BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G43190.1 Length=2764 Score E Sequences producing significant alignments: (Bits) Value Ahg484788 jgi|Araly1|484788|fgenesh2_kg.5__780__AT3G43190.1 3884 0.0 Ahg941635 jgi|Araly1|941635|scaffold_602179.1 2392 0.0 > Ahg484788 jgi|Araly1|484788|fgenesh2_kg.5__780__AT3G43190.1 Length=2725 Score = 3884 bits (2103), Expect = 0.0 Identities = 2415/2568 (94%), Gaps = 12/2568 (0%) Strand=Plus/Plus Query 66 TTCATTCACTAC--A-TATTTCTAGTGACCTCCTTCGCCAGTGACTTTCCGTAGCAATTT 122 |||||||||| | | |||||| |||||||||||| |||||| ||||| ||||||| ||| Sbjct 33 TTCATTCACTTCTAATTATTTCCAGTGACCTCCTTGGCCAGTAACTTTTCGTAGCATTTT 92 Query 123 AAGTTTCAAAAGCTTTGTGATTGTGTTTGAAATGGCAAACGCAGAACGTGTAATAACGCG 182 ||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||| Sbjct 93 CAGTTTCAAAAGCTTTTTGATTTTGTTTGAAATGGCAAACGCGGAACGTGTAATAACGCG 152 Query 183 AGTCCACAGCCAGCGAGAGCGTTTGGATGCAACTCTTGTTGCTCAGAAAAATGAAGTATT 242 ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| | Sbjct 153 CGTCCACAGCCAGCGAGAGCGTTTGGATGCTACTCTTATTGCTCAGAAAAATGAAGTCCT 212 Query 243 TGCTTTGCTCTCAAGGGTTGAAGCCAAAGGCAAAGGCATTCTACAACACCACCAGATCAT 302 |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct 213 TGCTTTGCTCTCAAGGGTTGAAGCCAAAGGCAAAGGCATTCTACAATATCACCAGATCAT 272 Query 303 TGCTGAATTTGAGGCAATGCCTTTAGAGACACAGAAGAAGCTTAAAGGTGGAGCTTTCTT 362 |||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||| Sbjct 273 TGCTGAGTTTGAGGCAATGCCTTTAGAGACACAAAAGAAGCTTCAAGGTGGAGCTTTCTT 332 Query 363 CGAATTTCTCCGATCAGCTCAAGAGGCAATTGTGTTACCACCATTTGTTGCTTTAGCTGT 422 |||| | ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 333 CGAAATCCTCCGTTCAGCTCAAGAAGCAATTGTGTTACCACCATTTGTTGCTTTAGCTGT 392 Query 423 GAGACCAAGACCTGGAGTTTGGGAATACGTAAGAGTTAACCTCCATGATCTTGTCGTTGA 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 393 GAGACCAAGACCTGGAGTTTGGGAATACGTAAGAGTTAACCTCCATGATCTTGTCGTTGA 452 Query 483 GGAGCTTCAAGCTTCTGAATATCTTCAATTCAAGGAAGAGCTCGTCGATGGAATTAAGAA 542 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 453 CGAGCTTCAAGCTTCTGAATATCTTCAATTCAAGGAAGAGCTCGTCGATGGAATTAGGAA 512 Query 543 TGGAAACTTCACTCTTGAACTTGACTTTGAACCATTCAACGCGGCATTCCCTCGTCCTAC 602 ||| ||||||||||| || ||||||||||||||||||||||| |||||||||||||| || Sbjct 513 TGGTAACTTCACTCTCGAGCTTGACTTTGAACCATTCAACGCCGCATTCCCTCGTCCCAC 572 Query 603 GCTCAACAAGTACATTGGAGATGGCGTTGAGTTCCTCAACCGCCATCTCTCGGCTAAGCT 662 ||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||| Sbjct 573 GCTCAACAAGTACATTGGAAATGGGGTTGAGTTCCTCAATCGCCATCTCTCGGCTAAGCT 632 Query 663 CTTCCATGACAAGGAGAGCTTGCATCCGCTGCTCAAGTTCCTCCGCCTCCATTCCCACGA 722 ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct 633 CTTCCATGACAAGGAGAGCTTGCATCCTCTGCTCAAGTTCCTGCGCCTCCATTCCCACGA 692 Query 723 GGGAAAGACTCTGATGCTTAACAATAGGATCCAGAACCTAAACACCCTACAACACAATCT 782 ||| |||||||||||||||||| | |||||||||||||||||||| || ||||||||||| Sbjct 693 GGGCAAGACTCTGATGCTTAACGACAGGATCCAGAACCTAAACACACTGCAACACAATCT 752 Query 783 GAGAAAAGCAGAGGAATATCTAATGGAGCTGAAGCCTGAGACACTCTACTCAGAGTTTGA 842 ||| ||||||||||| ||||| ||||||||||| || ||||||| |||||| |||||||| Sbjct 753 GAGGAAAGCAGAGGAGTATCTTATGGAGCTGAAACCCGAGACACCCTACTCGGAGTTTGA 812 Query 843 GCACAAGTTCCAGGAGATTGGTCTTGAGAGAGGCTGGGGAGACACCGCGGAGCGTGTTCT 902 ||||||||||||| |||||||||||||||||| |||||||||||||||| |||||| || Sbjct 813 CCACAAGTTCCAGGGGATTGGTCTTGAGAGAGGTTGGGGAGACACCGCGGTGCGTGTACT 872 Query 903 TAACATGATCCGTCTTCTTCTTGACCTTCTCGAGGCACCTGACCCTTGT-ACTCTTGAGA 961 | ||||||| ||||||||||||||||||||||||||||||||||||| | ||||||| || Sbjct 873 TGACATGATTCGTCTTCTTCTTGACCTTCTCGAGGCACCTGACCCTT-TCACTCTTGGGA 931 Query 962 ATTTCCTTGGAAGAATCCCAATGGTTTTCAACGTTGTGATCCTCTCTCCTCATGGATACT 1021 ||||||||||||| || |||||||||||||||||||||||| | ||||| |||||||||| Sbjct 932 ATTTCCTTGGAAGGATACCAATGGTTTTCAACGTTGTGATCTTATCTCCACATGGATACT 991 Query 1022 TTGCTCAGGACAATGTTCTTGGTTACCCTGACACAGGTGGTCAGGTTGTTTACATTCTTG 1081 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 992 TTGCTCAGGATAATGTTCTTGGTTACCCTGACACTGGTGGTCAGGTTGTTTACATTCTTG 1051 Query 1082 ATCAAGTTCGTGCTCTCGAAACAGAGATGCTCCAACGCATCAAACAACAAGGACTCAACA 1141 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1052 ATCAAGTTCGTGCTCTCGAAACAGAGATGCTCCAACGCATCAAACAACAAGGACTCACCA 1111 Query 1142 TCACTCCGAGAATCCTAATCATCACTCGGCTGCTTCCTGACGCAGCAGGAACCACTTGTG 1201 ||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||| Sbjct 1112 TCACTCCGAGAATCCTAATTATCACTCGGTTGCTTCCTGATGCAGCAGGAACCACTTGTG 1171 Query 1202 GTCAACGTCTAGAGAAAGTGTACGGATCTCAGTATTGTGATATCCTCCGTGTGCCTTTTA 1261 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1172 GTCAACGTCTAGAGAAAGTGTACGGATCTCAGTATTGTGATATCCTCCGTGTACCTTTTA 1231 Query 1262 GAACAGAGAAAGGAATCGTTCGCAAATGGATATCAAGGTTTGAGGTCTGGCCGTATCTAG 1321 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1232 GAACAGAGAAAGGAATCGTTCGCAAATGGATCTCAAGGTTTGAGGTCTGGCCGTATCTAG 1291 Query 1322 AGACTTTTACCGAGGATGTTGCCGCTGAAATCTCGAAAGAGTTGCAGGGGAAGCCTGAC- 1380 |||||||||||||||||||||| |||||||||||||| ||||| || ||||| |||||| Sbjct 1292 AGACTTTTACCGAGGATGTTGCAGCTGAAATCTCGAATGAGTTACAAGGGAAACCTGACC 1351 Query 1381 TTGATCATTGGAAACTACAGTGATGGTAATCTTGTTGCATCCTTGTTAGCACACAAACTT 1440 || |||||||||||||| |||||||||||||||||||| || |||||||||||||||||| Sbjct 1352 TT-ATCATTGGAAACTATAGTGATGGTAATCTTGTTGCCTCTTTGTTAGCACACAAACTT 1410 Query 1441 GGTGTCACTCAGTGCACCATCGCTCATGCTTTGGAGAAGACTAAGTACCCGGATTCTGAT 1500 |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1411 GGTGTCACTCAGTGTACCATTGCTCATGCTTTGGAGAAGACTAAGTACCCGGATTCTGAT 1470 Query 1501 ATCTACTGGAAGAAGCTCGACGAGAAGTATCACTTTTCTTGCCAGTTCACGGCTGATCTT 1560 ||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||| Sbjct 1471 ATCTACTGGAAGAAGCTTGACGAGAAGTATCACTTCTCTTGCCAGTTCACTGCTGATCTT 1530 Query 1561 ATCGCCATGAACCACACAGATTTCATCATCACAAGTACTTTCCAAGAAATTGCTGGAAGC 1620 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1531 ATCGCCATGAACCACACAGATTTCATCATCACAAGTACTTTCCAAGAAATTGCTGGAAGC 1590 Query 1621 AAGGACACTGTTGGTCAATATGAGAGCCACAGATCTTTCACACTTCCCGGGTTGTACCGT 1680 ||||||||||||||||| || ||||| |||| | ||||||||||||||||| | || ||| Sbjct 1591 AAGGACACTGTTGGTCAGTACGAGAGTCACACAGCTTTCACACTTCCCGGGCTATATCGT 1650 Query 1681 GTAGTTCACGGTATTGATGTGTTTGATCCAAAGTTCAACATTGTCTCTCCTGGAGCAGAT 1740 || |||||||| || |||||||||||||| ||||||||||||||||||||||| || ||| Sbjct 1651 GTGGTTCACGGGATCGATGTGTTTGATCCCAAGTTCAACATTGTCTCTCCTGGTGCGGAT 1710 Query 1741 ATGAGCATCTACTTCGCTTACACCGAGGAGAAGCGTAGATTAACTGCATTCCATCTAGAG 1800 |||||||| |||||||| ||||| ||||||||||||||||||||||||||||||| |||| Sbjct 1711 ATGAGCATATACTTCGCCTACACTGAGGAGAAGCGTAGATTAACTGCATTCCATCAAGAG 1770 Query 1801 ATCGAGGAGCTCCTCTATAGTGATGTTGAAAACGAAGAGCACTTATGTGTGCTTAAGGAC 1860 || |||||||||||||| ||||||||||| |||||| ||||| |||||||||| |||||| Sbjct 1771 ATTGAGGAGCTCCTCTACAGTGATGTTGAGAACGAAAAGCACCTATGTGTGCTAAAGGAC 1830 Query 1861 AAGAAGAAGCCAATAATTTTCACCATGGCTAGGCTTGACCGTGTAAAGAACTTATCAGGT 1920 |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct 1831 AAGAAGAAGCCAATCCTCTTCACCATGGCTAGGCTTGACCGTGTAAAGAACTTATCAGGT 1890 Query 1921 CTTGTTGAGTGGTACGGTAAGAACACTCGCTTGCGCGAACTGGTGAACTTGGTGGTTGTG 1980 |||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||| Sbjct 1891 CTTGTTGAGTGGTATGGTAAGAACACTCGCCTGCGCGAACTGGTGAACTTGGTCGTTGTG 1950 Query 1981 GGTGGAGACAGGAGGAAAGAGTCACAGGACAACGAAGAGAAGGCCGAGATGAAGAAAATG 2040 |||||||||||||| |||||||| |||||||| ||||| ||||| ||||||||||||||| Sbjct 1951 GGTGGAGACAGGAGCAAAGAGTCGCAGGACAATGAAGAAAAGGCTGAGATGAAGAAAATG 2010 Query 2041 TATGAACTGATAGAGGAATACAAACTCAACGGGCAATTCCGATGGATCTCTTCACAGATG 2100 ||||| ||||| |||||||||||||| |||||||| || ||||||||||| ||||||||| Sbjct 2011 TATGATCTGATTGAGGAATACAAACTTAACGGGCAGTTTCGATGGATCTCCTCACAGATG 2070 Query 2101 AACAGAGTGAGAAACGGTGAGCTTTACCGTTACATATGTGACACTAAAGGTGCATTTGTG 2160 ||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||| Sbjct 2071 AACCGAGTGAGAAACGGCGAGCTTTACCGTTACATATGTGACACCAAAGGTGCATTTGTA 2130 Query 2161 CAGCCTGCTCTTTATGAAGCCTTTGGGTTGACTGTTGTTGAGGCTATGACCTGTGGGTTA 2220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2131 CAGCCTGCTCTTTATGAAGCCTTTGGGTTGACTGTTGTTGAGGCTATGACCTGTGGGTTA 2190 Query 2221 CCGACTTTCGCTACTTGTAATGGCGGTCCTGCTGAGATCATTGTGCATGGAAAATCTGGT 2280 ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct 2191 CCGACTTTCGCTACTTGCAATGGTGGTCCTGCTGAGATCATTGTGCATGGAAAATCTGGT 2250 Query 2281 TTCCACATTGATCCATATCATGGTGACAAGGCAGCTGAGA-GTCTTGCTGATTTCTTCAC 2339 ||||||||||||||||| ||||||||| |||||||||||| | ||||||||||||||||| Sbjct 2251 TTCCACATTGATCCATACCATGGTGACCAGGCAGCTGAGACG-CTTGCTGATTTCTTCAC 2309 Query 2340 CAAGTGTAAGCATGACCCATCTCACTGGGATCAGATCTCATTGGGAGGACTTGAGAGGAT 2399 |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 2310 CAAGTGTAAGCATGACCCATCTCATTGGGATCAGATTTCATTGGGAGGACTTGAGAGGAT 2369 Query 2400 CCAGGAGAAATATACTTGGCAAATATACTCACAGAGGCTCTTGACATTGACTGGTGTCTA 2459 ||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||| Sbjct 2370 CCAGGAGAAATATACATGGCAAATTTACTCAGAGAGGCTCTTGACATTGACTGGTGTCTA 2429 Query 2460 CGGCTTTTGGAAACATGTCTCGAACCTTGACCGTCTTGAGAGTCGTCGATACCTTGAGAT 2519 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2430 CGGCTTCTGGAAACATGTCTCGAACCTTGACCGTCTTGAGAGTCGTCGATACCTTGAGAT 2489 Query 2520 GTTCTACGCACTGAAGTACCGCCCACTGGCTCAAGCTGTTCCTCTTGCTCATGAAGAGTG 2579 |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 2490 GTTCTACGCATTGAAGTACCGCCCACTGGCTCAAGCTGTTCCTCTTGCTCAGGAAGAGTG 2549 Query 2580 AAAGAAGAAGATTTTCTACATTCTACAACAATAAAGATCTCTCTTTGT 2627 |||||||| |||||||| ||||||||||||||||||||||| |||| Sbjct 2550 AAAGAAGA---TTTTCTACCTTCTACAACAATAAAGATCTCTCATTGT 2594 > Ahg941635 jgi|Araly1|941635|scaffold_602179.1 Length=2470 Score = 2392 bits (1295), Expect = 0.0 Identities = 2081/2461 (85%), Gaps = 51/2461 (2%) Strand=Plus/Plus Query 153 AATGGCAAACGCAGAACGTGTAATAACGCGAGTCCACAGCCAGCGAGAGCGTTTGGATGC 212 |||||||||||| |||||| | |||||||| ||||||||||| || ||||||||| | | Sbjct 23 AATGGCAAACGCTGAACGTATGATAACGCGCGTCCACAGCCAACGTGAGCGTTTGAACGA 82 Query 213 AACTCTTGTTGCTCAGAAAAATGAAGTATTTGCTTTGCTCTCAAGGGTTGAAGCCAAAGG 272 ||| |||||| || ||| ||| ||||| |||| ||||| || ||| ||||||||||||| Sbjct 83 AACGCTTGTTTCTGAGAGAAACGAAGTCCTTGCCTTGCTTTCCAGGATTGAAGCCAAAGG 142 Query 273 CAAAGGCATTCTACAACACCACCAGATCATTGCTGAATTTGAGGCAATGCCTTTAGAGAC 332 ||||| ||| ||||||| |||| |||||||||||||| || || ||||| ||| || Sbjct 143 TAAAGGTATTTTACAACAAAACCAAATCATTGCTGAATTCGAAGCTTTGCCTGGAGAAAC 202 Query 333 ACAGAAGAAGCTTAAAGGTGGAGCTTTCTTCGAATTTCTCCGAT-CAGCTCAAGAGGCAA 391 |||||||| ||| ||||||| |||||||||| ||||| || || |||| || |||| Sbjct 203 CCAGAAGAAACTTGAAGGTGGTCCTTTCTTCGACCTTCTCAAATCCA-CTCAGGAAGCAA 261 Query 392 TTGTGTTACCACCATTTGTTGCT-TTAGCTGTGAGACCAAGACCTGGAGTTTGGGAATAC 450 ||||||| ||||||| |||||| || |||||||||||||||||||| |||||||||||| Sbjct 262 TTGTGTTGCCACCATGGGTTGCTCTT-GCTGTGAGACCAAGACCTGGTGTTTGGGAATAC 320 Query 451 GTAAGAGTTAACCTCCATGATCTTGTCGTTGAGGAGCTTCAAGCTTCTGAATATCTTCAA 510 ||||||| || ||||||| |||||| ||||| || || ||| || |||| | |||||| Sbjct 321 ATAAGAGTCAATCTCCATGCTCTTGTGGTTGAAGAACTCCAACCTGCTGAGTTTCTTCAT 380 Query 511 TTCAAGGAAGAGCTCGTCGATGGAATTAAGAATGGAAACTTCACTCTTGAACTTGACTTT 570 ||||||||||| ||||| |||||| |||||||||| | ||||||||||| ||||| ||| Sbjct 381 TTCAAGGAAGAACTCGTTGATGGAGTTAAGAATGGTGATTTCACTCTTGAGCTTGA-TTT 439 Query 571 -GAACCATTCAACGCGGCATTCCCTCGTCCTACGCTCAACAAGTACATTGGAGATGGCGT 629 ||||||||||| ||| | ||||||||||| || |||||||| ||||||||| |||| || Sbjct 440 CGAACCATTCAATGCGTCTTTCCCTCGTCCAACACTCAACAAATACATTGGAAATGGTGT 499 Query 630 TGAGTTCCTCAACCGCCATC-TCTCGGCTAAGCTCTTCCATGACAAGGAGAGCTTGCATC 688 ||||||||| ||||| || | | || ||||||||||| |||||||||||||| |||| || Sbjct 500 TGAGTTCCTTAACCGTCA-CTTATCAGCTAAGCTCTTTCATGACAAGGAGAGTTTGCTTC 558 Query 689 CGCTGCTCAAGTTCCTCCGCCTCCATTCCCACGAGGGAAAG-ACTCTGATGCTT-AACAA 746 | |||| |||||||| || | || |||| |||| ||| || |||||| || | | Sbjct 559 CATTGCTTAAGTTCCTTCGTCGACACAGCCACCAGGGCAAGAAC-CTGATG-TTGAGTGA 616 Query 747 TAGGATCCAGAACCTAAACACCCTACAACACAATC-TGA-GAAAAGCAGAGGAATATCTA 804 | || || ||||| ||||| || |||||| | | ||| | ||||||||||| ||||| Sbjct 617 GAAAATTCAAAACCTCAACACTCTGCAACAC-ACCTTGATG-AAAGCAGAGGAGTATCT- 673 Query 805 ATG--GAGCTGAAGCCTGAGACACTC-TACT-CAGAGTTTGA-GCACAAGTTCCAGGAGA 859 || ||||| |||||||| |||| | || | ||||||||| || |||||| |||||| Sbjct 674 -TGCAGAGCTTAAGCCTGAAACAC-CGTA-TGAAGAGTTTGAGGC-CAAGTTTGAGGAGA 729 Query 860 TTGGTCTTGAGAGAGGCTGGGGAGACACCGCGGAGCGTGTTCTTAACATGATCCGTCTTC 919 ||||||||||||| || |||||||||| || |||||||| ||| ||||||||||||||| Sbjct 730 TTGGTCTTGAGAGGGGATGGGGAGACAATGCTGAGCGTGTCCTTGACATGATCCGTCTTC 789 Query 920 TTCTT-GACCTTCTCGAGGCACCTGACCCTTGTACTCTTGAGAATTTCCTTGGAAGAATC 978 || || |||||||| ||||| ||||| ||||| |||||||||| ||| ||||||||| | Sbjct 790 TT-TTGGACCTTCTTGAGGCGCCTGATCCTTGCACTCTTGAGACTTTTCTTGGAAGAGTA 848 Query 979 CCAATGGTTTTCAACGTTGTGATCCTCTCTCCTCATGGATACTTTGCTCAGGACAATGTT 1038 |||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct 849 CCAATGGTGTTCAACGTTGTGATCCTCTCTCCACATGGTTACTTTGCTCAGGACAATGTT 908 Query 1039 CTTGGTTACCCTGACACAGGTGGTCAGGTTGTTTACATTCTTGATCAAGTTCGTGCTCTC 1098 ||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||| Sbjct 909 CTTGGTTACCCTGACACTGGTGGCCAGGTTGTGTACATTCTTGATCAAGTTCGTGCTCTG 968 Query 1099 GAAACAGAGATGCTCCAACGCATCAAACAACAAGGACTCAACATCACTCCGAGAATCCT- 1157 |||||||||||||| || || || || ||||||||||||||||| | || ||||| || Sbjct 969 GAAACAGAGATGCTTCAGCGTATTAAGCAACAAGGACTCAACATTAAACCAAGAATTCTC 1028 Query 1158 AATCATCACTCGGCTGCTTCCTGACGCAGCAGGAACCACTTGTGGTCAACGTCTAGAGAA 1217 | || ||||||| || || ||||| || | ||||||||| |||||| ||||||| |||| Sbjct 1029 ATTC-TCACTCGACTCCTCCCTGATGCGGTAGGAACCACATGTGGTGAACGTCTCGAGAG 1087 Query 1218 AGTGTACGGA-TCTCAGTATTGTGATATCCTCCGTGTGCCTTTTAGAACAGAGAAA-GGA 1275 ||| || || ||| |||| |||||||| ||||||||||| || ||||||| ||| || Sbjct 1088 AGTTTA-TGATTCTGAGTACTGTGATATTCTCCGTGTGCCCTTCCGAACAGA-AAAGGGT 1145 Query 1276 ATCGTTCGCAAATGGATATCAAGGTTTGAGGTCTGGCCGTATCTAGAGACTTTTACCGAG 1335 || |||||||||||||| ||||| ||||| || ||||| ||||||||||||| |||||| Sbjct 1146 ATAGTTCGCAAATGGATCTCAAGATTTGAAGTTTGGCCATATCTAGAGACTTACACCGAG 1205 Query 1336 GATGTTGCCGCTGAAATCTCGAAAGAGTTGCAGGGGAAGCCTGA-CTTGATCATTGGAAA 1394 |||| ||| | ||| | |||||||| ||| | || |||||||| ||| |||||||| || Sbjct 1206 GATGCTGCGGTTGAGCTATCGAAAGAATTGAATGGAAAGCCTGACCTT-ATCATTGGTAA 1264 Query 1395 CTACAGTGATGGTAATCTTGTTGCATCCTTGTTAGCACACAAACTTGGTGTCACTCAGTG 1454 |||||||||||| ||||||||||| || || ||||| ||||||||||||||||||||||| Sbjct 1265 CTACAGTGATGGAAATCTTGTTGCCTCTTTATTAGCTCACAAACTTGGTGTCACTCAGTG 1324 Query 1455 CACCATCGCTCATGCTTTGGAGAAGACTAAGTACCCGGATTCTGATATCTACTGGAAGAA 1514 ||||| ||||||||| |||||||||| |||||||||||||| || |||||||||| ||| Sbjct 1325 TACCATTGCTCATGCTCTGGAGAAGACAAAGTACCCGGATTCCGACATCTACTGGAGGAA 1384 Query 1515 GCTCGACGAGAAGTATCACTTT-TCTTGCCAGTTCACGGCTGATCTTATCGCCATGAACC 1573 ||| ||||||||||| || ||| || ||||||||||| || ||| || |||| ||||||| Sbjct 1385 GCTTGACGAGAAGTACCA-TTTCTCATGCCAGTTCACTGCGGATATTTTCGCAATGAACC 1443 Query 1574 ACACAGATTTCATCATCACAAGTACTTTCCAAGAAATTGCTGGAAGCAAGGACACTGTTG 1633 |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1444 ACACTGATTTCATCATCACCAGTACTTTCCAAGAAATTGCTGGAAGCAAGGACACTGTTG 1503 Query 1634 GTCAATATGAGAGCCACA-GATCTTTCACACTTCCCGGGTTGTACCGTGTAGTTCACGGT 1692 | || ||||| ||||||| | |||| || |||||||| |||||||| || |||||||| Sbjct 1504 GGCAGTATGAAAGCCACACGGCCTTT-ACTCTTCCCGGATTGTACCGAGTTGTTCACGGG 1562 Query 1693 ATTGATGTGTTTGATCCAAAGTTCAACATTGTCTCTCCTGGAGCAGATATGAGCATCTAC 1752 || |||||||||||||| ||||||||||||||||| ||||| || ||||||| ||||||| Sbjct 1563 ATCGATGTGTTTGATCCCAAGTTCAACATTGTCTCCCCTGGTGCTGATATGAACATCTAC 1622 Query 1753 TTCGCTTACACCGAGGAGAAGCGTAGATTAACTGCATTCCA-TCTAGAGATCGAGGAGCT 1811 ||| ||||||| ||||||||||||||||| ||| |||||| ||| |||||||||||||| Sbjct 1623 TTCCCTTACACAGAGGAGAAGCGTAGATTGACTAAATTCCACTCT-GAGATCGAGGAGCT 1681 Query 1812 CCTCTATAGTGATGTTGAAAACGAAGAGCACTTATGTGTGCTTAAGGACAAGAAGAAGCC 1871 |||||| || ||||| || |||||||||||| | ||||| || ||||||||||||||||| Sbjct 1682 CCTCTACAGCGATGTCGAGAACGAAGAGCACCTGTGTGTCCTCAAGGACAAGAAGAAGCC 1741 Query 1872 AATAATTTTCACCATGGCTAGGCTTGACCGTGTAAAGAACTTATCAGGTCTTGTTGAGTG 1931 || | ||||| ||||||||||| |||||||| |||||||| ||||||||||||||||| Sbjct 1742 GATCCTCTTCACAATGGCTAGGCTCGACCGTGTCAAGAACTTGTCAGGTCTTGTTGAGTG 1801 Query 1932 GTACGGTAAGAACACTCGCTTGCGCGAACTGG-TGAACTTGGTGGTTGTGGGTGGAGACA 1990 |||||| |||||||| ||| |||| || |||| | ||||||||||||||||| ||||||| Sbjct 1802 GTACGGGAAGAACACCCGCCTGCGTGAGCTGGCT-AACTTGGTGGTTGTGGGAGGAGACA 1860 Query 1991 GGAGGAAAGAGTCACAGGACAACGAAGAGAAGGCCGAGATGAAGAAAATGTATGAACTGA 2050 |||||||||| ||| ||||||| |||||||| || |||||||||||||||||||| || | Sbjct 1861 GGAGGAAAGAATCAAAGGACAATGAAGAGAAAGCAGAGATGAAGAAAATGTATGATCTCA 1920 Query 2051 TAGAGGAATACAAACTCAACGGGCAATTCCGATGGATCTCTTCACAGATGAACAGAGTGA 2110 | || |||||||| |||||||| || ||| | |||||||| || ||||||||| | || | Sbjct 1921 TTGAAGAATACAAGCTCAACGGTCAGTTCAGGTGGATCTCCTCTCAGATGAACCGGGTTA 1980 Query 2111 GAAACGGTGAGCTTTACCGTTACATATGTGACACTAAAGGTGCATTTGTGCAGCCTGCTC 2170 | ||||||||||| ||| | ||||| |||||||| || |||||||||||||| ||||| Sbjct 1981 GGAACGGTGAGCTGTACAGGTACATCTGTGACACCAAGGGTGCATTTGTGCAACCTGCA- 2039 Query 2171 TT-TATGAAGCCTTTGGGTTGACTGTTGTTGAGGCTATGACCTGTGGGTTACCGACTTTC 2229 || |||||||||||||||||||||||||| ||||| ||||| ||||| |||||||||||| Sbjct 2040 TTGTATGAAGCCTTTGGGTTGACTGTTGTGGAGGCCATGACTTGTGGATTACCGACTTTC 2099 Query 2230 GCTACTTGTAATGGCGGTCCTGCTGAGATCATTGTGCATGGAAAATCTGGTTTCCACATT 2289 || ||||| || || ||||| ||||||||||||||||| || ||||| |||||||||||| Sbjct 2100 GCCACTTGCAAAGGTGGTCCAGCTGAGATCATTGTGCACGGTAAATCGGGTTTCCACATT 2159 Query 2290 GATCCATATCATGGTGA-CAAGGCAGCTGAGAGTCTTGCTGATTTCTTCACCAAGTGTAA 2348 || || || |||||| | || ||| ||||| | ||||||||||||||||||||||||||| Sbjct 2160 GACCCTTACCATGGTAATCA-GGCTGCTGATACTCTTGCTGATTTCTTCACCAAGTGTAA 2218 Query 2349 GCATGACCCATCTCACTGGGATCAGATCTCATTGGGAGGACTTGAGAGGATCCAGGAGAA 2408 | | || ||||||||||||||| |||||||| ||||| ||| ||||||| ||||||| Sbjct 2219 GGAGGATCCATCTCACTGGGATGAGATCTCAAAAGGAGGGCTTCAGAGGATTGAGGAGAA 2278 Query 2409 ATATACTTGGCAAATATACTCACAGAGGCTCTTGACATTGACTGGTGTCTACGGCTTTTG 2468 ||| ||||||||||| ||||||||||||||| ||||| |||||||||| || || || || Sbjct 2279 ATACACTTGGCAAATCTACTCACAGAGGCTCCTGACACTGACTGGTGTGTATGGATTCTG 2338 Query 2469 GAAACATGTCTCGAACCTTGACCGTCTTGAGAGTC-GTCGATACCTTGAGATGTTCTACG 2527 ||| ||||||||||||||||||| ||||||| | | | || |||||||| |||||||| | Sbjct 2339 GAAGCATGTCTCGAACCTTGACCATCTTGAG-GCCCGCCGTTACCTTGAAATGTTCTATG 2397 Query 2528 CACTGAAGTACCGCCCACTGGCTCAAGCTGTTCCTCTTGCTCATGAAGAGTGAA-AGAAG 2586 || ||||||| |||||| ||||||| ||||||||||||||||| || || |||| ||||| Sbjct 2398 CATTGAAGTATCGCCCATTGGCTCAGGCTGTTCCTCTTGCTCAAGATGATTGAAGAGAAG 2457 Query 2587 A 2587 | Sbjct 2458 A 2458 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 104291090810 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5