BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G57710.1
Length=2724
Score E
Sequences producing significant alignments: (Bits) Value
Ahg938755 jgi|Araly1|938755|scaffold_502946.1 1652 0.0
Ahg938754 jgi|Araly1|938754|scaffold_502945.1 1522 0.0
Ahg938756 jgi|Araly1|938756|scaffold_502947.1 717 0.0
Ahg486223 jgi|Araly1|486223|fgenesh2_kg.5__2215__AT3G57730.1 448 1e-124
> Ahg938755 jgi|Araly1|938755|scaffold_502946.1
Length=1105
Score = 1652 bits (894), Expect = 0.0
Identities = 1028/1093 (94%), Gaps = 8/1093 (1%)
Strand=Plus/Plus
Query 96 TTTGGTAAAGGAACTAATGAAGAAGCAGTATCTGAAATCTGGATCT--G----GGACAAG 149
|||| |||| ||||| |||||||||||||||||||||||||| ||| | |||||||
Sbjct 8 TTTGATAAACGAACTGATGAAGAAGCAGTATCTGAAATCTGGGTCTGGGTCTCGGACAAG 67
Query 150 GAAGGAAAAGGACAAGGCGAAGAGGTGGTTCTTGGATAACGGAAGCATCTTCTTAAGAGA 209
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||
Sbjct 68 GAAGGAAAAGGACAAGACGAAGAGGTGGTTCTTGGATAACGGAAGCATCTTCTTAACAGA 127
Query 210 ACTTGTAGCTGATTGTAACGGTAAATCCATTCCTATTCGCAGTTTTTCTCCTGAGCAGAT 269
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 128 ACTTGTCGCTGATTGTAACGGTAAATCCATTCCTATTCGCAGTTTTTCTCCTGAGCAGAT 187
Query 270 ATTGAAAGCCACCAACAATTTCGATTCTAGCTGTTTTGTCTCGCAAGATGTATACTATAA 329
||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 188 ATTGAAAGCTACCAACAATTTCGATTCTAGTTGTTTTGTCTCGCAAGATGTATACTATAA 247
Query 330 ATGGTATAGAGGTGAAATTGAAGATAGATCTTACATGATCAAGAGATTCTCAGAGGATGA 389
|||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct 248 GTGGTATAGAGGTCAAATCGAAGATAGATCTTACATGATCAAGAGATTCTCCGAGGATGA 307
Query 390 GATTACAGGAAAACGACATAGAGTTAAAGAGGTTTACAACGACATTGTCTTGTCTGCTCG 449
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 308 AATTACAGGAAAACGACATAGAGTTAAAGAGGTTTACAACGACATTGTCTTGTCTGCTCG 367
Query 450 GATGAGTAATCACAGTAACTTTCTTCAACTTTTAGGATGTTGTCTCGAGTTTCCTTTTCC 509
||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||
Sbjct 368 GATGAGTAATCACAGCAACTTTCTGAAACTATTAGGATGTTGTCTCGAGTTTCCTTTTCC 427
Query 510 GGTTCTTGTGTTTGAATTTGCAGAACATGGAGCTATGAATCAGCGAGGAGGTGTTATAGT 569
|||||||||||||||||| |||||| |||||||| |||||||||| |||||| |||| ||
Sbjct 428 GGTTCTTGTGTTTGAATTCGCAGAATATGGAGCTTTGAATCAGCGTGGAGGTATTATGGT 487
Query 570 TAATGGTGAAGAATCTTTATTGCCGTGGAGTGTACGGTTGAAGATTGGGAAAGAGATTGC 629
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct 488 TAATGGTGAAGAATATATATTGCCGTGGAGTGTACGGTTGAAGATTGGGAAAGAGATTGC 547
Query 630 TAATGCGGTGACTTATCTTCACACGGCATTCCCTAAGATCATCATACATAGAGATGTTAA 689
||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 548 AAATGCTGTGAGTTATCTTCACATGGCATTCCCTAAGATCATCATACATAGAGATGTTAA 607
Query 690 ACCGATGCATGTTTTCTTGGACAAGAATTGGACCGCAAAGTTGTCTGATTTATCCTTCTC 749
||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 608 ACCAATGCACGTTTTCTTGGACAAGAACTGGACCGCAAAGTTGTCTGATTTATCCTTCTC 667
Query 750 AATATCTCTACCTGAGGGAAAATCGAGAATAGAAGCTGAATGGGTTCTAGGAACATTTGG 809
||||||||| ||||| |||||||| ||||||||||||||||||||||| |||||||||||
Sbjct 668 AATATCTCTCCCTGAAGGAAAATCAAGAATAGAAGCTGAATGGGTTCTTGGAACATTTGG 727
Query 810 GTACATCGATCCATTATATCATAAGACGTGTTTTGTGACTGAATATACAGATGTCTACAG 869
|||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct 728 GTACCTCGATCCATTATATCATAAGACGAGTTTTGTGACTGAATATACCGATGTCTACAG 787
Query 870 CTTTGGAATCTGTTTGCTGGTTATTATTACTGGTAAACCGGCTATCATGACTATTTCTGA 929
||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||
Sbjct 788 CTTTGGAATCTGTTTTCTGGTTATTCTTACTGGTAAACCGGCTATCATCACTATTTCTGA 847
Query 930 TGGAGATCTCCAAGGTATTCTTAGCT-TAGTGAGAGAGTTATGTGAGAATGGGAAGCTTG 988
|||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||| |
Sbjct 848 TGGAGATCTCCAAGGTATTCTTAGCTAT-GTGAGAGGGTTATGTGAGAATGGGAAGCTCG 906
Query 989 ATGAAGTGATAGATCCGAGGTTGATGAAAGATATCACAAGTGGTCAAAGGTTGCAAGTGG 1048
||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct 907 ATGAAGTAATAGATCCAATGTTGATGAAAGATATCACAAGTGGTCAAAGGTTGCAAGTGG 966
Query 1049 AAGCATGTGTGGTGCTGGCTTTGAGATGCTGTAAGGAGAGAGATGAAGACAGACCAAAGA 1108
|||| ||||||| ||| ||||||||||||||| |||| ||||||||||||||||||||||
Sbjct 967 AAGCTTGTGTGGAGCTTGCTTTGAGATGCTGTGAGGAAAGAGATGAAGACAGACCAAAGA 1026
Query 1109 TGATCCAAGTAGCTAAAGAACTCAAGCAGATTGAAGCATCATTGAAAAATTCTAGCTAGA 1168
||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||
Sbjct 1027 TGATCCAAGTAGCTAAAGAACTCAAGCGGATTGAAGCATCACTGAGAAATTCTAGCTAGA 1086
Query 1169 GATCCGCAAGGAA 1181
||||| |||||||
Sbjct 1087 GATCCTCAAGGAA 1099
> Ahg938754 jgi|Araly1|938754|scaffold_502945.1
Length=1070
Score = 1522 bits (824), Expect = 0.0
Identities = 963/1030 (93%), Gaps = 10/1030 (1%)
Strand=Plus/Minus
Query 1468 TGTTTCTCTATCTTCTTAAGCTCTTTTGCAACGTCTATCATGCGAGGCACGTTCTCTCCT 1527
||||| ||||||||||| || |||||||| | ||||||||| ||||||||||||||||||
Sbjct 1043 TGTTTTTCTATCTTCTTGAGTTCTTTTGCGATGTCTATCATACGAGGCACGTTCTCTCCT 984
Query 1528 GGTCTGAATCTTACACATCTAAAAGCAAGCTCAATGAACGCTTCCATTTGCAGTCTTGAA 1587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 983 GGTCTGAATCTTACACATCTAAAAGCAAGCTCAATGAACGCTTCCATTTGCAGTCTTGAA 924
Query 1588 TGCTTGGGAATGTCATCACTCGTGCTGTCCAATATCGACGGGTCTATGAGTTCAGTCAAC 1647
|||| ||||||||| ||||||| ||||||||| ||| |||||||||| || |||||||||
Sbjct 923 TGCTGGGGAATGTCGTCACTCGCGCTGTCCAACATCAACGGGTCTATCAGCTCAGTCAAC 864
Query 1648 AAACCTCGCTCCAGAAACTTCCCAACATAGACAGGCAATACAGGAAGATAAACAGCGACT 1707
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct 863 AAACCTCGCTCCAGAAACTTCCCAACATAGACAGGCAATGCAGGAAGATAAACAGCAACT 804
Query 1708 TCTGAATTGTATTCAGACTTTCCTGTCAAAATAATTAGCATGATGATCCCAAGACTATAG 1767
|| ||| |||||||||||||| || |||||| || |||||||||||||||||| |||||
Sbjct 803 TCGGAAGTGTATTCAGACTTTTCTCTCAAAAGAACTAGCATGATGATCCCAAGGTTATAG 744
Query 1768 ATGTCGACATTCTCGGTGACCAAACCTGTATTAAAGTAATCAGGCTCGATATAGCTTGAT 1827
|| ||||||||||| ||||||||||||||||| | |||| | |||||||||||||| |||
Sbjct 743 ATATCGACATTCTCAGTGACCAAACCTGTATTGAGGTAACCGGGCTCGATATAGCTCGAT 684
Query 1828 GTCCTGCAAACCATGTCATTTACGCCAGTTTCACCCTCTGGAAGCACTATACTGAGGCTG 1887
||| |||||||||||||||||||||| ||||| || ||||||| || || ||||||||||
Sbjct 683 GTCTTGCAAACCATGTCATTTACGCCCGTTTCTCCTTCTGGAATCAGTACACTGAGGCTG 624
Query 1888 AAAGAAGAGAGCTT-AGCGGACCAATTCTCGTCAAGGAAAATATTTGCAAGCTTTAAATC 1946
|||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||
Sbjct 623 AAAGAAGAGAGCTTGA-CGGACCAATTCTCGTCCAGGAAAATATTTGCAAGCTTTAAATC 565
Query 1947 CCTATGGATTATAGTCCTGGGGAATTCAGTATGAAGATACGCTACAGCATCTGCAATCTC 2006
|||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||
Sbjct 564 CCTATGGATTATAGTCCTAGGGAATTCAGTATGCAGATACGTTACAGCATCTGCAATCTC 505
Query 2007 CTTGGCGATTCTCAACCTTACATTCCAAGGGAATGACCGGACGCCTTCTTTTCCACATCT 2066
||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct 504 CTTGGCGATTCTCAACCTTACATTCCAAGGGAATGGCCGGACGCCTTCTTTTCCACGTCT 445
Query 2067 TATACAGTTTAGAGCTCCATGTTCTGGATATTCACACACGAGAACCGGACGAGGAAACTC 2126
|||||||||||||||||||| |||||| || |||||||||||||| ||||||||||||||
Sbjct 444 TATACAGTTTAGAGCTCCATTTTCTGGGTACTCACACACGAGAACAGGACGAGGAAACTC 385
Query 2127 TAGACAACACCCCAAGA-GCTTGAGAACATTCTTATGGCTACTCATCAAAGATGAAACAG 2185
|||||||||||| | || |||||||||||||||||||||||||||||||||||||||| |
Sbjct 384 TAGACAACACCCTA-GAAGCTTGAGAACATTCTTATGGCTACTCATCAAAGATGAAACCG 326
Query 2186 CAATGTCACGGTAAAAGTTGTCAGCGTCGAAAACAGAACAGTCTTGGAATTTCTTGATCA 2245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 325 CAATGTCACGGTAAAAGTTGTCAGCGTCGAAAACAGAACAGTCTTGGAATTTCTTGATCA 266
Query 2246 GTACGGGTCTGTTTTCAATCATGCCTTTGTACCACACGAATCTGTCTTCAGAGATTACGT 2305
||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 265 GTACGAGTCTGTTTTCAATCATACCTTTGTACCACACGAATCTGTCTTCAGAGATTACGT 206
Query 2306 AGTTCCAGTCAAAGTGATTTGTAGCTTGTAGGATTTGGTCGGAAGAAAACGTACGGATGG 2365
|||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct 205 AGTTCCAGTCAAAGTGATTTGTGGCTTGAAGGATTTGGTCGGAAGAAAACGTACGGATGG 146
Query 2366 GATTGTATATACCTCCTGAAGTTGCAATGAGTTCTTCCAACAGTAAGCTCCCATTCTTCT 2425
|||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 145 GATTGTATTTACCTCCTGAAGTTGCAATGAGTTCTTCCAACAATAAGCTCCCATTCTTCT 86
Query 2426 GGAGATTGATCTCCtcttctttcttctgcttcttcttctt-t-ct----GAACAGACGCA 2479
||| ||||||||||| |||||||||||||||||||||||| | || |||||||||||
Sbjct 85 GGAAATTGATCTCCTTTTCTTTCTTCTGCTTCTTCTTCTTCTTCTTTCTGAACAGACGCA 26
Query 2480 ACATCTCTAA 2489
||||||||||
Sbjct 25 ACATCTCTAA 16
> Ahg938756 jgi|Araly1|938756|scaffold_502947.1
Length=1125
Score = 717 bits (388), Expect = 0.0
Identities = 857/1074 (80%), Gaps = 69/1074 (6%)
Strand=Plus/Plus
Query 117 GAAGCAGTA-TCTGAAATCTGGATC-T--GGGACAAGGAAGGAAAAGG-ACAAG----GC 167
||||||| | ||||| ||||||||| | | || |||||||||||||| | ||| |
Sbjct 45 GAAGCAG-AGTCTGAGATCTGGATCGTCAGAGAAAAGGAAGGAAAAGGAAAAAGACATTC 103
Query 168 --GAAG--AGGTGGTTCTTGGATAACGGAAGCATCTTCTT-AAGAGAACTTGTAGCTGAT 222
|||| ||||| |||||||| ||||||||||||||||| || ||||||| | ||||||
Sbjct 104 AGGAAGAAAGGTGTTTCTTGGAAAACGGAAGCATCTTCTTGAA-AGAACTTATTGCTGAT 162
Query 223 TGTAACGGTAAATCCATTCCTATTCGCAGTTTTTCTCCTGAGCAGATATTGAAAGCCACC 282
||||||||||||||||||||||| || || |||||| |||| ||||| |||||||| ||
Sbjct 163 TGTAACGGTAAATCCATTCCTATACGTAGCTTTTCTTCTGATCAGATCTTGAAAGCTAC- 221
Query 283 AAC-AATTTCGATTCTAGCTGTTTTGTCTC-GCA-AGATGTATACTATAAATGGTATAGA 339
|| || |||| ||| || |||||||| | || || || | ||| ||||| | |
Sbjct 222 AAGTAACTTCGGTTCCAGTTGTTTTGTAACCGCTGAGGGGT-T-CTACGTGTGGTACAAA 279
Query 340 GGTGAA-ATTGAAGATAGATCTTACATGATCAAGAGATTCTCAGAGGATGA-GATTACAG 397
||| | || |||||||||||||||||||||||||||||||| ||| || | | ||||
Sbjct 280 GGT-ATCATAGAAGATAGATCTTACATGATCAAGAGATTCTCCGAGTATAAAG-TTACTC 337
Query 398 GAAAACGACATAGAGTTAA-AGAGGTTTACAACGACATTGTCTTGTCTGCTCGGATGAGT 456
| || | |||| | ||||||||||||||| ||||| |||||||||||||||||
Sbjct 338 -ATTAC-A----GAGT-AGCAGAGGTTTACAACGAGATTGTTTTGTCTGCTCGGATGAGC 390
Query 457 AATCACAGTAACTTTCTTCAACTTTTAGGATGT-TGTCTCGAGTTTCCTTTTCCGGTTCT 515
|| |||| ||||||||| |||| |||||| | ||||| |||||| | ||||||||||
Sbjct 391 AACCACAACAACTTTCTTAAACTAGTAGGAT-TCTGTCTTGAGTTTTGTCTTCCGGTTCT 449
Query 516 TGTGTTTGAATTTGCAGAACATGGAGCTATGAATCAGC-GAGGAGGTGTTATAGTTAATG 574
||||||||||| |||||| ||||||| | ||||||| | ||||||||||||| |||||||
Sbjct 450 TGTGTTTGAATATGCAGAGCATGGAGTTCTGAATCA-CAGAGGAGGTGTTATGGTTAATG 508
Query 575 GTGAAGAATCTTTATTGCCGTGGAGTGTACGGTTGAAGATTGGGAAAG-AGATTGCTAAT 633
| || |||| | ||||||| | |||| || ||||||||||||| |||| ||||||| |||
Sbjct 509 GGGAGGAATATATATTGCCTTTGAGTTTAAGGTTGAAGATTGG-AAAGGAGATTGCAAAT 567
Query 634 GCGGTGACTTATCTTCACACGGCATTCCCTAAGATCATCATACATAGAGATGTTAAACCG 693
|| |||||||||||||||| ||| ||||| |||||| ||||||||||| | |||| ||
Sbjct 568 GCCGTGACTTATCTTCACATGGCGTTCCCCAAGATCCTCATACATAGACACATTAATCCA 627
Query 694 ATGCATGTTTTCTTGGACAAGAATTGGACCGCAAAGTTGTCTGATTTATCCTTCTCAATA 753
| | ||||||| ||||||||||||||||| ||||||||||||||||| ||| |||| |||
Sbjct 628 AGGAATGTTTTTTTGGACAAGAATTGGACTGCAAAGTTGTCTGATTTCTCCATCTCCATA 687
Query 754 T-C-TCTACCTGAGGGAAAATCGAGAATAGAAGCTGAATGGGTTCTAGG-AACATTTGGG 810
| || |||||||||||||| || ||||||| |||||| |||| ||| |||| | |||
Sbjct 688 AACATC--CCTGAGGGAAAATCAAGGATAGAAGTTGAATGCGTTC-AGGGAACAATCGGG 744
Query 811 TACATCGATCCATTATATCATAAGACGTGTTTTGTGACTGAATATACAGATGTCTACAGC 870
||| |||||||| ||||| ||| ||| | |||||||||||||| ||||| ||||||
Sbjct 745 TACCTCGATCCAGTATATTATACCACGAAAATGGTGACTGAATATACCGATGTGTACAGC 804
Query 871 TTTGGAATCTGTTTGCTGGTTATTATTACTGGTAAACCGGCTATC--ATG-ACTATTTCT 927
|||||| ||| |||| ||||| || | |||| || ||| ||| || || |||| |||
Sbjct 805 TTTGGAGTCTTTTTGATGGTTGTTCTCACTGCTAGACCAGCTCTCGCATCCACTAGCTCT 864
Query 928 GATGGAGATCTCCAAGG-TATT-CTTAGCT-TAGTGAGAGAG-TTATG-TGAGAATGGGA 982
||||| || || ||| |||| || ||| | |||| || | || | ||||||||||
Sbjct 865 GATGGGGA-CTACAAACATATTGCTG-GCTAT-GTGAAAG-GCTT-TCATGAGAATGGGC 919
Query 983 AGCTTGATG-AAGTGATAGATCCGA-GGTTGATGAAAGATATCACAAGTGGTCAAAG-GT 1039
|||| |||| || | |||||| | | ||| |||| |||| || ||||||| ||||| ||
Sbjct 920 AGCTCGATGGAA-TAATAGATTCAAAGGT-GATGGAAGACATTACAAGTGCTCAAAAAGT 977
Query 1040 TGCAAGTGGAAGCATGTGTGGTGCT-GG-CTTTGAGATGCTGTAAGGAGAGAGATGAAGA 1097
|| |||||||| ||||||||| | || || |||||| ||| || |||||||||| |
Sbjct 978 -GCTTGTGGAAGCGTGTGTGGTGTTAGGGCT--GAGATGTTGTGAGCTGAGAGATGAAAA 1034
Query 1098 CAGACCAAAGATGATCCAAGTAGCTAAAGAACTCAAGCAGATTGAAGCATCATT 1151
|||||| |||||||||||| ||||||||||||||||||||||||| |||| |||
Sbjct 1035 CAGACCGAAGATGATCCAAATAGCTAAAGAACTCAAGCAGATTGAGGCATTATT 1088
> Ahg486223 jgi|Araly1|486223|fgenesh2_kg.5__2215__AT3G57730.1
Length=1465
Score = 448 bits (242), Expect = 1e-124
Identities = 444/539 (82%), Gaps = 23/539 (4%)
Strand=Plus/Plus
Query 168 GAAGAGGTGGTTCTTGGATAACGGAAGCATCTTCTTAAGAGAACTTGTAGCTGATTGTAA 227
||| || ||||| ||||| |||||||| |||||||||| ||| || | |||||||||||
Sbjct 212 GAA-AGATGGTTTTTGGAGAACGGAAGTATCTTCTTAAAAGAGCTCATCGCTGATTGTAA 270
Query 228 CGGTAAATCCATTCCTATTCGCAG-TTTTTCTCCTGAGCAGATATTG-AAAGCCACCAAC 285
||||||||||||||||| || || ||| || || ||||| | | |||||||||||
Sbjct 271 TGGTAAATCCATTCCTATACGTAGCTTTACCT-CTTCCCAGAT-TCGCAAAGCCACCAAG 328
Query 286 AATTTCGATTCTAGCTGTTTTGTCTC-GCAAGATGTATACTATAAATGGTATAGAGGTGA 344
||||||||||| || ||||||||| | | |||| | | ||| | |||||| | |||||
Sbjct 329 AATTTCGATTCCAGTTGTTTTGTCACTG-AAGAAGGGTTCTACATATGGTACAAAGGTGT 387
Query 345 AATTGAAGATAGATCTTACATGATCAAGAGATTCTCAGAGGATGAGA-TTACAGGAAAAC 403
|| |||||||||||||||||||||||||||||||| ||| || | | | ||| | |
Sbjct 388 TATCGAAGATAGATCTTACATGATCAAGAGATTCTCTGAGTAT-AAAGTCACA-G---AT 442
Query 404 GACATAGAGTTA-AAGAGGTTTACAACGACATTGTCTTGTCTGCTCGGATGAGTAATCAC 462
|| |||| || ||||||||| || |||||||||||||||||||||||||| || |||
Sbjct 443 TAC--AGAG-TAGGAGAGGTTTATAAAGACATTGTCTTGTCTGCTCGGATGAGCAACCAC 499
Query 463 AGTAACTTTCTTCAACTT-TTAGGATGTTGTCTCGAGTTT-CCTTTTCCGGTTCTTGTGT 520
|| |||||||||||| || |||||||||||||| || ||| |||||||||||||||||||
Sbjct 500 AGCAACTTTCTTCAA-TTATTAGGATGTTGTCTTGA-TTTCCCTTTTCCGGTTCTTGTGT 557
Query 521 TTGAATTTGCAGAACATGGAGCTATGAATCAGCGAGGAGGTGTTATAGTTAATGGTGAAG 580
|||||||||| ||||||||| | ||||||| ||||||||||||| ||||| || || |
Sbjct 558 TTGAATTTGCTGAACATGGATTTTTGAATCATCGAGGAGGTGTTACCGTTAACGGGGAGG 617
Query 581 AATCTTTATTGCCGTGGAGTGT-ACGGTTGAAGATTGGGAAAGAGATTGCTAATGCGGTG 639
||||||||||||| | |||| | | |||||||||||||||| |||||||| ||||| ||
Sbjct 618 AATCTTTATTGCCTTTGAGTTTGA-GGTTGAAGATTGGGAAGGAGATTGCAAATGCCTTG 676
Query 640 ACTTATCTTCACACGGCATTCCCTAAGATCATCATACATAGAGATGTTAAACCGATGCA 698
|||||||||||| ||| |||||||||||||| ||| ||||||||| || || |||||
Sbjct 677 GCTTATCTTCACATGGCTTTCCCTAAGATCATTATATTTAGAGATGTGAAGCCAATGCA 735
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 102767481010
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5