BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G57330.1 Length=3277 Score E Sequences producing significant alignments: (Bits) Value Ahg486176 jgi|Araly1|486176|fgenesh2_kg.5__2168__AT3G57330.1 5214 0.0 Ahg483236 jgi|Araly1|483236|fgenesh2_kg.4__2296__AT2G41560.1 3166 0.0 Ahg490855 jgi|Araly1|490855|fgenesh2_kg.7__288__AT4G37640.1 259 9e-68 > Ahg486176 jgi|Araly1|486176|fgenesh2_kg.5__2168__AT3G57330.1 Length=3263 Score = 5214 bits (2823), Expect = 0.0 Identities = 3093/3224 (96%), Gaps = 16/3224 (0%) Strand=Plus/Plus Query 1 ATGTCTAATCTACTAAAGGATTTCGAGGTCGCATCTAAGAATCCGTCGCTGGAAGCTCGT 60 ||||||||||| || |||||||||||||||| | |||||||||||||||| ||||||||| Sbjct 1 ATGTCTAATCTCCTTAAGGATTTCGAGGTCGAAGCTAAGAATCCGTCGCTCGAAGCTCGT 60 Query 61 CAACGATGGCGATCCTCCGTGGGACTCGTAAAAAATCGGGCTCGTCGTTTCCGTATGATC 120 ||||||||||| |||||||| |||||||| ||||||||||||||||| |||||||||||| Sbjct 61 CAACGATGGCGGTCCTCCGTCGGACTCGTCAAAAATCGGGCTCGTCGATTCCGTATGATC 120 Query 121 AGTAATCTCGACAAACTCGCTGAGAATGAGAAGAAGAGATGCCAGATCCAGGAAAAGATA 180 || |||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||| Sbjct 121 AGCAATCTCGAGAAACTCGCTGAGAATGACAAGAAGAGATGCGAGATCCAGGAAAAGATA 180 Query 181 AGGGTTGTC-TTCTATGTTCAAAAGGCAGCTTTTCAGTTTATTGATGCTGGTGCCCGCCC 239 |||||| | ||||||||||||||||||||| ||||||| ||||||||||| ||||| | Sbjct 181 CGGGTTG-CTTTCTATGTTCAAAAGGCAGCTCTTCAGTTCATTGATGCTGGCGCCCGTCG 239 Query 240 TGAATATAAACTCACTGATGAGGTCAAAAAAGCAGGATTTTATGTCGAAGCAGATGAGCT 299 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 240 TGAATATAAACTCACTGATGAGGTCAAACAAGCAGGATTTTATGTCGAAGCAGATGAGCT 299 Query 300 TGCTTCTATGGTTCGCAATCATGACACAAAGAGCCTTACAAAAATCGGAGGACCTGAAGG 359 ||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||| Sbjct 300 TGCTTCTATGGTTCGCAATCATGACACAAAGAGCCTTACCAAGAGCGGAGGACCTGAAGG 359 Query 360 AATCGCTCAGAAAGTATCTGTATCTCTCGCTGAAGGTGTACGTTCGAGTGAACTACACAT 419 ||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct 360 AATTGCTCAGAAAGTGTCTGTATCTCTCGCTGAAGGTGTCCGTTCGAGTGAACTACACAT 419 Query 420 CAGAGAAAAAATCTATGGAGAAAACCGTTATACTGAGAAACCAGCCAGATCATTTTTAAC 479 |||||| |||||||||||||||||||||||| |||||||||| |||||||| |||||||| Sbjct 420 CAGAGAGAAAATCTATGGAGAAAACCGTTATCCTGAGAAACCTGCCAGATCGTTTTTAAC 479 Query 480 GTTTGTTTGGGAAGCGCTTCAAGACATTACCCTTATCATCCTTATGGTCTGCGCTGTAGT 539 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 480 GTTTGTTTGGGAAGCGCTTCAAGACATAACCCTTATCATCCTTATGGTCTGCGCTGTAGT 539 Query 540 ATCAATAGGAGTGGGAGTTGCAACAGAAGGTTTTCCAAAGGGCATGTATGATGGGACGGG 599 ||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct 540 ATCGATAGGAGTGGGAGTTGCCACAGAAGGATTTCCAAAGGGCATGTATGATGGGACGGG 599 Query 600 GATCTTGCTTAGTATAATCTTGGTGGTCATGGTTACTGCTATCAGTGACTACAAGCAATC 659 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 600 GATCTTGCTTAGTATAATCTTGGTGGTTATGGTTACTGCTATCAGTGACTACAAGCAATC 659 Query 660 TTTGCAGTTCAGAGATTTGGATCGAGAGAAAAAGAAGATTATTATTCAAGTCACCAGGGA 719 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 660 TTTGCAGTTCAGAGATTTGGATCGAGAGAAAAAGAAGATTATTATTCAAGTCACCAGGGA 719 Query 720 TGGCAGCAGACAAGAGGTCTCCATCCATGACTTGGTTGTTGGAGATGTGGTCCATTTATC 779 ||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||| Sbjct 720 TGGGAGCAGACAAGAGATCTCCATCCATGACTTGGTTGTTGGAGATGTGGTTCATTTATC 779 Query 780 TATTGGGGATCAAGTTCCAGCTGATGGGATTTTTATATCCGGATACAATCTGGAGATAGA 839 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 780 TATTGGGGATCAAGTTCCAGCTGATGGGATTTTTATATCCGGATACAATCTGGAGATAGA 839 Query 840 CGAGTCAAGCTTATCGGGCGAGAGTGAACCATCACATGTGAATAAAGAGAAGCCGTTTCT 899 ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 840 CGAATCAAGCTTATCGGGCGAGAGTGAACCATCACATGTGAATAAAGAGAACCCGTTTCT 899 Query 900 GCTTTCAGGAACCAAAGTCCAAAACGGCTCTGCAAAAATGCTGGTGACAACCGTTGGTAT 959 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 900 GCTTTCAGGAACCAAAGTCCAAAACGGCTCTGCAAAAATGCTGGTTACAACCGTTGGTAT 959 Query 960 GAGGACTGAGTGGGGAAAGTTGATGGATACTCTGAGTGAGGGTGGAGAGGATGAGACCCC 1019 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 960 GAGGACTGAGTGGGGAAAGTTGATGGATACTCTGTGTGAGGGTGGAGAGGATGAGACCCC 1019 Query 1020 TCTGCAGGTGAAACTAAATGGTGTTGCAACAATCATAGGTAAGATTGGTTTAGGCTTTGC 1079 |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct 1020 TCTGCAGGTGAAACTAAACGGTGTTGCAACAATCATAGGTAAGATTGGTTTAGTATTTGC 1079 Query 1080 AGTG-CTTACGTTTGTGGTGTTGTGCATAAGGTTCGTTGTGGAGAAAGCCACGGCTGGTA 1138 |||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1080 AGTGAC-TACGTTTTTGGTGTTGTGCATAAGGTTCGTTGTGGAGAAAGCCACGGCTGGTA 1138 Query 1139 GCATCACTGAGTGGTCTTCTGAAGATGCACTAACATTGCTTGACTACTTTGCAATTGCTG 1198 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1139 GCATCACTGAGTGGTCTTCTGAAGATGCACTAACATTTCTTGACTACTTTGCAATTGCTG 1198 Query 1199 TTACCATTATAGTCGTTGCTGTACCTGAAGGGTTACCTTTGGCTGTGACCTTAAGTCTAG 1258 ||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct 1199 TTACCATTATAGTTGTTGCTGTACCTGAAGGATTACCTTTGGCTGTGACCTTGAGTCTAG 1258 Query 1259 CATTTGCTATGAAGCAA-TTAATGAGTGATAGGGCACTTGTAAGGCATCTGGCTGCATGT 1317 |||||||||||||| || ||||||||||| ||||||||||| |||||| ||||||||||| Sbjct 1259 CATTTGCTATGAAG-AAGTTAATGAGTGACAGGGCACTTGTGAGGCATTTGGCTGCATGT 1317 Query 1318 GAGACGATGGGTTCTTCTACCTGCATCTGCACGGATAAAACAGGGACCTTAACCACTAAC 1377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1318 GAGACGATGGGTTCTTCTACCTGCATCTGCACGGATAAAACAGGGACCTTAACCACTAAC 1377 Query 1378 CACATGGTAGTCAACAAAGTTTGGATATGTGAAAATATCAAAGAGAGGCAAGAGGAAAAC 1437 ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct 1378 CACATGGTAGTCAACAAAGTTTGGATATGTGAAAATATCAAGGAGAGGCAAGAAGAAAAC 1437 Query 1438 TTCCAGTTGAACCTATCCGAACAAGTTAAGAATATCCTTATACAGGCCATATTTCAGAAC 1497 ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| Sbjct 1438 TTCCAGTTGAACCTATCTGAACTAGTTAAGAATATCCTTATACAGGCCATATTTCAGAAC 1497 Query 1498 ACTGGTTCTGAAGTTGTTAAGGATAAGGAAGGAAAAACTCAGATCCTGGGTTCACCTACA 1557 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1498 ACTGGTTCTGAAGTCGTTAAGGATAAGGAAGGAAAAACTCAGATCCTGGGTTCACCTACA 1557 Query 1558 GAAAGGGCGATACTGGAATTTGGTTTGCTTTTGGGTGGTGACGTTGACACGCAACGCCGA 1617 |||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct 1558 GAAAGGGCTATACTGGAATTTGGTTTGCTTTTAGGTGGTGACGTTGACACACAACGCCGA 1617 Query 1618 GAACATAAGATACTCAAGATCGAGCCATTCAACTCAGACAAGAAGAAAATGTCTGTTCTT 1677 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1618 GAACATAAGATACTCAAGATAGAGCCATTCAACTCAGACAAGAAGAAAATGTCTGTTCTT 1677 Query 1678 ACATCTCATTCAGGTGGTAAAGTACGTGCTTTCTGCAAAGGTGCATCTGAAATAGTCTTG 1737 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1678 ACATCTCATTCTGGTGGTAAAGTACGTGCTTTCTGCAAAGGTGCATCTGAAATAGTCTTG 1737 Query 1738 AAAATGTGTGAGAAGGTTGTGGATTCAAACGGAGAATCTGTTCCTTTATCTGAAGAAAAG 1797 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1738 AAAATGTGCGAGAAGGTTGTGGATTCAAACGGAGAATCTGTTCCTTTATCTGAAGAAAAG 1797 Query 1798 ATTGCAAGTATCTCTGATGTCATAGAGGGATTTGCTTCAGAGGCTCTTAGGACTCTCTGC 1857 ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct 1798 ATTGCAAGTATCTCTGATGTCATAGAGGGATTTGCTTCAGAGGCTCTGAGAACTCTCTGC 1857 Query 1858 TTAGTTTACACGGATCTTGATGAAGCTCCCAGA-GGGGATCTTCCTAATGGTGGCTACAC 1916 ||||||||||||||||||||||||||||||| | ||| |||||||| ||||||||||||| Sbjct 1858 TTAGTTTACACGGATCTTGATGAAGCTCCCA-ATGGGAATCTTCCTGATGGTGGCTACAC 1916 Query 1917 ATTGGTAGCAGTTGTTGGAATCAAGGACCCGGTTCGGCCTGGTGTTAGGGAAGCCGTTCA 1976 |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1917 ATTGGTTGCAGTTGTTGGAATCAAGGACCCGGTTCGCCCTGGTGTTAGGGAAGCCGTTCA 1976 Query 1977 GACTTGTCAAGCTGCTGGAATCACTGTTCGTATGGTCACTGGTGATAACATTAGCACTGC 2036 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1977 GACTTGTCAAGCTGCTGGAATCACTGTTCGTATGGTCACTGGTGATAACATAAGCACTGC 2036 Query 2037 CAAAGCGATTGCAAAGGAATGTGGTATACTTACAGCAGGAGGTGTAGCTATAGAAGGTTC 2096 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2037 CAAAGCGATTGCAAAGGAATGTGGTATACTTACAGCAGGAGGTGTAGCTATAGAAGGTTC 2096 Query 2097 AGACTTCCGTAATTTGCCTCCACATGAAATGAGGGCCATTCTACCGAAAATCCAGGTGAT 2156 ||| ||||| |||||||||||||||||||||||||||||| |||| ||||| |||||||| Sbjct 2097 AGAGTTCCGCAATTTGCCTCCACATGAAATGAGGGCCATTTTACCCAAAATTCAGGTGAT 2156 Query 2157 GGCTCGGTCTTTGCCATTGGACAAACATACATTAGTCAACAACTTGAGGAAAATGGGAGA 2216 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2157 GGCTCGGTCTTTGCCATTGGACAAACATACATTAGTCAACAACTTGAGGAAAATGGGAGA 2216 Query 2217 GGTAGTTGCAGTGACTGGGGATGGAACAAATGATGCTCCTGCATTGCATGAGGCTGACAT 2276 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 2217 GGTAGTTGCAGTGACCGGGGATGGAACAAATGATGCTCCTGCATTGCATGAGGCTGACAT 2276 Query 2277 TGGACTTGCCATGGGAATAGCTGGAACAGAGGTTGCGAAAGAGAATGCTGATGTTATCAT 2336 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 2277 TGGACTTGCCATGGGAATAGCTGGAACAGAGGTTGCGAAAGAGAATGCTGATGTAATCAT 2336 Query 2337 AATGGACGACAACTTTGCAACAATAGTGAATGTGGCAAAATGGGGACGTGCTGTGTATAT 2396 |||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct 2337 AATGGATGACAACTTTGCAACAATAGTGAATGTGGCGAGATGGGGACGTGCTGTGTATAT 2396 Query 2397 CAACATCCAGAAGTTTGTTCAGTTCCAGCTAACTGTTAATGTTGTTGCTCTGATCATCAA 2456 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 2397 TAACATCCAGAAGTTTGTTCAGTTCCAGCTAACTGTTAATGTTGTTGCTTTGATCATCAA 2456 Query 2457 CTTTGTCTCTGCTTGCATCACTGGATCTGCGCCACTCACCGCAGTGCAACTGCTTTGGGT 2516 ||||||||||||||||||||| ||| ||||||||||||| ||||||||||| |||||||| Sbjct 2457 CTTTGTCTCTGCTTGCATCACCGGAGCTGCGCCACTCACTGCAGTGCAACTACTTTGGGT 2516 Query 2517 GAACATGATCATGGACACACTTGGTGCATTGGCTCTAGCGACCGAACCTCCCAACGAAGG 2576 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct 2517 GAACATGATCATGGACACACTCGGTGCATTGGCTCTAGCAACCGAACCTCCCAACGAAGG 2576 Query 2577 TTTAATGAAACGCCAACCAATCGGTAGAACAGCAAGCTTCATCACCAGAGCTATGTGGAG 2636 |||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||| Sbjct 2577 TTTAATGAAACGTCAACCAATCGCTAGAACCGCAAGCTTCATCACCAGAGCTATGTGGAG 2636 Query 2637 AAACATCATTGGTCAAAGCATTTATCAGTTAATCGTTCTCGGCATCCTCAACTTTGCTGG 2696 |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct 2637 AAACATCATTGGTCAAAGCATTTATCAGTTAATCGTCCTTGGCATCCTCAACTTTGCTGG 2696 Query 2697 CAAACAAATACTCAACCTTAATGGCCCAGATTCAACAATTGTTCTCAACACAATTATCTT 2756 |||||||||||||||||| || ||||||||||||||| ||||||||| || || ||||| Sbjct 2697 CAAACAAATACTCAACCTCAACGGCCCAGATTCAACAGCTGTTCTCAATACCATCATCTT 2756 Query 2757 CAACTCTTTCGTCTTTTGCCAGGTGTTTAATGAAGTAAACAGCAGAGAGATAGAGAAGAT 2816 |||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct 2757 CAACTCCTTCGTCTTTTGTCAGGTGTTTAATGAAGTAAACAGCCGAGAGATAGAGAAGAT 2816 Query 2817 AAATGTGTTCGAAGGAATGTTCAAGAGTTGGGTGTTTGTTGCTGTAATGACTGCAACAGT 2876 ||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 2817 AAACGTGTTCAAAGGAATGTTCAAGAGTTGGGTGTTTGTTTCTGTAATGACTGCAACAGT 2876 Query 2877 TGGATTCCAAGTGATCATTGTTGAGTTCCTTGGAGCATTTGCAAGCACTGTTCCTTTGAG 2936 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2877 TGGATTCCAAGTGATCATTGTTGAGTTCCTTGGAGCATTTGCAAGCACTGTTCCTTTGAG 2936 Query 2937 CTGGCAACATTGGCTACTCTGCATTTTGATTGGTTCCGTAAGCATGATTCTAGCCGTTGG 2996 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 2937 CTGGCAACATTGGCTGCTCTGCATTTTGATTGGTTCCGTAAGCATGATTCTAGCCGTTGG 2996 Query 2997 TCTTAAATGCATACCGGTTGAGTCTAACCGTCATCACGATGGCTATGAGCTGCTTCCTTC 3056 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2997 TCTTAAATGCATACCGGTTGAGTCTAACCGTCATCACGATGGCTATGAGCTGCTTCCTTC 3056 Query 3057 TGGTCCATCTGACTCTGCCTAACCCA-CCATCTAGTAA-CGCAACGTCCATTTTATATTT 3114 |||||||||||||||||||||||| | || |||||||| ||| ||||||||||||||||| Sbjct 3057 TGGTCCATCTGACTCTGCCTAACC-ATCCTTCTAGTAATCGCTACGTCCATTTTATATTT 3115 Query 3115 GAttttttttCCTT-----CCTTCTTCAACTCCGGGCTAATGATCTGATCTCAAATTGTA 3169 |||||||||| || |||| |||||||||||||||||||| ||||||||| ||||| Sbjct 3116 GATTTTTTTTTTTTTTGTTCCTTTTTCAACTCCGGGCTAATGATATGATCTCAATTTGTA 3175 Query 3170 TAAAATCGTTGCTGGATTTTTTCTATTTTGGGTGTGGGTTTGAT 3213 |||||||||||||||||||||||||||||||||||||||||||| Sbjct 3176 TAAAATCGTTGCTGGATTTTTTCTATTTTGGGTGTGGGTTTGAT 3219 > Ahg483236 jgi|Araly1|483236|fgenesh2_kg.4__2296__AT2G41560.1 Length=3201 Score = 3166 bits (1714), Expect = 0.0 Identities = 2652/3104 (85%), Gaps = 67/3104 (2%) Strand=Plus/Plus Query 1 ATGTCTAATCTACTAAAGGATTTCGAGGTCGCA-TCTAAGAATCCGTCGCTGGAAGCTCG 59 ||||| ||| | |||| ||| |||||||||| | |||||||||||||||||||||| || Sbjct 77 ATGTCGAATTTGCTAAGGGACTTCGAGGTCG-AGGCTAAGAATCCGTCGCTGGAAGCGCG 135 Query 60 TCAACGATGGCGATCCTCCGT-GGGACTCGTAAAAAATCGGGCTCGTCGTTTCCGTATGA 118 |||||||||| | || ||||| | | || || || || ||||||||||||||| | Sbjct 136 TCAACGATGGAGGTCGTCCGTCTCTA-TAGTGAAGAACCGTACTCGTCGTTTCCGTAACA 194 Query 119 -TCAGTAATCTCGACAAACTCGCTGAGAATGAGAAGAAG-AGATGCCAGATCCAGGAAAA 176 || | ||||||| || |||||||| | |||| ||| || ||||||||||||||| Sbjct 195 TTC-GGGATCTCGATAAGCTCGCTGACTACGAGACCAAGAAG-CACCAGATCCAGGAAAA 252 Query 177 GATAAGGGTTGTC-TTCTATGTTCAAAAGGCAGCTTTTCAGTTTATTGATGCTGGTGCCC 235 ||| | |||| | ||||||||||||||||||||| |||| || |||||||||| ||| Sbjct 253 GATCCGAGTTG-CTTTCTATGTTCAAAAGGCAGCTCTTCAATTCATTGATGCTGCTGCTA 311 Query 236 GCCCTGAATATAAACTCACTGATGAGGTCAAAAAAGCAGGATTTTATGTCGAAGCAGATG 295 | || ||||| || |||| ||||||||| || |||| ||||||| | | |||||||||| Sbjct 312 GGCCGGAATACAAGCTCAGTGATGAGGTTAAGCAAGCTGGATTTTCTATTGAAGCAGATG 371 Query 296 AGCTTGCTTCTATGGTTCGCAATCATGACACAAAGAGCCT--TACAAAAATCGGAGGACC 353 | ||||| |||||||||||||| ||||||| |||||||| ||| ||| || ||| Sbjct 372 AACTTGCATCTATGGTTCGCAAAAATGACACTAAGAGCCTGGCACACAAA--GGTGGAGT 429 Query 354 TGAAGGAATCGCTCAGAAAGTATCTGTATCTCTCGCTGAAGGTGTACGTTCGAGTGAACT 413 ||||| ||| ||| ||||| ||||||||||||| | |||||| || |||||||||||| | Sbjct 430 TGAAGAAATTGCTAAGAAAATATCTGTATCTCTAGATGAAGGAGTTCGTTCGAGTGAAGT 489 Query 414 ACACATCAGAGAAAAAATCTATGGAGAAAACCGTTATACTGAGAAACCAGCCAGATCATT 473 | || ||| | ||| || | ||||||||| ||||| ||||||||||||||||||||||| Sbjct 490 GCCCACCAGGGCAAAGATATTTGGAGAAAATCGTTACACTGAGAAACCAGCCAGATCATT 549 Query 474 TTTAACGTTTGTTTGGGAAGCGCTTCAAGACATTACCCTTATCATCCTTATGGTCTGCGC 533 ||||| |||||| ||||||||||| || ||||| |||||||||||||||||||||||||| Sbjct 550 TTTAATGTTTGTGTGGGAAGCGCTCCACGACATAACCCTTATCATCCTTATGGTCTGCGC 609 Query 534 TGTAGTATCAATAGGAGTGGGAGTTGCAACAGAAGGTTTTCCAAAGGGCATGTATGATGG 593 ||||||||||||||| ||||| ||||| |||||||| ||||||||||| ||||||||||| Sbjct 610 TGTAGTATCAATAGGTGTGGGTGTTGCCACAGAAGGATTTCCAAAGGGAATGTATGATGG 669 Query 594 GACGGGGATCTTGCTTAGTATAATCTTGGTGGTCATGGTTACTGCTATCAGTGACTACAA 653 || ||||||||||| |||||| ||||||| |||||||||||||| |||||||||||||| Sbjct 670 AACAGGGATCTTGCTAAGTATACTCTTGGTAGTCATGGTTACTGCGATCAGTGACTACAA 729 Query 654 GCAATCTTTGCAGTTCAGAGATTTGGATCGAGAGAAAAAGAAGATTATTATTCAAGTCAC 713 ||||||||||||||||||||| |||||||||||||| |||||||||||| | || ||||| Sbjct 730 GCAATCTTTGCAGTTCAGAGACTTGGATCGAGAGAAGAAGAAGATTATTGTCCAGGTCAC 789 Query 714 CAGGGATGGCAGCAGACAAGAGGTCTCCATCCATGACTTGGTTGTTGGAGATGTGGTCCA 773 ||| ||||| | ||||||||| ||||||| ||||||||||| ||||||||||| || || Sbjct 790 CAGAGATGGGAACAGACAAGAAATCTCCATTCATGACTTGGTCGTTGGAGATGTAGTTCA 849 Query 774 TTTATCTATTGGGGATCAAGTTCCAGCTGATGGGATTTTTATATCCGGATACAATC-TGG 832 | ||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||| Sbjct 850 TCTATCTATTGGGGATCAAGTTCCAGCTGATGGGATTTTTATATCTGGATACAA-CTTGG 908 Query 833 AGATAGACGAGTCAAGCTTATCGGGCGAGAGTGAACCATCACATGTGAATAAAGAGAAGC 892 ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 909 AGATAGATGAGTCAAGCTTATCGGGCGAGAGTGAACCGTCACATGTGAATAAAGAGAAGC 968 Query 893 CGTTTCTGCTTTCAGGAACCAAAGTCCAAAACGGCTCTGCAAAAATGCTGGTGACAACCG 952 | ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| | Sbjct 969 CTTTTCTGCTTTCAGGAACCAAAGTACAAAACGGTTCTGCAAAAATGCTGGTGACAACAG 1028 Query 953 TTGGTATGAGGACTGAGTGGGGAAAGTTGATGGATACTCTGAG-TGAGGGTGGAGAGGAT 1011 |||||||||||||||||||||||||||||||||| || ||| | ||| |||||||| ||| Sbjct 1029 TTGGTATGAGGACTGAGTGGGGAAAGTTGATGGAAACGCTG-GTTGATGGTGGAGAAGAT 1087 Query 1012 GAGACCCCTCTGCAGGTGAAACTAAATGGTGTTGCAACAATCATAGGTAAGATTGGTTTA 1071 ||||| |||||||||||||| |||||||| ||||||||||| || ||||||||||||||| Sbjct 1088 GAGACTCCTCTGCAGGTGAAGCTAAATGGGGTTGCAACAATAATTGGTAAGATTGGTTTA 1147 Query 1072 GGCTTTGCAGTGCTTACGTTTGTGGTGTTGTGCATAAGGTTCGT-TGTGGAGAAAGCCAC 1130 ||| || |||||||| |||||||| |||||||||||||| || | |||||||||| || Sbjct 1148 ACCTTCGCCGTGCTTACATTTGTGGTATTGTGCATAAGGTTTGTCT-TGGAGAAAGCAAC 1206 Query 1131 GGCTGGTAGCATCACTGAGTGGTCTTCTGAAGATGCACTAACATTGCTTGACTACTTTGC 1190 | |||||||| |||| | ||||| |||||||||||||| || | |||||||||||||| Sbjct 1207 GTCTGGTAGCTTCACCAACTGGTCATCTGAAGATGCACTGACGCTACTTGACTACTTTGC 1266 Query 1191 AATTGCTGTTACCATTATAGTCGTTGCTGTACCTGAAGGGTTACCTTTGGCTGTGACCTT 1250 |||| |||| || || || |||||||| || || ||||| || || |||| |||||||| Sbjct 1267 AATTTCTGTAACTATCATTGTCGTTGCCGTGCCCGAAGGTTTGCCACTGGCAGTGACCTT 1326 Query 1251 AAGTCTAGCATTTGCTATGAAGCAA-TTAATGAGTGATAGGGCACTTGTAAGGCATCTGG 1309 |||| | ||||||||||||||| || | |||||||| ||||||||||| |||||||| | Sbjct 1327 AAGTTTGGCATTTGCTATGAAG-AAGCTGATGAGTGACAGGGCACTTGTGAGGCATCTTG 1385 Query 1310 CTGCATGTGAGACGATGGGTTCTTCTACCTGCATCTGCACGGATAAAACAGGGACCTTAA 1369 ||||||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||| | Sbjct 1386 CTGCATGTGAGACTATGGGTTCTTCTACTTGCATCTGCACTGATAAGACAGGGACCTTGA 1445 Query 1370 CCACTAACCACATGGTAGTCAACAAAGTTTGGATATGTGA-AA-ATATCAAAGAGAGGCA 1427 | ||||| |||||||| ||||||||||| ||||| ||||| || | || |||||||||| Sbjct 1446 CTACTAATCACATGGTGGTCAACAAAGTATGGATCTGTGATAAGGT-TC-AAGAGAGGCA 1503 Query 1428 AGA--G--G-A-A-A-A-CTTCCAGTT-GAACCTATCC-GAACAAGTTAAGAATATCCTT 1476 ||| | | | | | | ||| ||||| ||| ||| || ||| ||||| ||| ||| ||| Sbjct 1504 AGAGGGAAGTACAGAGAGCTTTCAGTTGGAA-CTA-CCAGAAGAAGTTCAGAGTATTCTT 1561 Query 1477 ATACAGGCCATATTTCAGAACACTGGTTCTGAAGTTGTTAAGGATAAGGAAGGAAAAACT 1536 | |||| |||||||||||||||||||||||||||||||| |||||| || ||||| ||| Sbjct 1562 TTGCAGGGCATATTTCAGAACACTGGTTCTGAAGTTGTTAGGGATAAAGATGGAAACACT 1621 Query 1537 CAGATCCTGGGTTCACCTACAGAAAGGGCGATACTGGAATTTGGTTTGCTTTTGGGTGGT 1596 |||||||| || || || |||||||| || ||||| ||||| |||||| |||| |||||| Sbjct 1622 CAGATCCTAGGATCCCCGACAGAAAGAGCAATACTCGAATTCGGTTTGGTTTTAGGTGGT 1681 Query 1597 GACGTTGACACGCAACGCCGAGAACATAAGATACTCAAGATCGAGCCATTCAACTCAGAC 1656 || || ||||||| || ||| ||||||||||||||||| ||||| ||||| |||||| Sbjct 1682 GATTTTAACACGCAGCGTAAAGAGCATAAGATACTCAAGATTGAGCCGTTCAATTCAGAC 1741 Query 1657 AAGAAGAAAATGTCTGTTCTTACATCTCAT-TCAGGTGGTAAAGTACGTGCTTTCTGCAA 1715 |||||||||||||||||||| | | ||| | | || ||| | ||| ||||||||||| Sbjct 1742 AAGAAGAAAATGTCTGTTCTCATAACTC-TCCCTGGAGGTGGCGCACGGGCTTTCTGCAA 1800 Query 1716 AGGTGCATCTGAAATAGTCTTGAAAATGTGTGAGAAGGTTGTGGATTCAAACGGAGAATC 1775 ||| |||||||||||||| ||||||||||| ||||| |||||||||||||| |||||||| Sbjct 1801 AGGGGCATCTGAAATAGTGTTGAAAATGTGCGAGAATGTTGTGGATTCAAATGGAGAATC 1860 Query 1776 TGTTCCTTTATCTGAAGAAAAG-ATTGCAAGTATCTCTGATGTCATAGAGGGATTTGCTT 1834 |||||| || |||||| || | ||| ||||||||||||||||||||||||| ||||| | Sbjct 1861 TGTTCCACTAACTGAAG-AACGAATTACAAGTATCTCTGATGTCATAGAGGGTTTTGCCT 1919 Query 1835 CAGAGGCTCTT-AGGACTCTCTGCTTAGTTTACACGGATCTTGATGAAGCTCCCAGAGGG 1893 |||||||| || |||||||||||||| ||||||| ||||| |||||||||||||| || Sbjct 1920 CAGAGGCT-TTGAGGACTCTCTGCTTGGTTTACAAAGATCTGGATGAAGCTCCCAGTGGA 1978 Query 1894 GATCTTCCTAATGGTGGCTACACATTGGTAGCAGTTGTTGGAATCAAGGACCCGGTTCGG 1953 ||||| ||| |||| ||||| ||| || |||||||||||||||||||||| || || ||| Sbjct 1979 GATCTCCCTGATGGAGGCTATACAATGATAGCAGTTGTTGGAATCAAGGATCCAGTACGG 2038 Query 1954 CCTGGTGTTAGGGAAGCCGTTCAGACTTGTCAAGCTGCTGGAATCACTGTTCGTATGGTC 2013 || |||||||||||||| || |||||||||||||||||||||||||| || ||||||||| Sbjct 2039 CCGGGTGTTAGGGAAGCTGTCCAGACTTGTCAAGCTGCTGGAATCACCGTCCGTATGGTC 2098 Query 2014 ACTGGTGATAACATTAGCACTGCCAAAGCGATTGCAAAGGAATGTGGTATACT-TACAGC 2072 ||||| |||||||| ||||| || ||||| ||||||||||||||||||||| | ||| | Sbjct 2099 ACTGGAGATAACATAAGCACAGCAAAAGCAATTGCAAAGGAATGTGGTATA-TATACTGA 2157 Query 2073 AGGAGGTGTAGCTATAGAAGGTTCAGACTTCCGTAATTTGCCTCCACATGAAATGAGGGC 2132 ||||||| ||||||| ||||||||||| ||||| | || |||| || ||||||||||| Sbjct 2158 AGGAGGTTTAGCTATCGAAGGTTCAGAATTCCGGGACTTATCTCCTCACGAAATGAGGGC 2217 Query 2133 CATTCTACCGAAAATCCAGGTGATGGCTCGGTCTTTGCCATTGGACAAACATACATTAGT 2192 |||| | || ||||| ||||| |||||||||||| |||| ||||| |||||||| ||||| Sbjct 2218 CATTATCCCCAAAATTCAGGTAATGGCTCGGTCTCTGCCCTTGGATAAACATACTTTAGT 2277 Query 2193 CAACAACTTGAGGAAAATGGGAGAGGTAGTTGCAGTGACTGGGGATGGAACAAATGATGC 2252 || ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct 2278 CAGCAACTTGAGGAAAATTGGAGAGGTAGTTGCAGTGACTGGGGATGGGACAAATGATGC 2337 Query 2253 TCCTGCATTGCATGAGGCTGACATTGGACTTGCCATGGGAATAGCTGGAACAGAGGTTGC 2312 ||||| ||||||||||| |||||||||||||| |||||||||||||| ||||||||||| Sbjct 2338 CCCTGCCTTGCATGAGGCAGACATTGGACTTGCAATGGGAATAGCTGGGACAGAGGTTGC 2397 Query 2313 GAAAGAGAATGCTGATGTTATCATAATGGACGACAACTTTGCAACAATAGTGAATGTGGC 2372 |||||||||||||||||| |||||||||||||| ||||| ||||||||| |||||||| Sbjct 2398 GAAAGAGAATGCTGATGTGATCATAATGGACGATAACTTCAAAACAATAGTAAATGTGGC 2457 Query 2373 AAAATGGGGACGTGCTGTGTATATCAACATCCAGAAGTTTGTTCAGTTCCAGCTAACTGT 2432 | ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct 2458 TAGATGGGGACGTGCTGTGTATATAAACATTCAGAAGTTTGTTCAGTTCCAGCTAACTGT 2517 Query 2433 TAATGTTGTTGCTCTGATCATCAACTTTGTCTCTGCTTGCATCACTGGATCTGCGCCACT 2492 |||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct 2518 TAATGTGGTTGCTCTGATCATCAACTTTGTCTCTGCTTGCATCACAGGATCTGCTCCACT 2577 Query 2493 CACCGCAGTGCAACTGCTTTGGGTGAACATGATCATGGACACACTTGGTGCATTGGCTCT 2552 ||| || |||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct 2578 CACTGCTGTGCAACTTCTTTGGGTCAACATGATCATGGACACACTTGGTGCATTGGCTCT 2637 Query 2553 AGCGACCGAACCTCCCAACGAAGGTTTAATGAAACGC-CAACCAATCGGTAGAACAGCAA 2611 ||| || ||||||||||| ||||||||||||||||| || ||||||| |||||| || | Sbjct 2638 AGCAACAGAACCTCCCAATGAAGGTTTAATGAAACGTGCA-CCAATCGTTAGAACCGCCA 2696 Query 2612 GCTTCATCACCAGAGCTATGTGGAGAAACATCATTGGTCAAAGCATTTATCAGTTAATCG 2671 |||||||||||| | | ||||||||||||||| ||||||||| |||| ||||| || | Sbjct 2697 GCTTCATCACCAAAACCATGTGGAGAAACATCGCCGGTCAAAGCGTTTACCAGTTGATTG 2756 Query 2672 TTCTCGGCA-TCCTCAACTTTGCTGGCAAA-CAAATACTCAACCTTAATGGCCCAGATTC 2729 | || || | | ||||| ||||| |||||| || | ||||| || ||||||| || || Sbjct 2757 T-CTTGGGAATTCTCAATTTTGCAGGCAAATCACTT-CTCAAACTCGATGGCCCTGACTC 2814 Query 2730 AACAATTGTTCTCAACACAATTATCTTCAACTCTTTCGTCTTTTGCCAGGTGTTTAATGA 2789 ||| |||||| ||||| | ||||||||||| ||||||||||||||||| || ||||| Sbjct 2815 CACAGCTGTTCTTAACACGGTCATCTTCAACTCCTTCGTCTTTTGCCAGGTATTCAATGA 2874 Query 2790 -AGTAAACAGCAGAGAGATAGAGAAGATAAATGTGTTCGA-AGGAATGTTCAAGAGTTGG 2847 | | || ||| | || ||||||||||||||||||||| | |||||||||||| || ||| Sbjct 2875 GA-TCAATAGCCGTGAAATAGAGAAGATAAATGTGTTC-ACAGGAATGTTCAATAGCTGG 2932 Query 2848 GTGTTTGT-TGCTGTAATGACTGCAACAGTTG-GATTCCAAGTGATCATTGTTGAGTTCC 2905 || || || |||||||||| || || | | ||| |||||||||| || ||||| | Sbjct 2933 GTCTTCACATGG-GTAATGACTGTGACCGTAGTGTTTC-AAGTGATCATAGTGGAGTTTC 2990 Query 2906 TTGGAGCATTTGCAAGCACTGTTCCTTTGAGCTGGCAACATTGGCTACTCTGCATT-TTG 2964 ||||||||||||| ||||| |||||||||||||||||||||||| |||| | || | ||| Sbjct 2991 TTGGAGCATTTGCTAGCACCGTTCCTTTGAGCTGGCAACATTGGTTACTAT-CAATCTTG 3049 Query 2965 ATTGGTTCCGTAAGCATGATTCTAGCCGTTGGTCTT-AAATGCATACCGGTTGAGTCTAA 3023 || || || | ||||||||| |||||||| || | ||||||||||| || |||||| Sbjct 3050 ATAGGATCATTGAGCATGATTGTAGCCGTTA-TCCTCAAATGCATACCCGTCGAGTCTT- 3107 Query 3024 C-CGTCATCACGATGGCTATGAGCTGCTTCCTTCTGGTCCATCT 3066 | | |||||||||||||| || ||||||||||||||||| ||| Sbjct 3108 CTCACCATCACGATGGCTACGACCTGCTTCCTTCTGGTCCTTCT 3151 > Ahg490855 jgi|Araly1|490855|fgenesh2_kg.7__288__AT4G37640.1 Length=3341 Score = 259 bits (140), Expect = 9e-68 Identities = 478/636 (75%), Gaps = 43/636 (7%) Strand=Plus/Plus Query 1928 TTGTTGGAATCAAGGACCCGGTTCGGCCTGGTGTTAGGGAAGCCGTTCAGAC-TTGTCAA 1986 |||| || ||||| || || ||||| ||||| || | ||| ||||| || | ||||| Sbjct 2053 TTGTGGGGATCAAAGATCCTGTTCGTCCTGGAGTCAAAGAATCCGTTGAG-CTTTGTC-- 2109 Query 1987 G-C-TGCTGGAATCACTGTTCGTATGGTCACTGGTGATAACATTAGCACTGCCAAAGCGA 2044 | | ||||||||||||||| | ||||| || || |||||||||| ||| || ||||| | Sbjct 2110 GTCGTGCTGGAATCACTGTGAGAATGGTTACAGGAGATAACATTAACACCGCGAAAGCAA 2169 Query 2045 TTGCAAAG-GAATGTGGTATACTT-ACAGCAGGA-GGTGTAGCTATAGAAGGTTCAG-AC 2100 |||| || |||||||| || || || | | || ||| |||| || || ||| | | | Sbjct 2170 TTGC-TAGAGAATGTGGGAT-TTTAACTG-ATGACGGTATAGCCATCGAGGGTCCCGTA- 2225 Query 2101 TTCCGTA-ATTTGCCTCCACATGAAATGAG-GGCCA-TTCT-A--CCGAAA-ATCCAGGT 2153 ||| | | | | | || | | || ||| | | || | || ||| || ||||| Sbjct 2226 TTCAG-AGAGAAGAAT-CA-A-G-AA-GAGTTACTAGAACTGATTCC-AAAGATTCAGGT 2278 Query 2154 GATGGCTCGGTCTTTGCCATTGGACAAACATACA-TTAGT-CAACAACTTGAGGA-AA-A 2209 |||||| || |||| |||| |||| ||||||||| || || ||| | || |||| || Sbjct 2279 GATGGCCCGTTCTTCGCCAATGGATAAACATACACTT-GTGAAAC-AGTTAAGGACAACG 2336 Query 2210 TGGGA-GAGGTAGTTGCAGTGACTGGGGATGGAACAAATGATGCTCCTGCA-TTGCATGA 2267 | || || || ||||| || ||||| ||||||||||||||||| |||||| || ||||| Sbjct 2337 TTTGATGAAGTTGTTGCTGTCACTGGAGATGGAACAAATGATGCACCTGCACTT-CATGA 2395 Query 2268 GGCTGACATTGGACTTGCCATGGGAATAGCTGGAACAGAGGTTGCGAAAGAGAATGCTGA 2327 ||||| || ||||| || |||||||| |||||||| || || |||||||||| ||||| Sbjct 2396 AGCTGATATCGGACTAGCTATGGGAATTGCTGGAACTGAAGTGGCGAAAGAGAGCGCTGA 2455 Query 2328 TGTTATCATAATGGACGACAACTT-TGCAACAATAGTGA-ATGTGGCAAAATGGGGACGT 2385 ||| ||||| | ||||| ||||| || || || || | | || || |||||||||||| Sbjct 2456 TGTCATCATTCTCGACGATAACTTCAGC-ACGATCGTCACA-GTTGCTAAATGGGGACGT 2513 Query 2386 GCTGTGTATATCAACATCCAGAAGTTTGTTCAGTTCCAGCTAACTGTTAATGTTGTTGCT 2445 |||| || || ||||| ||||| || |||||||| ||||| || ||||||||||||||| Sbjct 2514 TCTGTTTACATAAACATACAGAAATTCGTTCAGTTTCAGCTTACGGTTAATGTTGTTGCT 2573 Query 2446 CTGATCATCAACTTTGTC-TCTGCTTGCATCACTGGATCTGCGCCACTCACCGCAGTGCA 2504 ||| | | ||| || || || |||||| | || ||| ||| || | || || || || Sbjct 2574 CTGGTTGTTAAC-TTCTCTTCAGCTTGCTTAACCGGAAGTGCTCCTTTAACTGCTGTTCA 2632 Query 2505 ACTGCTTTGGGTGAACATGATCATGGACACACTTGG 2540 |||| ||||||||||||||||||||||||||||| Sbjct 2633 GTTGCTATGGGTGAACATGATCATGGACACACTTGG 2668 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 123687112250 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5