BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G52840.1 Length=2517 Score E Sequences producing significant alignments: (Bits) Value Ahg485655 jgi|Araly1|485655|fgenesh2_kg.5__1647__AT3G52840.1 3888 0.0 Ahg492198 jgi|Araly1|492198|fgenesh2_kg.7__1631__AT4G26140.1 2063 0.0 Ahg917381 jgi|Araly1|917381|Al_scaffold_0008_2132 1613 0.0 > Ahg485655 jgi|Araly1|485655|fgenesh2_kg.5__1647__AT3G52840.1 Length=2417 Score = 3888 bits (2105), Expect = 0.0 Identities = 2318/2421 (96%), Gaps = 14/2421 (1%) Strand=Plus/Plus Query 3 TATGTACATATAGCTTCTAGATTCTCATTCATTCCAATCACAGAGCTGATAATTTCAGCA 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 TATGTACATATAGCTTCTAGATTCTCATTCATTCCAATCACAGAGCTGATAATTTCAGCA 60 Query 63 GAA---TATTTACTATTTTTTATAAAGAAACaaaaaaaCATAGAAAGGTTTG-GTT-TTT 117 ||| | ||||| | |||| | ||||||||||||| ||| ||||| | ||| ||| ||| Sbjct 61 GAATCTTTTTTACCAGTTTTAAAAAAGAAACAAAAAGACAGAGAAAAG-TTGAGTTATTT 119 Query 118 CAAAGAACGTGAAAATGAGTATGCATTTTAGGA-ATAAAGCATGGATTATTCTGGCAATT 176 |||||| | ||||||| || ||||||||| || |||||||||||||| |||| |||||| Sbjct 120 -AAAGAAGGGGAAAATGGGTGTGCATTTTA-GAGATAAAGCATGGATTTTTCTAGCAATT 177 Query 177 CTGTGTTTTTCATCTTTGATTCACTCAACAGAAGCAGTGGTCACTTATGATCACAAAGCT 236 ||||||||||||| |||||| || || ||||||||||||||||||||||| |||||| Sbjct 178 TTGTGTTTTTCATCGTTGATTTGGTCGACTGAAGCAGTGGTCACTTATGATCATAAAGCT 237 Query 237 TTAATCATCAATGGACAGAGAAGGATCCTTATCTCCGGTTCTATACACTATCCAAGAAGC 296 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 238 TTAATCATCAATGGACAGAGAAGGATCCTTATCTCCGGTTCTATTCACTATCCAAGAAGC 297 Query 297 ACTCCTGAGATGTGGCCTGATCTTATAAAGAAGGCCAAAGAAGGAGGTTTGGATGTTATA 356 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 298 ACTCCTGAGATGTGGCCTGATCTTATAAAGAAGGCCAAAGAAGGAGGTTTGGATGTTATA 357 Query 357 CAAACATATGTTTTCTGGAATGGACATGAACCTTCTCCTGGAAATTACTATTTTCAGGAT 416 ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 358 CAAACTTATGTTTTCTGGAATGGACATGAACCTTCTCCTGGAAATTATTATTTTCAGGAT 417 Query 417 AGATATGATCTGGTTAAATTCACCAAACTGGTGCACCAAGCTGGACTATATCTTGATCTA 476 |||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||| Sbjct 418 AGATATGATCTGGTTAAATTCACCAAGCTGGTGCATCAAGCTGGTCTATATCTTGATCTA 477 Query 477 AGAATTGGTCCATATGTTTGTGCCGAGTGGAATTTTGGGGGATTTCCGGTTTGGCTCAAA 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 478 AGAATTGGTCCATATGTTTGTGCCGAGTGGAATTTTGGGGGATTTCCGGTTTGGCTCAAA 537 Query 537 TATGTTCCTGGTATGGTTTTCAGAACAGATAACGAACCTTTCAAGATTGCAATGCAAAAA 596 |||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||| | Sbjct 538 TATGTTCCTGGTATTGTTTTCAGAACAAATAATGAACCTTTCAAGATTGCAATGCAAAGA 597 Query 597 TTCACAAAGAAGATTGTGGATATGATGAAAGAAGAAAAGCTGTTTGAGACTCAAGGAGGA 656 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 598 TTCACAAAGAAGATTGTGGATATGATGAAAGAAGAAAAGCTGTTTGAGACTCAAGGAGGA 657 Query 657 CCCATCATTCTCTCACAGATAGAGAATGAGTATGGACCAATGCAATGGGAGATGGGAGCA 716 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 658 CCCATCATTCTCTCACAGATAGAGAATGAGTATGGACCAATGGAATGGGAGATGGGAGCA 717 Query 717 GCAGGAAAGGCTTACTCAAAATGGACAGCTGAAATGGCATTGGGACTGTCCACAGGTGTC 776 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 718 GCAGGAAAGGCTTACTCAAAATGGACAGCTGAAATGGCATTGGGACTGTCCACAGGTGTC 777 Query 777 CCATGGATTATGTGCAAGCAAGAGGATGCTCCTTACCCTATTATAGACACATGCAATGGA 836 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 778 CCATGGATTATGTGCAAGCAAGAGGATGCTCCTTACCCCATTATAGACACATGCAATGGC 837 Query 837 TTTTATTGTGAGGGTTTCAAACCAAACTCAGACAATAAGCCGAAGTTGTGGACAGAGAAC 896 ||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct 838 TTTTACTGTGAGGGTTTCAAACCAAACTCAGTCAACAAGCCGAAGTTGTGGACAGAGAAC 897 Query 897 TGGACTGGTTGGTTCACGGAATTTGGAGGTGCGATACCAAATAGACCAGTCGAAGACATT 956 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 898 TGGACTGGTTGGTTCACGGAATTTGGAGGTCCGATACCAAATAGACCAGTCGAAGACATT 957 Query 957 GCGTTCTCCGTGGCTCGTTTCATACAGAACGGTGGTTCTTTTATGAATTATTATATGTAT 1016 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 958 GCGTTCTCCGTGGCTCGTTTCATACAGAACGGTGGTTCTTTTATGAATTATTATATGTAT 1017 Query 1017 TATGGAGGGACCAACTTTGATAGAACAGCCGGTGTTTTCATCGCCACTAGCTATGACTAC 1076 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1018 TATGGAGGGACCAACTTTGATAGAACAGCCGGTGTTTTCATCGCCACAAGCTATGACTAC 1077 Query 1077 GATGCTCCTATTGACGAATATGGATTACTAAGAGAACCCAAGTATAGTCACTTGAAAGAG 1136 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1078 GATGCTCCTCTTGACGAATATGGATTACTGAGAGAACCCAAGTATAGTCACTTGAAAGAG 1137 Query 1137 TTACATAAAGTCATCAAGCTATGTGAACCTGCATTGGTCTCTGTTGATCCCACCATCACA 1196 |||||||| ||||| ||||| |||||||||||||||||||| |||||||||||||||||| Sbjct 1138 TTACATAAGGTCATTAAGCTGTGTGAACCTGCATTGGTCTCCGTTGATCCCACCATCACA 1197 Query 1197 TCGCTCGGCGATAAACAAGAAATTCATGTGTTCAAGTCCAAGACTTCTTGCGCTGCATTT 1256 ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1198 TCGATCGGCGATAAACAAGAAGTTCATGTGTTCAAGTCCAAGACTTCTTGCGCTGCATTT 1257 Query 1257 CTCTCGAACTACGACACGAGTTCTGCAGCAAGAGTTATGTTTAGGGGATTTCCGTATGAT 1316 |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1258 CTCTCGAACTACGATACGAGTTCTGCAGCAAGAATTATGTTTAGGGGATTTCCGTATGAT 1317 Query 1317 TTGCCTCCTTGGTCTGTTAGTATTTTACCAGACTGCAAAACCGAATATTACAACACTGCA 1376 ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| Sbjct 1318 TTGCCTCCTTGGTCTGTCAGTATTTTACCAGACTGCAAAACCGAGTATTACAACACTGCA 1377 Query 1377 AAGATCCGTGCACCAACCATACTTATGAAGATGATTCCTACAAGCAC-AAAGTTTTCCTG 1435 ||||||||||||||||||||||||||||||||| |||||| ||||| ||| |||||||| Sbjct 1378 AAGATCCGTGCACCAACCATACTTATGAAGATGGCTCCTACTAGCACGAAA-TTTTCCTG 1436 Query 1436 GGAATCGTACAACGAAGGAAGCCCTTCTTCAAATGAAGCTGGTACATTTGTTAAAGATGG 1495 |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct 1437 GGAATCGTACAACGAAGGAAGCCCTTCTTCAAATGATGATGGTACATTTGTTAAAGATGG 1496 Query 1496 TCTAGTGGAACAAATAAGCATGACCAGAGATAAAACAGATTATTTCTGGTATTTTACGGA 1555 ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1497 TCTTGTGGAACAAATAAGCATGACCAGAGATAAAACAGATTATTTCTGGTATTTAACGGA 1556 Query 1556 CATTACAATTGGTTCTGATGAGAGCTTCTTGAAGACTGGTGATAATCCTCTTCTTACCAT 1615 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1557 CATTACAATTGGTTCTGATGAGAGCTTTTTGAAGACTGGTGATAATCCTCTTCTTACCAT 1616 Query 1616 TTTTTCGGCTGGGCATGCTCTTCATGTATTCGTTAATGGCCTGCTTGCAGGAACTTCCTA 1675 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1617 TTTTTCGGCTGGGCATGCTCTTCATGTATTCGTTAATGGCCTGCTTGCAGGAACTTCCTA 1676 Query 1676 TGGAGCACTGAGCAACTCAAAGCTCACATTTAGTCAAAATATCAAATTGAGTGTAGGCAT 1735 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1677 TGGAGCACTGAGCAACTCAAAGCTCACATTTAGTCAAAAGATCAAATTGAGTGTAGGCAT 1736 Query 1736 CAACAAACTTGCTCTGCTTAGTACTGCAGTGGGTCTTCCGAACGCTGGTGTGCATTATGA 1795 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct 1737 CAACAAACTTGCTCTGCTAAGTACTGCAGTGGGTCTTCCGAACGCTGGTGTGCATTACGA 1796 Query 1796 GACTTGGAATACTGGTATTCTAGGGCCAGTCACATTGAAGGGAGTAAACTCTGGAACATG 1855 |||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||| Sbjct 1797 GACTTGGAATACTGGTGTTCTAGGACCAGTCACATTGAAGGGAGTTAACTCTGGAACATG 1856 Query 1856 GGACATGTCTAAATGGAAGTGGTCTTACAAGATTGGTCTTAGAGGTGAAGCTATGAGCCT 1915 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1857 GGACATGTCTAAATGGAAGTGGTCTTACAAGATTGGTATTAGAGGTGAAGCTATGAGCCT 1916 Query 1916 TCACACCTTAGCTGGAAGTTCAGCTGTGAAATGGTGGATCAAAGGAT--T-CGTGGTCAA 1972 ||| ||||||||||||||||||||||||||||||||||| ||||||| | ||||||||| Sbjct 1917 TCATACCTTAGCTGGAAGTTCAGCTGTGAAATGGTGGATAAAAGGATCATTCGTGGTCAA 1976 Query 1973 GAAGCAACCCTTGACCTGGTACAAGTCTTCTTTTGATACACCGAGAGGCAACGAACCACT 2032 |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1977 GAAGGAACCCTTGACCTGGTACAAGTCTTCTTTTGATACACCGAAAGGCAACGAACCACT 2036 Query 2033 GGCTTTGGACATGAACACAATGGGGAAAGGTCAAGTTTGGGTAAATGGACATAACATTGG 2092 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2037 GGCTTTGGACATGAACACAATGGGGAAAGGTCAAGTTTGGGTAAATGGACATAACATTGG 2096 Query 2093 ACGCCACTGGCCTGCCTACACGGCTCGTGGGAACTGTGGACGTTGCAACTATGCTGGAAT 2152 |||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||| Sbjct 2097 ACGCCACTGGCCTGCCTACACGGCTCGTGGGAACTGCGGACGCTGCAATTATGCTGGAAT 2156 Query 2153 TTACAACGAGAAGAAATGTCTCAGTCACTGTGGTGAACCTTCTCAAAGATGGTACCATGT 2212 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 2157 TTACAACGAGAAGAAATGTCTCAGTCACTGTGGTGAACCTTCACAAAGATGGTACCATGT 2216 Query 2213 ACCTCGTTCATGGCTAAAACCGTTTGGGAACCTTCTAGTTATATTTGAGGAATGGGGTGG 2272 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 2217 GCCTCGTTCATGGCTAAAACCATTTGGGAACCTTCTAGTTATATTTGAGGAATGGGGTGG 2276 Query 2273 TGATCCAAGTGGAATCTCTCTTGTTAAAAGGACAGCCAAATGAAGCTTCTTACTTCAAAT 2332 ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| | Sbjct 2277 TGATCCAAGTGGAATCTCTCTTGTTGAAAGAACAGCCAAATGAAGCTTCTTACTTCGTTT 2336 Query 2333 TTTTTCCGGAAGCATGCAGAGATTGTCATGTACAGATATAGTTGCATTCATTGGCTCATT 2392 |||||| |||||||||| ||||||||||||||||||||||||||||| |||||||| || Sbjct 2337 TTTTTCTGGAAGCATGCCTAGATTGTCATGTACAGATATAGTTGCATTTATTGGCTCTTT 2396 Query 2393 GTGGAAGaatattatatatat 2413 |||||||||| |||||| ||| Sbjct 2397 GTGGAAGAATGTTATATGTAT 2417 > Ahg492198 jgi|Araly1|492198|fgenesh2_kg.7__1631__AT4G26140.1 Length=2383 Score = 2063 bits (1117), Expect = 0.0 Identities = 1877/2239 (84%), Gaps = 72/2239 (3%) Strand=Plus/Plus Query 142 ATTTTAGGAATAAAGCATGGATTA-TTCTGGCAATTCTGTGTTTTTCATCTTTGATTCAC 200 |||| ||| ||||||| |||| || |||||| ||||| || | ||||||||||||| | Sbjct 85 ATTTCAGGGATAAAGCCTGGA-TACTTCTGGGGATTCTTTGGTGTTCATCTTTGATTTAT 143 Query 201 TCA-ACAGAAGCAGTGGTCACTTATGATCACAAAGCTTTAATCATCAATGGACAGAGAAG 259 ||| | ||||| |||||||||| |||| |||||| | ||||||||||| |||||||| Sbjct 144 TCAGTTA-AAGCAATGGTCACTTACGATCGTAAAGCTGTGATCATCAATGGTCAGAGAAG 202 Query 260 GATCCTTATCTCCGGTTCTATACACTATCCAAGAAGCACTCCTGAGATGTGGCCTGATCT 319 ||||||| |||| || || || ||||| ||||||||||| ||||||||||||||||| || Sbjct 203 GATCCTTCTCTCTGGCTCCATTCACTACCCAAGAAGCACACCTGAGATGTGGCCTGACCT 262 Query 320 TATA-AAGAAGGCCAAAGAAGGAGGTTTGGATGTTATACAAACATATGTTTTCTGGAATG 378 |||| || ||||||||||| |||||||||||||||||||| || |||||||||||||||| Sbjct 263 TATACAA-AAGGCCAAAGATGGAGGTTTGGATGTTATACAGACTTATGTTTTCTGGAATG 321 Query 379 GACATGAACCTTCTCCTGGA-AATTACTATTTTCAGGATAGATATGATCTGGTTAAATTC 437 | |||||||||||||||||| || || |||||| |||| ||||||||| ||||||| ||| Sbjct 322 GGCATGAACCTTCTCCTGGACAA-TATTATTTTGAGGACAGATATGATTTGGTTAAGTTC 380 Query 438 ACCAAACTGGTGCACCAAGCTGGACTATATC-TTGATCTAAGAATTGGTCCATATGTTTG 496 | ||||||||| || |||||||| || || | || |||| ||||||||||| |||||||| Sbjct 381 ATCAAACTGGTACAACAAGCTGGTCTTTA-CGTTCATCTCAGAATTGGTCCTTATGTTTG 439 Query 497 TGCCGAGTGGAATTTTGG-GGGATTTCCGGTTTGGCTCAAATATGTTCCTGGTATGGT-T 554 || || ||||| || || ||| ||||| |||||||||||||||||||| | |||||| | Sbjct 440 CGCTGAATGGAACTTCGGAGGG-TTTCCTGTTTGGCTCAAATATGTTCCCGATATGGTGT 498 Query 555 TTCAGAACAGATAACGAACCTTTCAAGATTGCAATGCAAAAATTCACAAAGAAGATTGTG 614 || || || || || |||||||||||| |||||||||||||||||| ||||||||||| Sbjct 499 TT-AGGACCGACAATGAACCTTTCAAGGCTGCAATGCAAAAATTCACTGAGAAGATTGTG 557 Query 615 GATATGATGAAAGAAGAAAAGCTGTTTGAGACTCAAGGAGGACCCATCATTCTCTCACAG 674 | ||||||||||||||||| | ||||||||||||||||||||||||||||| |||||| Sbjct 558 GGGATGATGAAAGAAGAAAAATTATTTGAGACTCAAGGAGGACCCATCATTCTGTCACAG 617 Query 675 ATAGAGAATGAGTATGGACCAAT-GCAATGGGAGATGGGAGCAGCAGGAAAGGCTTACTC 733 ||||||||||||||||||||||| | | |||||||| |||||| |||| ||||| ||| | Sbjct 618 ATAGAGAATGAGTATGGACCAATAG-AGTGGGAGATAGGAGCACCAGGGAAGGCATACAC 676 Query 734 AAAATGGACAGCTGAAATGGCATTGGGACTGTCCACAGGTGTCCCATGGATTATGTGCAA 793 ||||||| ||||||||||||| ||||| ||||| ||||||||||||||||||||||| Sbjct 677 AAAATGGGTAGCTGAAATGGCACAAGGACTCTCCACCGGTGTCCCATGGATTATGTGCAA 736 Query 794 GCAAGAGGATGCTCCTTACCCTATTA-TAGACACATGCAATGGATTTTATTGTGAGGGTT 852 |||||| ||||||||| || |||||| || ||||||||||||| |||||||||||| || Sbjct 737 GCAAGATGATGCTCCTAACTCTATTATTA-ACACATGCAATGGGTTTTATTGTGAGAATT 795 Query 853 TCAAACCAAACTCAGACAATAAGCCGAAGTTGTGGACAGAGAACTGGACTGGTTGGTTCA 912 ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct 796 TCAAACCAAACTCGGACAATAAGCCGAAAATGTGGACAGAGAACTGGACTGGTTGGTTCA 855 Query 913 CGGAATTTGGAGGTGCGATACCAAATAGACCAGTCGAAGACATTGCGTTCTCCGTGGCTC 972 | || |||||||||||| ||||| | ||||||| |||||||||||| || |||||||||| Sbjct 856 CAGAGTTTGGAGGTGCGGTACCATACAGACCAGCCGAAGACATTGCCTTATCCGTGGCTC 915 Query 973 GTTTCATACAGAACGGTGGTTCTTTTATGAATTATTATATGTATTATGGAGGGACCAACT 1032 | ||||||||||||||||| || || || || || |||||||| ||||||| ||||||| Sbjct 916 GCTTCATACAGAACGGTGGCTCCTTCATCAACTACTATATGTACCATGGAGGAACCAACT 975 Query 1033 TTGATAGAACAGCCGGTGTTTTCATCGCCACTAGCTATGACTACGATGCTCCTATTGACG 1092 | || |||||||| || | ||||||||||| ||||||||||| ||||||||| |||| | Sbjct 976 TCGACAGAACAGCTGGCGAATTCATCGCCACCAGCTATGACTATGATGCTCCTCTTGATG 1035 Query 1093 AATATGGATTACTAAGAGAACCCAAGTATAGTCACTTG-AAAGAGTTACATAAAGTCATC 1151 ||||||| || | |||||||| ||||||||||||||| |||| | | ||||| |||||| Sbjct 1036 AATATGGGTTGCCGAGAGAACCTAAGTATAGTCACTTGAAAAG-GCTGCATAAGGTCATC 1094 Query 1152 AAGCTATGTGAACCTGCATTGGTCTCTGTTGATCCCACCATCACATCGCTCGGCGATAAA 1211 ||||| |||||||| ||||||||||||| |||||| || |||||||||||||||||||| Sbjct 1095 AAGCTCTGTGAACCGGCATTGGTCTCTGCTGATCCTACGGTCACATCGCTCGGCGATAAA 1154 Query 1212 CAAGAAATTCATGTGTTCAAGTC-CAAGACTTCTTGCGCTGCATTTCTCTCGAACTACGA 1270 |||||| ||||||||||||||| | || | ||||||||||| |||||||| || ||| | Sbjct 1155 CAAGAAGCTCATGTGTTCAAGTCTC-AGTCATCTTGCGCTGCTTTTCTCTCAAATTACAA 1213 Query 1271 CACGAGTTCTGCAGCAAGAGTTAT-GTTTAGG-GGATTTCCGTATGATTTGCCTCCTTGG 1328 ||| |||||||| ||||||| | | |||| || |||| | | |||||| ||||||||||| Sbjct 1214 CACTAGTTCTGCTGCAAGAG-TCTCGTTT-GGCGGATCTACATATGATCTGCCTCCTTGG 1271 Query 1329 TCTGTTAGTATTTTACCAGACTGCAAAACCGAATATTACAACACTGCAAA-G---A--TC 1382 ||||| |||||| |||| ||||||||||| || ||||||||||||||||| | | || Sbjct 1272 TCTGTCAGTATTCTACCCGACTGCAAAACTGAGTATTACAACACTGCAAAGGTACAGGTC 1331 Query 1383 CGTGCACCAACCATACTTATGAAGATGATTCCTACAAGCACA-AAGTTTTCCTGGGAATC 1441 ||| || ||| ||||| ||||||||| ||||||||| |||| | || || |||| ||| Sbjct 1332 CGTACATCAAGCATACACATGAAGATGGTTCCTACAAACACACCA-TTCTCTTGGGGATC 1390 Query 1442 GTACAACGAAGGA-AGCCCTTCTTCAAATGA-AGCTGGTACATTTGTTA-AAGATGGTCT 1498 ||||||||| || | |||||| |||| || | |||||| ||| | | ||||||| || Sbjct 1391 ATACAACGAA-GAGATTCCTTCTGCAAACGACA-ATGGTACCTTT-TCACAAGATGGGCT 1447 Query 1499 AGTGGAACAAATAAGCATGACCAGAGATAAAACAGATTATTTCTGGTATTTTACGGACAT 1558 |||||||| |||||||| |||||||| || |||||||||||||||||| | || ||||| Sbjct 1448 TGTGGAACAGATAAGCATCACCAGAGACAAGACAGATTATTTCTGGTATCTGACAGACAT 1507 Query 1559 TACAATTGGTTCTGATG-AGAGCTTCTTGAAGACTGGTGATA-ATCCTCTTCTTACCATT 1616 ||| || || |||||| | || ||| | ||||||||| | | ||||||||||| ||| Sbjct 1508 TACGATCAGTCCTGATGAAAAG-TTCCT---GACTGGTGA-AGACCCTCTTCTTACTATT 1562 Query 1617 TTTTCGGCTGGGCATGCTCTTCATGTATTCGTTAATGGCCTGCTTGCAGGAACTTCCTAT 1676 || |||||||||||||||||||||||||||||||| | ||| |||||||| | ||| Sbjct 1563 GGGTCAGCTGGGCATGCTCTTCATGTATTCGTTAATGGTCAGCTAGCAGGAACCGCTTAT 1622 Query 1677 GGAGCACTG-AGCAACTCAAAGCTCACATTTAGTCAAAATATCAAATTG-AGTGTAGGCA 1734 ||| ||||| || ||| ||||||| ||||||||||| || |||||||| | || ||| Sbjct 1623 GGATCACTGGAGAAAC-CAAAGCTAACATTTAGTCAGAAGATCAAATTACA-TGCAGGGG 1680 Query 1735 TCAACAAACTTGCTCTGCTT-AGTACTGCAGTGGGTCTTCCGAACGCTGGTGTGCATTAT 1793 | |||||||||||||| || |||| ||||| |||||||||||||| ||||||||||||| Sbjct 1681 TTAACAAACTTGCTCTA-TTGAGTATTGCAGCGGGTCTTCCGAACGTTGGTGTGCATTAT 1739 Query 1794 GAGACTTGGAATACTGGTA-TTCTAGGGCCAGTCACATTGAAGGGAGTAAACTCTGGAAC 1852 ||||||||||||||||| | |||| || ||||| ||| |||||||||| ||||| ||||| Sbjct 1740 GAGACTTGGAATACTGG-AGTTCTTGGCCCAGTGACACTGAAGGGAGTTAACTCCGGAAC 1798 Query 1853 ATGGGACATGTCTAAATGGAAGTGGTCTTACAAGATTGGT-CTTAGAGGTGAAGCTATGA 1911 ||||||||||||||||||||| |||||||||||||||||| || || ||||||| | ||| Sbjct 1799 ATGGGACATGTCTAAATGGAAATGGTCTTACAAGATTGGTACTAAG-GGTGAAGATCTGA 1857 Query 1912 GCCTTCACACCTTAGCTGGAAGTTC-AGCTGTGAAATGGTGGATCAAAGGA---TTCGTG 1967 || |||| ||| || | || ||||| | | ||| ||||| | || ||| || ||| Sbjct 1858 GCATTCATACCGTAACCGGGAGTTCCACC-GTGGAATGGAA-AG-AA-GGACCATTAGTG 1913 Query 1968 GTCAAGAAGCAACCCTTGACCTGGTACAAGTCTTCTTTTGATACACCGAGAGGCAACGAA 2027 | ||| |||||||| |||||||||||||||||| ||||||| ||||| | |||||| ||| Sbjct 1914 GCCAAAAAGCAACCTTTGACCTGGTACAAGTCTACTTTTGACACACCAACAGGCAATGAA 1973 Query 2028 CCACTGGCTTTGGACATGAACACAATGGGGAAAGGTCAAGTTTGGGTAAATGGACATAAC 2087 ||| ||||||| ||||||||||||||||||||||||||| ||| |||| || || ||| Sbjct 1974 CCATTGGCTTTAGACATGAACACAATGGGGAAAGGTCAAACATGGATAAACGGGCAGAAC 2033 Query 2088 ATTGGACGCCACTGGCCTGCCTACACGGCTCGTGGGAACTGTGGACGTTGCAACTATGCT 2147 ||||||||||||||||| || || || ||||||||||| || | ||| |||| ||| || Sbjct 2034 ATTGGACGCCACTGGCCGGCATATACAGCTCGTGGGAAATGCGAACGCTGCAGCTACGCC 2093 Query 2148 GGAA-TTTACAACGAGAAGAAATGTCTCAGTCACTGTGGTGAACCTTCTCAAAGATGGTA 2206 || | ||| || ||||||||||||| | ||| ||||||| ||| |||||||||||||||| Sbjct 2094 GGGACTTT-CACCGAGAAGAAATGTTTGAGTAACTGTGGAGAAGCTTCTCAAAGATGGTA 2152 Query 2207 CCATGTACCTCGTTCATGGCTAAAACCGTTTGGGAACCTTCTAGTTATATTTGAGGAATG 2266 ||||| ||||||||||||||||| || | |||||| ||||| || |||| ||||| Sbjct 2153 TCATGTGCCTCGTTCATGGCTAAAGCCAACTAATAACCTTGTAGTTGTACTTGAAGAATG 2212 Query 2267 GGGTGGTGATCC-AAGTGGAATCTCTCTTGTTAAAAGGACAGCCAAATGA-AGCTT-CTT 2323 ||||||||| || || ||| ||||||||||| ||||| | |||||||| | ||||| || Sbjct 2213 GGGTGGTGAACCCAA-TGGGATCTCTCTTGTAAAAAGAAGAGCCAAATAATAGCTTTCTG 2271 Query 2324 ACTTCAAATTTTTTCCGGA 2342 ||| || ||||||| ||| Sbjct 2272 ACTCCAT-TTTTTTCAGGA 2289 > Ahg917381 jgi|Araly1|917381|Al_scaffold_0008_2132 Length=2181 Score = 1613 bits (873), Expect = 0.0 Identities = 1789/2220 (81%), Gaps = 107/2220 (5%) Strand=Plus/Plus Query 142 ATTTTAGGA-ATAAAGCATGGATTATTCTGGCAATTCTGTGTT-TTTCATC-TTTGATT- 197 |||||| || ||||| | |||||| |||||| ||||| |||| ||| ||| || | || Sbjct 11 ATTTTA-GAGATAAATCCTGGATTTTTCTGGTGATTCTTTGTTGTTT-ATCATTGGTTTG 68 Query 198 CACTCAACAGAAGCAGT-GGTCACTTATGATCACAAAGCTTTAATCATCAATGGACAGAG 256 | | | | ||||| | ||| ||||||||| |||||| | |||||||||||||| || Sbjct 69 TA-T-AGTAAAAGCA-TCAGTCTCTTATGATCGTAAAGCTGTGATCATCAATGGACAAAG 125 Query 257 AAGGATCCTTATCTCCGGTTCTATACACTATCCAAGAAGCACTCCTGAGATGTGGCCTGA 316 ||| |||||| |||| ||||| || ||||||||| ||||||| |||||||||||||||| Sbjct 126 AAGAATCCTTCTCTCTGGTTCCATTCACTATCCACGAAGCACCCCTGAGATGTGGCCTGG 185 Query 317 TCTTATAAAGAAGGCCAAAGAAGGAGGTTTGGATGTTATACAAACATATGTTTTCTGGAA 376 || ||| |||| |||||||||||||| ||||||||||| | || |||||||| ||||| Sbjct 186 CCTCATACAGAAAGCCAAAGAAGGAGGCTTGGATGTTATTGAGACTTATGTTTTTTGGAA 245 Query 377 TGGACATGAACCTTCTCCTGGA-AATTACTATTTTCAG-GATAGATATGATCTGGTTAAA 434 ||| |||||||||||||||||| || || |||||| | || || |||||| ||||||| Sbjct 246 TGGCCATGAACCTTCTCCTGGACAA-TATTATTTT-GGAGACAGGTATGATTTGGTTAAG 303 Query 435 TTCACCAAACTGGTGCACCAAGCTGGACTATATCTTGATCTAAGAATTGGTCCATATGTT 494 |||| ||| |||||||||||||||| || ||| || |||| |||||||| || |||||| Sbjct 304 TTCATCAAGTTGGTGCACCAAGCTGGTCTCTATGTTAATCTCAGAATTGGCCCTTATGTT 363 Query 495 TGTGCCGAGTGGAATTTTGGGGGATTTCCGGTTTGGCTCAAATATGTTCCTGGTATGG-T 553 ||||| || ||||| ||||||||||||||||||||||| |||| |||||| ||||||| | Sbjct 364 TGTGCTGAATGGAACTTTGGGGGATTTCCGGTTTGGCTTAAATTTGTTCCCGGTATGGCT 423 Query 554 TTTCAGAACAGATAACGAACCTTTCAAGATTGCAATGCAA-AAATTCAC-AAAGAAGATT 611 ||| || || ||||| |||||||||||| ||||||| || |||||||| || |||||| Sbjct 424 TTT-AGGACGGATAATGAACCTTTCAAGGCTGCAATG-AAGAAATTCACTGAA-AAGATT 480 Query 612 G--TGGATATGATGAAAGAAGAAAAGCTGTTTGAGACTCAAGGAGGACCCATCATTC-T- 667 | ||| |||||||||| ||||||| ||||| | |||||||||||||||||||||| | Sbjct 481 GTATGG--ATGATGAAAGCAGAAAAGTTGTTTCAAACTCAAGGAGGACCCATCATTCTTG 538 Query 668 CTC----ACAGATAGAGAATGAGTATGGACCAATGCAATGGGAGATGGGAGCAGCAGGAA 723 | | |||||| |||||||| ||||||||| || ||||||| || |||||| |||||| Sbjct 539 CACAGGGACAGATTGAGAATGAATATGGACCAGTGGAATGGGAAATAGGAGCACCAGGAA 598 Query 724 AGGCTTACT-CAAAATGGACAGCTGAAATGGCATTGGGACTGTCCACAGGTGTCCCATGG 782 ||||||| | |||||||| |||| |||||||||| ||||| ||||| ||||| |||||| Sbjct 599 AGGCTTA-TACAAAATGGGTAGCTCAAATGGCATTAGGACTCTCCACTGGTGTTCCATGG 657 Query 783 ATTATGTGCAAGCAAGAGGATGCTCCTTAC-CCTATTATAGACACATGCAATGGATT-TT 840 ||||||||||||||||| |||||||||| | ||||| ||||||||||||||||| || || Sbjct 658 ATTATGTGCAAGCAAGAAGATGCTCCTT-CTCCTATCATAGACACATGCAATGG-TTATT 715 Query 841 ATTGTGAGGGTTTCAAACCAAACTC-AGACAATAAGCCGAAGTTGTGGACAGAGAACTGG 899 | ||||| | ||||||||||||||| || ||| ||||| ||| ||||||||||||| ||| Sbjct 716 ACTGTGAAGATTTCAAACCAAACTCAAG-CAACAAGCCAAAGATGTGGACAGAGAATTGG 774 Query 900 ACTGGTTGGTTCACGGAATTTGGAGGTGC-GATACCAAATAGACCAGTCGAAGACATTGC 958 |||||||||| ||| || ||||||||||| | ||||| | |||||||||||||| ||||| Sbjct 775 ACTGGTTGGTACACAGAGTTTGGAGGTGCTG-TACCATACAGACCAGTCGAAGATATTGC 833 Query 959 GT-TCTCCGTGGCTCGTTTCATACAGAACGGTGGTTCTTTTATGAATTATTATATGTATT 1017 | | || || || || |||||||| || || ||||| || | ||||| ||||||||| Sbjct 834 ATAT-TCTGTTGCACGATTCATACAAAAAGGAGGTTCCTTCGTCAATTACTATATGTATC 892 Query 1018 ATGGAGGGACCAACTTT-GATAGAACAGCCGGTGTTTTCATCGCCACTAGCTATGACTAC 1076 ||||| ||| ||| ||| || ||||||||||||| ||||| || | ||||||||||| Sbjct 893 ATGGA-GGAACAAATTTCGACAGAACAGCCGGTGAGTTCATGGCTTCAAGCTATGACTAT 951 Query 1077 GATGCTCCTATTGACGAATATGGATTACTAAGAGAACCCAAGTATAGTCACTTGAAAG-A 1135 || |||||| | || ||||| || |||| || |||||| ||||||||||||||||||| | Sbjct 952 GACGCTCCTCTCGATGAATACGGCTTACCAAAAGAACCAAAGTATAGTCACTTGAAAGCA 1011 Query 1136 GTTACATAAAGTCATCAAGC-TATGTGAACCTGCATTGGTCTCTGTTGATCCCACCATCA 1194 || |||||||||||||| | || |||| || || ||| | |||| |||| | || ||| Sbjct 1012 -TTGCATAAAGTCATCAAACTTA-GTGAGCCAGCTTTGCTTTCTGCTGATGCTACGGTCA 1069 Query 1195 CATCGCTCGGCGATAAACAAGAA-ATTCATGTGTTCAAGTCCAAGA-CTTCTTGCGCTGC 1252 ||||||| || | |||||||||| || |||||||| ||| || | | ||||| ||||| Sbjct 1070 CATCGCTTGGAGCTAAACAAGAAGCTT-ATGTGTTCTGGTCTAA-ATCATCTTGTGCTGC 1127 Query 1253 ATTTCTCTCGAACTACGA-CACGAGTTCTGCAGCAAGAGTTATGTTTAGGGGATTTCCGT 1311 |||| | |||||| | || | || |||||||| ||||||||||| | ||||| || | Sbjct 1128 ATTTTTATCGAACAAGGATGA-GAACTCTGCAGCGAGAGTTATGTTCCGTGGATTCCCAT 1186 Query 1312 ATGATTTGCCTCCTTGGTCTGTTAGTATTTTACCAGACTGCAAAACCGAATATTACAACA 1371 ||||||||||||||||||| || ||||||||||| || |||||||| || | |||||||| Sbjct 1187 ATGATTTGCCTCCTTGGTCAGTCAGTATTTTACCTGATTGCAAAACAGAGTTTTACAACA 1246 Query 1372 CTGCAAAGATCCGTGCACCAACCATACTTATGAAGATGATTCCTACAAGCA-CAAAGTTT 1430 |||||||| | |||||||| | ||| | ||| ||| ||||||| | | || | || Sbjct 1247 CTGCAAAGGTTAATGCACCAAGCGTACACAGGAATATGGTTCCTACTGGTACCAGA-TTC 1305 Query 1431 TCCTGGGAATCGTACAACGAAG-GAAGC-CCTTCTTCAAATGAAGCTGGTACATTTGTTA 1488 || |||| ||| | |||||||| | | | ||| || | |||||||| ||||| |||| | Sbjct 1306 TCTTGGGGATCATTCAACGAAGCG-A-CTCCTACTGCGAATGAAGCAGGTACGTTTG-CA 1362 Query 1489 A-AGATGGTCTAGTGGAACAAATAAGCATGACCAGAGATAAAACAGATTATTTCTGGTAT 1547 | | | || || |||||||| ||||||||||| | || ||| | || || ||||||||| Sbjct 1363 AGAAACGGGCTTGTGGAACAGATAAGCATGACTTGGGACAAATCTGACTACTTCTGGTAT 1422 Query 1548 TTTACGGACATTACAATTGGTTCTGATGAGAGC-TTCTTGAAGACTGGTGATAATCCTCT 1606 | || ||||||||||||||||| | ||||| | || ||||||||||||||| ||||| Sbjct 1423 CTAACAGACATTACAATTGGTTCCGGTGAGA-CATTTTTGAAGACTGGTGATTCCCCTCT 1481 Query 1607 TCTTACCATTTTTTCGGCTGGGCATGCTCTTCATGTATTCGTTAATGGCCTGCTTGCAGG 1666 |||||| || | || ||||| ||||| |||||||| || || ||||| | |||| |||| Sbjct 1482 TCTTACTGTTATGTCAGCTGGACATGCCCTTCATGTGTTTGTCAATGGGCAGCTTTCAGG 1541 Query 1667 AACTTCCTATGGAGCAC-TGAGCAACTCAAAGCTCACATTTAGTCAAAATATCAAA-TTG 1724 |||| | ||||||| || ||| | || |||| ||||| ||||| || || |||||| | Sbjct 1542 AACTGCTTATGGAGGACTTGA-CCACCCAAAACTCACCTTTAGCCAGAAGATCAAACTAC 1600 Query 1725 AGTGTAGGCATCAACAAACTTGCTCTGCTT-AGTACTGCAGTGGGTCTTCCGAACGCT-G 1782 | || ||| ||||||| |||||||| || ||| |||||||||||| ||||| | | | Sbjct 1601 A-TGCAGGTGTCAACAAGCTTGCTCT-TTTGAGTGTTGCAGTGGGTCTCCCGAATG-TCG 1657 Query 1783 GTGTGCATTATGAGAC-TTGGAATACTGGTA-TTCTAGGGCCAGTCACATTGAAGGGAGT 1840 || |||| ||| || ||||||| || | |||| || || ||||||||||||||||| Sbjct 1658 GTACACATTTTGA-ACAGTGGAATAAAGG-AGTTCTTGGTCCGGTCACATTGAAGGGAGT 1715 Query 1841 AAACTCTGGAACATGGGACATGTCTAAATGGAAGTGGTCTTACAAGATTGGTCTTAGA-G 1899 ||||| ||||||||||||||||| |||||||| ||||| || ||||||||| || | | Sbjct 1716 TAACTCAGGAACATGGGACATGTCGAAATGGAAATGGTCCTATAAGATTGGT-GTAAAGG 1774 Query 1900 GTGAAGCTATGAGCCTTCACACC-TTAGCTGGA-AGTTCAGCTGTGAAATGGTGGA-TCA 1956 |||||||| |||| ||||| ||| || | || ||||| | |||| | | |||| || Sbjct 1775 GTGAAGCTTTGAGTCTTCATACCGATA-C-CGAGAGTTCCGGTGTG--A-GATGGACTC- 1828 Query 1957 AAGG---ATTCGTGGTCAAGAAGCAACCCTTGACCTGGTACAAGTCTTCTTTTGATACAC 2013 |||| ||| |||| |||||||||||| |||||||||||||||||| |||||| ||||| Sbjct 1829 AAGGATCATTTGTGGCCAAGAAGCAACCATTGACCTGGTACAAGTCTACTTTTGCTACAC 1888 Query 2014 CGAG-AGGCAACGAACCACTGGCTTTGGACATGAACACAATGGGGAAAGGTCAAGTTTGG 2072 | || |||||| |||||| | ||||| ||||||||||||||||| ||||||||||||||| Sbjct 1889 C-AGCAGGCAATGAACCATTAGCTTTAGACATGAACACAATGGGAAAAGGTCAAGTTTGG 1947 Query 2073 GTAAATGG-ACATAACATTGGACGCCACTGGCCTGCCTACACGGCTCGTGGGAAC-TGTG 2130 ||||||| | | ||||||||||| || ||||| || || | ||||| ||| | |||| Sbjct 1948 ATAAATGGTAGA-AACATTGGACGTCATTGGCCAGCATATAAGGCTC-AAGGATCTTGTG 2005 Query 2131 GACGTTGCAACTATGCTGGAA-TTTACAACG-AGAAGAAATGTCTCAGTCACTGTGGTGA 2188 ||||||| ||||| ||||||| ||| ||||| | ||||||||| | ||| | |||||||| Sbjct 2006 GACGTTGTAACTACGCTGGAACTTT-CAACGCA-AAGAAATGTTTAAGTAATTGTGGTGA 2063 Query 2189 ACCTTCTCAAAGATGGTACCATGTACCTCGTTCATGGCTAAAACCGTTTGGGAACCTTCT 2248 | |||| |||||||||||||||||||||||||||||||| || || | ||| ||| | Sbjct 2064 AGCTTCACAAAGATGGTACCATGTACCTCGTTCATGGCTTAA---GTCTCAGAATCTTAT 2120 Query 2249 AGTTATATTTGAGGAATGGGGTGGTGATCC-AAGTGGAATCTCTCTTGTT-AAAAGGACA 2306 |||| | ||||| || |||||||||||||| || ||||||||| ||| | ||||| ||| Sbjct 2121 AGTTGTGTTTGAAGAGTGGGGTGGTGATCCTAA-TGGAATCTCA-TTGGTGAAAAGAACA 2178 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 94882800295 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5