BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G58640.1 Length=3268 Score E Sequences producing significant alignments: (Bits) Value Ahg938858 jgi|Araly1|938858|scaffold_503049.1 4150 0.0 Ahg935149 jgi|Araly1|935149|scaffold_403137.1 592 7e-168 Ahg482025 jgi|Araly1|482025|fgenesh2_kg.4__1085__AT2G31010.1 579 6e-164 > Ahg938858 jgi|Araly1|938858|scaffold_503049.1 Length=2471 Score = 4150 bits (2247), Expect = 0.0 Identities = 2403/2478 (97%), Gaps = 11/2478 (0%) Strand=Plus/Plus Query 408 TAGACATTAAGGAAATTGGCAATGGGAGAGACGGGAGATGATGCTGGGCCATCAGAGCAA 467 ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 TAGACATCAAGGAAGTTGGCAATGGGAGAGACGGGAGATGATGCTGGGCCATCAGAGCAA 60 Query 468 GGACCTTCTAATCAAACCTGGTGGCCTTCAGAATTTGTGGAGAAATTTGGTTCTGTTTAT 527 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 61 GGACCTTCTAATCAAACCTGGTGGCCTTCAGAATTTGTGGAGAGATTTGGTTCTGTTTAT 120 Query 528 CTGGGATCGCAAGAAGAGA-CATCTAGTACTAAAGACTCACCTAGAAATCTTGGGCAAGA 586 ||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||| Sbjct 121 CTGGGATCGCAAGAAGAGATC-TCTAGTACTAAAGACTCACCCAGAAATCTTGGGCAAGA 179 Query 587 TGGGCTGCCATCTAGTACTGCTTCGAATATTCTTTGGAGTACTGGTTCACTTTCTGAGCC 646 |||||||||||||| |||||| || |||||||| |||||||||||||||||||||||||| Sbjct 180 TGGGCTGCCATCTACTACTGCCTCTAATATTCTCTGGAGTACTGGTTCACTTTCTGAGCC 239 Query 647 CATCCCAAATGGCTTCTACTCTGTGATCCCGGATAATAGATTGAAGCAGCTATTTAATAA 706 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 240 CATCCCAAATGGCTTCTACTCTGTGATCCCGGATAATAGATTGAAGCAACTATTTAATAG 299 Query 707 CATTCCTACATTGGAAGATCTTCATGCTCTGGGTGACGAAGGTCTTAAGGCTGATGTGAT 766 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 300 CATTCCTACATTGGAAGATCTTCATGCTCTGGGTGAGGAAGGTCTTAAGGCTGATGTGAT 359 Query 767 TCTAGTTGATTTTCAGAAAGATAAAAAGCTTTTCAGGCAGAAGCAGTTGATTACCAAACT 826 |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct 360 TCTAGTTGATTTTCAGAAAGATAAGAAGCTTTTCAGGCAAAAGCAGTTGATTACCAAACT 419 Query 827 TGTCAGTGGATTGAACTCAAAGCCAGCTACTATTATTAAGAAAATTGCTGGACTGGTAGC 886 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 420 TGTCAGTGGATTGAACTCAAAGCCACCTACTATTATTAAGAAAATTGCTGGACTGGTAGC 479 Query 887 AGATGTTTATAAGCAATCAACTCTGCAGAGTCCAGCAAAAAGTACGCAGTCATTTGAAAA 946 ||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||| Sbjct 480 AGATGTTTATAAGCAATCAACTCTGCAGAGTCCGGCAAAAACTACGCAATCATTTGAAAA 539 Query 947 CTGTGGTATTCAACTGCTAGGACAGATCAAGCATGGTTCTTGTCGTCCTCGAGCAATCTT 1006 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 540 CTGTGGTATTCAACTGCTAGGACAGATCAAGCATGGTTCTTGTCGTCCTCGAGCAATCTT 599 Query 1007 GTTCAAAGTCTTAGCTGATACTGTTGGCCTGCAAAGTCGACTTGTAGTGGGTTTGCCAAG 1066 ||||||||| ||||| ||||| ||||| || |||||| | |||||||||||||||||||| Sbjct 600 GTTCAAAGTTTTAGCGGATACCGTTGGTCTTCAAAGTAGGCTTGTAGTGGGTTTGCCAAG 659 Query 1067 TGATGGAGCTGCTGAGAGTGTGGACTCATATAGTCATATTTCTGTCACTGTTTTGCTGAA 1126 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 660 TGATGGAGCTGCTGAGAGTGTGGACTCATATAGTCATATTTCTGTCACTGTTCTGCTGAA 719 Query 1127 TTCTGTGGAAATGCTGGTTGACCTAATGCGATTTCCTGGTCAGCTTATTCCTCTATCAAC 1186 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct 720 TTCTGTGGAAATGCTGGTTGATCTAATGCGATTTCCTGGCCAGCTTATTCCTCTATCAAC 779 Query 1187 CAAAGCAATTTTTATGAGTCATATCTCAGCGGCAGGGGAAAGTGATTCTGCAGAGAATGA 1246 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 780 CAAGGCAATTTTTATGAGTCATATCTCAGCGGCAGGGGAAAGTGATTCTGCAGAGAATGA 839 Query 1247 CTCTTGTGATTCACCTTTGGAGCCAAACAGTCCCATGTTTGGTTATCCAGAGA-AATTTG 1305 ||||||||||||||||||||||||||||||||||||||||||||||||||||| || | | Sbjct 840 CTCTTGTGATTCACCTTTGGAGCCAAACAGTCCCATGTTTGGTTATCCAGAGAGAAAT-G 898 Query 1306 AC-CATGAAAATGCAGAAAAAGATGAAAACCTTTCGTTGCACAGGAAACTGGATGGGTCT 1364 || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 899 ACGC-TGAAAATGCAGAAAAAGATGAAAACCTTTCGTTGCACAGGAAACTGGATGGGTCT 957 Query 1365 CCAAATACGTCTGGTCCACCATCAAGGAATATGCTGTTACGATCTGCCTCTGCGCTAGAG 1424 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 958 CCAAATACGTCTGGTCCACCATCAAGGAATGTGCTGTTACGATCTGCCTCTGCGCTAGAG 1017 Query 1425 AGGAAATTAAGTTTCTCACAGAGCGAGTCAAACATGGCTAACGAGTTTTGGCGGCAGAGC 1484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1018 AGGAAATTAAGTTTCTCACAGAGCGAGTCAAACATGGCTAACGAGTTTTGGCGGCAGAGC 1077 Query 1485 CGGAGGAAGGTCATTGCTGATCAGCGGACTGCTAGTTCCAGTCCCGAACATCTTTCCTTC 1544 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1078 CGGAGAAAGGTCATTGCTGATCAGCGGACTGCTAGTTCCAGTCCCGAACATCTTTCCTTC 1137 Query 1545 CGAGCCCGTACAAAGTCCATGCTAAGTGGCGACAAGAACTTGGCACGAGATTTCACCGGG 1604 ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1138 CGAGCACGTACAAGGTCCATGCTAAGTGGCGACAAGAACTTGGCACGAGATTTCACCGGT 1197 Query 1605 GATGTTGCCACATCAAGCTGCAAATCTGTTGGAGGAGCAAAAATGGAAACTAAGAGAATA 1664 |||||||||| |||||||||||||||||| |||||||| ||| ||||||||||||||||| Sbjct 1198 GATGTTGCCATATCAAGCTGCAAATCTGTCGGAGGAGCGAAATTGGAAACTAAGAGAATA 1257 Query 1665 AGGAGGAGAAGCATCAGTATAACTCCTGAGATTGGCGATGATATTGTCAGGGCAGTACGA 1724 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1258 AGGAGGAGAAGCATCAGTATAACTCCTGAGATTGGCGATGATATTGTCAGGGCAGTAAGA 1317 Query 1725 GCGATGAATGAAGCCTTGAAGCAGAATCGCCTCTCAAAAGAGCAAGGGGATGATGATTCA 1784 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1318 GCGATGAATGAAGCCTTGAAGCAGAATCGCCTCTCAAAAGAGCAAGGGGATGATGGTTCA 1377 Query 1785 TCTCCTAACTCTCCAAATGACAGAACCGAGAGCTCTCATCTCCAGAAAAATGTCTCTGGT 1844 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1378 TCTCCTAACTCTCCAAATGACAGAACCGAGAGCTCTCATCTCCAGAAAAATGTCTCTGGT 1437 Query 1845 TTTCATCTTGATGCCCATGACCAAGTTTCTGGTGGAAGGTCGACACTTTCAAGGGAACCA 1904 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1438 TTTCATCTTGATGCTCATGACCAAGTTTCTGGTGGAAGGTCGACACTTTCAAGGGAACCA 1497 Query 1905 CTAGATCCGCAGAAGGCAATCTCACTACCTTCTTCTCCCCAGAACTACCGAAGCCAATAT 1964 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1498 CTAGATCCGCAGAAGGCAATCTCACTACCGTCTTCTCCCCAGAACTACCGAAGCCAATAT 1557 Query 1965 GAACAGAGTGGATCGTCACATCGCAATATAAGCCACATCTGGGATAAAGTAT-TGGGATC 2023 ||||||||||||||||||||||| ||||||||||| |||||||||||||| | ||||||| Sbjct 1558 GAACAGAGTGGATCGTCACATCGTAATATAAGCCATATCTGGGATAAAGT-TCTGGGATC 1616 Query 2024 TCCCATGTTCCAGAATAAGCCATTATTACCTTATGAAGAATGGAACATAGACTTCTCTGA 2083 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1617 TCCCATGTTCCAGAATAAGCCATTATTACCATATGAAGAATGGAACATAGACTTCTCTGA 1676 Query 2084 GCTGACTGTTGGGACACGTGTCGGAATTGGATTTTTCGGAGAAGTATTCCGTGGGATCTG 2143 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1677 GTTGACTGTTGGGACACGTGTCGGAATTGGATTTTTCGGAGAAGTATTCCGTGGGATCTG 1736 Query 2144 GAACGGGACAGACGTTGCTATCAAAGTGTTCCTTGAGCAAGACCTTACAGCTGAGAACAT 2203 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1737 GAACGGGACAGACGTTGCGATCAAAGTGTTCCTTGAGCAAGACCTTACAGCTGAGAACAT 1796 Query 2204 GGAGGATTTCTGCAATGAGATATCAATTCTTAGCCGACTTAGACATCCCAATGTTATACT 2263 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1797 GGAGGACTTCTGCAATGAGATATCAATTCTTAGCCGACTTAGACATCCCAATGTTATACT 1856 Query 2264 GTTCCTTGGAGCATGCACAAAGCCTCCACGATTATCACTGATCACTGAGTACATGGAAAT 2323 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1857 GTTCCTTGGAGCATGCACAAAGCCTCCACGATTATCATTGATCACTGAGTACATGGAAAT 1916 Query 2324 GGGATCTTTGTATTACTTGCTCCACTTGAGTGGACaaaaaaaGAGGTTAAGCTGGCGGAG 2383 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1917 GGGATCTTTGTATTATTTGCTCCACATGAGTGGACAAAAAAAGAGGTTAAGCTGGCGGAG 1976 Query 2384 GAAGCTAAAGATGCTGCGGGACATTTGCAGGGGATTGATGTGTATACACCGGATGGGGAT 2443 |||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||| Sbjct 1977 GAAGCTAAAGATGCTGCGTGACATTTGCAGGGGCTTGATGTGCATACACCGGATGGGGAT 2036 Query 2444 AGTACACCGTGATATAAAGAGTGCAAACTGTCTTTTGAGCAACAAATGGACAGTCAAGAT 2503 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 2037 AGTACACCGTGATATAAAGAGCGCAAACTGTCTTTTGAGCAACAAATGGACAGTCAAGAT 2096 Query 2504 CTGTGATTTTGGGCTGTCGAGAATAATGACAGGGACAACAATGAGAGACACAGTCTCTGC 2563 ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| || Sbjct 2097 CTGTGATTTTGGGCTCTCGAGAATAATGACAGGCACAACAATGAGAGACACAGTCTCAGC 2156 Query 2564 AGGAACTCCAGAGTGGATGGCTCCTGAACTTATCCGCAATGAGCCCTTCTCAGAAAAGTG 2623 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2157 AGGAACTCCAGAGTGGATGGCTCCTGAACTTATCCGCAATGAGCCCTTCTCAGAAAAGTG 2216 Query 2624 TGATATCTTCAGTTTAGGTGTAATAATGTGGGAGCTATGCACTTTAACCAGACCTTGGGA 2683 |||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||| Sbjct 2217 TGATATCTTCAGCTTAGGTGTAATAATGTGGGAACTCTGCACTTTAACCAGACCTTGGGA 2276 Query 2684 AGGAGTACCGCCTGAACGGGTTGTTTATGCTATTGCTTACGAGGGAGCTCGGCTTGAGAT 2743 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2277 AGGAGTACCGCCTGAACGGGTTGTTTATGCTATTGCTTACGAGGGAGCTCGGCTTGAGAT 2336 Query 2744 TCCTGAAGGACCACTGGGAAAGCTTATTGCAGATTGTTGGACAGAACCGGAACAAAGACC 2803 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2337 TCCTGAAGGACCGCTGGGAAAGCTTATTGCAGATTGTTGGACAGAACCGGAACAAAGACC 2396 Query 2804 GAGTTGCAATGAGATACTCTCTCGTTTGCTGGATTGTGAGTATTCGCTTTGCTAACTTTC 2863 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | Sbjct 2397 GAGTTGCAATGAGATACTCTCTCGTTTGCTGGATTGCGAGTATTCGCTTTGCTAACTT-C 2455 Query 2864 TCTCAATCATATTTTCCT 2881 | |||||||| ||| ||| Sbjct 2456 TGTCAATCAT-TTT-CCT 2471 > Ahg935149 jgi|Araly1|935149|scaffold_403137.1 Length=2266 Score = 592 bits (320), Expect = 7e-168 Identities = 740/938 (79%), Gaps = 48/938 (5%) Strand=Plus/Plus Query 1903 CACTAGATCCGCAGAAGGCAATCTCACTACCTTCTTCTCCCCAGAA-CTACCGAAGCCAA 1961 ||||| ||| |||||||||||| ||| | || || ||||||| ||| ||| | || |||| Sbjct 1297 CACTAAATCGGCAGAAGGCAATATCATTTCCATCATCTCCCC-GAAGCTATCAAATCCAA 1355 Query 1962 T-A--TGAACA-GAGTGGATCGTCACATCGCAATATAAGCCACATCTGGGATAAAGTATT 2017 | | |||| | ||||| | | |||| | || |||||||| || ||| || |||| | Sbjct 1356 TCATCTGAA-AGGAGTGAACCTTCACGTAAAAAAATAAGCCAAATTTGGAATGAAGTGCT 1414 Query 2018 GGGATCTCCCATGTTCCAGAATAAGCCATTATTACCTTATGAAGAATGGAACATAGACTT 2077 || |||||| |||||||||||||| || || ||||| |||||| ||||||||||| | || Sbjct 1415 GGAATCTCCAATGTTCCAGAATAATCCTTTGTTACCATATGAACAATGGAACATAAATTT 1474 Query 2078 CTCTGAGCTGACTGTTGGGACACGTGTCGGAATTGGATTTTTC-GGAGAAGTAT-TCCGT 2135 ||| || |||| |||||| | ||| || | |||| | ||| |||| ||||| | ||| Sbjct 1475 CTCCGATTTGACAGTTGGGGCTTTTGTTGGGAGTGGA-TCTTCTGGAGTAGTATGT-CGT 1532 Query 2136 GGGATCTGGAACGGGACAGACGTTGCTATCAAAG-TG-TTCCTT-GAGCAAGACCTTACA 2192 || |||||||| ||||| ||||| ||| ||| || || || || ||| | |||||| Sbjct 1533 GGCATCTGGAATAAAACAGAAGTTGCGATC-AAGATGCTT-TTTGGA-CAACAGCTTACA 1589 Query 2193 GCTGAGAACATGGAGGATTTCTGCAATGAGATATCAATTCTTAGCCGACTTAGACATCCC 2252 |||||||||||| | |||||||||||||||||||| ||||||||||| ||| |||||||| Sbjct 1590 GCTGAGAACATGAAAGATTTCTGCAATGAGATATCTATTCTTAGCCGTCTTCGACATCCC 1649 Query 2253 AATGTTATACTGTTCCTTGGAGCATGCACAAAGCCTCCAC-GATTATCACTGATCACTGA 2311 |||||||| ||||||||||||||||||||||||||||| | | |||||| ||||||| || Sbjct 1650 AATGTTATTCTGTTCCTTGGAGCATGCACAAAGCCTCCTCAG-TTATCAATGATCACAGA 1708 Query 2312 GTACATGGAA-ATGGGATCTTTGTATTACT-TGCTCCACTTGAGTGGACaaaaaaaGAGG 2369 ||| ||| || | ||| || |||||| | | | |||| | | || ||||| | || Sbjct 1709 GTATATG-AATAGGGGGTCCTTGTATGA-TATCCTCCG-T--ACCAGA-AAAAAG-G-GG 1760 Query 2370 TTAAGCTGGCGGA-GGAAGCTAAAGATGCTGCGGGACATTTGCAGGGGATTGATGTGTAT 2428 ||||||||| | | |||| |||||||| || | ||||||||||| || |||||| | || Sbjct 1761 TTAAGCTGG-GAAAGGAAACTAAAGATTCTAAGTGACATTTGCAGAGGTTTGATGGGCAT 1819 Query 2429 ACACCGGATGGGGATAGTACACCGTGATATAAAGAGTGCAAACTGTCTTTTGAGCAACAA 2488 |||| |||||||||||| ||||||||| |||||||||||||||| || || | ||||| Sbjct 1820 TCACCAGATGGGGATAGTCCACCGTGATCTAAAGAGTGCAAACTGCCTGTT-A--AACAA 1876 Query 2489 ATGGACAGTCAAGATCTGTGATTTTGGGCTGTCGAGAATAATGACAGGG-ACAACAATGA 2547 ||| |||||||||||||||||||||||| |||||||| |||| | || || ||| || Sbjct 1877 GGGGATAGTCAAGATCTGTGATTTTGGGCTCTCGAGAATGATGA-ATGGCACGACAGTG- 1934 Query 2548 GA-GACACAGTCTCTGCAGGAACTCCAGAGTGGATGGCTCCTGAACTTATCCGCAATGAG 2606 || || || | ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1935 GAAGATACTGAAGCTGCAGGAACTCCCGAGTGGATGGCTCCTGAACTTATCCGCAATGAA 1994 Query 2607 CCCTTCTCAGAAAAGTGTGATATCTTCAG-TTTAGGTGTAATAATGTGGGAGCTATGCAC 2665 || || ||||||| ||||| ||||| || ||| ||||| |||||||||||||| ||||| Sbjct 1995 CCAGTCACAGAAAAATGTGACATCTTTAGCTTT-GGTGTTATAATGTGGGAGCTTTGCAC 2053 Query 2666 TTTAACCA-GACCTTGGGAAGGAGTACCGCCTGAACGGGTTGTT--TATGCTATTGCTTA 2722 | || ||| | ||| || ||||||| || ||| || || ||| | |||| | Sbjct 2054 TCTATCCAAGCCCT-GGAAAGGAGTCCCAAAAGAAAAAGTCATTCATAT-CG-TTGCAAA 2110 Query 2723 CGAGGGAGCTCGGCTTGAGATT-CCTGAAGGACCACTGGGAAAGCTTATTGCAGATTGTT 2781 || ||||| ||||| | ||| || ||||||||||| | |||||||||||||||||| Sbjct 2111 TGAAGGAGCCCGGCTC-ACATTACCCGAAGGACCACTACGCCAGCTTATTGCAGATTGTT 2169 Query 2782 GGACAGAACCGGAACAAAGACCGAGTTGCAATGAGATA 2819 || | ||||| || ||||| ||||| || || |||||| Sbjct 2170 GGTCGGAACCAGAGCAAAGGCCGAGCTGTAAAGAGATA 2207 > Ahg482025 jgi|Araly1|482025|fgenesh2_kg.4__1085__AT2G31010.1 Length=2721 Score = 579 bits (313), Expect = 6e-164 Identities = 697/878 (79%), Gaps = 44/878 (5%) Strand=Plus/Plus Query 2004 TGGGATAAAGT-ATTGGGATCTCCCATGTTCCAGAATAAGCCATTATTACCTTATGAAGA 2062 ||| ||||||| ||| | ||| ||| || |||||| |||| |||||||| ||| |||| Sbjct 1571 TGGAATAAAGTGGTTGAG-TCTTCCACATTGCAGAATCAGCCTTTATTACCCTATCAAGA 1629 Query 2063 ATGGAACATAGACTTCTCTGAGCTGACTGTTGGGACACGTGTCGGAATTGGATTTTTCGG 2122 |||| |||| |||||||| |||||||||||||| || || || || ||||| ||||| || Sbjct 1630 ATGGGACATTGACTTCTCAGAGCTGACTGTTGGAACTCGGGTGGGGATTGGGTTTTTTGG 1689 Query 2123 AGAAGTATTCCGTGGGA-TCTGGAACGGGACAGACGTTGCTATCAAAGTGTTCCTTGAGC 2181 ||||| || ||| ||| | ||||| |||||||| ||||| |||||| |||| || |||| Sbjct 1690 TGAAGTTTTTCGT-GGAGTATGGAATGGGACAGATGTTGCAATCAAATTGTTTCTGGAGC 1748 Query 2182 AAGACCTTACAGCTGAGAACATGGAGGATTTCTGCAATGAGATATCAATTCTTAGCCGAC 2241 |||| ||||| || || |||||||| |||||||||||||||||||||||||| ||||| Sbjct 1749 AAGATCTTACTGCCGAAAACATGGAAGATTTCTGCAATGAGATATCAATTCTCAGCCGTG 1808 Query 2242 TTAGACATCCC-AATGTTATACTGTTCCTTGGAGCATGCACAAAGCCTCCACGATTATC- 2299 || | || ||| |||||| || | |||||||| ||||||||||| |||||||| ||||| Sbjct 1809 TTCGCCA-CCCAAATGTTGTATTATTCCTTGGTGCATGCACAAAACCTCCACGCTTATCT 1867 Query 2300 ACTGATCACTGAGTACATGGAAATGGGATCTTTGTATTACTTGCTCCACTTGAGTGGACa 2359 | ||||||| || |||||||| |||||||||||||||| ||| ||||| ||||||| || Sbjct 1868 A-TGATCACGGAATACATGGAGCTGGGATCTTTGTATTATTTGATCCACATGAGTGGTCA 1926 Query 2360 aaaaaaG-AGGTTAAGCTGGCGGAGGAA-GCTAAAGATGCTGCGGGACATTTGCAGGGGA 2417 || ||| | || ||||||| | ||| ||| | |||||| | ||||| |||||||| Sbjct 1927 GAAGAAGAAACTT-AGCTGGCACA-GAAGGCTCAGGATGCTTAGAGACATCTGCAGGGGT 1984 Query 2418 TTGATGTGTATACACCGGATGGGGATAGTACACCGTGATATAAAGAGTGCAAACTGTCT- 2476 |||||||| |||||||||||| |||||| |||||||| |||| ||||| |||||||| Sbjct 1985 TTGATGTGCATACACCGGATGAAGATAGTCCACCGTGACCTAAAAAGTGCCAACTGTCTA 2044 Query 2477 TTTGAGC-AACAAATGGACAGTCAAGATCTGTGATTTTGGGCTGTCGAGAATAATGACAG 2535 | || | ||| | ||||||||||||||||||||||||||||| || ||||||||||| | Sbjct 2045 GTGGA-CAAAC-ATTGGACAGTCAAGATCTGTGATTTTGGGCTCTCAAGAATAATGACTG 2102 Query 2536 G-GACAACAATGAGAG-ACACAGTC-TCTGCAGGAACTCCAGAGTGGATGGCTCCTGAAC 2592 || |||| ||| || |||| || ||||| || || ||||||||||||||||| || | Sbjct 2103 ACGAAAACA-TGA-AGGACACT-TCATCTGCTGGTACACCAGAGTGGATGGCTCCAGAGC 2159 Query 2593 TTATCCGCAATGAGCCCTTCT-CAGAAAAGTGTGATATCTTCAGT-TTAGGTGTAATAAT 2650 | || ||||| |||| || | |||| |||||||||||||| ||| || || || ||||| Sbjct 2160 TCATTCGCAACAAGCCTTT-TACAGAGAAGTGTGATATCTTTAGTCTTGGG-GTCATAAT 2217 Query 2651 GTGGGAGCTATGCA-CTTTAACC-AGACCTTGGGAAGGAGTACCGCCTGA-ACGGGTTGT 2707 |||||| || | || ||||| | | ||| ||||||||||| || ||||| | || |||| Sbjct 2218 GTGGGAACTTT-CAACTTTA-CGTAAACCATGGGAAGGAGTTCCACCTGAGAAGG-TTGT 2274 Query 2708 -TTATGCTATTGCTTACGA-GGGAGCTCGGCTTG-AGATTCCTGAAGGACCACTGGG-AA 2763 || |||| |||| | || ||| | || ||| |||||||||| || ||||| | || Sbjct 2275 CTT-TGCTGTTGCGCATGAAGGGT-CACGT-TTGGAGATTCCTGATGGTCCACTCAGCAA 2331 Query 2764 AGCTTATTGCAGATTGTTGGACAGAACCGGAACAAAGACCGAGTTGC-AATGAGATACTC 2822 | || ||||||||||||||| |||| || ||| || | || | ||| || |||||||| Sbjct 2332 A-CTAATTGCAGATTGTTGGGCAGAGCCTGAAGAACGCCCAAATTGTGAA-GAGATACT- 2388 Query 2823 TCTCGT-TTGCTGGATTGTGAGTATTCGCTTTGCTAAC 2859 | | ||||| ||||||||||| | || ||||||| Sbjct 2389 TAGAGGCTTGCTCGATTGTGAGTACACACTGTGCTAAC 2426 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 123344594093 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5