BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G55700.1 Length=1564 Score E Sequences producing significant alignments: (Bits) Value Ahg486004 jgi|Araly1|486004|fgenesh2_kg.5__1996__AT3G55700.1 1986 0.0 Ahg486005 jgi|Araly1|486005|fgenesh2_kg.5__1997__AT3G55710.1 1720 0.0 Ahg898513 jgi|Araly1|898513|Al_scaffold_0005_2479 1447 0.0 Ahg485040 jgi|Araly1|485040|fgenesh2_kg.5__1032__AT3G46670.1 76.8 4e-13 > Ahg486004 jgi|Araly1|486004|fgenesh2_kg.5__1996__AT3G55700.1 Length=1526 Score = 1986 bits (1075), Expect = 0.0 Identities = 1339/1466 (91%), Gaps = 20/1466 (1%) Strand=Plus/Plus Query 62 aaaaaaaaaCAAAGTC-AGTAAGAAAAATGGAAGAGAGAAAAGGGAGGAGAATAATCATG 120 |||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||| Sbjct 36 AAAAAAAAACAAAGTCAAG-AAGAAAAATGGAAGAGAGAAGAGGGAGGAGAATAATCATG 94 Query 121 TTCCCTCTTCCATTTCCAGGG-CACTTCAACCCCATGATCGAGCTCGCTGGAATATTCCA 179 |||||||| |||||| | ||| ||||||||||| ||||||||||| |||||||||||||| Sbjct 95 TTCCCTCTACCATTTGC-GGGACACTTCAACCCGATGATCGAGCTTGCTGGAATATTCCA 153 Query 180 CCACCGTGGCTTCTCCGTGACGATCCTCCACACTTCCTACAACTTCCCCGATCCTTCTCG 239 |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| Sbjct 154 CCACCGTGGCTTCTCCGTCACGATCCTCCACACTTCCTACAACTTTCCCGATCCTTCTCG 213 Query 240 CCACCCACACTTCACTTTTCGAACCATCTCTCACAACAAAGAAGGAGAAGAAGATCCTCT 299 |||||| ||||||||||||||| ||||| ||||||||||||||||||||||||| ||||| Sbjct 214 CCACCCTCACTTCACTTTTCGATCCATCCCTCACAACAAAGAAGGAGAAGAAGACCCTCT 273 Query 300 GTCTCAGTCAGAAACTTCGAGTATGGACCTAATCGTTCTCGTTCGTCGGCTGAAACAACG 359 ||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||| | Sbjct 274 ATCTCAGTCAGAAACTTCGAGTATGGACCTCATCGTTCTCATGCGTCGGCTGAAACAATG 333 Query 360 CTACGCCGA-ACCGTTTCGTAAGTCTGTGGCGGCGGAAGTAGGTGGAGGAGAGACGGTGT 418 ||||||||| | |||||||| ||||| |||| | |||||||||||||||||||||| ||| Sbjct 334 CTACGCCGAGA-CGTTTCGTCAGTCTTTGGCAGAGGAAGTAGGTGGAGGAGAGACGATGT 392 Query 419 GTTGTTTGGTCTCCGACGCTATATGGGGGAAGAACACGGAGGTTGTAGCGGAAGAGATTG 478 |||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||| Sbjct 393 GTTGTTTGGTCTCCGACGCTATATGGGGAAAGATCTCGGAGGTTGTAGCGGAAGAGATTG 452 Query 479 GAGTTCGTAGGGTGGTGTTGAGGACAGGTGGTGCGTCGTCGTTTTGTGCTTTTGCCGCTT 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 453 GAGTTCGTAGGGTGGTGTTGAGGACAGGTGGTGCGTCGTCGTTTTGTGCTTTTGCCGCTT 512 Query 539 TCCCTCTCCTTAGGGATAAGGGTTACCTCCCTATACAAGATTCTAGATTAGATGAGCCAG 598 |||||| |||||||||||||| |||||||||||||||||||||||||||||||||| || Sbjct 513 ACCCTCTGCTTAGGGATAAGGGATACCTCCCTATACAAGATTCTAGATTAGATGAGCTAG 572 Query 599 TGACAGAGCTTCCACCTTTGAAAGTGAAGGATCTTCCGGTAATGGAAACGAATGAGCCGG 658 ||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||| Sbjct 573 TGACAGAGCTTCCACCTTTGAAAGTTAAAGATCTTCCGGTAATGGAAACGAAAGAGCCGG 632 Query 659 AGGAACTTTACCGGGTAGTTAACGACATGGTGGAAGGAGCCAAGTCTTCTTCAGGAGTCA 718 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 633 AGGAACTTTACCGGGTAGTTAACGATATGGTGGAAGGAGCCAAGTCTTCTTCAGGAGTCA 692 Query 719 TATGGAACACATTTGAAGATCTTGAAAGACTATCACTTATGAATTGTAGCAGCAAATTAC 778 ||||||||||||||||||||||||||||||| ||||| ||| ||||||||| ||| |||| Sbjct 693 TATGGAACACATTTGAAGATCTTGAAAGACTCTCACTCATGGATTGTAGCAACAAGTTAC 752 Query 779 AAGTTCCATTTTTCCCGATCGGACCGTTTCACAAATATAGCGAAGATCCTACACCGAAGA 838 ||||||| |||||||| |||||||||||||||||| ||||||| |||| | ||| ||||| Sbjct 753 AAGTTCCGTTTTTCCCAATCGGACCGTTTCACAAACATAGCGACGATCATCCACTGAAGA 812 Query 839 CAGAGAACAAGGA--A-GATAC--CGA--T-T-GGCTCGACAAGCAAGACCCACAGTCGG 889 || |||||||||| | |||| | | | | |||| ||||||||||| |||||||| | Sbjct 813 CAAAGAACAAGGACGACGATAAAACAACCTGTTGGCTTGACAAGCAAGATCCACAGTCTG 872 Query 890 TGGTCTATGCGAGTTTCGGAAGCCTTGCAGCTATAGAAGAGAAGGAGTTTCTCGAGATTG 949 | ||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 873 TAGTCTACGTGAGTTTTGGAAGCCTTGCAGCTATAGAAGAGAAGGAGTTTCTCGAGATTG 932 Query 950 CTTGGGGTCTAAGAAACAGTGAACGACCGTTTTTGTGGGTGGTTAGGCCGGGGTCTG-TC 1008 |||||||||||||||||||| || ||| || ||||||||||||||||| ||| || || Sbjct 933 CTTGGGGTCTAAGAAACAGTAAATTACCATTCTTGTGGGTGGTTAGGCCAGGGA-TGGTC 991 Query 1009 AGGGGGACCGAGTGGCTCGAGTCATTGCCTT-TAGGGTTTATGGAAAACATTGGAGATAA 1067 | |||||||||||||| ||||||||||||| | |||||| ||||| ||||||| |||| Sbjct 992 CGAGGGACCGAGTGGCTTGAGTCATTGCCTTGT-GGGTTTTTGGAAGACATTGGTCATAA 1050 Query 1068 GGGAAAAATCGTGAAATGGGCGAATCAGTTAGAGGTATTGGCGCATCCTGCCATTGGAGC 1127 ||||||||| |||||||||| |||||| ||||||| ||||||||||||||| ||||||| Sbjct 1051 GGGAAAAATTGTGAAATGGGTGAATCAACTAGAGGTTTTGGCGCATCCTGCCGTTGGAGC 1110 Query 1128 GTTTTGGACACATTGTGGATGGAACTCGACACTAGAGAGCATATGTGAAGGTGTTCCTAT 1187 ||||||||| || || ||||||||||| ||||||||||||||||||||||||||||| || Sbjct 1111 GTTTTGGACGCACTGCGGATGGAACTCAACACTAGAGAGCATATGTGAAGGTGTTCCAAT 1170 Query 1188 GATATGTACGTCATGTTTCACGGACCAGCATGTGAACGCGAGATACATCGTTGATGTATG 1247 |||||||||| | |||||| | |||||||||||||||||||| ||||||||||||||||| Sbjct 1171 GATATGTACGCCGTGTTTCTCAGACCAGCATGTGAACGCGAGGTACATCGTTGATGTATG 1230 Query 1248 GCGAGTCGGGATGTTGTTAGAGAGAAGTAAGATGGAAAAGAAGGAGATTGAAAAGGTGCT 1307 ||||||||| ||| |||||||||||||||||||||||| |||||||||||| || | || Sbjct 1231 GCGAGTCGGTATGGTGTTAGAGAGAAGTAAGATGGAAATGAAGGAGATTGAGAATGCACT 1290 Query 1308 AAGAAGTGTAATGATGGAGAAGGGAGATGGATTGAGGGAAAGGAGTTTGAAGTTGAAAGA 1367 ||||||||||||||||||||||||||||| |||||| || |||||| ||||||| ||||| Sbjct 1291 AAGAAGTGTAATGATGGAGAAGGGAGATGAATTGAGAGAGAGGAGTCTGAAGTTAAAAGA 1350 Query 1368 GAGAGCTGATTTTTGCTTAAGTAAAGATGGGTCTTCTTCCAAGTATTTAGACAAACTTGT 1427 ||| |||||||||||||||| ||||||||| ||||| |||||| ||||||| |||||||| Sbjct 1351 GAGTGCTGATTTTTGCTTAACTAAAGATGGATCTTCGTCCAAGAATTTAGAAAAACTTGT 1410 Query 1428 GAGTCATGTCCTGTCTTTTGATTCTTATGCTTTTGCAAGTTAAGAAAACTTATGAATGAG 1487 ||||||||||||||||||| |||||||||||||||||||||| ||||| | ||||||||| Sbjct 1411 GAGTCATGTCCTGTCTTTTAATTCTTATGCTTTTGCAAGTTA-GAAAAATCATGAATGAG 1469 Query 1488 TAACGTATTCTAAGCACTCTCCAAAA 1513 ||| |||||||||||||||| ||||| Sbjct 1470 TAATGTATTCTAAGCACTCTTCAAAA 1495 > Ahg486005 jgi|Araly1|486005|fgenesh2_kg.5__1997__AT3G55710.1 Length=1417 Score = 1720 bits (931), Expect = 0.0 Identities = 1253/1406 (89%), Gaps = 31/1406 (2%) Strand=Plus/Plus Query 88 ATGGAAGAGAGAAAAGGGAGGAGAATAATCATGTTCCCTCTTCCATTTCCAGGG-CACTT 146 ||||||||||||||||||||||||||||||||||||||||| |||||| | ||| ||||| Sbjct 1 ATGGAAGAGAGAAAAGGGAGGAGAATAATCATGTTCCCTCTACCATTTAC-GGGACACTT 59 Query 147 CAACCCCATGATCGAGCTCGCTGGAATATTCCACCACCGTGGCTTCTCCGTGACGATCCT 206 |||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct 60 CAACCCGATGATCGAGCTTGCTGGAATATTCCACCACCGTGGCTTCTCCGTCACGATCCT 119 Query 207 CCACACTTCCTACAACTTCCCCGATCCTTCTCGCCACCCACACTTCACTTTTCGAACCAT 266 ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct 120 CCACACTTCCTACAACTTCCCTGATCCTTCTCGCCATCCACACTTCACTTTTCGAACCAT 179 Query 267 CTCTCAC-AACAAAGAAGGAGAAGAAGATCCTCTGTCTCAGTCAGA-A--ACTTCGAGTA 322 | ||||| || || |||||||||||||| ||||||||||| ||||| | ||||| ||| Sbjct 180 CACTCACGAA-AACGAAGGAGAAGAAGACCCTCTGTCTCAATCAGAGACGTCTTCGGGTA 238 Query 323 TGGACCTAATCGTTCTCGTTCGTCGGCTGAAACAACGCTACGCCGAACCGTTTCGTAAGT 382 |||||| |||| ||| || ||| |||||||||| |||| |||| |||||||| ||| Sbjct 239 AGGACCTTGTCGTCCTCATTAGTCTGCTGAAACAATGCTATACCGAGCCGTTTCGCCAGT 298 Query 383 CTGTGGCGGCGGAAGTAGGTGGAGGAGAGACGGTGTGTTGTTTGGTCTCCGACGCTATAT 442 || | || |||||||||| ||||||| |||||||||||||||| |||| |||||| ||| Sbjct 299 CTCTTGCAGCGGAAGTAGCCGGAGGAGGGACGGTGTGTTGTTTGATCTCTGACGCTCTAT 358 Query 443 GGGGGAAGAACACGGAGGTTGTAGCGGAAGAGATTGGAGTTCGTAGGGTGGTGTTGAGGA 502 |||||| |||||| |||||||||||||||||| ||||||||||||| |||||||||||| Sbjct 359 GGGGGAGGAACACCGAGGTTGTAGCGGAAGAGGTTGGAGTTCGTAGAATGGTGTTGAGGA 418 Query 503 CAGGTGGTG-CGTCGTCGTTTTGTGCTTTTGCCGCTTTCCCTCTCCTTAGGGATAAGGGT 561 ||||||||| ||| ||||||||||||| ||| ||||||||||||||||| ||||||||| Sbjct 419 CAGGTGGTGCCGT-ATCGTTTTGTGCTTATGCAGCTTTCCCTCTCCTTAGAGATAAGGGT 477 Query 562 TACCTCCCTATACAAGATTCTAGATTAGATGAGCCAGTGACAGAGCTTCCACCTTTGAAA 621 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| Sbjct 478 TACCTCCCTATACAAGATTCTAGATTAGATGAGCTAGTGACAGAGCTTCCACCTTTAAAA 537 Query 622 GTGAAGGATCTTCCGGTAATGGAAACGAATGAGCCGGAGGAACTTTACCGGGTAGTTAAC 681 |||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||| Sbjct 538 GTGAAGGATCTTCCGGTAATAGAAACAAAAGAGCCGGAGGAACTTTACCGGGTAGTTAAC 597 Query 682 GACATGGTGGAAGGAGCCAAGTCTTCTTCAGGAGTCATATGGAACACATTTGAAGATCTT 741 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 598 GACATGGTGGAAGGAGCCAAGTCTTCTTCAGGAGTCATATGGAACAGTTTTGAAGATCTT 657 Query 742 GAAAGACTATCACTTATGAATTGTAGCAGCAAATTACAAGTTCCATTT-TTCCCGATCGG 800 |||||||| ||||| ||| ||| | ||||||| ||||||||||| ||| ||||| ||||| Sbjct 658 GAAAGACTCTCACTCATGGATTCTCGCAGCAAGTTACAAGTTCC-TTTCTTCCCTATCGG 716 Query 801 ACCGTTTCACAAATATAGCGAA-GATCCTACACCGAAGACAGAGAACAAGGA--A-GAT- 855 ||||||||||||| || || || |||| | ||||||||||| |||||||||| | ||| Sbjct 717 ACCGTTTCACAAACATTGC-AACGATCTTCCACCGAAGACAAAGAACAAGGACGATGATG 775 Query 856 A--------CCGATTGGCTCGACAAGCAAGACCCACAGTCGGTGGTCTATGCGAGTTTCG 907 | |||||||||| |||||| |||| |||||||| |||||||||| |||||| | Sbjct 776 AAATATTAACCGATTGGCTTGACAAGGAAGATCCACAGTCTGTGGTCTATGTGAGTTTTG 835 Query 908 GAAGCCTTGCAGCTATAGAAGAGAAGGAGTTTCTCGAGATTGCTTGGGGTCTAAGAAACA 967 |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| Sbjct 836 GAAGCCTTGCAGCTATAGAAGAAAAGGAGTTTCTCGAGATTGCTTGGGGTCTAAAAAACA 895 Query 968 GTGAACGACCGTTTTTGTGGGTGGTTAGGCCGGGG-TC-TGTCAGGGGGACCGAGTGGCT 1025 | |||||||| || ||||||||||||||||||||| | || | | ||||||| |||||| Sbjct 896 GCGAACGACCATTCTTGTGGGTGGTTAGGCCGGGGATGGTG-C-GAGGGACCGGGTGGCT 953 Query 1026 CGAGTCATTGCCTT-TAGGGTTTATGGAAAACATTGGAGATAAGGGAAAAATCGTGAAAT 1084 ||||||||||||| | |||||| ||||||||||||| ||||||||||| | ||||||| Sbjct 954 TGAGTCATTGCCTTGT-GGGTTTTTGGAAAACATTGGTCATAAGGGAAAATTTGTGAAAT 1012 Query 1085 GGGCGAATCAGTTAGAGGTATTGGCGCATCCTGCCATTGGAGCGTTTTGGACACATTGTG 1144 ||| |||||| ||||||||||||| ||||||||| |||||||||||||||| || || | Sbjct 1013 GGGTGAATCAACTAGAGGTATTGGCTCATCCTGCCGTTGGAGCGTTTTGGACGCACTGCG 1072 Query 1145 GATGGAACTCGACACTAGAGAGCATATGTGAAGGTGTTCCTATGATATGTACGTCATGTT 1204 |||||||||| ||| ||||||||||||||||||| ||||| ||||| |||||| | |||| Sbjct 1073 GATGGAACTCAACAATAGAGAGCATATGTGAAGGCGTTCCAATGATTTGTACGCCGTGTT 1132 Query 1205 TCACGGACCAGCATGTGAACGCGAGATACATCGTTGATGTATGGCGAGTCGGGATGTTGT 1264 || ||||||||||||| ||||| || ||||| ||||||||||||||||| |||||| ||| Sbjct 1133 TCTCGGACCAGCATGTAAACGCTAGGTACATTGTTGATGTATGGCGAGTTGGGATGGTGT 1192 Query 1265 TAGAGAGAAGTAAGATGGAAAAGAAGGAGATTGAAAAGGTGCTAAGAAGTGTAATGATGG 1324 |||||||||| ||||| |||| |||||||||||| || | |||||||| ||||||||||| Sbjct 1193 TAGAGAGAAGCAAGATAGAAAGGAAGGAGATTGAGAATGCGCTAAGAATTGTAATGATGG 1252 Query 1325 AGAAGGGAGATGGATTGAGGGAAAGGAGTTTGAAGTTGAAAGAGAGAGCTGATTTTTGCT 1384 |||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct 1253 AGAAAGGAGATGGATTGAGAGAGAGGAGTTTGAAGTTGAAAGAGAGAGCTGATTTTTGCT 1312 Query 1385 TAAGTAAAGATGGGTCTTCTTCCAAGTATTTAGACAAACTTGTGAGTCATGTCCTGTCTT 1444 ||||||||||||| ||||||||||||||| |||| ||||||| |||||||||||||||| Sbjct 1313 TAAGTAAAGATGGTTCTTCTTCCAAGTATCTAGATGAACTTGTCAGTCATGTCCTGTCTT 1372 Query 1445 TTGATTCTTATGCTTTTGCAAGTTAA 1470 ||||||| || ||||||||||||||| Sbjct 1373 TTGATTCCTAGGCTTTTGCAAGTTAA 1398 > Ahg898513 jgi|Araly1|898513|Al_scaffold_0005_2479 Length=1392 Score = 1447 bits (783), Expect = 0.0 Identities = 1208/1409 (86%), Gaps = 45/1409 (3%) Strand=Plus/Plus Query 88 ATGGAAGAGAGAAAAGGGAGGAGAATAATCATGTTCCCTCTT-CCATTTCCAGGG-CACT 145 ||||| |||||||||| ||||| |||||||||||||||| || || ||||| ||| |||| Sbjct 1 ATGGATGAGAGAAAAGTGAGGAAAATAATCATGTTCCCT-TTACCGTTTCC-GGGACACT 58 Query 146 TCAACCCCATGATCGAGCTCGCTGGAATATTCCACCACCGTGGCTTCTCCGTGACGATCC 205 ||||||| |||||| | ||||| |||||||||||||||||||||||||||| ||||||| Sbjct 59 TCAACCCAATGATCCAACTCGCCAGAATATTCCACCACCGTGGCTTCTCCGTCACGATCC 118 Query 206 TCCACACTTCCTACAACTTCCCC-GATCCTTCTCGCCACCCACACTTCACTTTTCGAACC 264 |||||||||| | |||| ||||| ||||||||| | |||||| |||||||||||||||| Sbjct 119 TCCACACTTCATTCAAC-TCCCCAAATCCTTCTCACTACCCACTCTTCACTTTTCGAACC 177 Query 265 ATCTCTCACAACAAAGAAGGAGAAGAAGATCCTCTGTCTCAGTCAGAAACTTCGAGTATG 324 ||| |||||||||| ||||||| ||||||||||||| |||| ||||| |||| |||||| Sbjct 178 ATCCCTCACAACAACGAAGGAGGAGAAGATCCTCTGACTCAACCAGAAGCTTCTAGTATG 237 Query 325 GACCTAATCGTTC-TCGTTCGTCGGCTGAAAC-AACGCTACGCCGA-ACCGTTTCGTAAG 381 || || ||| | | |||| | ||||| || ||| ||| || || | |||||||| || Sbjct 238 GATCTTGTCG-CCTTTATTCGACTGCTGAGACAAAC-CTATGCGGAGA-CGTTTCGTCAG 294 Query 382 TCTGTGGCGGCGGAAGTAGGTGGAGGAGAGACGGTGTGTTGTTTGGTCTCCGACGCTATA 441 ||| ||||||||||||||||||||||||||||| |||||||||| |||||||| ||| | Sbjct 295 TCTCTGGCGGCGGAAGTAGGTGGAGGAGAGACGATGTGTTGTTTTGTCTCCGATGCTGTT 354 Query 442 TGGGGGAAGAACACGGAGGTTGTAGCGGAAGAGATTGGAGTTCGTAGGGTGGTGTTGAGG 501 |||| || |||||||||||| | ||| ||| || | ||||| ||||| || ||||||| Sbjct 355 TGGGCGAGGAACACGGAGGTCGCAGCCGAAAAGGTCGGAGTACGTAGAGTAGTGTTGATT 414 Query 502 ACAGGTGGTGCGTCGTCGTTTTGTGCTTTTGCCGCTTTCCCTCTCCTTAGGGATAAGGGT 561 ||| |||||| | ||||||||||||||||||| ||||||||||||||||| |||||| | Sbjct 415 ACAAGTGGTGTGGCGTCGTTTTGTGCTTTTGCTGCTTTCCCTCTCCTTAGAGATAAGCAT 474 Query 562 TACCTCCCTATACAAGATTCTAGATTAGATGAGCCAGTGACAGAGCTTCCACCTTTGAAA 621 ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| Sbjct 475 TACCTCCCTATACAAGAATCTAGATTAGATGAGCTAGTGACAGAGCTTCCACCTTTGAAA 534 Query 622 GTGAAGGATCTTCCGGTAATGGAAACGAATGAGCCGGAGGAACTTTACCGGGTAGTTAAC 681 || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 535 GTTAAGGATCTTCCGGTAATGGAAACGAATGAGCCGGAGGAACTATACCGGGTAGTTAAC 594 Query 682 GACATGGTGGAAGGAGCCAAGTCTTCTTCAGGAGTCATATGGAACACATTTGAAGATCTT 741 || ||||| |||||||| |||||||||||||| |||||||||||||||| ||||||||| Sbjct 595 GATATGGTTAAAGGAGCCGAGTCTTCTTCAGGACTCATATGGAACACATTCGAAGATCTT 654 Query 742 GAAAGACTATCACTTATGAATTGTAGCAGCAAATTACAAGTTCC-ATTTTTCCCGATCGG 800 |||||||| ||||| ||| ||| ||| ||||| || |||||||| || || |||||| || Sbjct 655 GAAAGACTCTCACTCATGGATTTTAGGAGCAAGTTTCAAGTTCCCATATT-CCCGATTGG 713 Query 801 ACCGTTTCACAAATATAGCGAAGATCCTAC-ACCGAAGACAGAGAACAAGGAAGA---T- 855 ||||||||||||| |||||||| ||| | | ||||| || | ||||||| ||||| | Sbjct 714 ACCGTTTCACAAACATAGCGAAAATCTT-CTACCGATGATAAAGAACAAAGAAGACCATG 772 Query 856 -A-C--C-GATTGGCTCGACAAGCAAGA-CCCACAGTCGGTGGTCTATGCGAGTTTCGGA 909 | | | ||||||||| | |||||||| |||| |||| || ||||||| ||||| || Sbjct 773 TAACAACCGATTGGCTCAATAAGCAAGATCCCA-AGTCTGTAGTCTATGTAAGTTTTGGG 831 Query 910 AGCCTTGCAGCTATAGAAGAGAAGGAGTTTCTCGAGATTGCTTGGGGTCTAAGAAACAGT 969 ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 832 AGCCTTGCAAATATAGAGGAGAAGGAGTTTCTCGAGATTGCTTGGGGTCTAAGAAACAGT 891 Query 970 GAACGACCGTTTTTGTGGGTGGTTAGGCCGGGGTCT-GTCAGGGGGACCGAGTGGCTCGA 1028 |||||||| |||||||||||||||||||| |||| | ||| | |||| |||||||| || Sbjct 892 GAACGACCCTTTTTGTGGGTGGTTAGGCCAGGGT-TAGTCCGAAGGACTGAGTGGCTGGA 950 Query 1029 -GTCATTGCCTTTAG-GG-TTTATGGAAAACATTGGAGATAAGGGAAAAATCGTGAAATG 1085 | |||||||| || || ||| ||||||||||||| | ||||||||| | || ||||| Sbjct 951 AG-CATTGCCT--AGTGGATTTGTGGAAAACATTGGCCAGAAGGGAAAATTTGTAAAATG 1007 Query 1086 GGCGAATCAGTTAGAGGTATTGGCGCATCCTGCCATTGGAGCGTTTTGGACACATTGTGG 1145 || |||||| |||||||||||||||||| |||| |||| || |||||||| |||||||| Sbjct 1008 GGTGAATCAATTAGAGGTATTGGCGCATTCTGCTGTTGGGGCATTTTGGACGCATTGTGG 1067 Query 1146 ATGGAACTCGACACTAGAGAGCATATGTGAAGGTGTTCCTATGATATGTACGTCATGTTT 1205 |||||||||||||||||| |||||||||||||||||||| ||||||||||| | ||||| Sbjct 1068 ATGGAACTCGACACTAGAAAGCATATGTGAAGGTGTTCCAATGATATGTACACCGTGTTT 1127 Query 1206 CACGGACCAGCATGTGAACGCGAGATACATCGTTGATGTATGGCGAGTCGGGAT-GTTGT 1264 |||||||||| |||||| ||||| ||||| ||||||||||||||| ||||||| | || Sbjct 1128 CACGGACCAGTTTGTGAATGCGAGGTACATTGTTGATGTATGGCGAATCGGGATTGA-GT 1186 Query 1265 TAGAGAGAAG-TAAGATGGAAAAGAAGGAGATTGAAAAGGTGCTAAGAAGTGTAATGATG 1323 |||||||| | || |||||| | |||||||||||| |||||| || ||||||||||||| Sbjct 1187 TAGAGAGA-GCTACGATGGATAGGAAGGAGATTGAGAAGGTGTTACGAAGTGTAATGATA 1245 Query 1324 GAG-AAGGGAGATGGA-TTGAGGGAAAGGAGTTTGAAGTTGAAAGAGAGAGCTGATTTTT 1381 || |||| |||| || || || || | | ||||||| ||||||||||||||| || ||| Sbjct 1246 AAGGAAGG-AGATTGAATT-AGAGAGATGTGTTTGAAATTGAAAGAGAGAGCTAATGTTT 1303 Query 1382 GCTTAAGTAAAGATGGGTCTTCTTCCA-AGTATTTAGACAAACTTGTGAGTCATGTCCTG 1440 ||||||||| ||||||||||||||||| | ||| |||||| |||||||| |||||||||| Sbjct 1304 GCTTAAGTATAGATGGGTCTTCTTCCATA-TATCTAGACACACTTGTGAATCATGTCCTG 1362 Query 1441 TCTTTTGATTCTTATGCTTTTGCAAGTTA 1469 ||||||||| |||||| | |||||||||| Sbjct 1363 TCTTTTGATCCTTATGATGTTGCAAGTTA 1391 > Ahg485040 jgi|Araly1|485040|fgenesh2_kg.5__1032__AT3G46670.1 Length=1588 Score = 76.8 bits (41), Expect = 4e-13 Identities = 60/69 (87%), Gaps = 2/69 (3%) Strand=Plus/Plus Query 1123 GGAGCGTTTTGGA-CACATTGTGGATGGAACTCGACACTAGAGAGCATATGTGAAGGTGT 1181 |||| |||||||| | || ||||||||||||||||||||||||||||| | ||||| || Sbjct 1202 GGAGGGTTTTGGAGC-CACTGTGGATGGAACTCGACACTAGAGAGCATCGGGGAAGGAGT 1260 Query 1182 TCCTATGAT 1190 ||| ||||| Sbjct 1261 TCCAATGAT 1269 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 58582796810 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5