BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G46210.1
Length=1062
Score E
Sequences producing significant alignments: (Bits) Value
Ahg485002 jgi|Araly1|485002|fgenesh2_kg.5__994__AT3G46210.3 1367 0.0
Ahg900231 jgi|Araly1|900231|Al_scaffold_0004_881 370 1e-101
Ahg923309 jgi|Araly1|923309|scaffold_104590.1 296 2e-79
Ahg915133 jgi|Araly1|915133|Al_scaffold_0009_102 261 8e-69
Ahg491986 jgi|Araly1|491986|fgenesh2_kg.7__1419__AT2G07110.1 204 1e-51
Ahg497144 jgi|Araly1|497144|fgenesh2_kg.9__109__AT2G07110.1 171 1e-41
Ahg475442 jgi|Araly1|475442|fgenesh2_kg.2__572__AT2G07110.1 165 6e-40
Ahg320572 jgi|Araly1|320572|fgenesh1_pm.C_scaffold_4000629 165 6e-40
Ahg490148 jgi|Araly1|490148|fgenesh2_kg.6__3282__AT2G07110.1 159 3e-38
Ahg484800 jgi|Araly1|484800|fgenesh2_kg.5__792__AT2G07110.1 134 2e-30
Ahg908620 jgi|Araly1|908620|Al_scaffold_0002_1701 130 2e-29
Ahg494696 jgi|Araly1|494696|fgenesh2_kg.8__512__AT2G07110.1 130 2e-29
Ahg891703 jgi|Araly1|891703|Al_scaffold_0007_3689 124 1e-27
Ahg474556 jgi|Araly1|474556|fgenesh2_kg.1__4510__AT2G07110.1 124 1e-27
Ahg356803 jgi|Araly1|356803|fgenesh1_pg.C_scaffold_8000590 91.6 1e-17
Ahg917562 jgi|Araly1|917562|Al_scaffold_0008_2313 87.9 1e-16
> Ahg485002 jgi|Araly1|485002|fgenesh2_kg.5__994__AT3G46210.3
Length=921
Score = 1367 bits (740), Expect = 0.0
Identities = 879/940 (94%), Gaps = 34/940 (4%)
Strand=Plus/Plus
Query 114 ATTGTAGCAATGGAGATTGATAGAGAAGATGGAAGAACACCAAATCAGCTGAGACCTCTT 173
|||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 6 ATTGGAGCAATGGAGATTGATAGAGAAGATGGAAGAACGCCGAATCAGCTGAGACCTCTT 65
Query 174 GCTTGTTCCCGTAATATCCTTCATCGTCCTCATGGCTCTGCTAGTTGGTCACAAGGGGAT 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 66 GCTTGTTCCCGTAATATCCTTCATCGTCCTCATGGCTCTGCTAGTTGGTCACAAGGGGAT 125
Query 234 ACAAAAGTTCTAGCTGCGGTTTATGGACCTAAAGCAGGAACGAAAAAGAACGAAAATGCT 293
|| |||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||
Sbjct 126 ACCAAAGTTCTAGCTGCAGTTTATGGACCTAAAGCAGGAACGAAGAAGAATGAAAATGCT 185
Query 294 GAGAAGGCTTGTTTTGAAGTCATATGGAAGCCTAAATCCGGGCAGATTGGAAAAGTTGAA 353
|||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||
Sbjct 186 GAGAAGGCTTGTTTTGAAGTCATATGGAAGCCTAAAACTGGGCAGATTGGAAAAGTAGAA 245
Query 354 AAGGAGTATGAGATGATATTGAAAAGGACGATACAGAGTATTTGTGTTTTGACTGTTAAT 413
|||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||
Sbjct 246 AAGGAGTATGAGATGATAATGAAAAGGACAATACAGAGTATTTGTGTTTTGACAGTTAAT 305
Query 414 CCAAATACCACCACCTCAGTGATAATTCAGGTTGTGCATGATGATGGTTCTCTTCTACCA 473
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 306 CCAAATACCACCACCTCAGTGATAATTCAGGTTGTACATGATGATGGTTCTCTTCTACCG 365
Query 474 TGTGCGATAAATGCAGCATGTGCAGCGCTTGTCGATGCAGGAATCCCTATGAAGCATCTG 533
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 366 TGTGCGATAAATGCAGCATGTGCAGCGCTTGTCGATGCAGGAATCCCTATGAAGCATCTC 425
Query 534 GCTGTTGCTATATGCTGTTGCCTGGCTGAGAATGGATATCTCGTACTCGATCCAAACAAG 593
|||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 426 GCTGTTGCTATATGTTGTTGCCTGGCTGATAATGGATATCTCGTACTCGATCCAAACAAG 485
Query 594 CTTGAAGAAAAGAAAATGACGGCCTTTGCTTATTTAGTCTTTCCAAATACAACTCTCTCT 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 486 CTTGAAGAAAAGAAAATGACGGCCTTTGCTTATTTAGTCTTTCCAAATACAACTCTCTCT 545
Query 654 GTTCTTCCGGAAGGGTCATCAGTAGCGGAAGGCGAGCCAGTAGAGCATGGGATCATCACA 713
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 546 GTTCTTCCGGAAGGATCATCAGTAGCGGAAGGCGAGCCAGTAGAGCATGGGATCATTACA 605
Query 714 TCAATTACACATGGAGTAATGTCAGTGGACGATTATTTCCTGTGTGTAGAGAACGGCCGT 773
||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 606 TCAGTTACCCATGGAGTAATGTCAGTGGACGATTATTTCCTGTGTGTAGAGAACGGCCGT 665
Query 774 GCTGCTACGGCTAGTTTATCTGCATTTTTTAGAAAGAACTTCCAACAAAG---------T 824
|||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 666 GCTGCTACGGCTAGTTTATCTGCATTTTTTAGAAAGAACTTCCAACAAAGCCAAAAAGAT 725
Query 825 TCATCCAAGGCTGGGTAAA-AGCACAAATTCATAATGGTTTGCATGAGATTTTGAAACGG 883
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 726 TCATCCAAGGCCGGGTAAAGAGCACAAATTCATAATGGTTTGCATGAGATTTTGA--CGG 783
Query 884 TTTCATATTACTCCTGTTGTAGCTTTGATAGAATCCTTGTCGTCTATGTGTCTAATCAAA 943
||||||||| |||||||||||||||| ||||||||||| ||||| |||||||||||||||
Sbjct 784 TTTCATATTTCTCCTGTTGTAGCTTTTATAGAATCCTTATCGTCGATGTGTCTAATCAAA 843
Query 944 AATCAAAAGCTAGTGGCCTATTATCTAGTATCATTAGATATGTGAACAGATGAACCTCGT 1003
| || |||| || | || | | ||||||||||||||||||||||||
Sbjct 844 A-TC------TAGT-----AT---C--GT-T-A---GATATGTGAACAGATGAACCTCGT 881
Query 1004 ATCTTTAATACAAATGGTAGCCATGGTCAGAGCTATTGAT 1043
||||||||||||||||||||||||||||||||||||||||
Sbjct 882 ATCTTTAATACAAATGGTAGCCATGGTCAGAGCTATTGAT 921
> Ahg900231 jgi|Araly1|900231|Al_scaffold_0004_881
Length=423
Score = 370 bits (200), Expect = 1e-101
Identities = 226/239 (95%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 226 AAGGGGATACAAAAGTTCTAGCTGCGGTTTATGGACCTAAAGCAGGAACGAAAAAGAACG 285
||||||||||||||||||||||||| || |||||||| |||||||||||||| |||||||
Sbjct 86 AAGGGGATACAAAAGTTCTAGCTGCAGTATATGGACCAAAAGCAGGAACGAAGAAGAACG 145
Query 286 AAAATGCTGAGAAGGCTTGTTTTGAAGTCATATGGAAGCCTAAATCCGGGCAGATTGGAA 345
|||||| ||||||||||||||||||||||||||||||||||||| |||| || |||||||
Sbjct 146 AAAATGATGAGAAGGCTTGTTTTGAAGTCATATGGAAGCCTAAAACCGGACAAATTGGAA 205
Query 346 AAGTTGAAAAGGAGTATGAGATGATATTGAAAAGGACGATACAGAGTATTTGTGTTTTGA 405
|||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct 206 AAGTTGAAAAGGAGTATGAGATGATACTGAAAAGGACGATGCAGAGTATTTGTGTTTTGA 265
Query 406 CTGTTAATCCAAATACCACCACCTCAGTGATAATTCAGGTTGTGCATGATGATGGTTCT 464
| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct 266 CAGTTAATCCAAATACCACCACCTCAGTGATAATTCAAGTTGTACATGATGATGGTTCT 324
> Ahg923309 jgi|Araly1|923309|scaffold_104590.1
Length=522
Score = 296 bits (160), Expect = 2e-79
Identities = 208/232 (90%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 111 AGTATTGTAGCAATGGAGATTGATAGAGAAGATGGAAGAACACCAAATCAGCTGAGACCT 170
||||||| |||||| |||||||| ||||||||||| ||||| || ||||| ||||||||
Sbjct 80 AGTATTGGAGCAATTGAGATTGACAGAGAAGATGGCAGAACTCCGGATCAGTTGAGACCT 139
Query 171 CTTGCTTGTTCCCGTAATATCCTTCATCGTCCTCATGGCTCTGCTAGTTGGTCACAAGGG 230
||||||||||| ||||| ||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 140 CTTGCTTGTTCTCGTAACATCCTTCATCGTCCTCATGGCTCTGCTAGCTGGTCGCAAGGG 199
Query 231 GATACAAAAGTTCTAGCTGCGGTTTATGGACCTAAAGCAGGAACGAAAAAGAACGAAAAT 290
|||||||||||| ||||||| ||||||||||||||| | ||||| | |||||||| ||
Sbjct 200 GATACAAAAGTTTTAGCTGCAGTTTATGGACCTAAACCGGGAACTAGGAAGAACGAGAAC 259
Query 291 GCTGAGAAGGCTTGTTTTGAAGTCATATGGAAGCCTAAATCCGGGCAGATTG 342
||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct 260 CCTGAGAAGGCTTGCTTTGAAGTCATATGGAAGCCTAAATCAGGGCAGATTG 311
Score = 257 bits (139), Expect = 1e-67
Identities = 177/195 (91%), Gaps = 4/195 (2%)
Strand=Plus/Plus
Query 630 GTCTTTCCAAATACAACTCTCTCTGTTCTTCCGGAAGGGTCATCAGTAGCGGAAGGCGAG 689
|||||||||||||||||||||||||| ||||||||||| |||||| ||| ||||||||||
Sbjct 311 GTCTTTCCAAATACAACTCTCTCTGTGCTTCCGGAAGGATCATCACTAGTGGAAGGCGAG 370
Query 690 CCAGTAGA-GCATGGGATCATCACATCAATTACACATGGAGTAATGTCAGTGGACGATTA 748
|| ||||| | |||||||||| |||| | |||| ||||||||||||||||||||||||||
Sbjct 371 CCGGTAGAAG-ATGGGATCATTACATTAGTTACCCATGGAGTAATGTCAGTGGACGATTA 429
Query 749 TTTCCTG-TGTGTAGAGAACGGCCGTGCTGCTACGGCTAGTTTATCTGCATTTTTTAGAA 807
|||| || |||||||||||||| ||||||||||| |||||||||||||| |||||||| |
Sbjct 430 TTTC-TGGTGTGTAGAGAACGGTCGTGCTGCTACAGCTAGTTTATCTGCCTTTTTTAGGA 488
Query 808 AGAACTTCCAACAAA 822
||||||||||| |||
Sbjct 489 AGAACTTCCAATAAA 503
> Ahg915133 jgi|Araly1|915133|Al_scaffold_0009_102
Length=183
Score = 261 bits (141), Expect = 8e-69
Identities = 171/185 (92%), Gaps = 3/185 (2%)
Strand=Plus/Plus
Query 159 CAGCTGAGACCTCTTGCTTGTTCCCGTAATATCCTTCATCGTCCTCATGGCTCTGCTAGT 218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 CAGCTGAGACCTCTTGCTTGTTCCCGTAATATCCTTCATCGTCCTCATGGCTCTGCTAGT 60
Query 219 TGGTCACAAGGGGATACAAAAGTTCTAGCTGCGGTTTATGGACCTAAAGCAGGAACGAAA 278
|||||| ||||| ||||||||||| || |||| | || ||||||||||||||||||||
Sbjct 61 TGGTCAGAAGGG-ATACAAAAGTTATACCTGCAGAATACGGACCTAAAGCAGGAACGAAG 119
Query 279 AAGAACGAAAATGCTGAGAAGGCTTGTTTTGAAGTCATATGGAAGCCT-AAATCCGGGCA 337
|||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||| |
Sbjct 120 AAGAACGAAAATGCTGAGAAGGCTTGTTTTGAAGTCATATGGAAACCTTAAA-CCGGATA 178
Query 338 GATTG 342
|||||
Sbjct 179 GATTG 183
> Ahg491986 jgi|Araly1|491986|fgenesh2_kg.7__1419__AT2G07110.1
Length=378
Score = 204 bits (110), Expect = 1e-51
Identities = 203/246 (83%), Gaps = 13/246 (5%)
Strand=Plus/Plus
Query 227 AGGGGATACAAAAGTTCTAGCTGCGGTTTATGGACCTAAAGCAGGAACGAAAAAGAACGA 286
|||||||||||||||||||||||| || |||||||||||||||| ||| ||||||||
Sbjct 35 AGGGGATACAAAAGTTCTAGCTGCACAATACGGACCTAAAGCAGGAAAGAAGAAGAACGA 94
Query 287 AAATGCTGAGAAGGCTTGTTTTGAAGT---CAT-ATGGAAGCCTAAATCCGG-GCA-GA- 339
||||||||||||||||||||||||| | ||| | ||| || | | | || ||
Sbjct 95 AAATGCTGAGAAGGCTTGTTTTGAATTTTTCATCA-GGAGGCGTGTTTT-GTTGCTTGAG 152
Query 340 T-TGGA--AAAGTTGAAAAGGAGTATGAGATGATATTGAAAAGGACGATACAGAGTATTT 396
| || | |||||||||| ||||||||| | |||| |||||| |||| |||||| |||||
Sbjct 153 TATG-ACCAAAGTTGAAAGGGAGTATGAAACGATACTGAAAAAGACGCTACAGAATATTT 211
Query 397 GTGTTTTGACTGTTAATCCAAATACCACCACCTCAGTGATAATTCAGGTTGTGCATGATG 456
|||||||||| ||| | |||||||| ||||||||||||||||||||||||| |||||||
Sbjct 212 GTGTTTTGACAGTTGTTACAAATACCGCCACCTCAGTGATAATTCAGGTTGTACATGATG 271
Query 457 ATGGTT 462
|||||
Sbjct 272 GTGGTT 277
> Ahg497144 jgi|Araly1|497144|fgenesh2_kg.9__109__AT2G07110.1
Length=312
Score = 171 bits (92), Expect = 1e-41
Identities = 115/126 (91%), Gaps = 1/126 (1%)
Strand=Plus/Plus
Query 340 TTG-GAAAAGTTGAAAAGGAGTATGAGATGATATTGAAAAGGACGATACAGAGTATTTGT 398
||| |||||||||||| ||||||||| | |||| ||||||||||||||||||||||||||
Sbjct 145 TTGAGAAAAGTTGAAAGGGAGTATGAAACGATACTGAAAAGGACGATACAGAGTATTTGT 204
Query 399 GTTTTGACTGTTAATCCAAATACCACCACCTCAGTGATAATTCAGGTTGTGCATGATGAT 458
|||||||| ||| || ||||||||||||||||||||||||||||||||| ||||||| |
Sbjct 205 GTTTTGACAGTTGTTCTAAATACCACCACCTCAGTGATAATTCAGGTTGTACATGATGGT 264
Query 459 GGTTCT 464
||||||
Sbjct 265 GGTTCT 270
Score = 132 bits (71), Expect = 6e-30
Identities = 82/87 (94%), Gaps = 2/87 (2%)
Strand=Plus/Plus
Query 258 GGACCTAAAGCAGGAACGAAAAAGAACGAAAATGCTGAGAAGGCTTGTTTTGAAGTCATA 317
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 12 GGACCTAAAGCAGGAACGAAGAAGAACGAAAATGCTGAGAAGGCTTGTTTTGAAGTCATA 71
Query 318 TGGAAGCCT-AAATCCGGGCAGATTGG 343
||||||||| ||| |||| |||||||
Sbjct 72 TGGAAGCCTTAAA-CCGGATAGATTGG 97
> Ahg475442 jgi|Araly1|475442|fgenesh2_kg.2__572__AT2G07110.1
Length=423
Score = 165 bits (89), Expect = 6e-40
Identities = 114/126 (90%), Gaps = 1/126 (1%)
Strand=Plus/Plus
Query 340 TTG-GAAAAGTTGAAAAGGAGTATGAGATGATATTGAAAAGGACGATACAGAGTATTTGT 398
||| |||||||||||| ||||||||| | |||| ||||||||||| ||||||||||||||
Sbjct 199 TTGAGAAAAGTTGAAAGGGAGTATGAAACGATACTGAAAAGGACGCTACAGAGTATTTGT 258
Query 399 GTTTTGACTGTTAATCCAAATACCACCACCTCAGTGATAATTCAGGTTGTGCATGATGAT 458
|||||||| ||| | |||||||||||||||||||||||||||||||||| ||||||| |
Sbjct 259 GTTTTGACAGTTGTTTCAAATACCACCACCTCAGTGATAATTCAGGTTGTACATGATGGT 318
Query 459 GGTTCT 464
||||||
Sbjct 319 GGTTCT 324
Score = 156 bits (84), Expect = 4e-37
Identities = 107/118 (91%), Gaps = 2/118 (2%)
Strand=Plus/Plus
Query 227 AGGGGATACAAAAGTTCTAGCTGCGGTTTATGGACCTAAAGCAGGAACGAAAAAGAACGA 286
||| |||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 35 AGGAGATACAAAAGTTCTAGCTGCACAATACGGACCTAAAGCAGGAACGAAAAAGAACGA 94
Query 287 AAATGCTGAGAAGGCTTGTTTTGAAGTCATATGGAAGCCT-AAATCCGGGCAGATTGG 343
||||||||||||| |||||||||||||||||||||||||| ||| |||| |||||||
Sbjct 95 AAATGCTGAGAAGACTTGTTTTGAAGTCATATGGAAGCCTTAAA-CCGGATAGATTGG 151
> Ahg320572 jgi|Araly1|320572|fgenesh1_pm.C_scaffold_4000629
Length=387
Score = 165 bits (89), Expect = 6e-40
Identities = 114/126 (90%), Gaps = 1/126 (1%)
Strand=Plus/Plus
Query 340 TTG-GAAAAGTTGAAAAGGAGTATGAGATGATATTGAAAAGGACGATACAGAGTATTTGT 398
||| |||||||||||| ||||||||| | |||| ||||||||||| ||||||||||||||
Sbjct 163 TTGAGAAAAGTTGAAAGGGAGTATGAAACGATACTGAAAAGGACGCTACAGAGTATTTGT 222
Query 399 GTTTTGACTGTTAATCCAAATACCACCACCTCAGTGATAATTCAGGTTGTGCATGATGAT 458
|||||||| ||| |||||||||||||||||||||||||||||||||||| |||| || |
Sbjct 223 GTTTTGACAGTTGTTCCAAATACCACCACCTCAGTGATAATTCAGGTTGTACATGTTGGT 282
Query 459 GGTTCT 464
||||||
Sbjct 283 GGTTCT 288
> Ahg490148 jgi|Araly1|490148|fgenesh2_kg.6__3282__AT2G07110.1
Length=399
Score = 159 bits (86), Expect = 3e-38
Identities = 113/126 (90%), Gaps = 1/126 (1%)
Strand=Plus/Plus
Query 340 TTG-GAAAAGTTGAAAAGGAGTATGAGATGATATTGAAAAGGACGATACAGAGTATTTGT 398
||| |||||||||||| ||||||||| | |||| ||||||||||| |||||| |||||||
Sbjct 175 TTGAGAAAAGTTGAAAGGGAGTATGAAACGATACTGAAAAGGACGCTACAGAATATTTGT 234
Query 399 GTTTTGACTGTTAATCCAAATACCACCACCTCAGTGATAATTCAGGTTGTGCATGATGAT 458
|||||||| ||| |||||||||||||||||||||||||||||| ||||| ||||||| |
Sbjct 235 GTTTTGACAGTTGTTCCAAATACCACCACCTCAGTGATAATTCAAGTTGTACATGATGGT 294
Query 459 GGTTCT 464
||||||
Sbjct 295 GGTTCT 300
> Ahg484800 jgi|Araly1|484800|fgenesh2_kg.5__792__AT2G07110.1
Length=384
Score = 134 bits (72), Expect = 2e-30
Identities = 102/116 (88%), Gaps = 3/116 (3%)
Strand=Plus/Plus
Query 229 GGGATACAAAAGTTCTAGCTGCGGTTTATGGACCTAAAGCAGGAACGAAAAAGAACGAAA 288
|||||||||||||| ||||||| | || ||||||||||||||||||| |||||||||
Sbjct 56 GGGATACAAAAGTTATAGCTGCAGAATACAGACCTAAAGCAGGAACGAAGGAGAACGAAA 115
Query 289 ATGCTGAGAAGGCTTGTTTTGAAGTCATATGGAAGCCT-AAATCCGGGCAGATTGG 343
|||||||||||||||||||||||||| ||||||| ||| ||| |||| |||||||
Sbjct 116 ATGCTGAGAAGGCTTGTTTTGAAGTC-TATGGAAACCTTAAA-CCGGATAGATTGG 169
> Ahg908620 jgi|Araly1|908620|Al_scaffold_0002_1701
Length=369
Score = 130 bits (70), Expect = 2e-29
Identities = 80/85 (94%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 259 GACCTAAAGCAGGAACGAAAAAGAACGAAAATGCTGAGAAGGCTTGTTTTGAAGTCATAT 318
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 13 GACCTAAAGCAGGAACGAAGAAGAACGAAAATGCTGAGAAGGCTTGTTTTGAAGTCATAT 72
Query 319 GGAAGCCTAAATCCGGGCAGATTGG 343
|||||||| || |||| |||||||
Sbjct 73 GGAAGCCTTAAGCCGGATAGATTGG 97
> Ahg494696 jgi|Araly1|494696|fgenesh2_kg.8__512__AT2G07110.1
Length=369
Score = 130 bits (70), Expect = 2e-29
Identities = 80/85 (94%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 259 GACCTAAAGCAGGAACGAAAAAGAACGAAAATGCTGAGAAGGCTTGTTTTGAAGTCATAT 318
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 13 GACCTAAAGCAGGAACGAAGAAGAACGAAAATGCTGAGAAGGCTTGTTTTGAAGTCATAT 72
Query 319 GGAAGCCTAAATCCGGGCAGATTGG 343
|||||||| || |||| |||||||
Sbjct 73 GGAAGCCTTAAGCCGGATAGATTGG 97
> Ahg891703 jgi|Araly1|891703|Al_scaffold_0007_3689
Length=255
Score = 124 bits (67), Expect = 1e-27
Identities = 80/86 (93%), Gaps = 2/86 (2%)
Strand=Plus/Plus
Query 259 GACCTAAAGCAGGAACGAAA-AAGAACGAAAATGCTGAGAAGGCTTGTTTTGAAGTCATA 317
|||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct 13 GACCTAAAGCAGGAAC-AAAGAAGAACGAAAATGCTGAGAAGGCTTGTTTTGAAGTCATA 71
Query 318 TGGAAGCCTAAATCCGGGCAGATTGG 343
||||||||| || |||| |||||||
Sbjct 72 TGGAAGCCTTAAGCCGGATAGATTGG 97
> Ahg474556 jgi|Araly1|474556|fgenesh2_kg.1__4510__AT2G07110.1
Length=369
Score = 124 bits (67), Expect = 1e-27
Identities = 80/86 (93%), Gaps = 2/86 (2%)
Strand=Plus/Plus
Query 259 GACCTAAAGCAGGAACGAAA-AAGAACGAAAATGCTGAGAAGGCTTGTTTTGAAGTCATA 317
|||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct 13 GACCTAAAGCAGGAAC-AAAGAAGAACGAAAATGCTGAGAAGGCTTGTTTTGAAGTCATA 71
Query 318 TGGAAGCCTAAATCCGGGCAGATTGG 343
||||||||| || |||| |||||||
Sbjct 72 TGGAAGCCTTAAGCCGGATAGATTGG 97
> Ahg356803 jgi|Araly1|356803|fgenesh1_pg.C_scaffold_8000590
Length=306
Score = 91.6 bits (49), Expect = 1e-17
Identities = 49/49 (100%), Gaps = 0/49 (0%)
Strand=Plus/Minus
Query 158 TCAGCTGAGACCTCTTGCTTGTTCCCGTAATATCCTTCATCGTCCTCAT 206
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 49 TCAGCTGAGACCTCTTGCTTGTTCCCGTAATATCCTTCATCGTCCTCAT 1
> Ahg917562 jgi|Araly1|917562|Al_scaffold_0008_2313
Length=195
Score = 87.9 bits (47), Expect = 1e-16
Identities = 47/47 (100%), Gaps = 0/47 (0%)
Strand=Plus/Minus
Query 160 AGCTGAGACCTCTTGCTTGTTCCCGTAATATCCTTCATCGTCCTCAT 206
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 47 AGCTGAGACCTCTTGCTTGTTCCCGTAATATCCTTCATCGTCCTCAT 1
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 39533464929
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5