BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G45630.1 Length=3555 Score E Sequences producing significant alignments: (Bits) Value Ahg484947 jgi|Araly1|484947|fgenesh2_kg.5__939__AT3G45630.1 4927 0.0 Ahg358235 jgi|Araly1|358235|fgenesh1_pg.C_scaffold_8002022 1090 0.0 Ahg948121 jgi|Araly1|948121|scaffold_800008.1 828 0.0 > Ahg484947 jgi|Araly1|484947|fgenesh2_kg.5__939__AT3G45630.1 Length=3408 Score = 4927 bits (2668), Expect = 0.0 Identities = 3196/3445 (93%), Gaps = 59/3445 (2%) Strand=Plus/Plus Query 15 ttgtctcttgcaatctcccacttctctcaa---tcttcttcatcttccacaatctccgat 71 |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct 1 TTGTCTCTTGCAATCTCCCACTTCTCTCAATCTTCTTCTTCTTCTTCCACAATCTCCGAT 60 Query 72 cgaatct-ctctACTCAGCCGaaaaaaaTGAGTGATTACGGTGAAAAGACTTGCCCTTTG 130 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 CGAATCTCCT-TACTCAGCCGAAAAAAATGAGTGATTACGGTGAAAAGACTTGCCCTTTG 119 Query 131 TGTGCTGAGGAGATGGATTTGACTGACCAGCAATTGAAGCCTTGCAAATGTGGCTATCAG 190 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 120 TGTGCAGAGGAGATGGATTTGACTGACCAGCAATTGAAGCCTTGCAAATGTGGCTATCAG 179 Query 191 ATTTGTGTTTGGTGCTGGCACCATATAATGGACATGGCAGAGAAAGATCAATCAGAAGGG 250 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 180 ATTTGTGTTTGGTGCTGGCACCACATAATGGACATGGCAGAGAAAGATCAATCAGAAGGG 239 Query 251 CGCTGTCCAGCTTGCCGCACTCCATATGACAAAGAAAAGATTGTTGGGATGACTGTTGAT 310 ||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||| Sbjct 240 CGCTGTCCAGCTTGCCGTACTCCATATGATAAAGAAAAGATTGTTGGGATGACCGTTGAT 299 Query 311 CAGGAGAGACTGGCCTCTGAAGGCAACATGGATCGCaaaaaaaTACAAAAGTCGAAACCG 370 || ||||||||| |||||||||||||||||||||||||||||| ||||||||| ||| | Sbjct 300 CAAGAGAGACTGACCTCTGAAGGCAACATGGATCGCAAAAAAACACAAAAGTCAAAATTG 359 Query 371 AAATCTTCTGATGGGAGAAAGCCACTAACAAGTGTCCGAGTGGTTCAAAGAAATCTTGTT 430 ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 360 AAATCTTCTGAAGGGAGAAAGCCACTAACAAGTGTCCGAGTGGTTCGAAGAAATCTTGTT 419 Query 431 TACATTGTTGGATTGCCCCTTAATCTAGCAGATGAAGATCTTCTCCAGCGTAAAGAATAT 490 ||||||||||| ||||||||||||||||||||||||||||||| ||||||||| || ||| Sbjct 420 TACATTGTTGGGTTGCCCCTTAATCTAGCAGATGAAGATCTTCCCCAGCGTAATGAGTAT 479 Query 491 TTTGGTCAGTATGGAAAGGTTCTAAAGGTTTCGATGTCCCGAACAGCAACAGGTCTCATC 550 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 480 TTTGGTCAGTATGGAAAGGTTCTAAAGGTTTCCATGTCCCGAACAGCAACAGGTCTCATC 539 Query 551 CAACAGTTTCCTAACAACACATGCAGTGTATACATCACATATGGCAAAGAGGAAGAGGCC 610 |||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct 540 CAACAGTTCCCTAACAACACATGCAGTGTATATATCACTTATGGCAAAGAGGAAGAGGCT 599 Query 611 ATTCGATGTATTCAGTCTGTTCATGGGTTTATCTTGGATGGTAAAGCACTGAAGGCATGT 670 ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 600 GTTCGATGTATTCAATCTGTCCATGGGTTTATCTTGGATGGTAAAGCACTGAAGGCATGT 659 Query 671 TTTGGGACAACCAAGTATTGCCATGCATGGTTGAGAAACGTGGCATGCAACAATCAGGAT 730 ||||||||||| |||||||| ||||||||||| ||||||| | |||||||||||| ||| Sbjct 660 TTTGGGACAACAAAGTATTGTCATGCATGGTTAAGAAACGCGACATGCAACAATCCTGAT 719 Query 731 TGCCTCTATTTGCATGAGGTTGGCTCTCAAGAGGATAGTTTTACAAAAGATGAGATCATA 790 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 720 TGCCTCTATTTGCATGAGGTTGGCTCTCAAGAGGATAGTTTTACAAAAGATGAGATCATA 779 Query 791 TCAGCCCATACAAGAGTTCAGCAAATCACTGGAGCAACAAATACTATGCAATACCGTTCA 850 |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 780 TCAGCCTATACAAGGGTTCAGCAAATCACTGGAGCAACAAATACTATGCAATACCGTTCA 839 Query 851 GGGAGCATGCTACCTCCACCATTGGATGCTTATACCAGTGACAGTTCTACTG-GAAATCC 909 ||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||| Sbjct 840 GGGAGCATGCTACCTCCACCATTGGATGCTTATGGCAGTGACAGTTCTACTGCG-AATCC 898 Query 910 AATTGCAAAAGTTCCTTCTAGTACTTCAGTTAGTGCTCCTAAGAGTTCCCCACCTAGTGG 969 |||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||| Sbjct 899 AATTGCAAAAGTTCCTTCTACTACTTCAGTTAGTGCTCCTAGGAGTTCTCCACCTAGTGG 958 Query 970 GAGCTCGGGTAAATCAACTGCTCTTCCTGCTGCAGCATCATGGGGGGCACGTTTAACAAA 1029 |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 959 GAGCTCTGGTAAATCAACTGCGCTTCCTGCTGCAGCATCATGGGGGGCACGTTTAACAAA 1018 Query 1030 TCAACACTCTTTAGCAACTTCAGCTTTGTCAAATGGATCTTTGGATAATCAAAGATCAAC 1089 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1019 TCAACACTCTTTAGCAACTTCAGCTTTGTCAAATGGATCTTTGGATAATCAAAGATCAAC 1078 Query 1090 ATCAGAGAATGGAACTTTGGCTACGTCTACAGTTGTTACAAAGGCAGCTAATGGGCCTGT 1149 ||||||||||||||||||||||| ||||||||||||| |||| |||||| |||||||||| Sbjct 1079 ATCAGAGAATGGAACTTTGGCTATGTCTACAGTTGTTGCAAATGCAGCTCATGGGCCTGT 1138 Query 1150 ATCCTCTAGTAACAGTCTTCAGAAAGCACCTCTCAAGGAAGAAATTCAATCATTGGCTGA 1209 | |||||||||||| |||||||||| ||||||| ||||||||||||||| |||||||||| Sbjct 1139 AACCTCTAGTAACACTCTTCAGAAACCACCTCTTAAGGAAGAAATTCAAACATTGGCTGA 1198 Query 1210 AAAAAGCAAACCTGGTGTGTTGAAGCCTTTGCAGCAGAAGATTGTGTTGGATCCCGAGTC 1269 ||||||||| ||| | ||||| |||||||||||||||||||||||||||||| | | ||| Sbjct 1199 AAAAAGCAATCCTAGCGTGTTTAAGCCTTTGCAGCAGAAGATTGTGTTGGATTCTGGGTC 1258 Query 1270 CAAGAGAACTACATCACCTAATAGAGACCCTAGTAGCAATCAGATATCCTGTTTAGTAGA 1329 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| Sbjct 1259 CAAGAGAACTACATCACCTAATAGAGATCCTAGTAGCAATCAGATATCCTGTTTAGAAGA 1318 Query 1330 GTCTTCCTACAATAGCAGAGTCATTGACAAGCCTTCTGCTGTTGAGAATTCTCTTGAACA 1389 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1319 ATCTTCCTACAATAGCAGAGTCATTGACAAGCCTTCTGCTGTTGAGAATTCTTTTGAACA 1378 Query 1390 CACAAGTGAAATTGCTGAAGATGTCTTCGATGTTGGTAAATTGTCTGCTGATGTTGCATG 1449 ||||| |||||||||||||||| || |||||||| |||| ||||| |||||||||||||| Sbjct 1379 CACAAATGAAATTGCTGAAGATTTCCTCGATGTTAGTAACTTGTCGGCTGATGTTGCATG 1438 Query 1450 GATGGGGATAACTACAAATTCTAGGGATGAAACCCCTGGTGTTCCAGTGGTTATCGGTAC 1509 ||||||||||||||||||||||||||||||| | |||||||||||||||| ||| ||||| Sbjct 1439 GATGGGGATAACTACAAATTCTAGGGATGAAGCTCCTGGTGTTCCAGTGGCTATTGGTAC 1498 Query 1510 TCATTGTGATCTTGGTTCTATTACACAATCTGATAACGATGTACAAAATCTCGAGCAATG 1569 ||||||||||| |||||||||| |||| |||||||| ||||||||||||| |||| ||| Sbjct 1499 TCATTGTGATCAAGGTTCTATTAGACAACCTGATAACTATGTACAAAATCTTGAGCGATG 1558 Query 1570 TAGAAAACAGTCTCCTACAAACACTTATGCAGAAGCTGACATATCACTGAATGGAATTCA 1629 ||||||| | |||||||||| ||||||||||||||||| |||||||| |||||| ||||| Sbjct 1559 TAGAAAAGATTCTCCTACAACCACTTATGCAGAAGCTGGCATATCACAGAATGGGATTCA 1618 Query 1630 TGGTTCAAGGCCTGAGTGGGATTGGAGATCAGGTTTGCAATCCCAGATAGATGTTAAGGA 1689 |||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||| Sbjct 1619 TGGTTCAAGGCCAGAGTGGGATTGGAGATCAGGTTCGCAATCCCAGATAGATGTCAAGGC 1678 Query 1690 ACCGTTGGAAGTCAATGATTTCTCATCATTCAATAACAACA-GACGTGGTA-TTGCAGAG 1747 || | |||| |||||||||| |||||||||||||||||| | | || ||| |||||||| Sbjct 1679 ACAGGTGGATGTCAATGATTCCTCATCATTCAATAACAATAAG-CG-GGTTGTTGCAGAG 1736 Query 1748 GCTGTTAGCCACTCGACTTCTAAGTTTAGTTCATCAATCTCAATTCTGGATTCAAATCAT 1807 |||||||||||||| |||| || |||||||||||||| |||||||||||||||||||||| Sbjct 1737 GCTGTTAGCCACTCCACTTATATGTTTAGTTCATCAAGCTCAATTCTGGATTCAAATCAT 1796 Query 1808 CTAGCTTCTCGTTCGTTCCAGAACCGGGAAACTTCTTGTGGGATGGATTCAAAAACTGGA 1867 |||||||||||||| ||||||| ||||||||||||| |||||||||||||||| |||||| Sbjct 1797 CTAGCTTCTCGTTCTTTCCAGACCCGGGAAACTTCTGGTGGGATGGATTCAAATACTGGA 1856 Query 1868 TCCTCCTTTGAAATAGGTAGTGATAGATTGCATCTTCCAAATGGATTTTCTGAGAAAGCT 1927 ||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 1857 TCCACCTTTGAAATAGGTAGCGATAGTTTGCATCTTCCAAATGGATTTTCTGAGAAAGCC 1916 Query 1928 ATGTCCAATATGGAGCATTCATTATTTGCTAATGAAGGCAGAAGCAACATTCAGAATACA 1987 || |||||||||||||||||||||||||||||||||||||| ||||||||||||||| || Sbjct 1917 ATATCCAATATGGAGCATTCATTATTTGCTAATGAAGGCAGGAGCAACATTCAGAATGCA 1976 Query 1988 GAGGATGATATCATTTCAAACATTTTAGACTTTGATCCCTGGGATGAATCGTTGACTTCG 2047 ||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct 1977 GAGGATGATATAATTTCGAACATTTTAGACTTTGATCCCTGGGATGAATCCTTGACTTCG 2036 Query 2048 CAACACAATTTTGCAAAATTACTTGGTCAGAGTGATCATAGGGCCAGTACTCTGGAATCT 2107 | |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct 2037 CCACACAATTTTGCAAAATTACTTGGCCAGAGTGATCATAGGGCTAGTACTCTGGAATCT 2096 Query 2108 TCTAACCTCCTAAAGCAACATAATGACCAGTCTAGGTTCTCTTTTGCTCGGCATGAAGAA 2167 |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct 2097 TCTAACCTCCTAAAGCAACATAATGACCAGTCCAGATTCTCTTTTGCTCGGCATGAAGAA 2156 Query 2168 TCAAATAGTCAAGCGTATGACAATAGAAGTTACAGCATATATGGGCAGTTGTCAAGAGAT 2227 ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 2157 TCAAATAATCAAGCGTATGACAATAAAAGTTACAGCATATATGGGCAGTTGTCAAGAGAT 2216 Query 2228 CAGCCTCTTCAAGAGTTTGGAGCGAACCGTGATATGTATCAGGATAAGCTTGGCAGTCAA 2287 ||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct 2217 CAGCCTCTTCAGGAGTTTGGAGTGAACCGTGATATGTATCAGGATAAGCTCGGCAGTCAA 2276 Query 2288 AATGGTTTTGCCTCAAACTATTCCGGTGGATATGAACAATTTGCTACTAGTCCTGGATTA 2347 ||||||||||||||||| ||||| || |||||||||||||||||| |||||||||||||| Sbjct 2277 AATGGTTTTGCCTCAAATTATTCTGGCGGATATGAACAATTTGCTGCTAGTCCTGGATTA 2336 Query 2348 TCTTCTTACAAGAGTCCTGTGGCGAGGACTCAAGTTTCTGCTCCTCCCGGATTTTCTGCT 2407 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 2337 TCTTCTTACAAGAGTCCTGTGGCGAGGACTCAAGTTTCTGCTCCTCCTGGATTTTCTGCT 2396 Query 2408 CCCAACAGGTTACCTCCTCCCGGTTTCTCTTCACATCAAAGAGGCGACCTGTCTTCTGAT 2467 |||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||| Sbjct 2397 CCCAACAGGTTACCTCCTCCGGGTTTCTCTTCACATGAAAGAGCCGACCTGTCTTCTGAT 2456 Query 2468 ATTGCATCAGGAACTCGTTTACTTGACTCAGCCAATTTGTTGAGGAACGCATATCATGTA 2527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2457 ATTGCATCAGGAACTCGTTTACTTGACTCAGCCAATTTGTTGAGGAACGCATATCATGTA 2516 Query 2528 CCACCTCCAAGTGGAAATTTGAATGCTGCAGGAGATATTGAGTTTATTGATCCTGCAATT 2587 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2517 CCCCCTCCAAGTGGAAATTTGAATGCTGCAGGAGATATTGAGTTTATTGATCCTGCAATT 2576 Query 2588 TTAGCTGTTGGAAGGGGAAGACTTCATAATGGGATGGAAACAGCAGACTTTGATTTGAGA 2647 |||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||| Sbjct 2577 TTAGCTGTTGGAAGGGGAAGACTTCACAATGGGATGGAAACAGCAGATTTTGATATGAGA 2636 Query 2648 TCAGGGTTCTCTTCTCAACTGAATTCATTTGATAATGATGCAAGACTCCAATTGTTGGCG 2707 ||||||||||||||||| |||||||||||||| || ||||||||||| |||||||||||| Sbjct 2637 TCAGGGTTCTCTTCTCAGCTGAATTCATTTGAGAACGATGCAAGACTTCAATTGTTGGCG 2696 Query 2708 CAGAGGTCTCTGGCTGCACAACAAGTCAATGGATTTCACGATCCCAGGAACGTAAACAAC 2767 |||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||| Sbjct 2697 CAGAGGTCTCTGGCTGCACAGCAAGTTAATGGATTTCACGATCCCAGGAACGTTAACAAC 2756 Query 2768 TTCTCTTCTTCGTTCTCTGACCCATATGGGATTA---GCTCGAGGCCAACGGATCAAACA 2824 || |||||| | ||||||||||||||||||||| | ||||||| || |||||||||| Sbjct 2757 TTTTCTTCTCCACTCTCTGACCCATATGGGATTATTAGTTCGAGGCTAATGGATCAAACA 2816 Query 2825 CAAGGAACTGGCTTGTCTCCTTTCACACAGCTGCCTAGACAAGCTTCAGCAAATCCATTG 2884 |||||| |||| || ||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct 2817 CAAGGAGCTGGTTTATCTCCTTTCACACAGTTGCCTAGACAAGCTTCACCAAATCCATTG 2876 Query 2885 TTGTCAAATGGACACTGGGATAATAAGTGGAATGAACCACAAAGTGGTAACAATCTTGGG 2944 ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| Sbjct 2877 TTGTCAAATGGACACTGGGATAA---GTGGAATGAACCCCAAAGTGGTAACAATCTTGGG 2933 Query 2945 ATTACCCAGCTTCTAAGGAATGAACGGATGGGTTTTAATGACAACGTTTACAGCGGTTTT 3004 ||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct 2934 ATTGCCCAGCTTCTAAGGAATGAACGGATGGGTTTTAATGACAACGCCTACAGCCGTTTT 2993 Query 3005 GAAGAGCCTAAATTCCGGAGGCCCGGTCCTGGAGATCCGTATAACAGAACATACGGGATT 3064 |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| Sbjct 2994 GAAGAGCCTAAATTCCGGAGGCCCAGTCCTGGAGATCCGTACAACAGAACATACGGGATA 3053 Query 3065 TGATTCTCGGAATTCTTCTT-GGTTGGATTTTCACTTAAGACTGTCTCAAAAGAAGGATT 3123 |||||||| ||||||| || |||||||||||| || ||||| ||||||||||||||||| Sbjct 3054 TGATTCTCAGAATTCTGATTTGGTTGGATTTTCTCTCAAGACCGTCTCAAAAGAAGGATT 3113 Query 3124 -TT-TT-GGCTGATTCCGGTGTTGGGAGATTCATAGTCGAAACTGCTCTGCCTATTTGCC 3180 || || |||||||||| ||||||| ||| ||||||| |||||||||||||||||| ||| Sbjct 3114 GTTGTTTGGCTGATTCCAGTGTTGGAAGAATCATAGTTGAAACTGCTCTGCCTATTAGCC 3173 Query 3181 CATATCAAACCAGACCTTAGAGTCAACAACCGCAAATATCGGCTCCTCCAAAGCAGTTTA 3240 ||||||| |||||||||| || ||||||| ||||| ||| |||||| |||||||||||| Sbjct 3174 CATATCATACCAGACCTTCGAATCAACAATCGCAA-TATTGGCTCCCCCAAAGCAGTTTT 3232 Query 3241 AACTC--AATTGGAGGATA-CCTTACTC-TGTTGGCTTTGTATCAGCAAAAGTTTGATGC 3296 ||||| |||||||||| | |||||| | |||||||||||||||||||||| |||||||| Sbjct 3233 AACTCTCAATTGGAGGACAACCTTAC-CATGTTGGCTTTGTATCAGCAAAAATTTGATGC 3291 Query 3297 TTCAGTGCCTACTCTTGATTCAGAAGGTGATTTTGGTCTACATTTGCATACTATATAAGG 3356 ||||| | | | | | |||||| |||||||||||||||| ||||||| Sbjct 3292 TTCAG-----A------A----G--G-TAATTTTGATCTACATTTGCATACTGTATAAGG 3333 Query 3357 CTGAACTAGTGGAAAAAAT-TGGCGCTATGGTGCATTTACCATTTGTATAGA-G--CTTA 3412 |||||||| |||||||| | |||| | | | | |||||||||||||| | | || Sbjct 3334 CTGAACTACTGGAAAAA-TCTGGCTC---G-T---T--ACCATTTGTATAGATGAGCCTA 3383 Query 3413 CAAGAACTGTATCAGTCTATGCTTT 3437 ||||||| |||||||||||||||| Sbjct 3384 CAAGAACAATATCAGTCTATGCTTT 3408 > Ahg358235 jgi|Araly1|358235|fgenesh1_pg.C_scaffold_8002022 Length=3006 Score = 1090 bits (590), Expect = 0.0 Identities = 1076/1302 (83%), Gaps = 68/1302 (5%) Strand=Plus/Plus Query 98 ATGAGTGATTACGGTGAAAAGACTTGCCCTTTGTGTGCTGAGGAGATGGATTTGACTGAC 157 |||||||| | || || |||||||| || |||||||||| ||||||||| |||| || Sbjct 1 ATGAGTGACCATGGAGAGAAGACTTGTCCACTGTGTGCTGAAGAGATGGATCTGACCGAT 60 Query 158 CAGCAATTGAAGCCTTGCAAATGTGGCTATCAGATTTGTGTTTGGTGCTGGCACCATATA 217 || |||||||||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct 61 CAACAATTGAAGCCTTGCAAATGTGGCTATCAGATTTGTGTTTGGTGCTGGCATCACATA 120 Query 218 ATGGACATGGCAGAGAAAGATCAA-TCAGAAGGGCGCTGTCCAGCTTGCCGCACTCCATA 276 ||||||||||||||||||||||| | ||||||||| ||||||||||| |||||||| || Sbjct 121 GTGGACATGGCAGAGAAAGATCAAAT-AGAAGGGCGTTGTCCAGCTTGTCGCACTCCCTA 179 Query 277 TGACAAAGAAAAGATTGTTGGGATGACTGTTGATCAG-GAGAGACTGGCCTCTGAAGGCA 335 |||||||||||| ||||| ||||||||||||||| | || || |||||||||||||||| Sbjct 180 TGACAAAGAAAAAATTGTAGGGATGACTGTTGATT-GCGACAGTCTGGCCTCTGAAGGCA 238 Query 336 ACATGGATCGCaaaaaaaTACAAAAGTCGAAACCGAAATCTTCTGATGGGAGAAAGC--C 393 | ||||| ||||| || || || ||||| ||| | ||| ||||||| |||||||||| | Sbjct 239 ATATGGAGCGCAAGAAGATCCAGAAGTCAAAATCAAAACCTTCTGAAGGGAGAAAGCAAC 298 Query 394 A-CTAACAAGTGTCCGAGTGGTTCAAAGAAATCTTGTTTACATTGTTGGATTGCCCCTTA 452 | || || ||||| |||||| | || || |||||||| ||||||||||| ||||| |||| Sbjct 299 AACTCACCAGTGTGCGAGTGATCCAGAGGAATCTTGTCTACATTGTTGGGTTGCCTCTTA 358 Query 453 ATCTAGCAGATGAAGATCTTCTCCAGCGTAAAGAATATTTTGGTCAGTATGGAAAGGTTC 512 ||||||| ||||||||||| ||||| | ||||||||||||||||||||||||||| |||| Sbjct 359 ATCTAGCCGATGAAGATCTACTCCAACATAAAGAATATTTTGGTCAGTATGGAAAAGTTC 418 Query 513 TAAAGGTTTCGATGTCCCGAACAGCAACAGGTCTCATCCAACAGTTTCCTAACAACACAT 572 |||||||||||||||||||||||||| | ||| |||||||||| || || || || |||| Sbjct 419 TAAAGGTTTCGATGTCCCGAACAGCATCTGGTGTCATCCAACAATTCCCAAATAATACAT 478 Query 573 GCAGTGTATACATCACATATGGCAAAGAGGAAGAGGCCATTCGATGTATTCAGTCTGTTC 632 |||||||||| || || ||||| |||||||||||||| |||| || |||||| |||||| Sbjct 479 GCAGTGTATATATTACTTATGGAAAAGAGGAAGAGGCTGTTCGCTGCATTCAGGCTGTTC 538 Query 633 ATGGGTTTATCTTGGATGGTAAAGCACTGAAGGCATGTTTTGGGACAACCAAGTATTGCC 692 ||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||| | Sbjct 539 ATGGGTTTATCTTGGATGGTAAACCACTGAAGGCGTGTTTTGGGACAACCAAATATTGTC 598 Query 693 ATGCATGGTTGAGAAACGTGGCATGCAACAATCAGGATTGCCTCTATTTGCATGAGGTTG 752 |||||||| ||||||| ||||||||| ||||| ||||| || |||||||| ||||||| Sbjct 599 ATGCATGGCTGAGAAATGTGGCATGCGTCAATCCTGATTGTCTGTATTTGCACGAGGTTG 658 Query 753 GCTCTCAAGAGGATAGTTTTACAAAAGATGAGATCATATCAGCCCATACAAG-AGT---- 807 | |||||||| ||||| || |||||||||||||||||||||||| ||||||| ||| Sbjct 659 GTTCTCAAGATGATAGCTTCACAAAAGATGAGATCATATCAGCCTATACAAGGAGTAGAG 718 Query 808 T-CAGCAAATCACTGGAGCAACAAATACTATGCAATACCGTTCAGGGAGCATGCTACCTC 866 | || |||||||||||||||||||||| | |||| |||||||||||||||||||||||| Sbjct 719 TTCAACAAATCACTGGAGCAACAAATATTCTGCAGCACCGTTCAGGGAGCATGCTACCTC 778 Query 867 CACCATTGGATGCTTATACCAGTGACAGTTC-TACTGGAAATCCAATTGCAAAAGTTCCT 925 ||||| ||||||||||| |||||||||||| | ||| ||| |||||| ||| |||||| Sbjct 779 CACCACTGGATGCTTATTGCAGTGACAGTTCCT-CTGCAAAACCAATTATAAAGGTTCCT 837 Query 926 TCTAGTACTTCAGTTAGTGCTCCTAAG-AGTTCCCCACCTAGTGGGAGCTCGG-G-T--A 980 || | || | || |||| ||| | | | ||| || ||||||| ||| | || | | | Sbjct 838 TCAACTAGTGCAACAAGTGTTCCCAGGTA-TTCTCCGCCTAGTGAGAG-TGGGAGCTCTA 895 Query 981 --A-ATCAACTGCTCTTCCTGCTGCAGCATCATGGGGGGCACGTTTAACAAATCAACACT 1037 | ||| |||||||||||||||||||| ||||||||| || | || ||| | Sbjct 896 GCAGATCCACTGCTCTTCCTGCTGCAGCGTCATGGGGG--AC----A-CA--TCAG---T 943 Query 1038 CTTTAGCAACTTCAGCTTTG-TCAAATGGATCTT-TGGATA-ATCAAAGATCAACATCAG 1094 ||||||||||||||| || ||||||||||||| | ||| | |||||||||||||||| Sbjct 944 CTTTAGCAACTTCAG-TTACCTCAAATGGATCTTCTC-ATATA-CAAAGATCAACATCAG 1000 Query 1095 -AGAATGGAACTTTGGC-TACGTCTACAGTTGTTACAAAGGCAGCTAATGGGCCTGTATC 1152 | |||||||| || | | ||| | |||||| |||| |||||| ||||||||||||| Sbjct 1001 TA-AATGGAACCTTACCCTTT-TCTGCTGTTGTTGCAAACGCAGCTCATGGGCCTGTATC 1058 Query 1153 CTCTAGTAACAGTCTTCAGAAAGCACC-TCTC--AAGGAAGAAATTCAATCATTGGCT-- 1207 ||| ||| ||| |||| | |||| ||| |||| || ||||||| ||| || || | Sbjct 1059 CTCCAGTGACATTCTT-A-AAAG-ACCATCTCGCAAAGAAGAAAGCCAA--AT-GGTTAT 1112 Query 1208 GAAAAAAG-CAAACCTGGTGTGTTGAAGCCTTTGCAGCAGAA-GATTGTG-TTGGATCCC 1264 | | |||| |||| || | ||||||||||| |||||||| || | ||||| || || Sbjct 1113 GGACAAAGTCAAAACTAGCGTGTTGAAGCCCTTGCAGCATAATG-TTGTGGTT---TCTG 1168 Query 1265 GAGTCCAAGAGAACTACATCACCTAATAGAGACCCTAGTAGCAATCAGAT-ATCCTGTTT 1323 | |||| |||||||||| |||||| ||||||| |||| |||||||| | | |||| ||| Sbjct 1169 G-GTCCGAGAGAACTACCTCACCTGATAGAGATCCTACTAGCAATC-GTTTATCCAGTTC 1226 Query 1324 AGTAGAGTCTTCCTACAATAGCAGAGTCATTGACAAGCCTTC 1365 |||||| ||||||||| | |||||| ||||||| ||||||| Sbjct 1227 AGTAGACTCTTCCTACGGTGGCAGAGACATTGACCAGCCTTC 1268 Score = 625 bits (338), Expect = 8e-178 Identities = 1013/1324 (77%), Gaps = 106/1324 (8%) Strand=Plus/Plus Query 1794 TGGATTCAAATCATCTAGCTTCTCGTTCGTT-CCAGAACC--GGGAAACTTCTTGTGGGA 1850 ||||| |||||||| | ||||||||||| || || | || | |||| ||| ||| || Sbjct 1739 TGGATACAAATCATATGGCTTCTCGTTC-TTCCCTG--CCTTGTGAAATTTCAGGTGTGA 1795 Query 1851 TGGATTCAAAAACTG-GATCCTCCTTT-GAAATAGGTAGTGATAGATTGCATCTTCCAAA 1908 ||||| ||| || | |||| |||| || | ||| ||||||||||||||||||||||| Sbjct 1796 ACGATTC-AAATTTGAGGTCCT-CTTTGGATAGAGGCAGTGATAGATTGCATCTTCCAAA 1853 Query 1909 TGGATTTTCTGAGAAAGCTATGTCCAATATGGAGCATTCAT-TATTTGCTAATGAAGGCA 1967 ||||||| ||||| | | || |||| | |||||||||| | | ||||||||||||| || Sbjct 1854 TGGATTTGGTGAGAGATCCATATCCAGTGTGGAGCATTC-TCTGTTTGCTAATGAAGACA 1912 Query 1968 G-AAGCAACATTCAG-AATACAGAGGATGATAT-CATTTCAAACATTTT---A---GACT 2018 | || ||| | ||| ||| ||||||| ||| | |||| |||||||| | || | Sbjct 1913 GGAA-CAA-AGTCAACAATGTAGAGGATCCTATAC-TTTCGAACATTTTGTCACTCGATT 1969 Query 2019 TTGATCCCTGGGATGAATCGTTGACTTCGCAACACAATTTTGCAAAATTACTTGGTCAGA 2078 ||||||| ||||||||||| |||||||| | |||||||| ||| | ||||| ||| | | Sbjct 1970 TTGATCCATGGGATGAATCCTTGACTTCTCCCCACAATTTGGCAGAGTTACTCGGTGA-A 2028 Query 2079 GT-GATCAT-AGGGCCAGTACTCTGGAATCTTCTAACCTCCTAAAGCAACATAATGACCA 2136 || ||||| | | |||||||| || |||| |||||||||||||||||||| |||| Sbjct 2029 GTTGATCAGCAAT-CTAGTACTCTTAAACCTTCAAACCTCCTAAAGCAACATAACAACCA 2087 Query 2137 GTCTAGGTTCTCTTTTGCTCGGCATGAAGAATCAAATAGTCAAGCGTATGACAAT-AGAA 2195 |||||| || |||||||| ||| |||||||||| | || |||||| ||||||| | |||| Sbjct 2088 GTCTAGATTTTCTTTTGCACGGTATGAAGAATCTAGTAATCAAGCATATGACAGTGAGAA 2147 Query 2196 G-TTA-CAGCATATATGGGCAGTTGTCAAGAGATCAGCCTCTTCAAGAGTTTGGAGCGAA 2253 ||| || | | ||||||||||| ||||||||||| ||| |||| |||| | || || Sbjct 2148 CCTTAGCA-C-T-TATGGGCAGTTTTCAAGAGATCAACCTATTCAGGAGTCAGTAGTGAG 2204 Query 2254 CCGTGATATGTATCAGGA-TAAGCTTGGCAGTCAAAATGGTTTTGCCTCAAACTATTCCG 2312 ||| ||||| |||| | | ||| || || || | |||||| ||||| |||||||| | | Sbjct 2205 CCGAGATATCTATC-GAAATAATCTCGGGAGCCTAAATGGATTTGCTTCAAACTACGCTG 2263 Query 2313 GTGGATATGAACAA-TTTGCTACTAGTCCTGGATTATCTTCTTACAAGAGTCCTGTGGCG 2371 |||||| || | || |||||| |||||||| ||| ||||| |||| | |||||| | Sbjct 2264 GTGGAT-TGGATAACTTTGCTGCTAGTCCTTTATTCTCTTCGCACAAAAATCCTGTTTC- 2321 Query 2372 AGGACTC-AAGTTTCTGCTCCTCCCGGATTTTCTGCTCCCAACAGGTTACCTCCTCCCGG 2430 | ||| | |||||||||| || || ||||||||||||||||||||| |||||||||| || Sbjct 2322 ACGACCCCAAGTTTCTGCACCGCCAGGATTTTCTGCTCCCAACAGGCTACCTCCTCCTGG 2381 Query 2431 TTTCTCTTCACATCAAAGAG-GCGACCTGTCTTCTGATATTGCA-TCAGGAACTCG-TTT 2487 |||||||||||| |||||| | | ||| ||||| |||| ||| | ||||||||| ||| Sbjct 2382 CTTCTCTTCACATGAAAGAGTGGG-CCTATCTTCAGATACCGCACT-AGGAACTCGATTT 2439 Query 2488 ACTTGACTC-AGC-CAATTTGTTGAGGAACGCATATCATGTACCACCTCCAAGT-GGAAA 2544 |||||||| | | | || | | |||||| |||||||| |||||||||||| || || || Sbjct 2440 -CTTGACTCTACCTCCATAT-T-GAGGAATGCATATCAAGTACCACCTCCA-GTTGGTAA 2495 Query 2545 TTTGAATGCTGCAGGAGATATTGAGTTTATTGATCCTGCAATTTTAGCTGTTGGAAGGGG 2604 || |||| |||| | |||||||| ||| | |||||||||||| ||||||||||||| || Sbjct 2496 TTCAAATGGTGCAAGTGATATTGACTTTGTGGATCCTGCAATTCTAGCTGTTGGAAGAGG 2555 Query 2605 AAGACTTCATAATGGGATGGAAACAGCAGACTTTGATTTGAGATCAGGGTTCTCTTCTCA 2664 | || || | ||| |||||||| ||| |||||||||| ||||| || || Sbjct 2556 --G-CT-------GG--T--AAAT-GCAGACTTGGATCTGAGATCAGGATTCTCATCACA 2600 Query 2665 ACTGAATTCATTTGATAATGATGCAAGACTCCA-ATTGTTG-GCGCAG-AGGTCTCTGGC 2721 ||||||||| ||||| || || || | ||||| || |||| | ||| || || ||| | Sbjct 2601 ACTGAATTCTTTTGAAAACGAAACAGGGCTCCATAT-GTTGAGA-CAGCAG-TCCCTGTC 2657 Query 2722 T---GCACA--A-CAAGTCAATGGATTTCA-C--GATCCCAGGAACGTAAACAACTTCTC 2772 | ||||| | ||||| ||||| ||||| | |||| ||| |||||| | | | | Sbjct 2658 TTCTGCACACCAACAAGTTAATGGGTTTCATCATGATCTCAGAAACGTAT-C---T-C-C 2711 Query 2773 TTCTTCGTTCTCTGACCCATATGGGATT-AGCTCGAGGCCAACGGATCAAACACAAGGAA 2831 ||| | || | || || ||||| ||| ||| | |||| || |||||||||||| |||| Sbjct 2712 TTCA-C-TTAAC-GATCCTTATGG-ATTTAGCGCAAGGCTAATGGATCAAACACAGGGAA 2767 Query 2832 CTGGCTTGTCTCCTTTCACACAGCTGCCTAG--A-CAAGCTTCAGCAAATCCATTGTTGT 2888 | |||| ||||||||| ||||||| || || | ||| | || || ||| || | ||| Sbjct 2768 GTAGCTTATCTCCTTTCTCACAGCTCCCAAGGCAACAACCATCTGCGAATTCAATCTTGC 2827 Query 2889 CAAATGGACACTGGGATAATAAGTGGAATGAACCACAAAGTG-GTAACAATCTTGGGATT 2947 | ||||| ||||||||||| |||||||||| ||||||| | |||||| | || || Sbjct 2828 CTAATGGTCACTGGGATAA---GTGGAATGAAGGGCAAAGTGTG-AACAATATAGGCATG 2883 Query 2948 ACCCAGCTTCTAAGGAATGAACGGATGGGTTTTAATGACAACGTT-TACAGC---GGTTT 3003 || | ||||| |||||||||||| |||||||||||| | | || |||| | || | Sbjct 2884 GCCAATCTTCTTAGGAATGAACGGCTGGGTTTTAATGGGAGC-TTGTACAACAACGGATA 2942 Query 3004 TGAAGAGCCTAAATTCCGGAGGCCCGGTCCTGGAGATCCGTATAACAGAACATACGGGAT 3063 |||||| | |||||||||| || ||||||||||| ||||||||| ||||| ||||| Sbjct 2943 TGAAGAATCGAAATTCCGGATTCCAAGTCCTGGAGATGTGTATAACAGGACATATGGGAT 3002 Query 3064 TTGA 3067 |||| Sbjct 3003 TTGA 3006 > Ahg948121 jgi|Araly1|948121|scaffold_800008.1 Length=698 Score = 828 bits (448), Expect = 0.0 Identities = 587/655 (90%), Gaps = 5/655 (1%) Strand=Plus/Plus Query 2416 GTTACCTCCTCCC-GGTTTCTCTTCACATCAAAGAGGCGACCTGTCTTCTGATATTGCAT 2474 ||||||||| ||| ||||||||||||||| || ||| |||||||||||||||||||||| Sbjct 29 GTTACCTCC-CCCTGGTTTCTCTTCACATGAACGAGCCGACCTGTCTTCTGATATTGCAC 87 Query 2475 CAGGAACTCGTTTACTTGACTCAGCCAATTTGTTGAGGAACGCATATCATGTACCACCTC 2534 |||| ||||| || |||||||| ||| |||||||||||| |||||||||| ||||||| Sbjct 88 CAGGGACTCGCTTGCTTGACTCGGCCTCCTTGTTGAGGAACACATATCATGTCCCACCTC 147 Query 2535 CAAGTGGAAATTTGAATGCTGCAGGAGATATTGAGTTTATTGATCCTGCAATTTTAGCTG 2594 ||||||| ||||||| || |||| ||||||||||||||||||||||||||||||||||| Sbjct 148 CAAGTGGCAATTTGACCGCCGCAGCAGATATTGAGTTTATTGATCCTGCAATTTTAGCTG 207 Query 2595 TTGGAAGGGGAAGACTTCATAATGGGATGGAAACAGCAGACTTTGATTTGAGATCAGGGT 2654 ||||||||||||||||||| | |||||||||||||||||| |||||| |||||||||||| Sbjct 208 TTGGAAGGGGAAGACTTCACAGTGGGATGGAAACAGCAGATTTTGATATGAGATCAGGGT 267 Query 2655 TCTCTTCTCAACTGAATTCATTTGATAATGATGCAAGACTCCAATTGTTGGCGCAGAGGT 2714 |||||||||| ||||||| ||||| || ||||||||||| ||||||||||||||||||| Sbjct 268 TCTCTTCTCAGTTGAATTCCTTTGAAAACGATGCAAGACTTCAATTGTTGGCGCAGAGGT 327 Query 2715 CTCTGGCTGCACAACAAGTCAATGGATTTCACGATCCCAGGAACGTAAACAACTTCTCTT 2774 ||||||||||||||||||||||||||||||| | || || |||||| |||||||| |||| Sbjct 328 CTCTGGCTGCACAACAAGTCAATGGATTTCATGTTCTCATGAACGTTAACAACTTTTCTT 387 Query 2775 CTTCGTTCTCTGACCCATATGGGATTAGCTCGAGGCCAACGGATCAAACACAAGGAACTG 2834 || | |||||||||||||||| ||||| || |||| || |||||||||||||||||||| Sbjct 388 CTCCACTCTCTGACCCATATGGAATTAGTTCCAGGCTAATGGATCAAACACAAGGAACTG 447 Query 2835 GCTTGTCTCCTTTCACACAGCTGCCTAGACAAGCTTCAGCAAATCCATTGTTGTCAAATG 2894 |||| |||||||||||||| | ||||||||||||||| ||||||| ||||||||||||| Sbjct 448 GCTTATCTCCTTTCACACAATTACCTAGACAAGCTTCACCAAATCCGTTGTTGTCAAATG 507 Query 2895 GACACTGGGATAATAAGTGGAATGAACCACAAAGTGGTAACAATCTTGGGATTACCCAGC 2954 ||||||||||||| |||||||||| | |||||||||||||||||||||| | ||||| Sbjct 508 GACACTGGGATAA---GTGGAATGAAACTCAAAGTGGTAACAATCTTGGGACCAACCAGC 564 Query 2955 TTCTAAGGAATGAACGGATGGGTTTTAATGACAACGTTTACAGCGGTTTTGAAGAGCCTA 3014 ||||||||||||| |||||||| ||||||||||| || |||||| ||||||||||||||| Sbjct 565 TTCTAAGGAATGACCGGATGGGATTTAATGACAATGTCTACAGCCGTTTTGAAGAGCCTA 624 Query 3015 AATTCCGGAGGCCCGGTCCTGGAGATCCGTATAACAGAACATACGGGATTTGATT 3069 | ||||||||||||||||||||||||| ||| |||||||| || ||||||||||| Sbjct 625 AGTTCCGGAGGCCCGGTCCTGGAGATCAGTACAACAGAACTTATGGGATTTGATT 679 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 134267117544 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5