGGAACAAGGAATATCTCAGGAACTACATGGAACCAAACCCAAGAACCT 824
||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct 667 TGATCACTAAGGGGAACAAAGAATATCTGAGGAACTACATGGAACCAAACCCAAGAACCT 726
Query 825 ATGTCAGCAGCAAAGGCTATTCCTTCACCAAGAAAACTGAGGTTCTTCTCACCAAAATCA 884
||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct 727 ATGTCAGCAGCAAAGGCTATTCCTTCACCAAGAAAACCGAGGTTCTTCTTACCAAAATCA 786
Query 885 CCCCATTGCTGGAGCGAGTCGAAATCACAGAAGTTGGTGAAGCTATGGAGGAAT-AATTC 943
|||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||| |
Sbjct 787 CCCCATTGCTGGAGCGAGTCGAGATCACAGAAGTCGGTGAAGCTATGGAGGAATGAAT-C 845
Query 944 AATCAATC 951
||| ||||
Sbjct 846 AATAAATC 853
> Ahg475769 jgi|Araly1|475769|fgenesh2_kg.2__899__AT3G27430.2
Length=872
Score = 1258 bits (681), Expect = 0.0
Identities = 787/839 (94%), Gaps = 3/839 (0%)
Strand=Plus/Plus
Query 106 TCAATTTGAAAAAATGTCGCAATCAACCGTAGATGTTCCGCCAAAGGGTGGGTTTAGCTT 165
||||||| ||||||||||||||||||| ||||||||| || |||||||||||||||||||
Sbjct 4 TCAATTT-AAAAAATGTCGCAATCAACAGTAGATGTTTCGGCAAAGGGTGGGTTTAGCTT 62
Query 166 CGATC-TGTGTAAGAGAAATGATATGCTTACACAAAAGGGTCTTAAAGCTCCGTCTTTTT 224
||| | |||||||||||||||| |||||||||||| |||||||||||||||||||||| |
Sbjct 63 CGA-CTTGTGTAAGAGAAATGAGATGCTTACACAAGAGGGTCTTAAAGCTCCGTCTTTCT 121
Query 225 TGAAGACTGGAACAACCATTGTTGGTTTGATTTTCAAGGATGGTGTGATACTAGGGGCAG 284
||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 122 TGAAGACCGGAACAACCATTGTCGGTTTGATTTTCAAGGATGGTGTGATACTAGGGGCAG 181
Query 285 ATACCCGAGCAACTGAGGGGCCAATTGTTGCTGATAAGAACTGTGAGAAGATTCACTATA 344
|||||||||| || |||||||| |||||||||||||| |||||||| |||||||||||||
Sbjct 182 ATACCCGAGCGACCGAGGGGCCCATTGTTGCTGATAAAAACTGTGAAAAGATTCACTATA 241
Query 345 TGGCACCAAACATATATTGCTGTGGTGCAGGAACTGCGGCTGATACTGAAGCAGTCACTG 404
||||||||||||||||||| |||||||||||||| |||||||| ||||||||||| ||||
Sbjct 242 TGGCACCAAACATATATTGTTGTGGTGCAGGAACCGCGGCTGACACTGAAGCAGTTACTG 301
Query 405 ATATGGTCAGCTCACAGCTGCGATTGCATCGTTACCAGACTGGTCGAGACTCTCGGGTCA 464
||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |
Sbjct 302 ATATGGTCAGCTCACAGCTGCGATTGCATCGTTACGAGACTGGTCGTGACTCTCGGGTTA 361
Query 465 TTACTGCTTTGACCCTTCTCAAAAAACATCTTTTCAGCTACCAAGGTCATGTCTCTGCTG 524
|||||||||| || || ||||||||||||||||||||||| |||||||||||||||||||
Sbjct 362 TTACTGCTTTAACTCTCCTCAAAAAACATCTTTTCAGCTATCAAGGTCATGTCTCTGCTG 421
Query 525 CTCTTGTACTCGGTGGAGTTGATATCACTGGTCCACATCTGCATACTATATACCCACACG 584
| ||||| || |||||||||||||||||||| ||||||||||||||| |||||||| |||
Sbjct 422 CGCTTGTGCTTGGTGGAGTTGATATCACTGGCCCACATCTGCATACTCTATACCCAAACG 481
Query 585 GTTCAACTGACACTCTTCCATTCGCCACAATGGGTTCGGGTTCTCTTGCTGCTATGTCTG 644
||| |||||| ||||||||||| || ||||||||||| ||||||||||||||||||||||
Sbjct 482 GTTTAACTGAAACTCTTCCATTTGCTACAATGGGTTCTGGTTCTCTTGCTGCTATGTCTG 541
Query 645 TGTTTGAGGCAAAGTATAAAGAAGGCCTAACTAGGGATGAAGGAATTAAGCTGGTCGCTG 704
|||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct 542 TGTTTGAGGCGAAGTACAAAGAAGGCCTAACTAGGGATGAAGGAATTAAGTTGGTCGCTG 601
Query 705 AATCCATATGCTCGGGTATATTCAATGACCTGGGTAGTGGTAGCAACGTGGACATCTGCG 764
|| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 602 AAGCCATATGCTCTGGTATATTCAATGACCTGGGTAGTGGTAGCAACGTAGACATCTGCG 661
Query 765 TGATCACAAAGGGGAACAAGGAATATCTCAGGAACTACATGGAACCAAACCCAAGAACCT 824
||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||
Sbjct 662 TGATCACAAAGGGGAACAAGGAATACCTGAGGAATTACATGGAACCAAACCCAAGAACCT 721
Query 825 ATGTCAGCAGCAAAGGCTATTCCTTCACCAAGAAAACTGAGGTTCTTCTCACCAAAATCA 884
||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct 722 ATGTCAGCAGCAAAGGCTATTCCTTCACCAAGAAAACCGAGGTTCTTCTTACCAAAATCA 781
Query 885 CCCCATTGCTGGAGCGAGTCGAAATCACAGAAGTTGGTGAAGCTATGGAGGAATAATTC 943
||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||
Sbjct 782 CCCCATTGCTGGAGCGAGTCGAAATTACAGAAGTCGGTGAAGCTATGGAGGAATGATTC 840
> Ahg887559 jgi|Araly1|887559|Al_scaffold_0398_1
Length=822
Score = 1243 bits (673), Expect = 0.0
Identities = 773/822 (94%), Gaps = 4/822 (0%)
Strand=Plus/Plus
Query 119 ATGTCGCAATCAACCGTAGATGTTCCGCCAAAGGGTGGGTTTAGCTTCGATC-TGTGTAA 177
|||||||||||||| ||||||||| || |||||||||||||||||||||| | |||||||
Sbjct 1 ATGTCGCAATCAACAGTAGATGTTTCGGCAAAGGGTGGGTTTAGCTTCGA-CTTGTGTAA 59
Query 178 GAGAAATGATATGCTTACACAAAAGGGTCTTAAAGCTCCGTCTTTTTTGAAGACTGGAAC 237
||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 60 GAGAAATGAGATGCTTACACAAAAGGGTCTTAAAGCTCCGTCTTTCTTGAAGACTGGAAC 119
Query 238 AACCATTGTTGGTTTGATTTTCAAGGATGGTGTGATACTAGGGGCAGATACCCGAGCAAC 297
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 120 AACCATTGTCGGTTTGATTTTCAAGGATGGTGTGATACTAGGGGCAGATACCCGAGCGAC 179
Query 298 TGAGGGGCCAATTGTTGCTGATAAGAACTGTGAGAAGATTCACTATATGGCACCAAACAT 357
|||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 180 CGAGGGGCCCATTGTTGCTGATAAAAACTGTGAAAAGATTCACTATATGGCACCAAACAT 239
Query 358 ATATTGCTGTGGTGCAGGAACTGCGGCTGATACTGAAGCAGTCACTGATATGGTCAGCTC 417
|||||| |||||||||||||| |||||||| ||||||||||| |||||||||||||||||
Sbjct 240 ATATTGTTGTGGTGCAGGAACCGCGGCTGACACTGAAGCAGTTACTGATATGGTCAGCTC 299
Query 418 ACAGCTGCGATTGCATCGTTACCAGACTGGTCGAGACTCTCGGGTCATTACTGCTTTGAC 477
|||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||| ||
Sbjct 300 ACAGCTGCGATTGCATCGTTACGAGACTGGTCGTGACTCTCGGGTTATTACTGCTTTAAC 359
Query 478 CCTTCTCAAAAAACATCTTTTCAGCTACCAAGGTCATGTCTCTGCTGCTCTTGTACTCGG 537
|| ||||||||||||||||||||||| |||||||||||||||||||| ||||| || ||
Sbjct 360 TCTCCTCAAAAAACATCTTTTCAGCTATCAAGGTCATGTCTCTGCTGCGCTTGTGCTTGG 419
Query 538 TGGAGTTGATATCACTGGTCCACATCTGCATACTATAT-ACCCACACGGTTCAACTGACA 596
|||||||||||||||||| ||||||||||||||||| | ||||| |||||| |||||| |
Sbjct 420 TGGAGTTGATATCACTGGCCCACATCTGCATACTAT-TGACCCAAACGGTTTAACTGAAA 478
Query 597 CTCTTCCATTCGCCACAATGGGTTCGGGTTCTCTTGCTGCTATGTCTGTGTTTGAGGCAA 656
|||||||||| || ||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 479 CTCTTCCATTTGCTACAATGGGTTCTGGTTCTCTTGCTGCTATGTCTGTGTTTGAGGCGA 538
Query 657 AGTATAAAGAAGGCCTAACTAGGGATGAAGGAATTAAGCTGGTCGCTGAATCCATATGCT 716
|||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct 539 AGTACAAAGAAGGCCTAACTAGGGATGAAGGAATTAAGTTGGTCGCTGAAGCCATATGCT 598
Query 717 CGGGTATATTCAATGACCTGGGTAGTGGTAGCAACGTGGACATCTGCGTGATCACAAAGG 776
| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 599 CTGGTATATTCAATGACCTGGGTAGTGGTAGCAACGTAGACATCTGCGTGATCACAAAGG 658
Query 777 GGAACAAGGAATATCTCAGGAACTACATGGAACCAAACCCAAGAACCTATGTCAGCAGCA 836
||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||
Sbjct 659 GGAACAAGGAATACCTGAGGAATTACATGGAACCAAACCCAAGAACCTATGTCAGCAGCA 718
Query 837 AAGGCTATTCCTTCACCAAGAAAACTGAGGTTCTTCTCACCAAAATCACCCCATTGCTGG 896
||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct 719 AAGGCTATTCCTTCACCAAGAAAACCGAGGTTCTTCTTACCAAAATCACCCCATTGCTGG 778
Query 897 AGCGAGTCGAAATCACAGAAGTTGGTGAAGCTATGGAGGAAT 938
||||||||||||| |||||||| |||||||||||||||||||
Sbjct 779 AGCGAGTCGAAATTACAGAAGTCGGTGAAGCTATGGAGGAAT 820
> Ahg908190 jgi|Araly1|908190|Al_scaffold_0002_1271
Length=822
Score = 1232 bits (667), Expect = 0.0
Identities = 771/822 (94%), Gaps = 4/822 (0%)
Strand=Plus/Plus
Query 119 ATGTCGCAATCAACCGTAGATGTTCCGCCAAAGGGTGGGTTTAGCTTCGATC-TGTGTAA 177
|||||||||||||| ||||||||| || |||||||||||||||||||||| | |||||||
Sbjct 1 ATGTCGCAATCAACAGTAGATGTTTCGGCAAAGGGTGGGTTTAGCTTCGA-CTTGTGTAA 59
Query 178 GAGAAATGATATGCTTACACAAAAGGGTCTTAAAGCTCCGTCTTTTTTGAAGACTGGAAC 237
||||||||| |||||||||||| |||||||||||||||||||||| |||||||| |||||
Sbjct 60 GAGAAATGAGATGCTTACACAAGAGGGTCTTAAAGCTCCGTCTTTCTTGAAGACCGGAAC 119
Query 238 AACCATTGTTGGTTTGATTTTCAAGGATGGTGTGATACTAGGGGCAGATACCCGAGCAAC 297
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 120 AACCATTGTCGGTTTGATTTTCAAGGATGGTGTGATACTAGGGGCAGATACCCGAGCGAC 179
Query 298 TGAGGGGCCAATTGTTGCTGATAAGAACTGTGAGAAGATTCACTATATGGCACCAAACAT 357
|||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 180 CGAGGGGCCCATTGTTGCTGATAAAAACTGTGAAAAGATTCACTATATGGCACCAAACAT 239
Query 358 ATATTGCTGTGGTGCAGGAACTGCGGCTGATACTGAAGCAGTCACTGATATGGTCAGCTC 417
|||||| |||||||||||||| |||||||| ||||||||||| |||||||||||||||||
Sbjct 240 ATATTGTTGTGGTGCAGGAACCGCGGCTGACACTGAAGCAGTTACTGATATGGTCAGCTC 299
Query 418 ACAGCTGCGATTGCATCGTTACCAGACTGGTCGAGACTCTCGGGTCATTACTGCTTTGAC 477
|||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||| ||
Sbjct 300 ACAGCTGCGATTGCATCGTTACGAGACTGGTCGTGACTCTCGGGTTATTACTGCTTTAAC 359
Query 478 CCTTCTCAAAAAACATCTTTTCAGCTACCAAGGTCATGTCTCTGCTGCTCTTGTACTCGG 537
|| ||||||||||||||||||||||| |||||||||||||||||||| ||||| || ||
Sbjct 360 TCTCCTCAAAAAACATCTTTTCAGCTATCAAGGTCATGTCTCTGCTGCGCTTGTGCTTGG 419
Query 538 TGGAGTTGATATCACTGGTCCACATCTGCATACTATAT-ACCCACACGGTTCAACTGACA 596
|||||||||||||||||| ||||||||||||||||| | ||||| |||||| |||||| |
Sbjct 420 TGGAGTTGATATCACTGGCCCACATCTGCATACTAT-TGACCCAAACGGTTTAACTGAAA 478
Query 597 CTCTTCCATTCGCCACAATGGGTTCGGGTTCTCTTGCTGCTATGTCTGTGTTTGAGGCAA 656
|||||||||| || ||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 479 CTCTTCCATTTGCTACAATGGGTTCTGGTTCTCTTGCTGCTATGTCTGTGTTTGAGGCGA 538
Query 657 AGTATAAAGAAGGCCTAACTAGGGATGAAGGAATTAAGCTGGTCGCTGAATCCATATGCT 716
|||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct 539 AGTACAAAGAAGGCCTAACTAGGGATGAAGGAATTAAGTTGGTCGCTGAAGCCATATGCT 598
Query 717 CGGGTATATTCAATGACCTGGGTAGTGGTAGCAACGTGGACATCTGCGTGATCACAAAGG 776
| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 599 CTGGTATATTCAATGACCTGGGTAGTGGTAGCAACGTAGACATCTGCGTGATCACAAAGG 658
Query 777 GGAACAAGGAATATCTCAGGAACTACATGGAACCAAACCCAAGAACCTATGTCAGCAGCA 836
||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||
Sbjct 659 GGAACAAGGAATACCTGAGGAATTACATGGAACCAAACCCAAGAACCTATGTCAGCAGCA 718
Query 837 AAGGCTATTCCTTCACCAAGAAAACTGAGGTTCTTCTCACCAAAATCACCCCATTGCTGG 896
||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct 719 AAGGCTATTCCTTCACCAAGAAAACCGAGGTTCTTCTTACCAAAATCACCCCATTGCTGG 778
Query 897 AGCGAGTCGAAATCACAGAAGTTGGTGAAGCTATGGAGGAAT 938
||||||||||||| |||||||| |||||||||||||||||||
Sbjct 779 AGCGAGTCGAAATTACAGAAGTCGGTGAAGCTATGGAGGAAT 820
> Ahg493925 jgi|Araly1|493925|fgenesh2_kg.7__3358__AT5G40580.2
Length=1033
Score = 1003 bits (543), Expect = 0.0
Identities = 739/834 (89%), Gaps = 12/834 (1%)
Strand=Plus/Plus
Query 116 AAAATGTCGCAATCAACCGTAGATGTT-CCGCC-AAAGGGTGGGTTTAGCTTCGATCTGT 173
|||||| |||| || |||| ||| || ||||| ||| |||||||||||||| |||||||
Sbjct 20 AAAATGACGCACTCGTCCGTCGAT-TTACCGCCGAAA-GGTGGGTTTAGCTTTGATCTGT 77
Query 174 GTAAGAGAAATGATATGCTTACACAAAAGGGTCTTAAAGCTCCGTCTTTTTTGAAGACTG 233
| || || ||||||||||| ||||| |||||||||||||||||||| ||| | |||||||
Sbjct 78 GCAAAAGGAATGATATGCTGACACAGAAGGGTCTTAAAGCTCCGTCGTTTCTCAAGACTG 137
Query 234 GAACAACCATTGTTGGTTTGATTTTCAAGGATGGTGTGATACTAGGGGCAGATACCCGAG 293
||||||| |||||||| |||||||||||||||||||||||||| ||||| ||||| || |
Sbjct 138 GAACAACTATTGTTGGGTTGATTTTCAAGGATGGTGTGATACTTGGGGCTGATACACGGG 197
Query 294 CAACTGAGGGGCCAATTGTTGCTGATAAGAACTGTGAGAAGATTCACTATATGGCACCAA 353
||||||| ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct 198 CAACTGAAGGGCCTATTGTGGCTGATAAGAACTGTGAGAAGATTCACTACATGGCACCAA 257
Query 354 ACATATATTGCTGTGGTGCAGGAACTGCGGCTGATACTGAAGCAGTCACTGATATGGTCA 413
|||| ||||| ||||||||||||||||| ||||| ||||||||||| |||||||||||||
Sbjct 258 ACATTTATTGTTGTGGTGCAGGAACTGCTGCTGACACTGAAGCAGTAACTGATATGGTCA 317
Query 414 GCTCACAGCTGCGATTGCATCGTTACCAGACTGGTCGAGACTCTCGGGTCATTACTGCTT 473
|||||||| |||| |||||| | ||||||||||| ||||| ||||| ||||||||||| |
Sbjct 318 GCTCACAGTTGCGGTTGCATAGATACCAGACTGGCCGAGATTCTCGAGTCATTACTGCAT 377
Query 474 TGACCCTTCTCAAAAAACATCTTTTCAGCTACCAAGGTCATGTCTCTGCTGCTCTTGTAC 533
||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct 378 TGACCCTTCTCAAAAAACATCTTTTCAGCTATCAAGGTCATGTCTCAGCTGCTCTTGTAC 437
Query 534 TCGGTGGAGTTGATATCACTGGTCCACATCTGCATACTATATACCCACACGGTTCAACTG 593
| ||||||||||| || || || || ||||||||||| ||||||||||||||||| ||||
Sbjct 438 TTGGTGGAGTTGACATTACCGGGCCTCATCTGCATACCATATACCCACACGGTTCCACTG 497
Query 594 ACACTCTTCCATTCGCCACAATGGGTTCGGGTTCTCTTGCTGCTATGTCTGTGTTTGAGG 653
| ||||| ||||| || ||||||||||| ||||| |||||||| ||||| |||||||| |
Sbjct 498 ATACTCTACCATTTGCTACAATGGGTTCTGGTTCCCTTGCTGCCATGTCAGTGTTTGAAG 557
Query 654 CAAAGTATAAAGAAGGCCTAACTAGGGATGAAGGAATTAAGCTGGTCGCTGAATCCATAT 713
|||||||||||||||| |||||||| || |||||||| ||| |||| |||||| ||||||
Sbjct 558 CAAAGTATAAAGAAGGTCTAACTAGAGACGAAGGAATCAAGTTGGTTGCTGAAGCCATAT 617
Query 714 GCTCGGGTATATTCAATGACCTGGGTAGTGGTAGCAACGTGGACATCTGCGTGATCACAA 773
|||| |||||||| || ||||| |||||||||||||| ||||| ||||| |||||||| |
Sbjct 618 GCTCTGGTATATTTAACGACCTTGGTAGTGGTAGCAATGTGGATATCTGTGTGATCACTA 677
Query 774 AGGGGAACAAGGAATATCTC-AGGAACTACATGGAACCAAACCCAAGAACCTATGTCAGC 832
||||| |||||||||| || ||||| ||||||||||||||||||||||||||||| |||
Sbjct 678 AGGGGCACAAGGAATA-CTTGAGGAATTACATGGAACCAAACCCAAGAACCTATGTTAGC 736
Query 833 AGCAAAGGCTATTCCTTCACCAAGAAAACTGAGGTTCTTCTCACCAAAATCACCCCATTG 892
|||||||||||||| ||||||||||||||||||||||| ||||||||||| || |||||
Sbjct 737 AGCAAAGGCTATTCATTCACCAAGAAAACTGAGGTTCTACTCACCAAAATTACACCATTA 796
Query 893 -CTGGAGCGAGTCGAAATCACAGAAGT---TGGTGAAGCTATGGAGGAAT-AAT 941
| ||||||||||||||| |||||| |||||||||||||||||||| |||
Sbjct 797 TC-GGAGCGAGTCGAAATTGTAGAAGTGGCTGGTGAAGCTATGGAGGAATGAAT 849
> Ahg936454 jgi|Araly1|936454|scaffold_500645.1
Length=586
Score = 110 bits (59), Expect = 3e-23
Identities = 71/77 (92%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 332 AAGATTCACTATATGGCACCAAACATATATTGCTGTGGTGCAGGAACTGCGGCTGATACT 391
||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||
Sbjct 101 AAGATTCACTATATGGCACCAAACATATATTGCTGTGGTGCAGGAACCACTGCTGACACT 160
Query 392 GAAGCAGTCACTGATAT 408
|||||||| |||| |||
Sbjct 161 GAAGCAGTAACTGGTAT 177
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 45938114985
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5