BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G53420.1 Length=1374 Score E Sequences producing significant alignments: (Bits) Value Ahg485715 jgi|Araly1|485715|fgenesh2_kg.5__1707__AT3G53420.1 1777 0.0 Ahg482707 jgi|Araly1|482707|fgenesh2_kg.4__1767__AT2G37170.1 839 0.0 Ahg934366 jgi|Araly1|934366|scaffold_402354.1 568 5e-161 Ahg491143 jgi|Araly1|491143|fgenesh2_kg.7__576__AT4G35100.1 418 6e-116 Ahg485893 jgi|Araly1|485893|fgenesh2_kg.5__1885__AT3G54820.1 403 2e-111 > Ahg485715 jgi|Araly1|485715|fgenesh2_kg.5__1707__AT3G53420.1 Length=1272 Score = 1777 bits (962), Expect = 0.0 Identities = 1208/1318 (92%), Gaps = 52/1318 (4%) Strand=Plus/Plus Query 20 AAAATACAAACTTTCATTCcaaaaaaaaacctcaata-cacaaaaaaccaaa-aaaacat 77 |||||||||||| |||||||||||||||| || || || |||||| |||| |||| || Sbjct 1 AAAATACAAACTCTCATTCCAAAAAAAAAACT---TAGCATAAAAAA-CAAAGAAAA-AT 55 Query 78 ataacgttggcaaaaatactaaaaatattttttaaaagataaagcaataaaaaagtatac 137 ||||||||||||||||||||||||| | ||| | | ||||| ||| Sbjct 56 ATAACGTTGGCAAAAATACTAAAAACA---TTT------T-------T-AAAAA-TAT-- 95 Query 138 aaacaaattaacaagAAGGAGAGCTCTCACTATAAAACAGAGCACATGTTCTTCTCACTA 197 ||| || ||| || ||| | | | ||| | |||||||||||||||||||| |||||| Sbjct 96 -AAC-AA-TAA-AA-AAGTATA---CACACAAAAAAACAGAGCACATGTTCTTATCACTA 147 Query 198 ACCACTCCAACAGAGAAGCAAAAGaaaaaaaaGCTATTGTTTGAAAGAAGAAGAAGTTAA 257 |||||| ||||||||||||||||| ||||||||||| |||||| | ||||||||| ||| Sbjct 148 ACCACT-CAACAGAGAAGCAAAAG-AAAAAAAGCTACTGTTTG--A-AAGAAGAAGCTAA 202 Query 258 CTATGGCAAAGGATGTGGAAGCCGTTCCCGGAGAAGGATTTCAGACAAGAGACTATCAAG 317 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 203 ATATGGCGAAGGATGTGGAAGCCGTTCCCGGAGAAGGATTTCAGACAAGAGACTATCATG 262 Query 318 ATCCGCCACCAGCTCCGTTTATTGATGGAGCGGAGCTAAAGAAGTGGTCTTTCTACAGAG 377 ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 263 ATCCGCCGCCAGCTCCGTTTATTGATGGAGCGGAGCTAAAGAAGTGGTCTTTTTACAGAG 322 Query 378 CAGTTATCGCAGAGTTCGTAGCCACTCTCCTCTTCTTATACATCACCGTTTTGACAGTCA 437 |||| ||||| ||||||||||| |||||||||||||||||| ||||||||||||| |||| Sbjct 323 CAGTCATCGCCGAGTTCGTAGCTACTCTCCTCTTCTTATACGTCACCGTTTTGACTGTCA 382 Query 438 TCGGTTACAAGATTCAGTCCGATACTGATGCCGGTGGCGTAGATTGCGGCGGAGTTGGAA 497 |||||||||||||||||||||||||| | ||||| || ||||| |||||||||||||||| Sbjct 383 TCGGTTACAAGATTCAGTCCGATACTAAGGCCGGCGGGGTAGACTGCGGCGGAGTTGGAA 442 Query 498 TCCTCGGTATCGCTTGGGCCTTTGGTGGTATGATCTTCATCCTCGTCTACTGCACCGCCG 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 443 TCCTCGGTATCGCTTGGGCCTTTGGTGGTATGATCTTCATCCTCGTCTACTGCACCGCCG 502 Query 558 GTATCTCTGGTGGTCACATTAACCCAGCGGTGACATTTGGGCTATTCTTGGCACGTAAAG 617 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 503 GTATCTCTGGTGGTCACATTAACCCAGCGGTGACATTTGGGCTATTCTTGGCACGTAAAG 562 Query 618 TGTCGTTACCTAGGGCCCTATTGTACATAATCGCTCAGTGTTTGGGTGCGATTTGTGGAG 677 ||||||| ||||||||| |||||||||| | |||||||||||||||||||||||||||| Sbjct 563 TGTCGTTGCCTAGGGCCATATTGTACATTGTGGCTCAGTGTTTGGGTGCGATTTGTGGAG 622 Query 678 TTGGTTTTGTCAAAGCCTTCCAAAGCTCTTACTAC-ACCCGTTACGGAGGTGGAGCCAAC 736 |||| ||||||||||||||||||||||||||||| ||| ||||||| |||||||||||| Sbjct 623 TTGGATTTGTCAAAGCCTTCCAAAGCTCTTACTATGACC-GTTACGGCGGTGGAGCCAAC 681 Query 737 TCTCTAGCCGATGGCTACAGCACAGGGACCGGTCTAGCCGCAGAGATCATTGGTACTTTC 796 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 682 TCTCTTGCCGATGGCTACAGCACAGGGACCGGTCTAGCGGCAGAGATCATTGGTACTTTC 741 Query 797 GTTCTTGTCTACACCGTCTTCTCTGCCACTGACCCCAAACGTAGTGCCAGAGACTCCCAC 856 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 742 GTTCTTGTCTACACCGTCTTCTCTGCCACTGACCCCAAACGTAGTGCCAGAGACTCCCAC 801 Query 857 GTTCCGGTGTTGGCGCCACTTCCAATCGGATTTGCCGTGTTCATGGTACATTTGGCTACC 916 |||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||| Sbjct 802 GTTCCGGTGTTGGCGCCACTTCCAATCGGATTCGCGGTGTTCATGGTACATTTGGCCACC 861 Query 917 ATTCCCATTACCGGAACCGGAATTAACCCGGCAAGGAGTTTCGGAGCTGCCGTAATCTAC 976 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 862 ATTCCCATCACCGGAACCGGAATTAACCCGGCAAGGAGTTTCGGAGCTGCCGTAATCTTC 921 Query 977 AACAAGAGCAAGCCATGGGATGACCACTGGATATTTTGGGTTGGACCATTCATTGGAGCT 1036 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 922 AACAAGAGCAAGCCATGGGATGACCACTGGATATTTTGGGTTGGACCATTCATTGGAGCT 981 Query 1037 GCGATAGCTGCATTCTACCACCAATTCGTTCTGAGAGCTTCAGGTTCTAAGTCTCTTGGA 1096 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct 982 GCGATAGCTGCATTCTACCACCAATTCGTTCTGAGGGCTTCAGGTTCTAAGTCTCTCGGA 1041 Query 1097 TCATTCAGAAGTGCTGCCAACGTCTAAACACATCAAA-CCAGATTTCTCAAGAATAAATG 1155 || |||||||||||||||||||||||||| || |||| ||||||||||||| |||||||| Sbjct 1042 TCTTTCAGAAGTGCTGCCAACGTCTAAACCCACCAAAACCAGATTTCTCAATAATAAATG 1101 Query 1156 AAGTTGTGATCTCTCTGTACAAATCTAAATCAGTCACTTGCAGTTTTCATTTCCCTTTCT 1215 ||||||| |||||| |||||||||||||||| ||||||||||||||| |||| ||||| Sbjct 1102 AAGTTGTAATCTCT--GTACAAATCTAAATCAATCACTTGCAGTTTTCTTTTC--TTTCT 1157 Query 1216 TATAtttgtgttttccacttgctcttttgtgaattttcctt-cggtgtaattgttttttc 1274 ||| || |||||||| |||||||||||||||||||||||| || ||||||||||||| | Sbjct 1158 TAT-TT-GTGTTTTCTGCTTGCTCTTTTGTGAATTTTCCTTTCG-TGTAATTGTTTTTCC 1214 Query 1275 tttcgcttttAAA-CGAGTGATTGGAATTATAATCAATGAAATCAAAGAGGTTCTTAT 1331 ||||| |||| || ||||||||||||| || ||||||||||||||||||||||||||| Sbjct 1215 TTTCGTTTTTTAATCGAGTGATTGGAACTAAAATCAATGAAATCAAAGAGGTTCTTAT 1272 > Ahg482707 jgi|Araly1|482707|fgenesh2_kg.4__1767__AT2G37170.1 Length=998 Score = 839 bits (454), Expect = 0.0 Identities = 709/833 (85%), Gaps = 14/833 (2%) Strand=Plus/Plus Query 296 TTTCAGACAAGAGACTATC-AAGATCCGCCACCAGCTCCGTTTATT-GATG-GAGCGGAG 352 |||||||| || ||||| | | |||||||||||| | |||||| || || | | | |||| Sbjct 66 TTTCAGACGAGGGACTA-CGAGGATCCGCCACCAACACCGTTT-TTCGACGCG-GAGGAG 122 Query 353 CTAAAGAAGTGGTCTTTCTACAGAGCAGTTATCGCAGAGTTCGTAGCCACTCTCCTCTTC 412 || | |||||||||||| ||||||||||| ||||| ||||||||||| |||||||||||| Sbjct 123 CTTACGAAGTGGTCTTTATACAGAGCAGTCATCGCTGAGTTCGTAGCTACTCTCCTCTTC 182 Query 413 TTATACATCACCGTTTTGACAGTCATCGGTTACAAGATTCAGTCCGATACTGA-TGCCGG 471 || ||| ||||||||||||| || |||||||||||||||||||| || | | ||||| Sbjct 183 TTGTACGTCACCGTTTTGACTGTTATCGGTTACAAGATTCAGTCTGACA-AAACCGCCGG 241 Query 472 TGGCGTAGATTGCGGCGGAGTTGGAATCCTCGGTATCGCTTGGGCCTTTGGTGGTATGAT 531 ||| || || || ||||| |||||||||||||||||||| ||||| |||||||| ||||| Sbjct 242 TGGAGTTGACTGTGGCGGCGTTGGAATCCTCGGTATCGCGTGGGCTTTTGGTGGCATGAT 301 Query 532 CTTCATCCTCGTCTACTGCACCGCCGGTATCTCTGGTGGTCACATTAACCCAGCGGTGAC 591 |||||| || |||||||||||||| |||||||| ||||||||||| ||||| |||||||| Sbjct 302 CTTCATTCTTGTCTACTGCACCGCTGGTATCTCAGGTGGTCACATAAACCCGGCGGTGAC 361 Query 592 ATTTGGGCTATTCTTGGCACGTAAAGTGTCG-TTACCTAGGGCCCT-ATTGTACATAATC 649 ||||| | ||||||||||| || |||||| | | |||||| | || ||||| | Sbjct 362 GTTTGGTTTGTTCTTGGCACGGAAGGTGTCGCTGA-TTAGGGCGGTGCTT-TACATGGTG 419 Query 650 GCTCAGTGTTTGGGTGCGATTTGTGGAGTTGGTTTTGTCAAAGCCTTCCAAAGCTCTTAC 709 ||||||||||||||||| |||||||||||||| ||||| || || || |||||||||||| Sbjct 420 GCTCAGTGTTTGGGTGCTATTTGTGGAGTTGGGTTTGTGAAGGCTTTTCAAAGCTCTTAC 479 Query 710 TACACCCGTTACGGAGGTGGAGCCAACTCTCTAGCCGATGGCTACAGCACAGGGACCGGT 769 ||| |||||||| || |||||||||||||||||||| || |||| ||| || || || Sbjct 480 TACGTTCGTTACGGTGGAGGAGCCAACTCTCTAGCCGACGGTTACAACACTGGCACGGGA 539 Query 770 CTAGCCGCAGAGATCATTGGTACTTTCGTTCTTGTCTACACCGTCTTCTCTGCCACTGAC 829 || |||||||||||||| || || ||||| || |||||||| |||||||| |||||||| Sbjct 540 CTTGCCGCAGAGATCATCGGAACATTCGTGCTCGTCTACACAGTCTTCTCCGCCACTGAT 599 Query 830 CCCAAACGTAGTGCCAGAGACTCCCACGTTCCGGTGTTGGCGCCACTTCCAATCGGATTT 889 |||||||| | || ||||||||||||||||||||||||||||||||||| || || ||| Sbjct 600 CCCAAACGCAACGCTAGAGACTCCCACGTTCCGGTGTTGGCGCCACTTCCGATTGGGTTT 659 Query 890 GCCGTGTTCATGGTACATTTGGCTACCATTCCCATTACCGGAACCGGAATTAACCCGGCA 949 || ||||| |||||||||||||| || ||||| || ||||||||||| || |||||||| Sbjct 660 GCTGTGTTTATGGTACATTTGGCAACAATTCCGATCACCGGAACCGGTATCAACCCGGCT 719 Query 950 AGGAG-TTTCGGAGCTGCCGTAATCTACAACAAGAGCAAGCCATGGGATGACCACTGGAT 1008 ||||| ||| |||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct 720 AGGAGCTTT-GGAGCTGCCGTAATCTTTAACGAGAGCAAGCCATGGGATGACCACTGGAT 778 Query 1009 ATTTTGGGTTGGACCATTCATTGGAGCTGCGATAGCTGCATTCTACCACCAATTCGTTCT 1068 ||| ||||| |||||||||||||||||||| ||||||||||| || |||||||| || || Sbjct 779 ATTCTGGGTGGGACCATTCATTGGAGCTGCAATAGCTGCATTTTATCACCAATTTGTCCT 838 Query 1069 GAGAGCTTCAGGTTCTAAGTCTCTTGGATCATTCAGAAGTGCTGCCAACGTCT 1121 || ||||||||||| ||||| || ||||| ||||||||||| |||||||||| Sbjct 839 CAGGGCTTCAGGTTCCAAGTCACTCGGATCCTTCAGAAGTGCAGCCAACGTCT 891 > Ahg934366 jgi|Araly1|934366|scaffold_402354.1 Length=826 Score = 568 bits (307), Expect = 5e-161 Identities = 474/556 (85%), Gaps = 6/556 (1%) Strand=Plus/Plus Query 567 GTGGTCACATTAACCCAGCGGTGACATTTGGG-CTATTCTTGGCACGTAAAGTGTCG-TT 624 |||||||||| ||||| ||||||||| ||||| | |||||||| || || |||||| | Sbjct 250 GTGGTCACATAAACCCGGCGGTGACA-TTGGGATTGTTCTTGGCTCGGAAGGTGTCGCTG 308 Query 625 ACCTAGGGCCCT-ATTGTACATAATCGCTCAGTGTTTGGGTGCGATTTGTGGAGTTGGTT 683 | |||||| | || ||||| | ||||||||||||||||| |||||||||||||| | Sbjct 309 A-TTAGGGCGGTGCTT-TACATGGTGGCTCAGTGTTTGGGTGCTATTTGTGGAGTTGGGT 366 Query 684 TTGTCAAAGCCTTCCAAAGCTCTTACTACACCCGTTACGGAGGTGGAGCCAACTCTCTAG 743 |||| || || || ||||||||||||||| |||||||| || |||||||||||||||| Sbjct 367 TTGTGAAGGCTTTTCAAAGCTCTTACTACGTTCGTTACGGTGGAGGAGCCAACTCTCTAG 426 Query 744 CCGATGGCTACAGCACAGGGACCGGTCTAGCCGCAGAGATCATTGGTACTTTCGTTCTTG 803 |||| || |||| |||||| || || || |||||||||||||| || || ||||| || | Sbjct 427 CCGACGGTTACAACACAGGCACGGGACTTGCCGCAGAGATCATCGGAACATTCGTGCTCG 486 Query 804 TCTACACCGTCTTCTCTGCCACTGACCCCAAACGTAGTGCCAGAGACTCCCACGTTCCGG 863 ||||||| |||||||| |||||||| |||||||| | || ||||||||||||||||||| Sbjct 487 TCTACACAGTCTTCTCCGCCACTGATCCCAAACGCAACGCTAGAGACTCCCACGTTCCGG 546 Query 864 TGTTGGCGCCACTTCCAATCGGATTTGCCGTGTTCATGGTACATTTGGCTACCATTCCCA 923 |||||||||||||||| || || ||||| ||||| |||||||||||||| || ||||| | Sbjct 547 TGTTGGCGCCACTTCCGATTGGGTTTGCGGTGTTTATGGTACATTTGGCCACTATTCCGA 606 Query 924 TTACCGGAACCGGAATTAACCCGGCAAGGAGTTTCGGAGCTGCCGTAATCTACAACAAGA 983 | ||||||||||| || |||||||| |||||||||||||| |||||||||| ||||||| Sbjct 607 TCACCGGAACCGGTATCAACCCGGCCAGGAGTTTCGGAGCCGCCGTAATCTTTAACAAGA 666 Query 984 GCAAGCCATGGGATGACCACTGGATATTTTGGGTTGGACCATTCATTGGAGCTGCGATAG 1043 |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct 667 GCAAGCCATGGGATGACCACTGGATATTCTGGGTAGGACCATTCATTGGAGCTGCGATAG 726 Query 1044 CTGCATTCTACCACCAATTCGTTCTGAGAGCTTCAGGTTCTAAGTCTCTTGGATCATTCA 1103 ||||||| || |||||||| || || || || |||||||| ||||| || || || |||| Sbjct 727 CTGCATTTTATCACCAATTTGTCCTCAGGGCCTCAGGTTCCAAGTCACTCGGTTCCTTCA 786 Query 1104 GAAGTGCTGCCAACGT 1119 ||||||| || ||||| Sbjct 787 GAAGTGCAGCAAACGT 802 > Ahg491143 jgi|Araly1|491143|fgenesh2_kg.7__576__AT4G35100.1 Length=1045 Score = 418 bits (226), Expect = 6e-116 Identities = 610/786 (78%), Gaps = 64/786 (8%) Strand=Plus/Plus Query 317 GATCCGCCACCAGCTCCGTTTATT-G--ATGGAGCGGAGCT-AAAGAAGTGGTCTTTCTA 372 ||||| ||||||||||||||| || | |||| | ||||| ||| ||||||||||| Sbjct 129 GATCCTCCACCAGCTCCGTTT-TTCGACATGG-G-TGAGCTCAAA-TCCTGGTCTTTCTA 184 Query 373 CAGAGCAGTTATCGCAGAGTTCGTAGCCACTCTCCTCTTCTTATACATCACCGT-TTTGA 431 |||||| | ||||| |||||| | || || ||||||||| | ||| |||| || | | Sbjct 185 CAGAGCTCTCATCGCTGAGTTCATCGCTACACTCCTCTTCCTCTACGTCACTGTCGCT-A 243 Query 432 CAGTCATCGGTTACAAGATTCAGTCCGATACTGATGCCGGTGGCGTAGATTGCGGCGGAG 491 | |||||||| |||||| || | | | | ||||| || ||| | ||| | Sbjct 244 CTGTCATCGGCCACAAGA---AG--C-A-A---A--CCGGT-GC-----TTGTGACGGCG 285 Query 492 TTGGAATCCTCGGTATCGCTTGGGCCTTT-GGTGGTATGATCTTCATCCTCGTCTACTGC 550 |||| | ||||| |||||||||| |||| ||||||||||||||| ||||||| |||||| Sbjct 286 TTGGTTTACTCGGCATCGCTTGGG-CTTTCGGTGGTATGATCTTCGTCCTCGTTTACTGC 344 Query 551 ACCGCCGGTATCTCTGGTGGTCACATTAACCCAGCGGTGACATTTGGG-CTATTCTTGGC 609 ||||||||||||||||||||||||||||||||||| ||||| ||| || |||||||| || Sbjct 345 ACCGCCGGTATCTCTGGTGGTCACATTAACCCAGCTGTGAC-TTTCGGTCTATTCTTAGC 403 Query 610 ACGTAAAGTGTCGTTACCT-AGGGCCCTATTGT-ACATAATCGCTCAGTGT-TTGGGTGC 666 ||||| || || || | || || || | || |||| || ||||||||| |||| || Sbjct 404 CCGTAAGGTCTCTTTGG-TGAGAGCTCT-TGGTTACATGATAGCTCAGTGTCTTGGA-GC 460 Query 667 GATTTGTGGAGTTGGTTTTGTCAAAGCCTTCC--AAAGCTC-TTACTACACCCGTTACGG 723 |||||||| || ||||| || ||||| ||| ||| ||| |||| |||| | || || Sbjct 461 CATTTGTGGTGTGGGTTTCGTGAAAGCTTTCATGAAAACTCCTTACAACACTC-TT--GG 517 Query 724 AGGTGGAGCCAACTCTC-TAGCCGATGGCTACAGCACAGGGACCGGTCTAGCCGCAGAGA 782 || ||||| ||| | | |||| || |||||||||| ||| || | ||| | || |||| Sbjct 518 TGGAGGAGCTAACAC-CGTAGCTGACGGCTACAGCAAAGGAACTGCTCTCGGAGCTGAGA 576 Query 783 TCATTGGTACTTTCGTTCTTGTCTACACCGTCTTCTCTGCCACTGACCCCAA-ACGTAGT 841 | || || |||||||| ||||| |||||||| |||||||| |||||||| || | | || Sbjct 577 TTATCGGAACTTTCGTCCTTGTTTACACCGTTTTCTCTGCAACTGACCCTAAGA-GAAGC 635 Query 842 GC-CAGAGACTCCCACGTTCCGGTGTTGGCGCCACTTCCAATCGGATTTGCCGTGTTCAT 900 || | | ||||| ||| | || || ||||| ||||||||||| |||||||| |||||||| Sbjct 636 GCTC-GTGACTCTCACATCCCCGTTTTGGCTCCACTTCCAATTGGATTTGCTGTGTTCAT 694 Query 901 GGTACATTTGGCTACCATTCCCATTACCGGAACCGGAATTAACCCGGCAAGGAG-TTTCG 959 ||| ||||||||||| || |||||||||||||| || || ||||| ||||| || ||| | Sbjct 695 GGTGCATTTGGCTACTATCCCCATTACCGGAACTGGTATCAACCCAGCAAGAAGCTTT-G 753 Query 960 GAGCTGCCGTAATCTACAACAA-GAGCAAGCCATGGGATGACCACTGGATATTTTGGGTT 1018 | ||||| || ||||||||||| ||| ||| | ||||||||||| ||||| ||||||||| Sbjct 754 GTGCTGCTGTTATCTACAACAACGAG-AAGGCGTGGGATGACCAATGGATCTTTTGGGTT 812 Query 1019 GGACCATTCATTGG-AGCTGCGATAGCTGCATTC--T-ACCACCAATTCGT-TCTGAGAG 1073 || || ||| |||| ||| | |||||||| | | |||| |||| | | | |||||| Sbjct 813 GGTCCGTTC-TTGGGAGCA-C--TAGCTGCAGCCGCTTACCATCAATACATAT-TGAGAG 867 Query 1074 CTTCAG 1079 |||||| Sbjct 868 CTTCAG 873 > Ahg485893 jgi|Araly1|485893|fgenesh2_kg.5__1885__AT3G54820.1 Length=1150 Score = 403 bits (218), Expect = 2e-111 Identities = 579/747 (78%), Gaps = 49/747 (7%) Strand=Plus/Plus Query 358 GAAGTGGTCTTTCTACAGAGCAGTTATCGCAGAGTTCGTAGCCACTCTCCTCTTCTTATA 417 ||||||||||||||||||||| | ||||| |||||| ||||||||||||||||| | || Sbjct 178 GAAGTGGTCTTTCTACAGAGCTCTCATCGCTGAGTTCATAGCCACTCTCCTCTTCCTCTA 237 Query 418 CATCACCGTTTTGACAGTCATCGGTTACAAGATTCAGTCCGATACTGATG-CCGGTGGCG 476 |||||||| |||| |||||||||||||||| ||| ||||| | | | || | | Sbjct 238 TGTCACCGTTATGACTGTCATCGGTTACAAGAGCCAGACCGAT-C--AAGCCCTGAATCC 294 Query 477 TAGA-TTGCG-GC-GGAGTTGGAATCCTCGGTATCGCTTGGGCCTTTGGTGGTATGATCT 533 | || | | || || ||||| |||| |||||||| |||||||||||||| ||||||| Sbjct 295 T-GACCAGTGTGCAGGCGTTGGCGTCCTTGGTATCGCATGGGCCTTTGGTGGCATGATCT 353 Query 534 TCATCCTCGTCTACTGCACCGCCGGTATCTCTGGTGGTCACATTAACCCAGCGGTGACAT 593 ||||||||||||||||||||||||| ||||||||||| || ||||| || || ||||| | Sbjct 354 TCATCCTCGTCTACTGCACCGCCGGCATCTCTGGTGGCCATATTAATCCGGCCGTGACTT 413 Query 594 TTGGGCTATTCTTGGCACGTAAAGTGTCGTTACCT-AGGGCCCT-ATTGTACATAATCGC 651 ||||||| || ||||| || ||||| |||| | || || | || |||||| | || Sbjct 414 TTGGGCTGTTATTGGCTCGGAAAGTAACGTTGT-TGAGAGCAGTGAT-GTACATGGTGGC 471 Query 652 TCAGTGTTTGGGTGCGATTTGTGGAGTTGGTTTTG-TCAAAG-CCTTCCAAAGCT-CTTA 708 |||||| | ||||| |||||||| || || |||| |||| | ||||||| || |||| Sbjct 472 TCAGTGCCTCGGTGCCATTTGTGGTGT-GGCTTTGGTCAA-GTCCTTCCAGT-CTGCTTA 528 Query 709 CTACACCCGTTACGGAGGTGGAGCCAAC--TCTCTAGCCGATGGCTACAGCA-CAGGGAC 765 ||| | ||| ||||| || || || ||| ||||| ||||||| || |||| | || || Sbjct 529 CTATAACCGCTACGGTGGCGGCGCAAACGGTCTCT--CCGATGGTTATAGCATC-GGCAC 585 Query 766 CGGTCTAGCCGCAGAGATCATTGGTACTTTCGTTCTT-GTCTACACCGTCTTCTCTGCCA 824 |||| | ||||| |||||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct 586 CGGTGTTGCCGCCGAGATCATAGGTACATTCGT-CTTAGTCTACACCGTCTTCTCTGCCA 644 Query 825 CTGACCCCAA-ACGTAGTGC-CAGAGACTCCCACGTTCC-G---G---TGT-T-GGCGCC 873 |||||||||| | | ||||| | | ||||| ||||| || | | ||| | ||| || Sbjct 645 CTGACCCCAAGAGG-AGTGCGC-GTGACTCTCACGTCCCTGTAAGCCCTGTATTGGCTCC 702 Query 874 ACTT-CCAATCGGATTTGCCGTGTTCATGGTACATTTGGCTACCATTCCCATT-ACCGGA 931 || ||||| |||||||| |||||||| || || || ||||| || |||| | || || Sbjct 703 T-TTACCAATTGGATTTGCAGTGTTCATCGTTCACTTAGCTACAAT-CCCAATCACGGGC 760 Query 932 ACCGGAATTAACCCGGCAAGGAGTTTCGGAGCTGCCGTAATCTACAACAAG-AGCAA-GC 989 || || |||||||| ||||| ||| |||||||||| | |||||||||||| | ||| || Sbjct 761 ACTGGCATTAACCCTGCAAGAAGTCTCGGAGCTGCAATCATCTACAACAAGGA-CAAAGC 819 Query 990 CATGGGATGACCACTGGATATTTTGGGTTGGACCATTCATTGGAGCTGCGATAGCTGCAT 1049 |||||| | || |||||||| ||||| || || || || || || || || || | Sbjct 820 T-TGGGATCATCATTGGATATTCTGGGTGGGTCCGTTTGCGGGTGCAGCCATTGCGGCTT 878 Query 1050 TCTACCACCAATTCGT-TCTGAGAGCT 1075 ||||||| || || || | |||| ||| Sbjct 879 TCTACCATCAGTTTGTGT-TGAGGGCT 904 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 51427815033 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5