BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G56140.1 Length=2565 Score E Sequences producing significant alignments: (Bits) Value Ahg486055 jgi|Araly1|486055|fgenesh2_kg.5__2047__AT3G56140.1 3812 0.0 Ahg483095 jgi|Araly1|483095|fgenesh2_kg.4__2155__AT2G40400.1 1986 0.0 Ahg922126 jgi|Araly1|922126|scaffold_103407.1 316 4e-85 Ahg932172 jgi|Araly1|932172|scaffold_400160.1 305 8e-82 Ahg942583 jgi|Araly1|942583|scaffold_603127.1 268 1e-70 Ahg914969 jgi|Araly1|914969|Al_scaffold_0001_5223 134 4e-30 > Ahg486055 jgi|Araly1|486055|fgenesh2_kg.5__2047__AT3G56140.1 Length=2448 Score = 3812 bits (2064), Expect = 0.0 Identities = 2338/2467 (95%), Gaps = 32/2467 (1%) Strand=Plus/Plus Query 79 GCTGACGTGTACAAACGGAGCTCTCTTCTCAGCTCTGGCCTCT--GAGAATGAAACTCAC 136 |||||||||||||||||||||||||||||| ||| |||| |||||||||||| || Sbjct 1 GCTGACGTGTACAAACGGAGCTCTCTTCTC--TTCT--TCTCTGAGAGAATGAAACTTAC 56 Query 137 CACGAATGATCTCTTCGCTTCTCAACCATTATTTCACTGCCCTTGCTCCTCCTCCTCCCG 196 ||| ||||||||||||||||||||||||||||| |||||||| ||||||| || | || Sbjct 57 CACAAATGATCTCTTCGCTTCTCAACCATTATTCCACTGCCCCTGCTCCT-CT--T-CC- 111 Query 197 TCCTCGCCGCCGACGTTTCTATGGCCTTCATTTTCCGATCAACCTCACCAGC-GAGAAGA 255 | |||| ||||| |||||| ||||||||||| |||||||||| ||||| | | ||||||| Sbjct 112 T-CTCGTCGCCGCCGTTTCCATGGCCTTCATCTTCCGATCAATCTCACTA-CTGAGAAGA 169 Query 256 ACAA-TTCTCTATCCATTGTTGCTCTTTCTGATTCCGATCTTCCATCACGAACCGCCTTC 314 | || || |||||||| ||||||||||||||||||||| ||||||| ||||||||| || Sbjct 170 ATAACTT-ACTATCCATCGTTGCTCTTTCTGATTCCGATGTTCCATCCCGAACCGCCGTC 228 Query 315 TCTCGCCGCGCTTTTCTACTCGCGCCACCACTTCTAGT-C-TCGGCTGCTTCCTTGTTTC 372 ||||||||||||||||| || || || ||||| || | | || ||||||||| |||||| Sbjct 229 TCTCGCCGCGCTTTTCTCCTGGCCCCGCCACTCCT-CTCCGTC-GCTGCTTCCCTGTTTC 286 Query 373 TCAAACCGTCTGTCTCTTTAGCCTCCGAGGAGAGCTCGTCCGCTACAGTAACATCGCCTG 432 |||| |||||||||||||||||| |||||| ||||||||||||||||||||| ||||||| Sbjct 287 TCAAGCCGTCTGTCTCTTTAGCCACCGAGGCGAGCTCGTCCGCTACAGTAACTTCGCCTG 346 Query 433 CGGAATCAGCAGctcctcctcctcct-c--ctGCGACCACAACACCGTCGCCGCCTCCAC 489 |||||||||||||||||||||||||| | | || || | || || |||||||| ||| Sbjct 347 CGGAATCAGCAGCTCCTCCTCCTCCTGCGACCGCCACTGCTCCATCGCCGCCGCCTGCAC 406 Query 490 CCGTGAATAAGGAAGAGACGATAACCTCGAGAATCTATGACGCGACGGCCATTGGTGAGC 549 |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 407 CCGTGAATGAGGAAGAGACTATAACCTCGAGAATCTATGACGCGACGGCCATTGGTGAGC 466 Query 550 CGATGGCTATGGGAAAAGATAAGAAGAAGGTGTGGGAGAAGCTGTTGAACGCGAGAGTTG 609 |||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||| Sbjct 467 CGATGGCTATGGGAAAAGATAAGAAGAAGGTGTGGGAGAAGCTGATGAATGCCAGAGTTG 526 Query 610 TGTACCTCGGTGAGGCGGAGCAAGTGCCTACCAAAGACGACAAAGAGCTTGAACTCGAAA 669 |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 527 TGTACCTCGGCGAGGCGGAGCAAGTTCCTACCAAAGACGACAAAGAGCTTGAACTCGAAA 586 Query 670 TCGTTAGAAACCTGAGGAAGAGATGCGTTGAGAGCGAGCGTCAAATCTCTGTAGCACTGG 729 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | Sbjct 587 TCGTTAGAAACCTGAGGAAGAGATGCGTTGAGAACGAGCGTCAAATCTCTGTAGCACTAG 646 Query 730 AAGCATTCCCTCTCGATTTGCAGGATCAGCTTAATCAATACATGGATAAGAGGATGGACG 789 ||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct 647 AAGCATTCCCTCTTGATTTGCAGGACCAGCTTAATCAATACATGGATAGGAGGATGGACG 706 Query 790 GAGAGACATTGAAGTCTTATGTGACACATTGGCCTGCTCAACGTTGGCAAGAATATGAGC 849 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 707 GAGAGACATTGAAGTCTTATGTGACACATTGGCCTGCTCAACGTTGGCAAGAATATGAGC 766 Query 850 CTCTTTTAAGTTATTGCCGCGATAACTCTGTTAGACTAATTGCTTGTGGCACTCCTCTCA 909 ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct 767 CTCTTTTAAGTTACTGTCGCGATAACTCTGTTAGACTAATTGCTTGTGGCACTCCTCTCA 826 Query 910 AGGTTTTAAGAACTGTCCAAGCAGAAGGTATCCGTGGTCTTTCAAAATCTGAGCGTAAAT 969 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 827 AGGTTTTAAGAACTGTCCAAGCAGAAGGTATCCGTGGTCTTTCAAAATCTGAGCGTAAAT 886 Query 970 TATACACTCCCCCTGCTGGTTCTGGGTTTATCTCAGGATTTTCTTCATTCTCACGTAGAT 1029 ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct 887 TATACACTCCCCCTGCTGGTTCTGGGTTTATTTCAGGATTTTCTTCCTTCTCACGTAGAT 946 Query 1030 CTACATTCGATATGAGTCTCCCAACACAGATTGTTCCTTTTGGACCGAGTTCATATTTGT 1089 ||||||| ||||||||||||||||||||||||||||| |||||||| ||||| ||||||| Sbjct 947 CTACATTTGATATGAGTCTCCCAACACAGATTGTTCCGTTTGGACCAAGTTCTTATTTGT 1006 Query 1090 CGGCACAAGCAAGAGTTGTTGAAGACCATACAATGTCACAAGTTATTTTACAAGCAGTAG 1149 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1007 CGGCACAGGCAAGAGTTGTTGAAGACCATACAATGTCACAAGTTATTTTACAAGCAGTAG 1066 Query 1150 CAGATGGAGGGGGTACTGGTCTACTGTTAGTGGTGACAGGGGCAAGTCATGTTGAGTATG 1209 ||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||| Sbjct 1067 CAGATGGAGGGGGTAGTGGTCTACTGTTAGTGGTAACAGGGGCGAGTCATGTTGAGTATG 1126 Query 1210 GTTCAAGAGGAACAGGTTTGCCAGCAAGGATCTCAAGGAAGTTTCCAAAGAAAAACCAAG 1269 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1127 GCTCAAGAGGAACAGGTTTGCCAGCAAGGATCTCAAGGAAGTTTCCAAAGAAAAACCAAC 1186 Query 1270 TTGTTGTATTACTTGACCCTGAAAGACAGTTCTTGCGAAGAGAGGGCGAAACTCCAGTTG 1329 |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1187 TTGTTGTATTACTTGATCCTGAAAGACAGTACTTGCGAAGAGAGGGCGAAACTCCAGTTG 1246 Query 1330 CTGATTTCTTGTGGTATTCTGCTGCAAGACCCTGCAGTAGAAACTGCTTTGACCGAGCAG 1389 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1247 CTGATTTCTTGTGGTATTCTGCAGCAAGACCCTGCAGTAGAAACTGCTTTGACCGAGCAG 1306 Query 1390 AGATTGCTCGAGTAATGAATGCAGCTGGCAGGAGGCGAGATGCCCTTCCTCCCGATATTC 1449 ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct 1307 AGATTGCTCGAGTAATGAATGCAGCTGGCAGGAGGCGAGATGCCCTTCCACCGGATATTC 1366 Query 1450 AAAATGGATTAGACCTTGGTCTGGTGTCACCTGAGGTTCTGCAGAATCTCTTTGATTTGG 1509 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1367 AAAATGGATTAGACCTTGGTCTGGTGTCACCTGAGGTTCTGCAGAATCTCTTTGATTTGG 1426 Query 1510 AGCAGTATCCTCTTATTTCTGAGCTTACTCAGCGGTTTCAGGGTTTCCGAGAAAGGTTGT 1569 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1427 AGCAGTATCCTCTTATTTCTGAGCTTACTCAGCGGTTTCAGGGTTTCCGAGAAAGGTTGT 1486 Query 1570 TGGCAGATCCAAAATTCCTGAATAGGTTAGCCATCGAAGAAGCTATATCAATAACAACTA 1629 ||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||| Sbjct 1487 TGGCAGATCCAAAATTCCTGAATAGATTAGCTATCGAAGAGGCTATATCAATAACAACTA 1546 Query 1630 CACTAATAGCACAATATGAGAAGCGAAAAGAGAATTTCTTTGAAGAAATTGACTATGTTA 1689 || |||||||||||||||||||||| | ||||||||||||||||||||| |||||||||| Sbjct 1547 CATTAATAGCACAATATGAGAAGCGGAGAGAGAATTTCTTTGAAGAAATCGACTATGTTA 1606 Query 1690 TAACTGATACAGTGAGAGGATCAGTCGTTGATTTTTTCACAGTTTGGCTTCCTGCACCAA 1749 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1607 TAACTGATACAGTGAGAGGATCAGTCGTTGATTTTTTCACAGTTTGGCTTCCTGCACCAA 1666 Query 1750 CTTTGTCTTTTCTTTCATATGCTGATGAGACCACTGGACCAGACAGCATAGACGCCCTGA 1809 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1667 CTTTGTCTTTTCTTTCATATGCTGATGAGACCACTGGACCAGACAGCATAGACGCCCTGA 1726 Query 1810 GAGGCCTCCTAGGATCCATACCTGATAACGCATTTCAAAAAAGTCTTGCTGGAAGAGAGT 1869 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1727 GAGGCCTCCTAGGATCCATACCTGATAACGCATTTCAAAAAAGTCTTGCTGGAAGAGAGT 1786 Query 1870 GGAACCTGAATCTTAGAATTGCTTCAGTTATTGTTGGTGGCTTGAAGCTTGCTGGTGTTG 1929 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1787 GGAACCTGAATCTTAGAATTGCTTCAGTTATTGTTGGTGGCTTGAAGCTTGCTGGTGTTG 1846 Query 1930 GAGTTGTTTCCAGTTTTGCAGCTGTGGGAGCTTCAAATGCATTGAATATAGCACGAAAGG 1989 ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct 1847 GAGTTGTTTCCAGTTTTGCAGCTGTGGGAGCTTCAAATGCATTGAATGTAGTACGAAAGG 1906 Query 1990 TCATTAAACCCGAGCTGGTTGTGGCTGAGAAACCTAAGAGGTCTCCTCTTCTGAAGACGG 2049 |||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1907 TCATTAGACCCGAGTTGGTTGTTTCTGAGAAACCTAAGAGGTCTCCTCTTCTGAAGACGG 1966 Query 2050 CAATGGTTTACGGAGGTTTTCTGGGAACATCTGCAAATCTTCGTTACCAGATAATTGCGG 2109 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1967 CAATGGTTTATGGAGGTTTTCTGGGAACATCTGCAAATCTTCGTTACCAGATAATTGCGG 2026 Query 2110 GATTAATAGAGCATCGCCTATCTGATGAGCTTTCTTCGCAACCTCTACTTGTAAATGCTA 2169 ||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||| Sbjct 2027 GATTAATAGAGCATCGCCTTTCTGATGAGCTTTCCTCTCAACCTCTACTTGTAAATGCTA 2086 Query 2170 TTTCATTTGTTGTCAGGACCCTAAACTCATATTTCGGAACGCAGCAATGGATCGATCTTG 2229 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 2087 TTTCATTTGTTGTCAGGACCCTAAACTCATATTTTGGAACGCAGCAATGGATCGATCTTG 2146 Query 2230 CACGCTCTACGGGTCTGCAAACTCAGAAAAGCATCCCAGCCTCTAAAGAAATTTCAGAGG 2289 |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 2147 CACGCTCTACAGGTCTGCAAACTCAGAAAAGCATCCCAGCCTCTAAAGAAATTCCAGAGG 2206 Query 2290 CTTTGGAAGAACCGACAGTGGAATGCGATACTACTACTGAAGAGGAAAGTATCGATAAGC 2349 ||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct 2207 CTTTGGAAGAATCGACGGTGGAATGCGATACTACTACTGAAGAGGAAAGTATCGACAAGC 2266 Query 2350 TCAATAATCAATGATACTGGTGAGGCTACCCCACTAGTTATCAATTAATAGTTGTTTGCC 2409 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 2267 TCAATAATCAATGATACTGGTGAGGCTACCCCACTAGTTATCAA--AATAGTTGTTTGCC 2324 Query 2410 ATATAAGCTTTAGATCGTAGAAATTAGCATATAATAATTTCACATTTCTTAAGTTGTATG 2469 ||| | |||||||||||||||||| |||||| | |||||||||| ||||||||||||||| Sbjct 2325 ATA-A-GCTTTAGATCGTAGAAATGAGCATA-A-TAATTTCACAATTCTTAAGTTGTATG 2380 Query 2470 TTCGTACATGTGCTT---GGCAAATAGTGATGGTTTCAATATAAATTTGTTGTCTTAAAC 2526 |||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||| Sbjct 2381 TTCGTATTTGTGCTTCTTGGCAAATAGTGATGGTTTCAATATAAATTTCTTGTCTTAAAC 2440 Query 2527 TCACATT 2533 ||||||| Sbjct 2441 TCACATT 2447 > Ahg483095 jgi|Araly1|483095|fgenesh2_kg.4__2155__AT2G40400.1 Length=2415 Score = 1986 bits (1075), Expect = 0.0 Identities = 1676/1962 (85%), Gaps = 58/1962 (3%) Strand=Plus/Plus Query 433 CGGAATCAGCAGctcctcctcctcctcctGC-G-ACCACAACACCGTCGCCGCCTCC-AC 489 ||||||||| ||||| ||||||||||||| | | | | ||| | | || ||||| | Sbjct 305 CGGAATCAGTAGCTCTTCCTCCTCCTCCTCCTGTTGC-CGTCACTG-CTCCACCTCCGCC 362 Query 490 -CC-GTGAATAAGGAAGAGACGATAACCTCGAGAATCTATGACGCGAC-G-GCCATTGGT 545 || ||| | ||||||||| |||||| || ||||||||||||||| | | | | ||||| Sbjct 363 GCCTGTGGAGAAGGAAGAGTTGATAACTTCTAGAATCTATGACGCGTCTGTG-C-TTGGT 420 Query 546 GAGCCGATGGCT-ATGGGAAAAGATAAGAAGAAG-GTGTGGGAGAAGCTGTTGAACGCGA 603 |||||||||||| |||| |||||||||||| || || ||||||||| ||||||| |||| Sbjct 421 GAGCCGATGGCTGTTGGG-AAAGATAAGAAG-AGAGTTTGGGAGAAGTTGTTGAATGCGA 478 Query 604 -GAGTTGTGTACCTCGGTGAGGCGGAGCAAGTGCCTACCAA-AGACGACAAAGAGCTTGA 661 || ||||||| ||||| || || || |||||||||| ||| ||||||||| | ||||| Sbjct 479 GGA-TTGTGTATCTCGGAGAAGCAGAACAAGTGCCTA-CAAGAGACGACAAGGTTCTTGA 536 Query 662 ACTCGAAATCGTTAGAAACCTGAGGAAGAGATGCGTTGAGAGCGAGCGTCAAATCTCTGT 721 ||||||||||| || || |||||||| |||| | |||||||| ||||| | ||| | Sbjct 537 GCTCGAAATCGTGAGGAATTTGAGGAAGCGATGTATCGAGAGCGATCGTCAGTTATCTTT 596 Query 722 AGCACTGGAAGCATTCCCTCTCGATTTGCAGGATCAGCTT-AATCAATACATGGATAAGA 780 |||| |||||||||| ||||| ||||||||||| ||| || || |||||||||||||||| Sbjct 597 AGCATTGGAAGCATTTCCTCTTGATTTGCAGGAACAG-TTAAACCAATACATGGATAAGA 655 Query 781 GGATGGACGGAGAGACATTGAAGTCTTATGTGACACATTGGCCTGCTCAACGTTGGCAAG 840 ||||||| | |||| |||||||| |||||| |||||||||| | |||||||||||||| Sbjct 656 GGATGGATGCAGAGGTTTTGAAGTCGTATGTGTCACATTGGCCAGTTCAACGTTGGCAAG 715 Query 841 AATATGAGCCTCTTTTAAGTTATTGCCGCGATAACTCTGTTAGACTAATTGCTTGTGGCA 900 | ||||||||||| |||||||| || ||| | ||| | |||| ||| |||||||| |||| Sbjct 716 AGTATGAGCCTCTGTTAAGTTACTGTCGCCAAAACGCAGTTAAACTCATTGCTTGCGGCA 775 Query 901 CTCCTCTCAAGGTTTTAAGAACTGTCCAAGCAGAAGGTATCCGTGGTCTTTCAAAATCTG 960 |||| |||||||||||||||||||||||||| || ||||||||||| || ||| | |||| Sbjct 776 CTCCGCTCAAGGTTTTAAGAACTGTCCAAGCTGAGGGTATCCGTGGCCTATCAGATTCTG 835 Query 961 AGCGTAAATTATACACTCCCCCTGCTGGTTCTGGGTTTATCTCAGGATTTTCTTCATTCT 1020 ||||||||||||||||||| ||||| ||||| |||||||||||||| ||| |||| |||| Sbjct 836 AGCGTAAATTATACACTCCTCCTGCGGGTTCAGGGTTTATCTCAGGGTTTACTTCCTTCT 895 Query 1021 CACGTAGATCTACATTCGATATGAGTCTCCC-AACACAGATTGTTCCTTTTGGACCGAGT 1079 ||||||| ||| || || |||||| || ||| |||||||||||||| |||||||||||| Sbjct 896 CACGTAGTTCTTCACTCAATATGAATC-CCCTCACACAGATTGTTCCATTTGGACCGAGT 954 Query 1080 TCATATTTGTCGGCACAAGCAAGAGTTGTTGAAGACCATACAATGTCACAAGTTATTTTA 1139 || ||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||| Sbjct 955 TCTTATTTGTCGGCGCAAGCTAGAGTTGTTGAAGACCATACTATGTCACAAGTTATTTTA 1014 Query 1140 CAAGCAGTAGCAGATGGAGGGGGTACTGGTCTACTGTTAGTGGTGACAGGGGCAAGTCAT 1199 |||||||| ||||||||||| || |||||||| || ||||||||||||||||||| ||| Sbjct 1015 CAAGCAGTTGCAGATGGAGGTGGAACTGGTCTGCTTTTAGTGGTGACAGGGGCAAACCAT 1074 Query 1200 GTTGAGTATGGTTCAAGAGGAACAGGTTTGCCAGCAAGGATCTCAAGGAAGTTTCCAAAG 1259 ||||||||||| |||||||||||||| ||||| ||||||||||| ||||| |||| ||| Sbjct 1075 GTTGAGTATGGGTCAAGAGGAACAGGCTTGCCTGCAAGGATCTCTAGGAAAATTCCCAAG 1134 Query 1260 AAAAACCAAGTTGTTGTATTACTTGACCCTGAAAGACAGTTCTTGC-GAAGAGAGGGCGA 1318 |||| ||| |||||||||||||||| |||||||| |||||||||| ||| |||||| || Sbjct 1135 AAAAGTCAACTTGTTGTATTACTTGATCCTGAAAGGCAGTTCTTGCGGAA-AGAGGGTGA 1193 Query 1319 AACTCCAGTTGCTGATTTCTTGTGGTATTCTGCT-GCAAGACCCTGCAGTAGAAACTGCT 1377 | |||||||||||||||||||||||||||||| | || ||||||||||| |||||||||| Sbjct 1194 ATCTCCAGTTGCTGATTTCTTGTGGTATTCTG-TGGCCAGACCCTGCAGCAGAAACTGCT 1252 Query 1378 TTGACCGAGCAGAGATTGCTCGAGTAATGAATGCAGCTGGCAGGAGGCGAGATGCCCTTC 1437 ||||||||||||| || ||||| ||||||||||||||||| ||||| ||||||||||||| Sbjct 1253 TTGACCGAGCAGAAATCGCTCGTGTAATGAATGCAGCTGGTAGGAGACGAGATGCCCTTC 1312 Query 1438 CTCC-CGATATTCAAAATGGATTAGACCTTGGTCTGGTGTCACCTGAGGTTCTGCAGAAT 1496 | || || |||||||| |||||||||||||||||||||||||||||| ||||||||||| Sbjct 1313 C-CCAAGACATTCAAAAAGGATTAGACCTTGGTCTGGTGTCACCTGAGATTCTGCAGAAT 1371 Query 1497 CTCTTTGATTTGGAGCAGTATCCTCTTATTTCTGAGCTTACTCAGCGGTTTCAGGGTTTC 1556 |||||||||||||||| |||||||||||||| ||| |||| | ||||| ||||||||| Sbjct 1372 TTCTTTGATTTGGAGCAATATCCTCTTATTTCAGAGTTTACAAAACGGTTCCAGGGTTTC 1431 Query 1557 CGAGAAAGGTTGTTGGCAGATCCAAAATTCCTGAATAGGTTAGCCATCGAAGAAGCTATA 1616 |||||||||||||||||||| || |||||| ||||||| ||||| || |||||||||||| Sbjct 1432 CGAGAAAGGTTGTTGGCAGACCCCAAATTCTTGAATAGATTAGCTATTGAAGAAGCTATA 1491 Query 1617 TCAATAACAACTACACTAATAGCACAATATGAGAAGCGAAAAGAGAATTTCTTTGAAGAA 1676 || |||||||| ||||| |||| |||||||||||||| ||||| || |||||||||||| Sbjct 1492 TCGATAACAACGACACTTGTAGCTCAATATGAGAAGCGGAAAGAAAACTTCTTTGAAGAA 1551 Query 1677 ATTGACTATGTTATAACTGATA-CAGTGAGAGGATCAGTCGTTGATTTTTTCACAGTTTG 1735 | ||||||||||| ||||||| | || |||| |||||| |||||||||||||||||||| Sbjct 1552 CTCGACTATGTTATTACTGATAGC-GTAAGAGCATCAGTTGTTGATTTTTTCACAGTTTG 1610 Query 1736 GCTTCCTGCACCAACTTTGTCTTTTCTTTCATATGCTGATGAGACCACTGGACCAGACAG 1795 ||| ||||||||||| ||||||||| | ||||| ||||||||||| | ||||||| |||| Sbjct 1611 GCTGCCTGCACCAACCTTGTCTTTTATCTCATACGCTGATGAGACAATTGGACCAAACAG 1670 Query 1796 CATAGACGCCCTGAGAGGCCTCCTAGGATCCATACCTGATAACGCATTTCAAAAAAGTCT 1855 |||||| ||||| | || ||||||||||||||||||||| || ||||||||||||||||| Sbjct 1671 CATAGATGCCCTAAAAGACCTCCTAGGATCCATACCTGACAATGCATTTCAAAAAAGTCT 1730 Query 1856 TGCTGGA-AGAGAGTGGAAC-CTGAATCTTAGAATTGCTTCAGTTATTGTTGGTGGCTTG 1913 || |||| | ||||||| || ||||||||||| ||||||||||||||||| ||||||||| Sbjct 1731 TGGTGGACA-AGAGTGG-ACTCTGAATCTTAGGATTGCTTCAGTTATTGTCGGTGGCTTG 1788 Query 1914 AAGCTTGCTGGTGTTGGAGTTGTTTCCAGTTTTGCAGCTGTGGGAGCTTCAAATGCATTG 1973 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| Sbjct 1789 AAGCTTGCTGGTGTTGGAGTTGTTTCCAGTTTTGCAGCTGTGGGATCTTCAAATGCTTTG 1848 Query 1974 AATATAGCACGAAAGGTCATTAAACCCGAGCTGGTTGT-GGCTGAGAAACCTAAGAGGTC 2032 || | |||||| |||||||||| ||| ||| ||| || |||| || | |||||||| Sbjct 1849 TATGCAATACGAAAATTCATTAAACCAGAGTTGGGTGTTGG-TGAGCAAGCAAAGAGGTC 1907 Query 2033 TCCTCTTCTGAAGACGGCAATGGTTTACGGAGGTTTTCTGGGAACATCTGCAAATCTTCG 2092 |||| | ||||||||||| | || || ||||||| ||||||||||||| ||||| | || Sbjct 1908 TCCTATGCTGAAGACGGCCCTTGTGTATGGAGGTTATCTGGGAACATCTTCAAATATCCG 1967 Query 2093 TTACCAGATAATTGC-GGGATTAATAGAGCATCGCCTATCTGATGAGCTTTCTTCGCAAC 2151 ||| |||||||| || ||| ||||||||||||||| | ||||| ||||||||||| |||| Sbjct 1968 TTATCAGATAATCGCTGGG-TTAATAGAGCATCGCATTTCTGACGAGCTTTCTTCTCAAC 2026 Query 2152 CTCTACTTGTAAA--TGCTATTTCATTTGTTGT-C-AGGACCCTAAACTCATA-TTTCGG 2206 ||||||||||||| || |||||||||||||| | || | | ||| ||| || ||| || Sbjct 2027 CTCTACTTGTAAACATG--ATTTCATTTGTTGTTCGAGTAGC-TAA-CTCCTACTTT-GG 2081 Query 2207 AACGCAGCAATGGATCGATCTTGCACGCTCTACGGGTCTGCAAACTCAGAAAAGCATCCC 2266 ||| ||||||||||| |||||||| ||||||||||||||||| ||||||||||| || | Sbjct 2082 AACTCAGCAATGGATTGATCTTGCGCGCTCTACGGGTCTGCAGACTCAGAAAAGTGTCGC 2141 Query 2267 AGCCTCTAAAGAAATTTCAGAGGCTTTGGAAG--AACCGACAGTGGAATGC-GATACTAC 2323 | | || || |||| | |||| || ||| | || | |||||||||| | | ||| | Sbjct 2142 AACTTCCAACCAAATCCCCGAGG-TTGGGA-GCCAATCTACAGTGGAATACAG-TAC-A- 2196 Query 2324 TACTGAAGAGGAAAGTATCGATAAGCTCAATAATCAATGATA 2365 |||||||||| |||||||||| | ||||| ||||||||||| Sbjct 2197 -ACTGAAGAGGCAAGTATCGATGATCTCAAGAATCAATGATA 2237 > Ahg922126 jgi|Araly1|922126|scaffold_103407.1 Length=259 Score = 316 bits (171), Expect = 4e-85 Identities = 187/195 (96%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 588 AAGCTGTTGAACGCGAGAGTTGTGTACCTCGGTGAGGCGGAGCAAGTGCCTACCAAAGAC 647 |||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 15 AAGCTGATGAATGCGAGAGCTGTGTACCTCGGTGAGGCGGAGCAAGTGCCTACCAAAGAC 74 Query 648 GACAAAGAGCTTGAACTCGAAATCGTTAGAAACCTGAGGAAGAGATGCGTTGAGAGCGAG 707 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct 75 GACAAAGAGCTTGAACTCGAAATCGTTAGAAACTTGAGGAAGAGATGCGTTGAGAGCCAG 134 Query 708 CGTCAAATCTCTGTAGCACTGGAAGCATTCCCTCTCGATTTGCAGGATCAGCTTAATCAA 767 |||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct 135 CGTCAAATATCTGTAGCACTGGAAGCATTCCCTCTCGATTTTCAGGACCAGCTTAATCAA 194 Query 768 TACATGGATAAGAGG 782 ||||||||||||||| Sbjct 195 TACATGGATAAGAGG 209 > Ahg932172 jgi|Araly1|932172|scaffold_400160.1 Length=259 Score = 305 bits (165), Expect = 8e-82 Identities = 186/196 (95%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 588 AAGCTGTTGAACGCGAGAGTTGTGTACCTCGGTGAGGCGGAGCAAGTGCCTACCAAAGAC 647 |||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 15 AAGCTGATGAATGCGAGAGCTGTGTACCTCGGTGAGGCGGAGCAAGTGCCTACCAAAGAC 74 Query 648 GACAAAGAGCTTGAACTCGAAATCGTTAGAAACCTGAGGAAGAGATGCGTTGAGAGCGAG 707 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct 75 GACAAAGAGCTTGAACTCGAAATCGTTAGAAACTTGAGGAAGAGATGCGTTGAGAGCCAG 134 Query 708 CGTCAAATCTCTGTAGCACTGGAAGCATTCCCTCTCGA-TTTGCAGGATCAGCTTAATCA 766 |||||||| ||||||||| ||||||||||||||||||| ||| ||||| ||||||||||| Sbjct 135 CGTCAAATATCTGTAGCAGTGGAAGCATTCCCTCTCGAATTT-CAGGACCAGCTTAATCA 193 Query 767 ATACATGGATAAGAGG 782 |||||||||||||||| Sbjct 194 ATACATGGATAAGAGG 209 > Ahg942583 jgi|Araly1|942583|scaffold_603127.1 Length=203 Score = 268 bits (145), Expect = 1e-70 Identities = 161/169 (95%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 581 GTGGGAGAAGCTGTTGAACGCGAGAGTTGTGTACCTCGGTGAGGCGGAGCAAGTGCCTAC 640 ||||||||||||| |||| || |||| |||||||||||||||||||| |||||||||||| Sbjct 8 GTGGGAGAAGCTGATGAATGCCAGAGCTGTGTACCTCGGTGAGGCGGGGCAAGTGCCTAC 67 Query 641 CAAAGACGACAAAGAGCTTGAACTCGAAATCGTTAGAAACCTGAGGAAGAGATGCGTTGA 700 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 68 CAAAGACGACAAAGAGCTTGAACTCGAAATCGTTAGAAACTTGAGGAAGAGATGCGTTGA 127 Query 701 GAGCGAGCGTCAAATCTCTGTAGCACTGGAAGCATTCCCTCTCGATTTG 749 ||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct 128 GAGCGAGCGTCAAATATCTGTAGCACTGGAAGCATTCCCTTTCGATTTG 176 > Ahg914969 jgi|Araly1|914969|Al_scaffold_0001_5223 Length=369 Score = 134 bits (72), Expect = 4e-30 Identities = 111/128 (87%), Gaps = 9/128 (7%) Strand=Plus/Plus Query 1684 ATGTTATAACTGATACAGTGAGAGGATCAGTCGTTGATTTTTTCACAGTTTGGCTTCCTG 1743 ||| |||||||||||||| |||||||||||| ||| | ||||| ||||||||||||||| Sbjct 191 ATGCTATAACTGATACAGCGAGAGGATCAGTTGTT--TATTTTCCCAGTTTGGCTTCCTG 248 Query 1744 CACCAACT-T-TGTCTTT-TCTTTCATATGCTGATGAGACCACTGGACCAGACAGCATAG 1800 |||||||| | ||||| | |||| | | | ||||||||||||||||||||||||||||| Sbjct 249 CACCAACTCTCTGTCTCTGTCTT-C-TCT--TGATGAGACCACTGGACCAGACAGCATAG 304 Query 1801 ACGCCCTG 1808 || ||||| Sbjct 305 ACACCCTG 312 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 96711132055 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5