BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G53810.1 Length=2243 Score E Sequences producing significant alignments: (Bits) Value Ahg485775 jgi|Araly1|485775|fgenesh2_kg.5__1767__AT3G53810.1 3308 0.0 Ahg482773 jgi|Araly1|482773|fgenesh2_kg.4__1833__AT2G37710.1 1249 0.0 Ahg912015 jgi|Araly1|912015|Al_scaffold_0001_2269 854 0.0 > Ahg485775 jgi|Araly1|485775|fgenesh2_kg.5__1767__AT3G53810.1 Length=2186 Score = 3308 bits (1791), Expect = 0.0 Identities = 2070/2203 (94%), Gaps = 25/2203 (1%) Strand=Plus/Plus Query 49 ATGTTCGTCAAGCTCAAGCTCATCTTCTTC-T--TCTTCCTACTCTGTCAAATTATGATT 105 |||||| |||||||||||||| |||||||| | ||||||| |||||||||||| ||| Sbjct 1 ATGTTCATCAAGCTCAAGCTCGTCTTCTTCTTCATCTTCCTTCTCTGTCAAATTCTGAGA 60 Query 106 TCTTCCTCTCAAAATCTCAACTTCACCTACAATGGTTTCCATCCTCCATTAACAGATATC 165 ||||| ||||||| ||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct 61 TCTTCTTCTCAAACTCTCAACTTCACCTACAATGGCTTCCATCCTCCATTAAAAGATATC 120 Query 166 TCACTCCAAGGTCTCGCAACAGTAACACCCAATGGTCTCTTGAAGCTTACCAACACATCG 225 ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct 121 TCACTCCAAGGTCTCGCAACAGTCACACCCAATGGTCTCTTGAAGCTAACCAACACATCG 180 Query 226 GTACAAAAAACCGGTCACGCCTTCTGTACTG-AACGAATCCGGTTCAAAGATTC-CCAAA 283 ||||||||||||||||||||||||| ||| | || | ||||||||||||||||| || || Sbjct 181 GTACAAAAAACCGGTCACGCCTTCTATACCGAAAAG-ATCCGGTTCAAAGATTCTCC-AA 238 Query 284 ACGGCAACGTATCATCCTTCTCCACAACCTTCGTCTTCGCGATACATTCTCAGATCCCAA 343 ||||| |||| || || ||||| || |||||||||||||||||||| ||||||||||||| Sbjct 239 ACGGCTACGTTTCGTCTTTCTCTACCACCTTCGTCTTCGCGATACACTCTCAGATCCCAA 298 Query 344 CACTAAGCGGCCATGGAATCGCCTTCGTTGTAGCTCCAACGCTAGGTCTTCCTTTTGCAC 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 299 CACTAAGCGGCCATGGAATCGCCTTCGTTGTAGCTCCAACGCTAGGTCTTCCTTTTGCAC 358 Query 404 TTCCTAGTCAATACATCGGTCTCTTCAACATCTCTAACAATGGTAACGACACGAATCACA 463 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 359 TTCCTAGTCAATACATCGGTCTCTTCAACATCTCCAACAATGGTAACGACACGAATCACA 418 Query 464 TCTTTGCCGTCGAATTCGATACAATCCAGAGTAGCGAGTTTGGAGATCCAAACGATAATC 523 |||| ||||||||||||||||| || ||||| |||||||| ||||||||||||||||||| Sbjct 419 TCTTCGCCGTCGAATTCGATACTATTCAGAGCAGCGAGTTCGGAGATCCAAACGATAATC 478 Query 524 ACGTCGGAATCGATCTCAACGGTTTACGATCGGCGAATTACTCGACGGCGGGATA-TAGG 582 |||||||||||||| |||| ||||||||||||||||||||||||||||||||||| | || Sbjct 479 ACGTCGGAATCGATATCAATGGTTTACGATCGGCGAATTACTCGACGGCGGGATACT-GG 537 Query 583 GATGATCACGATAAGTTTCAGAATCTGAGTTTGATTAGTCGCAAACGGATCCAAGTTTGG 642 ||||||||||| |||||| |||||||||||||||||||||||||||||| || |||||| Sbjct 538 GATGATCACGACGAGTTTCGGAATCTGAGTTTGATTAGTCGCAAACGGATTCAGGTTTGG 597 Query 643 ATCGATTACGATAATCGTAGTCATCGAATTGATGTCACCGTGGCTCCGTTTGATTCTGAT 702 ||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||| ||| Sbjct 598 ATCGATTACGATAATCGGAGTCATCGAATCGATGTCACCATGGCTCCGTTTGATTCCGAT 657 Query 703 AAACCTAGAAAACCTCTAGTTTCGTATGTGAGAGATCTTTCTTCGATTCTTCTAGAAGAT 762 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 658 AAACCTAGAAAACCTCTAGTTTCGTATGTGAGAGATCTTTCTTCGATTCTTCTGGAAGAT 717 Query 763 ATGTATGTAGGTTTCTCATCTGCGACTGGTTCAGTTCTCTCGGAGCATTTCTTAGTCGGA 822 ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct 718 ATGTATGTAGGTTTCTCATCTGCTACTGGTTCAGTTCTCTCGGAGCATTTCGTAGTCGGA 777 Query 823 TGGAGTTTCCGGTTAAACGGAGAAGCTCCGATGCTCTCGTTATCGAAACTCCCGAAGCTT 882 ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| Sbjct 778 TGGAGTTTCCGGTTAAACGGAGAAGCTCCGATGCTTTTGTTATCGAAACTCCCGAAGCTT 837 Query 883 CCTCGATTTGAGCCTAGAAGAATCTCTGAATTCTACAAAATCGGTATGCCTTTGATTTCA 942 |||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 838 CCTCGATTCGAGCCGAGACGAATCTCTGAATTCTACAAAATCGGTATGCCTTTGATTTCA 897 Query 943 CTATCTCTGATCTTCTCTATCATCTTCCTCGCTTTCTACATCGTGAGGAGGAAGAAGAAG 1002 |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct 898 CTATCTCTGATCTTCTCTATTATCTTCCTCGCTTTCTATATCGTGAGGAGGAAGAAGAAG 957 Query 1003 TACGAGGAAGAGCTTGATGATTGGGAAACAGAGTTTGGGAAGAATCGATTCAGATTCAAG 1062 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 958 TACGAGGAAGAGCTTGATGATTGGGAAACAGAGTTTGGGAAGAATCGATTTAGATTCAAG 1017 Query 1063 GAGCTCTATCACGCGACCAAAGGTTTTAAGGAGAAGGATCTTCTCGGCTCCGGTGGATTT 1122 ||||| ||||| ||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct 1018 GAGCTTTATCATGCGACCAAAGGTTTTAAGGAGAAGGATCTTCTCGGATCTGGTGGATTT 1077 Query 1123 GGGAGAGTTTACAGAGGCATTTTACCAACGACGAAGCTTGAAGTCGCTGTGAAGAGAGTC 1182 ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct 1078 GGGAGAGTTTACAGAGGGATTTTACCGTCGACGAAGCTTGAAGTCGCTGTGAAGAGAGTC 1137 Query 1183 TCACATGATTCAAAACAAGGTATGAAAGAGTTTGTGGCGGAGATTGTGAGTATTGGTAGG 1242 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || Sbjct 1138 TCACATGATTCAAAACAAGGGATGAAAGAGTTTGTGGCGGAGATTGTGAGTATTGGTCGG 1197 Query 1243 ATGAGTCACCGGAATTTAGTTCCTCTCTTGGGTTACTGTCGCCGGAGAGGAGAGCTTCTT 1302 |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 1198 ATGAGTCACCGGAATTTAGTTCCTCTGTTGGGTTATTGTCGCCGGAGAGGAGAGCTTCTT 1257 Query 1303 TTGGTTTACGATTACATGCCTAATGGGAGCTTAGATAAGTATCTTTACAACAATCCGGAG 1362 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1258 TTGGTTTACGATTACATGCCTAATGGGAGCTTAGACAAGTATCTTTACAACAATCCGGAG 1317 Query 1363 ACTACC-TTAGATTGGAAACAAAGATCTACGATTATCAAAGGAGTTGCTTCAGGATTGTT 1421 | || | |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1318 A-TAACATTAGATTGGAAACAAAGATCTAAGATTATCAAAGGAGTTGCTTCAGGATTGTT 1376 Query 1422 CTATCTTCATGAGGAATGGGAACAAGTTGTGATTCACCGTGACGTGAAAGCTAGCAATGT 1481 |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1377 CTATCTCCATGAGGAATGGGAACAAGTTGTGATTCACCGCGACGTGAAAGCTAGCAATGT 1436 Query 1482 TCTGTTAGATGCTGATTTCAATGGTAGACTCGGTGATTTTGGGTTGGCTCGGTTGTATGA 1541 | ||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct 1437 TTTGTTAGACGCTGATTTCAATGGTAGACTCGGAGATTTTGGTTTGGCTCGGTTGTATGA 1496 Query 1542 TCACGGCTCGGATCCTCAGACCACTCACGTTGTTGGAACATTGGGTTACTTAGCACCTGA 1601 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1497 TCACGGGTCGGATCCTCAGACCACTCACGTTGTTGGAACATTGGGTTACTTAGCACCTGA 1556 Query 1602 ACATTCCCGGACTGGACGTGCCACTACCACGACTGATGTCTATGCGTTTGGTGCGTTTCT 1661 ||||||||||||||| || ||||| || ||||||| |||||||| |||||||||||||| Sbjct 1557 ACATTCCCGGACTGGGCGGGCCACGACTGCGACTGACGTCTATGCCTTTGGTGCGTTTCT 1616 Query 1662 TTTAGAAGTTGTTTCCGGTAGACGACCCATCGAGTTCCATAGTGCAAGCGATGATACGTT 1721 | |||||||||||||||||||||||||||| ||| ||||||| |||||||||||||| || Sbjct 1617 TCTAGAAGTTGTTTCCGGTAGACGACCCATTGAGATCCATAGCGCAAGCGATGATACATT 1676 Query 1722 CTTGCTTGTGGAATGGGTTTTCAGTTTGTGGCTCAGAGGTAACATAATGGAAGCGAAAGA 1781 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1677 CTTGCTTGTGGAATGGGTTTTTAGTTTGTGGCTCAGAGGTAACATAATGGAAGCGAAAGA 1736 Query 1782 TCCGAAGCTCGGTTCTTCAGGTTATGATCTTGAAGAGGTTGAAATGGTATTGAAACTCGG 1841 |||||| ||||| ||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct 1737 TCCGAATCTCGGGTCTTCAGGTTATGATCTTGTAGAGGTTGAAATGGTTTTGAAACTCGG 1796 Query 1842 TCTGTTGTGTTCGCATTCAGACCCTCGGGCTAGACCAAGTATGAGGCAGGTCTTACAATA 1901 ||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct 1797 CCTGTTGTGTTCTCATTCAGATCCTCGGGCTAGACCAAGTATGAGGCAGGTGTTACAATA 1856 Query 1902 TCTAAGAGGAGACATGGCACTGCCTGAATTAACGCCCTTGGATTTGTCGGCGGGGAGCGT 1961 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1857 TCTAAGAGGAGACATGGCACTGCCTGAATTAACGCCCTTGGATATGTCGGCGGGGAGCGT 1916 Query 1962 GATGAATCTGGGAGGCCGGGACGGTTTTAGCGGTATTGCAATGACTGATTTTTCCACTGT 2021 ||||||| ||||||||| ||||||||||||||||||||||||| |||| || ||| | || Sbjct 1917 GATGAATTTGGGAGGCCAGGACGGTTTTAGCGGTATTGCAATGTCTGACTTGTCCTCCGT 1976 Query 2022 GTTTAAAGGGTTTACCGGCGGATCTTCCATTGCTGACTCTCTACTCTCCGGTGGGAGGTG 2081 |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct 1977 GTTTAAAGGGTTTACCGGCGGATCTTCCATCGCTGAGTCTCTACTCTCCGGTGGGAGGTG 2036 Query 2082 ATGTTTGATGTTCCAACTCTAGCAAT-GTTTTATGTTTATAGtttttttAAAAAAGGTTT 2140 |||||||||||||||||||||||| | ||||||||||||||| ||||| ||| ||||| Sbjct 2037 ATGTTTGATGTTCCAACTCTAGCA-TCGTTTTATGTTTATAGCTTTTT-AAA---GGTTT 2091 Query 2141 ACTAATACGGATCATGTACATACATTTTTGCCTTTGTATGGAATATATAATTGAGTTTTT 2200 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2092 ACTAATGCGGATCATGTACATACATTTTTGCCTTTGTATGGAATATATAATTGAGTTTTT 2151 Query 2201 TGTGATATCTTATAAGAATTTATAGAGTATGAAGATTATGATT 2243 || |||| | | | || ||| | |||||||||||||||| Sbjct 2152 -GTTATAT-T-A-AC---TT-ATAAAATATGAAGATTATGATT 2186 > Ahg482773 jgi|Araly1|482773|fgenesh2_kg.4__1833__AT2G37710.1 Length=2166 Score = 1249 bits (676), Expect = 0.0 Identities = 1556/1970 (79%), Gaps = 104/1970 (5%) Strand=Plus/Plus Query 161 ATATCTCACTCCAAGGTCTCGCAACAGTAACACCCAATGGTCTCTTGAAGCTTACCAACA 220 ||||| || ||||||| || | || || |||||||| ||||||||||| || ||||||| Sbjct 114 ATATC-CA-TCCAAGGGATCACCACCGTCACACCCAACGGTCTCTTGAAACTAACCAACA 171 Query 221 C-ATCGGTACAAAAAACCGGTCACGCCTTCTGTACTGAACGAATCCGGTTCAAAGATTC- 278 | | | || || ||||||||||||||||||| ||| ||| ||||||||| |||||||| Sbjct 172 CGA-CCGTTCAGAAAACCGGTCACGCCTTCTACACTAAACCAATCCGGTTTAAAGATTCT 230 Query 279 CCAAAACGGCAACGTATCATCCTTCTCCACAACCTTCGTCTTCGCGATACATTCTCAGAT 338 || |||||||| ||| ||||||||||| ||||| ||||||||||| || || |||||||| Sbjct 231 CC-AAACGGCACCGTTTCATCCTTCTCGACAACTTTCGTCTTCGCTATTCACTCTCAGAT 289 Query 339 CCCAACACTAAGCGGCCATGGAATCGCCTTCGTTGTAGCTCC-AACGCTAGGTCTTCCTT 397 | | | || ||||||||||| ||||| || || || ||||| ||||| | ||||||||| Sbjct 290 CGCGATTCTCAGCGGCCATGGTATCGCTTTTGTCGTCGCTCCTAACGC-AAGTCTTCCTT 348 Query 398 TTGC-ACTTCCTAGTCAATACATCGGTCTCTTCAACATCTCTAACAATGGTAACGACACG 456 || || || || |||||||| ||||||||||||||||| ||||| ||||| ||||| Sbjct 349 ACGCAAC-GCCAAGCCAATACATAGGTCTCTTCAACATCTCAAACAACGGTAATGACACA 407 Query 457 AATCACATCTTTGCCGTCGAATTCGATACAATCCAGAGTAGC-GAGTTTGGA-GATCCAA 514 ||||| ||||||| || ||||| ||||| ||| ||||| | ||| || | ||| ||| Sbjct 408 AATCATGTCTTTGCTGTTGAATTAGATACGATCTTGAGTA-CAGAG-TTCAATGATACAA 465 Query 515 ACGATAATCACGTCGGAATCGATCTCAACGGTTT-ACGATC-G-GCGAA-TTACTCGACG 570 |||||||||| |||||||||||| |||| |||| | | || | || || || ||| | Sbjct 466 ACGATAATCATGTCGGAATCGATATCAATAGTTTGAAG-TCTGTGCAAAGTT-TTCG--G 521 Query 571 GC-GGGATATAGGGATGATCACGATAAGTTTC-AGAATCTGAGTTTGATTAGTCGCAAAC 628 || ||| ||| |||| || | | || ||| ||||||||| | |||| ||||| || | Sbjct 522 GCTGGG-TATTGGGACGAGAAAAACCAG-TTCAAGAATCTGACTCTGATCAGTCGTAAGC 579 Query 629 GGATCCAAGTTTGGATCGATTACGATAATCGTAGTC-A-TCGAATTGATGTCACCG-TGG 685 ||| || || ||| |||||||||| ||||| | | | ||| ||||| | || ||| Sbjct 580 CGATGCAGGTCTGGGTCGATTACGACGCTCGTA--CAACTAAAATCGATGTGA-CGATGG 636 Query 686 CTCCGTTTGATTCTGATAAACCTAGAAA-ACCTCTAGTTTCGTATGTGAGAGATCTTTCT 744 |||||||| | |||||||||| ||| ||| || |||||| ||| |||||||||||| Sbjct 637 CTCCGTTTAACGAGGATAAACCTA-AAAGACCGCTTGTTTCGGCTGTCAGAGATCTTTCT 695 Query 745 TCGATTCTTCTAGAAGATATGTATGTAGGTTTCTCATCTGCGACTGGTTCAGTTCTCTCG 804 ||| ||||||| ||||||||||||| |||||||| |||||||| || || ||||| ||| Sbjct 696 TCGGTTCTTCTCCAAGATATGTATGTGGGTTTCTCCTCTGCGACAGGCTCTGTTCTGTCG 755 Query 805 GAGCATT-TCTTAGTCGGATGGAGTTTCCGGTTAAACGGAGAA-GCT-C-CGA-TGCTCT 859 || |||| | || |||| ||||||||| |||| ||| || || ||| | | | || || Sbjct 756 GAACATTATGTT-CTCGGGTGGAGTTTCGGGTTGAAC-GAAAAGGCTCCACCATTG-GCT 812 Query 860 CGTTATCGAAACTCCCGAAGCTTCCTCGATTTGAGCCT-AGAAGAATCTCTGAATTCTAC 918 ||||||| |||||||||||||||| | || |||||| || ||||||||||| |||||| Sbjct 813 --TTATCGAGACTCCCGAAGCTTCCTAGGTTCGAGCCTAAG-AGAATCTCTGAGTTCTAC 869 Query 919 AAAATCGGTATGCCTTTGATTTCACTATCTCTGATCTTCTC-TATCATCTTCCTCGCTTT 977 || ||||| ||||| |||||||| || | | |||| ||||| | | |||||||||| ||| Sbjct 870 AAGATCGGGATGCCGTTGATTTCTCTGTTTTTGATTTTCTCGT-TTATCTTCCTCG-TTT 927 Query 978 -CTACATCGTGAGGAGGAAGAAGAAGTACGAGGAAGAGCTTGATGATTGGGAAACAGAGT 1036 ||||| |||||||||| || ||| | || ||| ||||| || |||||||||| ||||| Sbjct 928 GTTACATTGTGAGGAGGAGGAGGAAATTCGCGGAGGAGCTCGAGGATTGGGAAAAAGAGT 987 Query 1037 TTGGGAAGAATCGATTCAGATTCAAGGAGCTCTATC-ACGCGACCAAAGGTTTTAAGGAG 1095 ||||||||||||||||||| |||||||| | || | ||||||||||||| ||||||||| Sbjct 988 TTGGGAAGAATCGATTCAGGTTCAAGGATTTGTA-CTACGCGACCAAAGGGTTTAAGGAG 1046 Query 1096 AA-GGATCTTCTCGGCTCCGGTGGATTTGGGAGAGTTTACAGAGGCATTTTACCAAC-G- 1152 || ||| ||||| || | ||||| || ||||| ||||||| ||| | | || | | Sbjct 1047 AAGGGA-CTTCTTGGAACTGGTGGGTTCGGGAGTGTTTACAAAGGTGTGATGCC--CGGT 1103 Query 1153 ACGAAGCTTGAAG-TCGCTGTGAAGAGAGTCTCACATGATTCAAAACAAGGTATGAAAGA 1211 |||||| ||| || |||||||||| |||||||| || || || |||||| |||||||| Sbjct 1104 ACGAAG-TTGGAGATCGCTGTGAAAAGAGTCTCGCACGAGTCTCGACAAGGGATGAAAGA 1162 Query 1212 GTTTGTGGCGGAGATTGTGAGTATTGGTAGGATGAGTCACCGGAATTTAGTTCCTCTCTT 1271 |||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||| || Sbjct 1163 GTTTGTGGCGGAGATTGTGAGTATTGGTCGGATGAGTCATCGGAATTTAGTCCCTCTTTT 1222 Query 1272 GGGTTACTGTCGCCGGAGAGGAGAGCTTCTTTTGGTTTACGATTACATGCCTAATGGGAG 1331 |||||| ||||| ||||||| ||||||||| |||| || ||||||||||| ||||| || Sbjct 1223 GGGTTATTGTCGTAGGAGAGGTGAGCTTCTTCTGGTGTATGATTACATGCCCAATGGAAG 1282 Query 1332 CTTAGATAAGTATCTT-TACAACAATCCGGAGACTA-C-CTTAGATTGGAAACAAAG-AT 1387 |||||| ||||| ||| ||||||| ||||||| || | |||| |||||||||| || || Sbjct 1283 CTTAGACAAGTA-CTTGTACAACACTCCGGAGG-TAACACTTA-ATTGGAAACAGAGGAT 1339 Query 1388 CTACGATTAT-CAAAGGAGTTGCTTCAGGATTGTTCTATCTTCATGAGGAATGGGAACAA 1446 || | |||| | | || ||||| || || || ||||| ||||| ||||||||||||||| Sbjct 1340 -TAAGGTTATTCTA-GGCGTTGCCTCTGGCTTATTCTACCTTCACGAGGAATGGGAACAA 1397 Query 1447 GTTGTGATTCACCGTGACGTGAAAGCTAGCAATGTTCT-GTTAGATGCTGATTTCAATGG 1505 || ||||||||||| || || ||||| || || || || |||||||| || |||| || Sbjct 1398 GTGGTGATTCACCGGGATGTCAAAGCCAGTAACGT-CTTGTTAGATGGAGAGCTCAACGG 1456 Query 1506 TAGACTCGGTGATTTTGGGTTGGCTCGGTTGTATGATCACGGCTCGGATCCTCAGACCAC 1565 |||||||| ||||| || |||||||| |||||||||||||| ||||||||||||||||| Sbjct 1457 GAGACTCGGGGATTTCGGTTTGGCTCGTTTGTATGATCACGGGTCGGATCCTCAGACCAC 1516 Query 1566 TCACGTTGTTGGAACATTGGGTTACTTAGCACCTGAACATTCCCGGACTGGACGTGCCAC 1625 |||||||||||||||||||| |||||||| |||||||| | ||||| ||||||||||| Sbjct 1517 GCACGTTGTTGGAACATTGGGATACTTAGCTCCTGAACACACTCGGACAGGACGTGCCAC 1576 Query 1626 TACCACGACTGATGTCTATGCGTTTGGTGCGTTTCTTT-TAGAAGT-TGTTTCCGGTAGA 1683 || | |||||||| | ||| ||||| ||||| ||| | ||||| | | | |||||| Sbjct 1577 GACTGCTACTGATGTTTTTGCTTTTGGGGCGTT-CTTACTCGAAGTCTCCTGC-GGTAGA 1634 Query 1684 CGACCCATCGAGTTCCAT-AGTGCA-AGCGATGATACGTTCTTGCTTGTGGAATGGGTTT 1741 || || |||||| |||| | || | | |||||| ||||||||||| ||||| ||||||| Sbjct 1635 CGTCCTATCGAGATCCAGCA-TG-AGACCGATGAGACGTTCTTGCTCGTGGATTGGGTTT 1692 Query 1742 TCAGTTTGTGGCTCA-GAGGTAACATAATGGAAGCGAAAGATCCGAAGCTCGGTTCTTCA 1800 || | || ||| || | || ||||| ||| || ||||||||||| | ||||| | Sbjct 1693 TCGGGTTATGGAACAAGGGG-AACATCTTGGCTGCTAAAGATCCGAATATGGGTTCCGAA 1751 Query 1801 GGTTATGATCTTGAAG-AGGTTGAAATGGTATTGAAACTCGGTCTGTTGTGTTCGCATTC 1859 || |||| ||| |||| |||||||| ||||| || ||||| ||||| || || || Sbjct 1752 TGTGATGAA----AAGGAGGTCGAAATGGTTTTGAAGCTAGGTCTCTTGTGCTCTCACTC 1807 Query 1860 AGACCCTCGGGCTAGACCAAGTATGAGGCAGGT-CTTACAATATCTAAGAGGAGACATGG 1918 ||||| |||||||||||||||||||| || || || ||| ||||| |||||||| || Sbjct 1808 CGACCCACGGGCTAGACCAAGTATGAGACAAGTGCT-ACATTATCTTAGAGGAGA--TG- 1863 Query 1919 CACTG---CCTGAATTAACGCCCTTGGATTTGTCGGCGGGGAGCGTGATGAA-TCTGGGA 1974 || | || ||||| | || ||||| ||||| |||| || | ||||| | |||| Sbjct 1864 CAAAGTTACCAGAATTGTCTCCGTTGGACTTGTC--CGGG-AGTGGGATGATGTTTGGG- 1919 Query 1975 GGCCGGGACGGTTTTAGCGGTATT-GCAATGAC-TGATTTTTCCACTGTGTTTAAAGGGT 2032 | | ||||| ||||| | ||| | ||| | | ||| ||| | || || ||||||| Sbjct 1920 GTTCATGACGGATTTAGTGA-ATTAGGGATGTCGT-ATTCCTCCTCCGTATTCAAAGGGT 1977 Query 2033 TTACCGGCGGATCTTCCATTGCTGACTCTCTACTCTCCGGTGGGAGGTGA 2082 ||||||| ||||||||||| ||||| |||||||| || || ||||| ||| Sbjct 1978 TTACCGGTGGATCTTCCATCGCTGATTCTCTACTTTCTGGCGGGAGATGA 2027 > Ahg912015 jgi|Araly1|912015|Al_scaffold_0001_2269 Length=825 Score = 854 bits (462), Expect = 0.0 Identities = 506/528 (96%), Gaps = 0/528 (0%) Strand=Plus/Plus Query 621 TCGCAAACGGATCCAAGTTTGGATCGATTACGATAATCGTAGTCATCGAATTGATGTCAC 680 |||||||||||| || ||||||||||||||||||||||| ||||||||||| |||||||| Sbjct 264 TCGCAAACGGATTCAGGTTTGGATCGATTACGATAATCGGAGTCATCGAATCGATGTCAC 323 Query 681 CGTGGCTCCGTTTGATTCTGATAAACCTAGAAAACCTCTAGTTTCGTATGTGAGAGATCT 740 | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 324 CATGGCTCCGTTTGATTCCGATAAACCTAGAAAACCTCTAGTTTCGTATGTGAGAGATCT 383 Query 741 TTCTTCGATTCTTCTAGAAGATATGTATGTAGGTTTCTCATCTGCGACTGGTTCAGTTCT 800 ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct 384 TTCTTCGATTCTTCTGGAAGATATGTATGTAGGTTTCTCATCTGCTACTGGTTCAGTTCT 443 Query 801 CTCGGAGCATTTCTTAGTCGGATGGAGTTTCCGGTTAAACGGAGAAGCTCCGATGCTCTC 860 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | Sbjct 444 CTCGGAGCATTTCGTAGTCGGATGGAGTTTCCGGTTAAACGGAGAAGCTCCGATGCTTTT 503 Query 861 GTTATCGAAACTCCCGAAGCTTCCTCGATTTGAGCCTAGAAGAATCTCTGAATTCTACAA 920 |||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||| Sbjct 504 GTTATCGAAACTCCCGAAGCTTCCTCGATTCGAGCCGAGACGAATCTCTGAATTCTACAA 563 Query 921 AATCGGTATGCCTTTGATTTCACTATCTCTGATCTTCTCTATCATCTTCCTCGCTTTCTA 980 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 564 AATCGGTATGCCTTTGATTTCACTATCTCTGATCTTCTCTATTATCTTCCTCGCTTTCTA 623 Query 981 CATCGTGAGGAGGAAGAAGAAGTACGAGGAAGAGCTTGATGATTGGGAAACAGAGTTTGG 1040 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 624 TATCGTGAGGAGGAAGAAGAAGTACGAGGAAGAGCTTGATGATTGGGAAACAGAGTTTGG 683 Query 1041 GAAGAATCGATTCAGATTCAAGGAGCTCTATCACGCGACCAAAGGTTTTAAGGAGAAGGA 1100 |||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct 684 GAAGAATCGATTTAGATTCAAGGAGCTTTATCATGCGACCAAAGGTTTTAAGGAGAAGGA 743 Query 1101 TCTTCTCGGCTCCGGTGGATTTGGGAGAGTTTACAGAGGCATTTTACC 1148 ||||||||| || |||||||||||||||||||||||||| |||||||| Sbjct 744 TCTTCTCGGATCTGGTGGATTTGGGAGAGTTTACAGAGGGATTTTACC 791 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 84446073165 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5