BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G55110.1 Length=2533 Score E Sequences producing significant alignments: (Bits) Value Ahg485932 jgi|Araly1|485932|fgenesh2_kg.5__1924__AT3G55110.1 3740 0.0 Ahg938442 jgi|Araly1|938442|scaffold_502633.1 1818 0.0 Ahg488177 jgi|Araly1|488177|fgenesh2_kg.6__1311__AT5G13580.1 348 1e-94 > Ahg485932 jgi|Araly1|485932|fgenesh2_kg.5__1924__AT3G55110.1 Length=2493 Score = 3740 bits (2025), Expect = 0.0 Identities = 2332/2480 (94%), Gaps = 21/2480 (1%) Strand=Plus/Plus Query 55 TGGCTTCTAAAAGAAGATAACTAAAAATTTAAC----AAGGTTTATACTACTATGATACT 110 ||||| || ||||||||||||| ||| |||||| |||| || | | || ||| |||| Sbjct 28 TGGCTCCTGAAAGAAGATAACTGAAATTTTAACAAGTAAGGGTT-T-CCAC-ATG-TACT 83 Query 111 ACACTGTTAGCAGTTAGCTTCATCTTC-AG-CCACGCCGTTAAACTTCCATCAACCAAAA 168 |||||| | |||||||||||||| || || |||||||||| || |||||||||| Sbjct 84 ACACTG-T-----TTAGCTTCATCTTCAAGAATACACCGTTAAACTGCCGTCAACCAAAA 137 Query 169 ATAGTTAACTAAATCGTTGAAGATGCCACGTGTTTCGGCGGAAATTTTAGATATTTCTCA 228 | |||||||| ||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct 138 AGAGTTAACTTAATCGTTAAAGATGCCACGTGTTTCGGCGGAAATTTTAGATCTCTCTCT 197 Query 229 CACCGGCGGCAACGAGTCACCGACGCTTGGCGAACTCCTGAAAGATTTCAACGACAGTGG 288 ||||||||||||| | ||||||||||||| |||||| ||||||||||||||||||||||| Sbjct 198 CACCGGCGGCAACCAATCACCGACGCTTGCCGAACTGCTGAAAGATTTCAACGACAGTGG 257 Query 289 CCGGAAAAAATATCCCGGCGAAAATGCTCCGACTCAACACATATTGGATCTCGCTCCCGC 348 |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct 258 CCGGAAAAAATATCCCGGCGAAAATGCTCCGACTCATCACATCTTGGATCTCGCTCCCGC 317 Query 349 GGCTGAAACACGATCTGTGCCGTTTCTCTTATCCTTCAACAATCTCAGTTACAATGTTGT 408 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 318 GGCTGAAACACGATCTGTGCCGTTTCTCTTATCCTTCAACAATCTCAGTTACAATGTCGT 377 Query 409 ACTTCGCCGGCGGTTTGATTTCTCCCGGCGAAAGACCGCTTCGGTGAAGACTTTACTCGA 468 |||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct 378 ACTTCGCCGGTGGTTTGATTTCTCCCGACGAAAGACCGCTTCCGTGAAGACTTTACTCGA 437 Query 469 TGATATTACAGGCGAGGCTCGTGACGGAGAAATCCTCGCCGTTCTTGGTGGAAGCGGAGC 528 |||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||| Sbjct 438 TGATATTACAGGTGAGGCTTGTGACGGAGAAATCCTCGCCGTTCTGGGTGGAAGCGGAGC 497 Query 529 CGGAAAATCCACGTTGATAGACGCATTAGCCGGAAGAGTGGCGGAGGATAGCTTGAAAGG 588 ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||| Sbjct 498 TGGAAAATCCACTTTGATAGACGCATTAGCCGGAAGAGTGGCGGAGGATAGCCTGAGAGG 557 Query 589 CACGGTAACTCTAAACGGAGAAAAAGTTTTGCAATCTCGATTGTTGAAAGTGATATCGGC 648 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct 558 CACGGTAACTCTAAACGGAGAGAAAGTTTTGCAATCTCGATTGTTGAAAGTGATCTCGGC 617 Query 649 GTATGTGATGCAAGACGATCTTCTTTTTCCGATGCTCACCGTTAAAGAAACCCTAATGTT 708 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 618 GTATGTGATGCAAGACGATCTTCTTTTTCCGATGCTCACCGTCAAAGAAACCCTAATGTT 677 Query 709 CGCTTCCGAGTTTCGTCTCCCGAGAAGTTTGCCTAAATCGAAGAAGATGGAGCGTGTTGA 768 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 678 CGCTTCCGAGTTTCGTCTCCCGAGAAGTTTGCCTAAATCGAAGAAGATGGAGCGTGTTGA 737 Query 769 AACCCTAATTGACCAACTAGGGCTTAGAAACGCGGCGGATACGGTAATCGGAGATGAAGG 828 |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 738 AACCCTAATTGATCAATTAGGGCTTAGAAACGCGGCGGATACGGTAATCGGAGATGAAGG 797 Query 829 ACATCGTGGAGTATCTGGCGGAGAGCGACGGCGCGTGTCAATCGGAATTGATATTATACA 888 ||| |||||||| |||||||||||||||||||||||||||||||| |||||||| || || Sbjct 798 ACACCGTGGAGTCTCTGGCGGAGAGCGACGGCGCGTGTCAATCGGGATTGATATCATCCA 857 Query 889 CGATCCTATCCTCCTCTTCCTCGACGAACCAACGTCAGGGTTAGACTCCACCAATGCGTT 948 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 858 CGATCCTATCCTCCTCTTCCTCGACGAACCAACGTCGGGGTTAGACTCCACCAATGCGTT 917 Query 949 TATGGTGGTGCAGGTTTTGAAACGAATTGCTCAGAGTGGCAGTGTCGTAATTATGTCGAT 1008 |||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||| Sbjct 918 TATGGTGGTGCAGGTTTTGAAACGAATTGCGCAGAGTGGCAGTATTGTAATTATGTCGAT 977 Query 1009 CCATCAACCTAGTGCACGTATCATTGGTTTGCTTGATCGGCTTATCATCTTATCTCACGG 1068 |||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||| Sbjct 978 TCATCAACCTAGTGCTCGTATCATTGATTTGCTTGATCGGCTTATTATCTTATCTCACGG 1037 Query 1069 GAAGAGTGTGTTCAATGGATCTCCGGTTAGTCTTCCTTCGTTCTTCTCCAGCTTTGGCCG 1128 ||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||| || Sbjct 1038 GAAGAGTGTGTTCAATGGATCACCGGCTAGTCTTCCTTCGTTCTTCTCCAACTTTGGTCG 1097 Query 1129 TCCCATTCCAGAGAAAGAAAACATCACAGAGTTCGCACTTGATGTCATTCGAGAGCTTGA 1188 ||||||||| |||||||| |||||||||||||||||||||||||| |||||||| ||||| Sbjct 1098 TCCCATTCCGGAGAAAGAGAACATCACAGAGTTCGCACTTGATGTAATTCGAGAACTTGA 1157 Query 1189 AGGATCCTCTGAAGGAACCAGAGATTTAGTAGAATTCAACGAAAAGTGGCAACAGAACCA 1248 |||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||| Sbjct 1158 AGGATCCTCTGAAGGAACAAGAGGTTTAGTAGAGTTCAACGAAAAGTGGCAACAGAACCA 1217 Query 1249 AACTGCTAGAGCCACAACACAAAGTCGCGTATCTCTAAAAGAAGCCATCGCTGCAAGTGT 1308 | ||||| ||||||||||||||||| |||||||||| |||||||||||| |||||||||| Sbjct 1218 ATCTGCTCGAGCCACAACACAAAGTGGCGTATCTCTTAAAGAAGCCATCACTGCAAGTGT 1277 Query 1309 TTCTAGAGGGAAACTAGTCTCTGGCTCATCTGGAGCCAATCCTATATCAATGGAAACAGT 1368 ||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||||| Sbjct 1278 TTCTAGAGGGAAACTAGTCTCAGGCTCATCTGGAGCCAATCCTGTTTCAATGGAAACAGT 1337 Query 1369 ATCTTCATACGCAAACCCGCCATTGGCGGAAACGTTTATCTTAGCTAAACGGTACATAAA 1428 ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct 1338 ATCTTCATACGCAAACCCGCCATTGGCGGAAACATTTATCTTAGCCAAACGGTACATAAG 1397 Query 1429 AAACTGGATCCGCACGCCTGAGCTCATAGGAATGCGGATTGGTACTGTCATGGTGACTGG 1488 |||||||||||||||||| ||||| |||||||||||||| | ||||||||||||||| || Sbjct 1398 AAACTGGATCCGCACGCCGGAGCTTATAGGAATGCGGATCGCTACTGTCATGGTGACCGG 1457 Query 1489 TCTTCTCTTAGCTACTGTATATTGGAGGCTTGACAACACTCCAAGAGGTGCACAAGAGAG 1548 |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1458 TCTTCTCTTAGCCACTATATATTGGAGGCTTGACAACACTCCAAGAGGTGCACAAGAGAG 1517 Query 1549 AATGGGCTTCTTTGCGTTCGGTATGTCCACAATGTTCTATTGTTGTGCAGACAACATCCC 1608 |||||||||||| ||||||||||||||||| |||||||| |||||||| ||||||||||| Sbjct 1518 AATGGGCTTCTTCGCGTTCGGTATGTCCACCATGTTCTACTGTTGTGCGGACAACATCCC 1577 Query 1609 TGTTTTTATCCAAGAACGATACATTTTCTTGAGAGAGACAACGCACAACGCATACAGAAC 1668 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1578 TGTTTTTATCCAAGAACGATACATTTTCTTGAGAGAGACAACGCACAATGCATACAGAAC 1637 Query 1669 ATCTTCATATGTTATATCTCACGCTCTTGTGTCTCTGCCTCAGCTACTTGCTCTCTCCAT 1728 |||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct 1638 ATCTTCATATGTCATATCTCACGCCCTTGTGTCCCTGCCTCAGCTACTTGCTCTCTCCAT 1697 Query 1729 TGCATTTGCCGCAACTACATTTTGGACCGTTGGTTTGAGCGGCGGGTTAGAGAGTTTCTT 1788 ||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1698 TGCATTTGCTGCAACGACATTTTGGACTGTTGGTTTGAGCGGCGGGTTAGAGAGTTTCTA 1757 Query 1789 TTACTACTGCCTCATAATATACGCAGCCTTTTGGTCTGGATCCTCCATTGTTACTTTCAT 1848 ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct 1758 CTACTACTGCCTCATAATCTACGCAGCCTTTTGGTCTGGTTCCTCCATTGTTACTTTCAT 1817 Query 1849 TTCCGGT-TTAATTCCGAATGTCATGATGAGTTACATGGTCACTATTGCCTATCTTTCCT 1907 |||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1818 ATCCGGTCTTA-TTCCGAATGTCATGATGAGTTACATGGCCACTATTGCCTATCTTTCCT 1876 Query 1908 ATTGTCTACTGCTGGGTGGATTCTACATCAACCGGGATCGGATACCGTTGTACTGGATAT 1967 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1877 ATTGTTTACTGCTGGGTGGATTCTACATCAACCGGGATCGGATACCGTTGTACTGGATAT 1936 Query 1968 GGTTTCATTACATTTCGCTTCTGAAGTATCCCTACGAGGCTGTTCTAATCAATGAGTTTG 2027 |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct 1937 GGTTTCATTACATTTCGCTTCTCAAGTATCCCTACGAGGCTGTCCTAATCAATGAGTTTG 1996 Query 2028 ATGACCCGTCACGTTGTTTTGTAAAGGGAGTTCAAGTATTTGATGGTACGCTTTTGGCGG 2087 |||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||| Sbjct 1997 ATGACCCGTCTCGTTGTTTTGTTAAGGGAGTCCAAGTATTTGATGGTACGCTTTTGGCGG 2056 Query 2088 AAGTGTCCCATGTGATGAAGGTTAAGCTCCTAGATACACTGAGTGGCTCTTTAGGAACGA 2147 |||| ||||| |||||||||||||||| || |||||||||||| ||||||||||||| | Sbjct 2057 AAGTCCCCCATATGATGAAGGTTAAGCTTCTCGATACACTGAGTAGCTCTTTAGGAACCA 2116 Query 2148 AGATAACAGAGTCCACATGCTTGAGAACAGGACCTGACTTACTTATGCAGCAAGGTATAA 2207 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 2117 AGATAACAGAGTCCACATGCTTGAGAACAGGGCCTGACTTACTTATGCAGCAAGGTATAA 2176 Query 2208 CTCAATTGAGCAAGTGGGATTGCTTATGGATTACGTTAGCTTGGGGTCTCTTCTTTAGGA 2267 ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct 2177 CTCAATTGAGCAAGTGGGACTGCTTGTGGATTACGTTAGCTTGGGGTCTCTTCTTTAGGA 2236 Query 2268 TCTTGTTTTACTTGTCCTTGCTGTTCGGGAGTAAGAATAAGAGGACGTGAAGGTAGTCTA 2327 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct 2237 TCTTGTTTTACTTTTCCTTGCTGTTCGGGAGTAAGAATAAGAGGACGTGAAGGTAGTCCA 2296 Query 2328 CAAGCACAAAAACATACAACAAACGCATATAATATACGTTGTTGTAGTTTTCTAATCAAG 2387 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 2297 CAAGCACAAAAACATACAACAAACGCATATAATATACGTTGTTGTAGTTTTGTAATCAAG 2356 Query 2388 TTGTAACATTTTTAATTTTGTGTCATCATGGGAATATTGTAAAAGGATTTTTTCTTAAAA 2447 ||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 2357 TTGTAACATCTATAATTTTGTATCATCATGGGAATATTGTAAAAGGATTTTTTCTTAAAA 2416 Query 2448 TCCTTAGTATCATAATAATTACTCGAGTACACGATTAGATTTCAACATATGATTCAGTTG 2507 ||| |||||||||||| | |||| |||| |||||||||||||||||||||| ||||||| Sbjct 2417 TCCATAGTATCATAAT--T-ACTCTAGTATACGATTAGATTTCAACATATGACTCAGTTG 2473 Query 2508 AAGTTACTTAatatatatat 2527 |||||| ||||| || |||| Sbjct 2474 AAGTTATTTAATGTAAATAT 2493 > Ahg938442 jgi|Araly1|938442|scaffold_502633.1 Length=2231 Score = 1818 bits (984), Expect = 0.0 Identities = 1681/2007 (84%), Gaps = 90/2007 (4%) Strand=Plus/Plus Query 375 TCTTATCCTTCAACAATC-TCAGTTACAATGTTGTACTTCGCCGGCGGTTTGATTTCTCC 433 ||||| |||| ||||||| | | ||| ||||| |||| || || || |||||||||||| Sbjct 238 TCTTAGCCTTTAACAATCTTGA-ATACGATGTTATACTACGACGTCGTTTTGATTTCTCC 296 Query 434 CGGCG-A-AAG-ACCGCTTCGGTGAAGACTTTACTCGATGATATTACAGGCGAGGCTCGT 490 ||||| | ||| ||||||| ||||||||| |||||| || | || | ||||||||| || Sbjct 297 CGGCGAAGAAGCTCCGCTTCAGTGAAGACTCTACTCGGTGGTGTTTCCGGCGAGGCTTGT 356 Query 491 GACGGAGAAATCCTCGCCGTTCTTGGTGGAAGCGGAGCCGGAAAATCCACGTTGATAGAC 550 ||||| || ||||||||||||||||||| ||| ||||| || ||||| |||||||| || Sbjct 357 GACGGCGATATCCTCGCCGTTCTTGGTGCAAGTGGAGCAGGGAAATCAACGTTGATCGAT 416 Query 551 GCATTAGCCGGAAGAGTGGCGGA-GGATAGCTTGAAAGGCACGGTAACTCTAAACGGAGA 609 |||||||| || ||||| ||||| ||| ||||||| |||||||||||||||||||||||| Sbjct 417 GCATTAGCGGGGAGAGTTGCGGAGGGA-AGCTTGAGAGGCACGGTAACTCTAAACGGAGA 475 Query 610 AAAAGTTTTGCAATCTCGATTGTTGAAAGTGATATCGGCGTATGTGATGCAAGACGATCT 669 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 476 GAAAGTTTTGCAATCTCGATTGTTGAAAGTGATCTCGGCGTATGTGATGCAAGACGATCT 535 Query 670 TCTTTTTCCGATGCTCACCGTTAAAGAAACCCTAATGTTCGCTTCCGAGTTTCGTCTCCC 729 |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 536 TCTTTTCCCGATGCTCACCGTGAAAGAAACCCTAATGTTCGCTTCCGAGTTTCGTCTCCC 595 Query 730 GAGAAGTTTGCCTAAATCGAAGAAGATGGAGCGTGTTGAAACCCTAATTGACCAACTAGG 789 |||||||||| |||| |||||||||||||||||||||| | |||| ||||| ||| |||| Sbjct 596 GAGAAGTTTGTCTAAGTCGAAGAAGATGGAGCGTGTTGCAGCCCTCATTGATCAATTAGG 655 Query 790 GCTTA-GAAACGCGGCGGATACGGTAATCGGAGATGAAGGACATCGTGGAGTATCTGGCG 848 | ||| ||||||||||| | |||||||||||||| |||||||| |||||||| ||||| | Sbjct 656 G-TTAAGAAACGCGGCGAACACGGTAATCGGAGACGAAGGACACCGTGGAGTCTCTGGAG 714 Query 849 GAGAGCGACGGCGCGTGTCAATCGGAATTGATATTATACACGATCCTATCCTCCTCTTCC 908 ||||| ||||||| || ||||| ||||| |||||||| |||||||||||| |||| || | Sbjct 715 GAGAGAGACGGCGTGTTTCAATAGGAATCGATATTATCCACGATCCTATCGTCCTGTTTC 774 Query 909 TCGACGAACCAACGTCAGGG-TTAGACTCCACCAATGCGTTTATGGTGGTGCAGGTTTTG 967 | |||||||||||||| ||| || || ||||| || ||||||||||||||||| |||||| Sbjct 775 TTGACGAACCAACGTC-GGGATTGGATTCCACTAACGCGTTTATGGTGGTGCAAGTTTTG 833 Query 968 AAACGAATTGCTCAGAGTGGCAGTGTCGTAATTATGTCGATCCATCAACCTAGTGCACGT 1027 |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| || Sbjct 834 AAACGAATTGCTCAAAGTGGCAGTATCGTAATTATGTCGATCCATCAACCTAGTGCTCGA 893 Query 1028 ATCATTGGT-TTGCTTGATCGGCTTATCATCTTATCTCACGGGAAGAGTGTGTTCAATGG 1086 || | ||| |||||||||||||||||||||||||||| || || |||||||||||||| Sbjct 894 AT-AGTGGAGTTGCTTGATCGGCTTATCATCTTATCTCGTGGCAAAAGTGTGTTCAATGG 952 Query 1087 ATCTCCGGTTAGTCTTCCTTCG--TTCTTCTCC-AGCTTTGGCCGTCCCATTCCAGAGAA 1143 |||||||| ||||||||| || ||||||||| | ||| || || || || || ||||| Sbjct 953 ATCTCCGGCTAGTCTTCC--CGGATTCTTCTCCGA-CTTCGGTCGACCGATCCCGGAGAA 1009 Query 1144 AGAAAACATCACAGAGTTCGCACTTGATGTCA-TTCGAGAGCTTGAAGGATCCTCTGAAG 1202 ||| |||||||||||||||||||||||| | | |||||||||| ||||||||| | ||| Sbjct 1010 AGAGAACATCACAGAGTTCGCACTTGATTT-AGTTCGAGAGCTCGAAGGATCCAATCAAG 1068 Query 1203 GAACCAGAGATTTAGTAGAATTCAACGAAAAGTGGCAACAGAACCAA-A-CTG-CT-AG- 1257 |||| | || ||||||||| |||||||||||||||||||| ||| || | | | || | Sbjct 1069 GAACTAAAGCTTTAGTAGACTTCAACGAAAAGTGGCAACAAAAC-AAGATCAGTCTCATC 1127 Query 1258 -A----GC-C-ACAACAC-AA--AG-TCG--C--G--------T-ATCTCTAAAAGAAGC 1293 | || | |||| || || || ||| | | | |||| |||||||||| Sbjct 1128 CAATCTGCTCCACAA-ACCAATGAGCTCGAGCCAGACCGCGCATTATCTTTAAAAGAAGC 1186 Query 1294 CATCGCTGCAAGTGTTTCTAGAGGGAAACTAGTCTCTGGCTCATCTGGAGCCAATCCTA- 1352 |||| |||||||||||||||||| ||||||||||| ||||||||| || ||||||| | Sbjct 1187 CATCAATGCAAGTGTTTCTAGAGGCAAACTAGTCTCAGGCTCATCTAGATCCAATCCCAC 1246 Query 1353 TATCAATGGAAACAGTATCTTCATACGCAAACCCGCCATTGG-CGGAAACGTTTATCTTA 1411 | || |||||||||||||||||||||||||||||| | ||| || |||| || |||||| Sbjct 1247 T-TCGATGGAAACAGTATCTTCATACGCAAACCCGTCGTTGTTCG-AAACATTCATCTTA 1304 Query 1412 GCTAAACGGTACATAAAAAACTGGATCCGCACGCCTGAGCTCA-TAGGAATGCGGATTGG 1470 || |||||||| || |||||||||||||| | ||| ||||| | |||||| |||||| | Sbjct 1305 GCCAAACGGTATATGAAAAACTGGATCCGGATGCCCGAGCT-AGTAGGAACGCGGATCGC 1363 Query 1471 TACTGTCATGGTGACTGGT-CTTCTCTTAGCTACTGTATATTGGAGGCTTGACAACACTC 1529 ||| || |||||||||||| || |||||||| ||||| ||||||| ||| ||| |||| | Sbjct 1364 TACCGTAATGGTGACTGGTTCT-CTCTTAGCCACTGTTTATTGGAAGCTAGACCACACCC 1422 Query 1530 CAAGAGGTGCACAAGAGAGAATGGGCTTCTTTGCGTTCGGTA-TGTCCACAATGTTCTAT 1588 ||||||| |||||||||||| || ||| || || |||| | || |||||||||||||| Sbjct 1423 CAAGAGGAGCACAAGAGAGATTGACCTTGTTCGCATTCG-TCGTGCCCACAATGTTCTAT 1481 Query 1589 TGTTGTGCAGACAACATCCCTGTTTTTATCCAAGAACGATACATTTTCTTGAGAGAGACA 1648 |||||| |||||| |||| ||||||||||||||||||||||||||||| ||||||||| Sbjct 1482 TGTTGTTTAGACAATGTCCCCGTTTTTATCCAAGAACGATACATTTTCTTAAGAGAGACA 1541 Query 1649 ACGCACAACGCATACAGAACATCTTCATATGTTATATCTCACGCTCTTGTGTCTCTGCCT 1708 || ||||| || |||||||||||||||||||| ||||||||| |||| |||||||| ||| Sbjct 1542 ACACACAATGCTTACAGAACATCTTCATATGTCATATCTCACTCTCTAGTGTCTCTTCCT 1601 Query 1709 CAGCT-ACTTGCTCTCT-CCATT-GCATTTGCCGCAA-CTACATTTTGGACCGTTGGTTT 1764 ||||| | |||| | || || || | |||| |||| | | ||||| ||||| ||||| || Sbjct 1602 CAGCTCA-TTGCCC-CTTCC-TTAGTATTTTCCGCGATC-ACATTCTGGACGGTTGGATT 1657 Query 1765 GAGCGGCGGGTTAGAGAGTTTCTT-TTACTACTGCCTCATAATATACGCAGCCTTTTGGT 1823 ||||||||| |||||| ||||||| || || |||||| | || || || ||||||||| Sbjct 1658 GAGCGGCGGATTAGAGGGTTTCTTCTTT-TATTGCCTCCTGATCTATGCCTCCTTTTGGT 1716 Query 1824 CTGGATCCTCCATTGTTACTTTCATTTCCGGT-TTAATTCCGAATGTCATGATGA-GTTA 1881 ||||||| ||| |||| || ||||| || ||| || ||||| || ||||| | | |||| Sbjct 1717 CTGGATCTTCCGTTGTCACCTTCATATCAGGTGTTG-TTCCGCATATCATGTT-ATGTTA 1774 Query 1882 CATGGTCACTATTGCCTATCTTTCCTATTGTCTACTGCTGGGTGGATTCTACATCAACCG 1941 |||||| | ||| ||||||| |||| ||| ||||| || ||||||||||| ||||||| Sbjct 1775 CATGGTTGCCATTACCTATCTCGCCTACTGTTTACTGTTGAGTGGATTCTACGTCAACCG 1834 Query 1942 GGATCGGATACCGTTGTACTGGATATGGTTTCATTACATTTCGCTT-CTGAAGTATCCCT 2000 ||||| |||||||| ||||||| |||||||||||| ||||| || || |||||||||| Sbjct 1835 AGATCGAATACCGTTTTACTGGACATGGTTTCATTATATTTCA-TTGCTCAAGTATCCCT 1893 Query 2001 ACGAGGCTGTTCTA-ATCAATGAGTTTGATGACCCGTCACGTTGTTTTGTAAAGGGAGTT 2059 | ||||| || || ||||| ||||||||||||||||| ||||||||||| |||||||| Sbjct 1894 ATGAGGCAGT-CTTGATCAACGAGTTTGATGACCCGTCTCGTTGTTTTGTTAAGGGAGTC 1952 Query 2060 CAAGTATTT-GATGGTACGCTTTT-GGCGGAAGTGTCCCATGTGATG-AAGGTTAAGCTC 2116 || || ||| || |||| ||| | || ||| ||||| || | | ||||||||||| Sbjct 1953 CAGGT-TTTCGACAGTACTCTTCTCGGAGGA-GTGTCTGAT-TCCGGGAAGGTTAAGCTT 2009 Query 2117 CTAGATACACTGAGTGGCTCTTT-AGGAACGAAGATAACAGAGTCCACATGCTTGAGAAC 2175 || || || || |||| ||| | || ||||| |||||| ||||||||||||||||| || Sbjct 2010 CTTGAAACTCTCAGTGATTCTCTGAG-AACGAGGATAACGGAGTCCACATGCTTGAGGAC 2068 Query 2176 AGGACCTGACTTACTTATGCAGCAAGGTATAACTCAATTGAGCAAGTGGGATTGCTTATG 2235 || ||||||||||| ||||||||||| |||||||||| ||||||||||||||| || Sbjct 2069 TGGGTCTGACTTACTTGCACAGCAAGGTATTACTCAATTGAACAAGTGGGATTGCTTGTG 2128 Query 2236 GATTACGTTAGCTTGGGGTCTCTTCTTTAGGATCTTGTTTTACTT-GTCCTTGCTGTTCG 2294 ||||||||| |||| ||||||||| ||||||||||| |||||||| | |||||||||||| Sbjct 2129 GATTACGTTTGCTTCGGGTCTCTTTTTTAGGATCTTATTTTACTTCG-CCTTGCTGTTCG 2187 Query 2295 GGAGTAAGAATAAGAGGACGTGAAGGT 2321 |||| | |||||||||||||||||||| Sbjct 2188 GGAGCAGGAATAAGAGGACGTGAAGGT 2214 > Ahg488177 jgi|Araly1|488177|fgenesh2_kg.6__1311__AT5G13580.1 Length=2487 Score = 348 bits (188), Expect = 1e-94 Identities = 661/881 (75%), Gaps = 66/881 (7%) Strand=Plus/Plus Query 482 GAGGCTCGTGACGGAGAAATCCTCGCCGTTCTTGGTGGAAGCGGAGCCGGAAAATCCACG 541 |||||| | |||||||| || || || || || || | ||| || |||||||||| || Sbjct 511 GAGGCTAGAGACGGAGAGATACTAGCTGTGCTCGGAGCAAGTGGCTCCGGAAAATCGACA 570 Query 542 TTGATAGACGCATTAGCCGGAA--GAGTGGC-GGAGGATAGCTTGAAAGG-CACGGTAAC 597 |||| || ||||||| | || || | || |||| ||||||||||| || ||||| Sbjct 571 CTGATCGATGCATTAG-C-TAATCGAATCGCTAAAGGA-AGCTTGAAAGGAAAC-GTAAC 626 Query 598 TCTAAACGGAGAAAAAGTTTTGCAATCTCG--ATTGTTGAAAGTGATATCGGCGTATGTG 655 ||||||||||| ||||| | |||| ||| | || ||||| || || || |||||| Sbjct 627 TCTAAACGGAG---AAGTTCT-CAAT-TCGAAAATGCAGAAAGCCATCTCAGCTTATGTG 681 Query 656 ATGCAAGACGATCTTCTTTTTCCGATGCTCACCGTTAAAGAAACCCTAATGTTCGCTTCC 715 ||||||||||||||||||||||||||||| || ||| |||||||| ||||||| || || Sbjct 682 ATGCAAGACGATCTTCTTTTTCCGATGCTTACAGTTGAAGAAACCTTAATGTTTGCCGCC 741 Query 716 GAGTTTCGTCTCCCGAGAAG--TTTGCCTAAATCGAAGAAGATGGAGC-GTGTTGAAACC 772 ||||||||||| ||| |||| ||| | ||||| ||||||| | | |||| || | Sbjct 742 GAGTTTCGTCTTCCGCGAAGCCTTT-CG-AAATCAAAGAAGA-GTCTCCGTGTCCAAGCT 798 Query 773 CTAATTGACCAACTAGGGCTTAGAAACGCGGCGGATACGGTAATCGGAGATGAAGGACAT 832 | ||||| ||| |||| ||||||||||| || |||| || |||||||||||||| || Sbjct 799 TTGATTGATCAATTAGGACTTAGAAACGCAGCAAATACCGTGATCGGAGATGAAGGCCAC 858 Query 833 CGTGGAGTATCTGGCGGAGAGCGACGGCGCGTGTCAATCGGAATTGATATTATACACGAT 892 |||||| | ||||| |||||| | ||||| || ||||| ||||||||||| || || ||| Sbjct 859 CGTGGAATCTCTGGAGGAGAGAGGCGGCGAGTTTCAATTGGAATTGATATCATCCATGAT 918 Query 893 CCTATCCTCCTCTTCCTCGACGAACCAACGTCAGGGTTAG-ACTCCACCAA-TGCGTTTA 950 || || || || |||||||| |||||||| || ||||| | |||| || || ||| | || Sbjct 919 CCGATTCTGCTTTTCCTCGATGAACCAACCTC-GGGTTTGGACTCTAC-AAGTGC-TCTA 975 Query 951 TG-GTGGTGCAGGTT-TTGAAACGAATTGCTCAGAGTGGCAGTGTCGTAATTATGTCGAT 1008 | || | ||||| || |||||||| ||||||||||| ||| | || || ||| | | Sbjct 976 AGTGTCATTAAGGTTCTT-AAACGAATCGCTCAGAGTGGAAGTATGGTGATCATGACTCT 1034 Query 1009 CCATCAACCTAGTGCAC-GTAT-CATTGGTTTGCTTGATCGGCTTATCATCTTATCTCAC 1066 |||||||||||| || || | | || | ||||||||||| ||| || |||| || | | Sbjct 1035 TCATCAACCTAGTT-ACCGTCTTC-TTCGATTGCTTGATCGTCTTCTCTTCTTGTC-C-C 1090 Query 1067 G-GG--AAGAGTGTGTTCAATGGATCTCCGGTTA-GTCTTCCTTCG-TTCTT--CTCCAG 1119 | || || | ||| |||| ||||| || | | | || ||| || ||||| || || Sbjct 1091 GTGGCCAA-ACTGTCTTCAGCGGATCGCCTGCCATG-CTACCT-CGCTTCTTTGCTG-AG 1146 Query 1120 CTTTGGCCGTCCCA-TTCCAGAGAAA-GAAAACATCACAGAGTTCGCACTTG-ATGTCAT 1176 ||||||| |||| |||| || | | |||||| ||| |||||||| ||| || | || Sbjct 1147 -TTTGGCCA-CCCAATTCCCGA-ACACGAAAACCGCACCGAGTTCGCT-TTGGATTTGAT 1202 Query 1177 TCGAGAGCTTGAAGGATCCTCTGAAGGAACCAGA-GATTTAGTAGAATTCAACGAAAAGT 1235 || ||||| |||||||| ||| ||||| ||| | |||||| ||||||||| ||| || Sbjct 1203 CCGTGAGCTGGAAGGATCAGCTGGTGGAACAAGAAG-TTTAGTTGAATTCAAC-AAAGGT 1260 Query 1236 GGCA-ACAGAACCAAACTGCTAGAGCCAC-AACACAAAGTCGCGTATCTCT-AAAAGAAG 1292 | ||||| ||| || ||||||| ||| || | | || | || || |||||||| Sbjct 1261 TTTAGACAGAGG-AAA--GC-AGAGCCAAGAACTCAGACTGGCCTGTC-CTTAAAAGAAG 1315 Query 1293 CCATC-GCTGCAAGTGTTTCTAGAGGGAAACTAGTCTCTGG 1332 ||||| | |||||| | || | |||||| || |||||||| Sbjct 1316 CCATCAG-TGCAAGCATCTCCAAAGGGAAGCTCGTCTCTGG 1355 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 95492244215 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5