BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G46490.1 Length=993 Score E Sequences producing significant alignments: (Bits) Value Ahg485020 jgi|Araly1|485020|fgenesh2_kg.5__1012__AT3G46490.1 1592 0.0 Ahg359346 jgi|Araly1|359346|fgenesh1_pg.C_scaffold_132000003 1153 0.0 Ahg485021 jgi|Araly1|485021|fgenesh2_kg.5__1013__AT3G46500.1 798 0.0 Ahg473661 jgi|Araly1|473661|fgenesh2_kg.1__3615__AT1G35190.1 728 0.0 Ahg937350 jgi|Araly1|937350|scaffold_501541.1 451 4e-126 > Ahg485020 jgi|Araly1|485020|fgenesh2_kg.5__1012__AT3G46490.1 Length=996 Score = 1592 bits (862), Expect = 0.0 Identities = 953/997 (96%), Gaps = 5/997 (1%) Strand=Plus/Plus Query 1 ATGGAGAATAAAACTGAGGAAG---AGGTATCAATCATCAAAGTTTCTTCCCTTACTTGC 57 |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct 1 ATGGAGAATAAAACTGAGGAAGATAAGGTATCAATCATCAAAGTTTCTGCCCTTACTTGC 60 Query 58 ATCGATCTCGACAACTCTGATCTTCATCAATCAGCTGTTTTACTCAAGCAGGCATGTCTC 117 || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 61 ATAGATCTCGACAACTCCAATCTTCATCAATCAGCTGTTTTACTCAAGCAGGCATGTCTC 120 Query 118 GATAGTGGATTTTTCTATGTCATAAATCATGGTATAAGTGAGGAACTCAAGGATGAGGCT 177 ||||||||||||||||||||||| |||||||||||||| |||||||| ||||| |||||| Sbjct 121 GATAGTGGATTTTTCTATGTCATTAATCATGGTATAAGCGAGGAACTGAAGGACGAGGCT 180 Query 178 TTCGAGCACAGCAAGAAGTTCTTCGCTCTTCCTTTGGAAGAGAAGATGAAAGTCTTGAGA 237 || || || ||||||||||| || |||||||||||||| ||||| ||||||||||||||| Sbjct 181 TTTGAACAGAGCAAGAAGTTTTTTGCTCTTCCTTTGGAGGAGAAAATGAAAGTCTTGAGA 240 Query 238 AACGAAAAGTATCGAGGCTATGCACCATTCCATGATTCTCTCTTAGACCCTGAAAACCAA 297 || |||||||||||||||||||||||||| || |||||||||||||||||| |||||||| Sbjct 241 AATGAAAAGTATCGAGGCTATGCACCATTTCACGATTCTCTCTTAGACCCTAAAAACCAA 300 Query 298 GTCCGAGGGGACTACAAAGAGGGTTTTACCATTGGGTTCGAAGGTAGCAAAGATGGTCCC 357 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 301 TTCCGAGGGGACTACAAAGAGGGTTTTACCATTGGGTTCGAAGGTGGCAAAGATGGTCCC 360 Query 358 CATTGGGATAAACCATTCCATAGCCCCAATATTTGGCCTAACCCTGACGTTTTGCCCGGA 417 ||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| Sbjct 361 CATGGGGATAAACCATTCCATAGCCCCAACATTTGGCCTAACTCTGACGTTTTGCCCGGA 420 Query 418 TGGCGGGAGACCATGGAGAAATATTATCAAGAAGCATTGAGGGTTTGTAAGTCTATTGCG 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 TGGCGGGAGACCATGGAGAAATATTATCAAGAAGCATTGAGGGTTTGTAAGTCTATTGCG 480 Query 478 AAAATAATGGCTTTGGCGCTCGACTTGGATGTGGATTACTTT-AATACACCAGAGATGCT 536 | |||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| Sbjct 481 AGAATAATGGCTTTGGCGCTCGACTTGGATGTGGATTA-TTTCAATACACCGGAGATGCT 539 Query 537 GGGAAATCCAATTGCAGATATGGTCTTGTTTCACTATGAAGGGAAGTCTGATCCCTCGAA 596 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 540 GGGAAATCCAATTGCAGATATGGTCTTGTTTCACTATGAAGGGAAGTCTGATCCCTCGAA 599 Query 597 AGGAATATATGCATGTGGAGCACATTCTGATTTCGGAATGATGTCTCTCTTAGCAACTGA 656 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 600 AGGAATATATGCATGTGGAGCACATTCTGATTTCGGAATGATGTCTCTCTTAGCAACTGA 659 Query 657 TGGTGTCATGGGACTTCAGATATGCAAGGATAAAGACGTGAAGCCTCAAAAGTGGGAATA 716 |||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct 660 TGGTGTAATGGGACTTCAGATTTGCAAGGATAAAGACGTGATGCCTCAAAAGTGGGAATA 719 Query 717 TACTCCATCGATTAAAGGAGCCTATATTGTGAATCTTGGTGATCTGCTTGAGCGTTGGAG 776 || |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 720 TATTCCATCAATTAAAGGAGCCTATATTGTGAATCTTGGTGATCTGCTGGAGCGTTGGAG 779 Query 777 TAATGGCTATTTCAAATCTACATTGCATCGGGTACTCGGGAATGGGCAGGACCGATATTC 836 ||||||||||||||| || ||||| ||||||||||| ||||||||||| ||||||||||| Sbjct 780 TAATGGCTATTTCAAGTCGACATTACATCGGGTACTTGGGAATGGGCAAGACCGATATTC 839 Query 837 TATTCCATTCTTCCTGAAACCGAGTCATGACTGTATAATAGAGTGTCTTCCTACCTGCCA 896 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 840 TATTCCATTCTTCCTGAAACCGAGTCATGACTGTATAATAGAGTGTCTTCCTACCTGCCA 899 Query 897 GTCTGAAAACAACCTTCCCAAATATCCAGCGATCAAATGTTCAACGTACATCTCCCAACG 956 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 900 GTCCGAAAACAACCTTCCCAAATATCCAGCGATCAAATGTTCAACGTACATCTCCCAACG 959 Query 957 TTACAAAGCAGTACATGCACACCTAAAACAGACCTAG 993 ||||||||||| ||||||||||||||||||||||||| Sbjct 960 TTACAAAGCAGCACATGCACACCTAAAACAGACCTAG 996 > Ahg359346 jgi|Araly1|359346|fgenesh1_pg.C_scaffold_132000003 Length=789 Score = 1153 bits (624), Expect = 0.0 Identities = 702/739 (95%), Gaps = 7/739 (1%) Strand=Plus/Plus Query 1 ATGGAGAATAAAACTGAGGAAG---AGGTATCAATCATCAAAGTTTCTTCCCTTACTTGC 57 |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct 1 ATGGAGAATAAAACTGAGGAAGATAAGGTATCAATCATCAAAGTTTCTGCCCTTACTTGC 60 Query 58 ATCGATCTCGACAACTCTGATCTTCATCAATCAGCTGTTTTACTCAAGCAGGCATGTCTC 117 || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 61 ATAGATCTCGACAACTCCAATCTTCATCAATCAGCTGTTTTACTCAAGCAGGCATGTCTC 120 Query 118 GATAGTGGATTTTTCTATGTCATAAATCATGGTATAAGTGAGGAACTCAAGGATGAGGCT 177 ||||||||||||||||||||||| |||||||||||||| |||||||| ||||| |||||| Sbjct 121 GATAGTGGATTTTTCTATGTCATTAATCATGGTATAAGCGAGGAACTGAAGGACGAGGCT 180 Query 178 TTCGAGCACAGCAAGAAGTTCTTCGCTCTTCCTTTGGAAGAGAAGATGAAAGTCTTGAGA 237 || || || ||||||||||| || |||||||||||||| ||||| ||||||||||||||| Sbjct 181 TTTGAACAGAGCAAGAAGTTTTTTGCTCTTCCTTTGGAGGAGAAAATGAAAGTCTTGAGA 240 Query 238 AACGAAAAGTATCGAGGCTATGCACCATTCCATGATTCTCTCTTAGACCCTGAAAACCAA 297 || |||||||||||||||||||||||||| || |||||||||||||||||| |||||||| Sbjct 241 AATGAAAAGTATCGAGGCTATGCACCATTTCACGATTCTCTCTTAGACCCTAAAAACCAA 300 Query 298 GTCCGAGGGGACTACAAAGAGGGTTTTACCATTGGGTTCGAAGGTAGCAAAGATGGTCCC 357 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 301 TTCCGAGGGGACTACAAAGAGGGTTTTACCATTGGGTTCGAAGGTGGCAAAGATGGTCCC 360 Query 358 CATTGGGATAAACCATTCCATAGCCCCAATATTTGGCCTAACCCTGACGTTTTGCCCGGA 417 ||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| Sbjct 361 CATGGGGATAAACCATTCCATAGCCCCAACATTTGGCCTAACTCTGACGTTTTGCCCGGA 420 Query 418 TGGCGGGAGACCATGGAGAAATATTATCAAGAAGCATTGAGGGTTTGTAAGTCTATTGCG 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 TGGCGGGAGACCATGGAGAAATATTATCAAGAAGCATTGAGGGTTTGTAAGTCTATTGCG 480 Query 478 AAAATAATGGCTTTGGCGCTCGACTTGGATGTGGATTACTTT-AATACACCAGAGATGCT 536 | |||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| Sbjct 481 AGAATAATGGCTTTGGCGCTCGACTTGGATGTGGATTA-TTTCAATACACCGGAGATGCT 539 Query 537 GGGAAATCCAATTGCAGATATGGTCTTGTTTCACTATGAAGGGAAGTCTGATCCCTCGAA 596 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 540 GGGAAATCCAATTGCAGATATGGTCTTGTTTCACTATGAAGGGAAGTCTGATCCCTCGAA 599 Query 597 AGGAATATATGCATGTGGAGCACATTCTGATTTCGGAATGATGTCTCTCTTAGCAACTGA 656 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 600 AGGAATATATGCATGTGGAGCACATTCTGATTTCGGAATGATGTCTCTCTTAGCAACTGA 659 Query 657 TGGTGTCATGGGACTTCAGATATGCAAGGATAAAGACGTGAAGCCTCAAAAGTGGGAATA 716 |||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct 660 TGGTGTAATGGGACTTCAGATTTGCAAGGATAAAGACGTGATGCCTCAAAAGTGGGAATA 719 Query 717 TACTCCATCGA-TTAAAGG 734 || |||||| | ||||||| Sbjct 720 TATTCCATC-ACTTAAAGG 737 > Ahg485021 jgi|Araly1|485021|fgenesh2_kg.5__1013__AT3G46500.1 Length=1199 Score = 798 bits (432), Expect = 0.0 Identities = 726/863 (84%), Gaps = 39/863 (5%) Strand=Plus/Plus Query 107 AGGCATGTCTCGATAGTGGATTTTTCTATGTCATAAATCATGGTATAAGTGAGGAACTCA 166 |||||||||| ||| |||||||||||||||||| |||||||||||| |||||||| | | Sbjct 198 AGGCATGTCTAGATTGTGGATTTTTCTATGTCACAAATCATGGTATTAGTGAGGAGTTAA 257 Query 167 AGGATGAGGCTTTCGAGCACAGCAAGAAGTTCTTCGCTCTTCCTTTGGAAGAGAAGATGA 226 |||| |||||||||||||| |||||||||||||| |||||||||||||| ||||| |||| Sbjct 258 AGGACGAGGCTTTCGAGCAAAGCAAGAAGTTCTTTGCTCTTCCTTTGGACGAGAAAATGA 317 Query 227 AAGTCTTGAGAAACGAAAAGTATCGAGGCTATGCACCATTCCATGATTCTCTCTTAGA-C 285 ||||||||| ||| |||||| ||| ||||||| |||| ||| || || | | | Sbjct 318 AAGTCTTGAAAAATGAAAAGCATCAAGGCTATTCACCCGTCC----TT-AGTC--AAATC 370 Query 286 CCTGAAAACCAAGTCCGA-GGGGACTACAAAGAGGGTTTTACCATTGGGTTCGAAGGTAG 344 |||| |||||| ||| | ||||| |||||||| ||||| |||| | ||| | Sbjct 371 TCTGATAACCAAATCC-ATGGGGATTACAAAGAAAGTTTTTTCATT--G---GAA--T-- 420 Query 345 CAAAGATGGTCCCCATTGGGATAAACCATTCCATAGCCCCAATATTTGGCCTAACCCTGA 404 | || | | | ||| |||| ||||||| | || | || ||||||||||||||||| Sbjct 421 CGAA-A--G-CTCCA--ACGATACACCATTCTGTCGCGCTAACATTTGGCCTAACCCTGA 474 Query 405 CGTTTTGCCCGGATGGCGGGAGACCATGGAGAAATATTATCAAGAAGCATTGAGGGTTTG 464 |||||||| ||||||| || ||||||||||||||| |||||||||||||||||||||| Sbjct 475 TGTTTTGCCGGGATGGCAGGCGACCATGGAGAAATACCATCAAGAAGCATTGAGGGTTTG 534 Query 465 TAAGTCTATTGCGAAAATAATGGCTTTGGCGCTCGACT-TGGATGTG-GATTACTTTAAT 522 |||| ||||||| | | || |||| ||||||||||| | |||||| | ||||||||| || Sbjct 535 TAAGGCTATTGCTAGAGTACTGGCATTGGCGCTCGA-TGTGGATG-GAGATTACTTTGAT 592 Query 523 ACACCAGAGATGCTGGGAAATCCAATTGCAGATATG-GTCTTGTTTCACTATGAAGGGAA 581 | |||||| |||||||||||||| | ||| |||| | |||| ||||||||||||||| Sbjct 593 AAACCAGAAATGCTGGGAAATCCCCTCGCATTTATGCG-CTTGCTTCACTATGAAGGGAT 651 Query 582 GTCTGATCCCTCGAAAGGAATATATGCATGTGGAGCACATTCTGATTTCGGAATGATGTC 641 |||||||||||| ||||||||||||| ||| || ||||||||||||||||||||||| | Sbjct 652 GTCTGATCCCTCAAAAGGAATATATGGATGCGGCCCACATTCTGATTTCGGAATGATGAC 711 Query 642 TCTCTTAGCAACTGATGGTGTCATGGGACTTCAGATATGCAAGGATAAAGACGTGAAGCC 701 |||||||||||| ||| |||| ||||| || |||||||||||||||| |||||||||||| Sbjct 712 TCTCTTAGCAACCGATAGTGTAATGGGGCTCCAGATATGCAAGGATAGAGACGTGAAGCC 771 Query 702 TCA-AAAGTGGGAATATACT-CCATCGATTAAAGGAGCCTATATTGTGAATCTTGGTGAT 759 | | ||||||||||||| | |||||||||||||| || |||||||||||| ||||||| Sbjct 772 T-AGGAAGTGGGAATATA-TACCATCGATTAAAGGCGCATATATTGTGAATATTGGTGA- 828 Query 760 C-TGCTTGAGCGTTGGAGTAATGGCTA-TTTCAAATCTACATTGCATCGGGTACTCGGGA 817 | |||| ||||||||||| |||||| | ||| ||||| |||||||||||||||| |||| Sbjct 829 CTTGCTGGAGCGTTGGAGCAATGGC-ATTTTTAAATCCGCATTGCATCGGGTACTTGGGA 887 Query 818 ATGGGCAGGACCGATATTCTATTCCATTCTTCCTGAAACCGAGTCATGACTGTATAATAG 877 |||| || ||||||||||| ||| ||||||| ||| |||||||||| ||||||||| ||| Sbjct 888 ATGGTCAAGACCGATATTCCATTGCATTCTTTCTGCAACCGAGTCACGACTGTATAGTAG 947 Query 878 AGTGTCTTCCTACCTGCCAGTCTGAAAACAACCTTCCCAAATATCCAGCGATCAAATGTT 937 | ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct 948 AATGTCTTCCTACCTGCCAGTCTGAAAACAACCCTCCCAAATATCCAGCTATCAAATGTT 1007 Query 938 CAACGTACATCTCCCAACGTTAC 960 |||||||| || ||||||||||| Sbjct 1008 CAACGTACCTCACCCAACGTTAC 1030 > Ahg473661 jgi|Araly1|473661|fgenesh2_kg.1__3615__AT1G35190.1 Length=1210 Score = 728 bits (394), Expect = 0.0 Identities = 765/943 (81%), Gaps = 30/943 (3%) Strand=Plus/Plus Query 33 CATCAAAGTTTCTTCCCTTACTTGCATCGATCTCGAC-AACTCTGATCTTCATCAATCAG 91 ||| |||||||| || |||| ||| |||||||| | | ||| ||||||||||| |||| Sbjct 27 CATGAAAGTTTCATCTCTTAATTGTATCGATCTAG-CTAACGATGATCTTCATCTTTCAG 85 Query 92 CTGTTTTACTCAAGCAGGCATGTCTCGATAGTGGATTTTTCTATGTCATAAATCATGGTA 151 || || || || ||||||| | | ||| |||||||||||||||| || |||||||| | Sbjct 86 TTGCTTCCCTTAAACAGGCATCTTTGGATTGTGGATTTTTCTATGTGATCAATCATGGGA 145 Query 152 TAAGTGAGGAACTCAAGGATGAGGCTTTCGAGCACAGCAAGAAGTTCTTCGCTCTTCCTT 211 ||| || || ||| ||| || | ||||||||| ||||||||||| || || ||||||| Sbjct 146 TAAACGAAGAGTTCATGGAAGATGTTTTCGAGCAGAGCAAGAAGTTTTTTGCCCTTCCTT 205 Query 212 TGGAAGAGAAGATGAAAGTCTTGAGAAACGAAAAGTATCGAGGCTATGCACCAT-TCCAT 270 | || |||||||||||||| ||||||||||||||| || |||||||| |||| | | | | Sbjct 206 TAGAGGAGAAGATGAAAGTGTTGAGAAACGAAAAGCATAGAGGCTATACACC-TGTTCTT 264 Query 271 GATTCTCTCTTAGA-CCCTGAA-AACCAAGTCCGA-GGGGACT-ACAAAGAGGGTT-TTA 325 ||| ||||| ||| || || ||||| | | ||||| | ||||||| |||| ||| Sbjct 265 GATGAAAAATTAGATCCC--AAGAATCAAGT-CAATGGGGA-TCACAAAGAAGGTTATTA 320 Query 326 CCATTGG-GTTCGAAGGTAGC-AAAGATGGTCCCCATTGGGATAAACCATTCCATAGCCC 383 |||||| || ||| || | ||||||| ||| ||||||||||||||||| || |||| Sbjct 321 -CATTGGAATT-GAA-GTTCCTAAAGATGATCCTCATTGGGATAAACCATTTTATGGCCC 377 Query 384 CAATATTTGGCCTAACCCTGACGTTTTGCCCGGATGGCGGGAGACCATGGAGAAATATTA 443 || ||||||| | |||| ||||| || || ||||| || || |||||||||||| | Sbjct 378 TAACCCTTGGCCTGATACTGATGTTTTACCTGGTTGGCGAGAAACAATGGAGAAATATCA 437 Query 444 TCAAGAAGCATTGAGGGTTTGTAAGTCTATTGCGAAAA-TAATGGCTTTGGCGCTCGACT 502 |||||||||||||||||||| |||| |||||| ||||| || |||| || || ||||||| Sbjct 438 TCAAGAAGCATTGAGGGTTTCTAAGGCTATTG-GAAAACTATTGGCGTTAGCACTCGACT 496 Query 503 TGGATGTGGATTACTTTAATA-CACCAGAGATGCTGGGAAATCCAATTGCAGA-TATG-G 559 |||||||||| |||||| ||| | |||||||||| ||||| || |||||| | |||| | Sbjct 497 TGGATGTGGAATACTTTGATAGGA-CAGAGATGCTTGGAAAGCCTATTGCA-ACTATGCG 554 Query 560 TCTTGTTTCACTATGAAGGGAAGTCTGATCCCTCGAAAGGAATATATGCATGTGGAGCAC 619 ||||| | |||| |||||| ||||||||||| ||||||||||||||||||||||||| Sbjct 555 -ATTGTTGCGCTATCAAGGGATTTCTGATCCCTCAAAAGGAATATATGCATGTGGAGCAC 613 Query 620 ATTCTGATTTCGGAATGATGTCTCTCTTAGCAACTGATGGTGTCATGGGACTTCAGATAT 679 |||| ||||||||||||||| |||| ||||| || |||||||| |||||||| ||||||| Sbjct 614 ATTCAGATTTCGGAATGATGACTCTGTTAGCCACCGATGGTGTAATGGGACTCCAGATAT 673 Query 680 GCAAGGATAAAGA-CGTGAAGCCTCAAAAGTGGGAATATACT-CCATCGATTAAAGGAGC 737 |||| ||||| || || || |||||| |||||||||||| | || ||||||||||||| Sbjct 674 GCAAAGATAA-GAACGCGACGCCTCAGAAGTGGGAATATG-TACCGCCGATTAAAGGAGC 731 Query 738 CTATATTGTGAATCTTGGTGATCTGCTTGAGCGTTGGAGTAATGGCTATTTCAAATCTAC 797 | ||| ||||||||||| ||| |||| || |||||||||||||||| ||||||||| || Sbjct 732 ATTTATCGTGAATCTTGGCGATATGCTGGAACGTTGGAGTAATGGCTTTTTCAAATCCAC 791 Query 798 ATTGCATCGGGTACTCGGGAATGGGCAGGACCGATATTCTATTCCATTCTTCCTGAAACC 857 ||||||||||| || ||||| || ||||| |||||||| ||||||||||| || |||| Sbjct 792 GTTGCATCGGGTTCTTGGGAACGGTCAGGAACGATATTCCATTCCATTCTTTGTGGAACC 851 Query 858 GAGTCATGACTGTATAATAGAGTGTCTTCCTACCTGCCAGTCTGAAAACAACCTTCCCAA 917 | |||||||||| | | |||||||| || |||||| |||| |||| | ||||||| || Sbjct 852 AAATCATGACTGTCTCGTGGAGTGTCTCCCAACCTGCAAGTCGGAAAGCGACCTTCCTAA 911 Query 918 ATATCCAGCGATCAAATGTTCAACGTACATCTCCCAACGTTAC 960 ||||||| |||||||||| || || ||| || |||| |||||| Sbjct 912 ATATCCACCGATCAAATGCTCGACATACCTCACCCAGCGTTAC 954 > Ahg937350 jgi|Araly1|937350|scaffold_501541.1 Length=533 Score = 451 bits (244), Expect = 4e-126 Identities = 270/282 (96%), Gaps = 3/282 (1%) Strand=Plus/Plus Query 464 GTAAGTCTATTGCGAAAATAATGGCTTTGGCGCTCGACTTGGATGTGGATTACTTT-AAT 522 ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||| Sbjct 1 GTAAGTCTATTGCGAGAATAATGGCTTTGGCGCTCGACTTGGATGTGGATTA-TTTCAAT 59 Query 523 ACACCAGAGATGCTGGGAAATCCAATTGCAGATATGGTCTTGTTTCACTATGAAGGGAAG 582 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 60 ACACCGGAGATGCTGGGAAATCCAATTGCAGATATGGTCTTGTTTCACTATGAAGGGAAG 119 Query 583 TCTGATCCCTCGAAAGGAATATATGCATGTGGAGCACATTCTGATTTCGGAATGATGTCT 642 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 120 TCTGATCCCTCGATAGGAATATATGCATGTGGAGCACATTCTGATTTCGGAATGATGTCT 179 Query 643 CTCTTAGCAACTGATGGTGTCATGGGACTTCAGATATGCAAGGATAAAGACGTGAAGCCT 702 |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| Sbjct 180 CTCTTAGCAACTGATGGTGTAATGGGACTTCAGATTTGCAAGGATAAAGACGTGAAGCCT 239 Query 703 CAAAAGTGGGAATATACTCCATCGATTAAAGGAGCCTATATT 744 |||||||||||||||| |||||| |||||||| | ||| ||| Sbjct 240 CAAAAGTGGGAATATATTCCATCAATTAAAGG-GTCTACATT 280 Score = 320 bits (173), Expect = 1e-86 Identities = 195/205 (95%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 793 TCTACATTGCATCGGGTACTCGGGAATGGGCAGGACCGATATTCTATTCCATTCTTCCTG 852 |||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct 273 TCTACATTACATCGGGTACTTGGGAATGGGCAAGACCGATATTCTATTCCATTCTTCCTG 332 Query 853 AAACCGAGTCATGACTGTATAATAGAGTGTCTTCCTACCTGCCAGTCTGAAAACAACCTT 912 ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| Sbjct 333 AAACCGAGTCATGACTGTATAATAGAGTGTCTTCCTAACTGCCAGTCCGAAAACAACCTT 392 Query 913 CCC--A-A-ATATCCAGCGATCAAATGTTCAACGTACATCTCCCAACGTTACAAAGCAGT 968 ||| | | ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 393 CCCAAATATATATCCAGCGATCAAATGTTCAACGTACATCTCCCCACGTTACAAAGCAGT 452 Query 969 ACATGCACACCTAAAACAGACCTAG 993 ||||||||||||||||||||||||| Sbjct 453 ACATGCACACCTAAAACAGACCTAG 477 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 36902983656 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5