BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G62740.1
Length=1509
Score E
Sequences producing significant alignments: (Bits) Value
Ahg939363 jgi|Araly1|939363|scaffold_503554.1 2250 0.0
Ahg486775 jgi|Araly1|486775|fgenesh2_kg.5__2767__AT3G62750.1 1722 0.0
Ahg491999 jgi|Araly1|491999|fgenesh2_kg.7__1432__AT4G27830.1 1670 0.0
Ahg486774 jgi|Araly1|486774|fgenesh2_kg.5__2766__AT4G27830.1 1363 0.0
> Ahg939363 jgi|Araly1|939363|scaffold_503554.1
Length=1555
Score = 2250 bits (1218), Expect = 0.0
Identities = 1416/1513 (94%), Gaps = 8/1513 (1%)
Strand=Plus/Plus
Query 1 ATGAAACCTTTCTCTCAATTTT-TCG-TAT-TTGTGGTTACCGTTTCCGCGACAAGCTAC 57
||||||||||| |||| |||| | | | | || |||| ||||||| || ||| |||||
Sbjct 21 ATGAAACCTTTGTCTCTGTTTTCTAGTTTTATTCTGGTCACCGTTTTGGCAACATGCTAC 80
Query 58 ATTGATGCCTTCACTAGAAACGATTTTCCAAATGATTTCCTCTTCGGAGCCGCCACTTCT 117
|||||||||||||| || |||||||||||| | ||||||||||||||||||||||| |||
Sbjct 81 ATTGATGCCTTCACCAGGAACGATTTTCCAGAGGATTTCCTCTTCGGAGCCGCCACCTCT 140
Query 118 GCTTACCAATGGGAAGGAGCTTTTGATGAAGACGGAAAATCTCCTAGCGTCTGGGATACA 177
|||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct 141 GCTTACCAGTGGGAAGGAGCCTTTGATGAAGACGGAAAAACTCCTAGCGTCTGGGATACA 200
Query 178 ACCTCCCACTGTGATAGTGGAAGTAATAATGGAGATATAGCATGTGATGGGTATCACAAA 237
|||||||||||||||| ||| || ||||||||||||||||| |||||||||||||||||
Sbjct 201 ACCTCCCACTGTGATAATGG-AG--ATAATGGAGATATAGCAAGTGATGGGTATCACAAA 257
Query 238 TACAAGGAAGATGTTATGTTGATGGCAGAAATGGGCTTAGAATCATTCAGATTCTCTATC 297
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 258 TACAAGGAAGATGTTAAGTTGATGGCAGAAATGGGCTTAGAATCATTCAGATTCTCTATC 317
Query 298 TCCTGGTCAAGACTTATACCTAATGGAAGAGGACGCATTAACCCAAAAGGTCTATTGTTT 357
|||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||
Sbjct 318 TCCTGGTCAAGACTTATACCTAATGGAAGAGGACCCATTAACCCCAAAGGTCTACTGTTT 377
Query 358 TACAAGAATCTCATCAAAGAGCTACGAAGCCATGGAATTGAACCACAGGTTACACTTTAC 417
|||||||| ||||||||||| |||||| |||||||||| |||||||| ||||||||||||
Sbjct 378 TACAAGAACCTCATCAAAGAACTACGAGGCCATGGAATCGAACCACACGTTACACTTTAC 437
Query 418 CATTATGATCTTCCTCAGTCTCTGGAAGATGAGTATGGAGGATGGATCAACCGCAAAATC 477
|| |||||||||||||||||||| ||||||||||| |||| ||||||||||| ||||||
Sbjct 438 CACTATGATCTTCCTCAGTCTCTTGAAGATGAGTACAGAGGCTGGATCAACCGAAAAATC 497
Query 478 ATAGAAGACTTCACTGCTTTTGCAGATGTATGCTTCAGAGAGTTTGGGGAGGATGTGAAG 537
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 498 ATAGAAGACTTCACTGCTTTTGCAGATGTATGCTTCAGAGAGTTTGGGGATGATGTGAAG 557
Query 538 TTATGGACTAAAATCAACGAAGCTACTTTATTCGCCATTGGTTCTTATGGCGACGGAATG 597
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 558 TTATGGACTACAATCAACGAAGCTACTTTATTCGCCATTGGTTCTTATGGCGACGGAATG 617
Query 598 AGGTATGGACATTGTCCTCCTATGAATTACTCTACCGCAAATGT-TTGTACGGAAACATA 656
||||||||||||||||||||||| ||||||||||||| |||| | |||||||||||||||
Sbjct 618 AGGTATGGACATTGTCCTCCTATCAATTACTCTACCGGAAAT-TCTTGTACGGAAACATA 676
Query 657 TATTGCAGGCCATAACATGTTGCTAGCTCACTCCTCTGCTTCAAATTTGTATAAACTGAA 716
||||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||
Sbjct 677 TATTGCAGGCCATAACATGTTGCTAGCTCACGCCTCTGCTTCAAATTTGTATAAGCTCAA 736
Query 717 GTACAAGACTAAGCAAAGAGGATCCGTAGGCCTTAGTATATATGCTTATGGGCTATCTCC 776
||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||| |||
Sbjct 737 GTACAAGACTAAGCAAAGAGGATCCGTGGGCCTTAGTATATATGCATATGGGTTATATCC 796
Query 777 TTATACGGACTCCAAGGACGATGAAACCGCAACTGAAAGAGCTGAAGCTTTCCTCTTTGG 836
|||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct 797 TTATACAAACTCCAAGGACGATGAAATCGCAACTCAAAGAGCTGAAGCTTTCCTCTTTGG 856
Query 837 CTGGATGTTAAAGCCTTTGGTAGTTGGGGATTATCCGGATATAATGAAGAGAACCTTGGG 896
||||||||| |||||||||||| ||||||| |||||||||||||||||||| ||||||||
Sbjct 857 CTGGATGTTGAAGCCTTTGGTATTTGGGGACTATCCGGATATAATGAAGAGGACCTTGGG 916
Query 897 GTCGAGATTACCGGTTTTCTCAGAAGAAGAGTCAAAACAAGTGAAAGGATCATCTGACTT 956
||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||
Sbjct 917 ATCGAGATTACCGGTTTTCTCAGAGGAAGAGTCAGAGCAAGTGAAAGGATCATCTGACTT 976
Query 957 TGTAGGAGTTGTACACTACAACACATTCTATGTCACAAACCGACCCGCACCTTCTCTCGT 1016
|||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 977 TGTAGGAGTTATTCACTACAACACATTCTATGTCACAAACCGACCTGCACCTTCTCTCGT 1036
Query 1017 TACCAGCATTAACAAACTCTTCTTTGCAGACATTGGCGCATATCTGATCGCCGCTGGGAA 1076
||||||||||||| ||||||||||| ||||||||||||||| |||||| ||| |||||||
Sbjct 1037 TACCAGCATTAACGAACTCTTCTTTACAGACATTGGCGCATCTCTGATAGCCACTGGGAA 1096
Query 1077 TGCTTCATTATTCGAGTTTGATGCTGTTCCATGGGGTCTGGAAGGTATTCTTCAGCATAT 1136
||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||| |
Sbjct 1097 TGCTTCACTATTCGAGTTTGATGCTATTCCATGGGGTCTGGAAGGTATTCTGGAGCATCT 1156
Query 1137 AAAGCAGAGCTATAACAATCCTCCAATCTACATTCTTGAAAATGGTAAACCGATGAAACA 1196
|||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 1157 AAAGCAGAGCTATAACAATCCTCCAATCTACATTCTTGAAAACGGTAAGCCGATGAAACA 1216
Query 1197 TGGTTCAACGCTACAAGACACACCAAGAGCTGAATTCATTCAAGCTTACATTGGTGCTGT 1256
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1217 TGGTTCAACGCTACAAGACACACCAAGAGTTGAATTCATTCAAGCTTACATTGGTGCTGT 1276
Query 1257 GCACAACGCCATCACGAATGGATCGGACACGAGAGGTTACTTTGTATGGTCGATGATTGA 1316
|| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1277 GCTCAACGCCATCAAGAATGGATCGGACACGAGAGGTTACTTTGTATGGTCGATGGTTGA 1336
Query 1317 TTTGTATGAGTTAATAGGTAGATATATGACCAGCTATGGAATGTACTATGTGAATTTCAG 1376
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1337 TTTGTATGAGTTAATAGGTGGATATATGACCAGCTATGGAATGTACTATGTGAATTTCAG 1396
Query 1377 TGATCCTGGTCGCAAGAGGTCTCCAAAGCTCTCTGCTTCTTGGTACACTGGTTTCCTCAA 1436
||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct 1397 CGATCCCGGTCGCAAGAGGTCTCCAAAGCTCTCTGCTTCTTGGTACTCTGGTTTTCTCAA 1456
Query 1437 TGGTACTATTGATGTTGCTTCTCAAGATACTATTCAGTTGCAGAGAAAATGCTCAGGCTC 1496
|||||| ||||||||||||||||||||||||||||||||||||| ||||| ||| |||||
Sbjct 1457 TGGTACAATTGATGTTGCTTCTCAAGATACTATTCAGTTGCAGACAAAATTCTCTGGCTC 1516
Query 1497 TTCGTCCTTGTAA 1509
||| || ||||||
Sbjct 1517 TTCTTCGTTGTAA 1529
> Ahg486775 jgi|Araly1|486775|fgenesh2_kg.5__2767__AT3G62750.1
Length=1641
Score = 1722 bits (932), Expect = 0.0
Identities = 1322/1506 (88%), Gaps = 44/1506 (3%)
Strand=Plus/Plus
Query 1 ATGAAACCTTTCTCTCAATTTTTC-GTATTTGTGGTTACCGTTTCCGCGACAAGCTACAT 59
||||||| ||||| || |||| | || || ||| || ||||| | ||||||||||||
Sbjct 5 ATGAAACATTTCTATCTGTTTTCCATTA-TTCTGGCTATCGTTTTGGTGACAAGCTACAT 63
Query 60 TGATGCCTTCACTAGAAACGATTTTCCAAATGATTTCCTCTTCGGAGCCGCCACTTCTGC 119
|||||||||||| |||| |||||||||| | |||||||||||||||||||| ||||||||
Sbjct 64 TGATGCCTTCACCAGAACCGATTTTCCAGAGGATTTCCTCTTCGGAGCCGCTACTTCTGC 123
Query 120 TTACCAATGGGAAGGAGCTTTTGATGAAGACGGAA-AATCTCCTAGCGTCTGGGATACAA 178
||| || |||||||| ||| ||||||||||||||| || |||||||||||||||||||||
Sbjct 124 TTATCAGTGGGAAGGTGCTGTTGATGAAGACGGAAGAA-CTCCTAGCGTCTGGGATACAA 182
Query 179 CCTCCCACTGTGATAGTGGAAGTAATAATGGAGATATAGCATGTGATGGGTATCACAAAT 238
|||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct 183 GCTCCCACTGTCATAATGGAAG---TAATGGAGATATAGCATGTGATGGGTATCACAAAT 239
Query 239 ACAAGGAAGATGTTATGTTGATGGCAGAA-ATGGGCTTAGAATCATTCAGATTCTCTATC 297
||||||||||||||| | ||||||| || |||||||||||| ||||||||||||| |||
Sbjct 240 ACAAGGAAGATGTTAAGCTGATGGC-TAATATGGGCTTAGAAGCATTCAGATTCTCCATC 298
Query 298 TCCTGGTCAAGACTTATACCTAATGGAAGAGGACGCATTAACCCAAAAGGTCTATTGTTT 357
|| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 299 TCTTGGACAAGACTTATACCTAATGGAAGAGGACCCATTAACCCAAAAGGTCTATTGTTT 358
Query 358 TACAAGAATCTCATCAAAGAGCTACGAAGCCATGGAATTGAACCACAGGTTACACTTTAC 417
|||||||| ||||| ||||| ||||||||||||||||| ||||| || ||||||||||||
Sbjct 359 TACAAGAACCTCATTAAAGAACTACGAAGCCATGGAATCGAACCTCACGTTACACTTTAC 418
Query 418 CATTATGATCTTCCTCAGTCTCTGGAAGATGAGTATGGAGGATGGATCAACCGCAAAATC 477
|| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 419 CACTACGATCTTCCTCAGTCTCTTGAAGATGAGTATGGAGGATGGATCAACCGCAAAATA 478
Query 478 ATAGAAGACTTCACTGCTTTTGCAGATGTATGCTTCAGAGAGTTTGGGGAGGATGTGAAG 537
|||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct 479 ATAGAAGACTTCACTGGTTTTGCAGATGTATGCTTCAGAGAGTTTGGGGACGATGTGAAG 538
Query 538 TTATGGACTAAAATCAACGAAGCTACTTTATTCGCCATTGGTTCTTATGGCGACGGAATG 597
|||||||||| ||||||||||||||| |||||||| ||| || ||||||||| |||||
Sbjct 539 TTATGGACTACAATCAACGAAGCTACAATATTCGCCTTTGCTTTTTATGGCGAAGGAATA 598
Query 598 AGGTATGGACATTG---TCCT-CC---T--ATGAATTACTCTACCGCAAATGT-TTGTAC 647
| || ||||||||| |||| || | || |||| |||||||| |||| | |||||
Sbjct 599 AAGTTTGGACATTGTTCTCCTACCAAATACATCAATTGCTCTACCGGAAAT-TCTTGTAT 657
Query 648 GGAAACATATATTGCAGGCCATAACATGTTGCTAGCTCACT-CCTCTGCTTCAAATTTGT 706
||||||||||||||||||||||||||||||||||||||| | ||||||| |||| |||||
Sbjct 658 GGAAACATATATTGCAGGCCATAACATGTTGCTAGCTCA-TGCCTCTGCCTCAAGTTTGT 716
Query 707 ATAAACTGAAGTACAAGACTAAGCAAAGAGGATCCGTAGGCCTTAGTATATATGC-TTAT 765
||||||| |||||||||| ||||||| |||||||| ||||||||||||||| ||| ||
Sbjct 717 ATAAACTAAAGTACAAGAGTAAGCAAGGAGGATCCATAGGCCTTAGTATATTTGCATT-G 775
Query 766 GGGCTATCTCCTTATACGGACTCCAAGGACGATGAAACCGCAACTGAAAGAGCTGAAGCT 825
||| ||||||||||||| |||||||||||||||||| |||||||||||||||| |||||
Sbjct 776 GGGTTATCTCCTTATACAAACTCCAAGGACGATGAAATCGCAACTGAAAGAGCTAAAGCT 835
Query 826 TTCCTCTTTGGCTGGATGTTAAAGCCTTTGGTAGT-TGGGGATTATCCGGAT-ATAATGA 883
|||||||||||||||||||| |||||||||||| | |||||| ||||||||| | |||||
Sbjct 836 TTCCTCTTTGGCTGGATGTTGAAGCCTTTGGTA-TATGGGGACTATCCGGATGA-AATGA 893
Query 884 AGAGAACCTTGGGGTCGAGATTACCGGTTTTCTCAGAAGAAGAGTCAAAACAAGTGAAAG 943
| |||| |||||| ||||||||||||||||||||||| |||||||| | ||||||||||
Sbjct 894 AAAGAATCTTGGGATCGAGATTACCGGTTTTCTCAGAGGAAGAGTCGGAGCAAGTGAAAG 953
Query 944 GATCATCTGACTTTGTAGGAGTTGTACACTACAAC-ACATTCTATGTCACAAACCGACCC 1002
| |||||||||||||||||| || | |||||| || ||| ||||||||||||||||||||
Sbjct 954 GGTCATCTGACTTTGTAGGAATTATTCACTAC-ACGACAGTCTATGTCACAAACCGACCC 1012
Query 1003 GCACCTTCTCTCGTTACC---AGCATTAACAAACTCTTCTTTGCAGACATTGGCGCATAT 1059
||||||| | | || || |||| ||||||| ||||||| ||||||| ||||| |||
Sbjct 1013 GCACCTTATATATTTCCCAGTAGCACTAACAAAGGCTTCTTTACAGACATGGGCGCGTAT 1072
Query 1060 CTGATCGCCGCTGGGAATGCTTCATTATTCGAGTTTGATGCTGTTCCATGGGGTCTGGAA 1119
| || ||||||||||| |||||| ||||||||||||||| ||||||||||||||||
Sbjct 1073 ATTATTTCCGCTGGGAATTCTTCATCATTCGAGTTTGATGCCACTCCATGGGGTCTGGAA 1132
Query 1120 GGTATTCTTCAGCATATAAAGCAGAGCTATAACAATCCTCCAATCTACATTCTTGAAAAT 1179
||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1133 GGTATTCTTGAGCATCTAAAGCAAAGCTATAACAATCCTCCAATCTACATTCTTGAAAAT 1192
Query 1180 GGTAAACCGATGAAACATGGTTCAACGCTACAAGACACACCAAGAGCTGAATTCATTCAA 1239
|||| |||||||||||| | ||| | |||||||||||||||||||| ||||| |||||||
Sbjct 1193 GGTACACCGATGAAACACGATTCGATGCTACAAGACACACCAAGAGTTGAATACATTCAA 1252
Query 1240 GCTTACATTGGTGCTGTGCACAACGCCATCACGAATGGATCGGACACGAGAGGTTACTTT 1299
|||||||||||||| |||| ||||||||||| |||||||||||||| ||||||||||||
Sbjct 1253 GCTTACATTGGTGCAGTGCTCAACGCCATCAAGAATGGATCGGACATGAGAGGTTACTTC 1312
Query 1300 GTATGGTCGATGATTGATTTGTATGAGTTAATAGGTAGAT-ATATGACCAGCTAT-GGAA 1357
||||||||| |||| |||||||||||| ||| ||| | | ||| ||||||| | ||||
Sbjct 1313 GTATGGTCGCTGATAGATTTGTATGAGATAAC-GGTTGGTTATACAACCAGCT-TCGGAA 1370
Query 1358 TGTACTATGTGAATTTCAGTGATCCTGGTCGCAAGAGGTCTCC-AAAGCTCTCTGCTTCT 1416
|||||||||| |||||||| |||||||||||||||||||| || ||| |||||||||| |
Sbjct 1371 TGTACTATGTAAATTTCAGCGATCCTGGTCGCAAGAGGTCGCCGAAA-CTCTCTGCTTTT 1429
Query 1417 TGGTACACTGGTTTCCTCAATGGTACTATTGATGTTGCTTCTCAAGATACTATTCAG-TT 1475
|||||| | ||||| ||||| ||||| |||||||||||| |||||| || |||| ||
Sbjct 1430 TGGTACTCAGGTTTTCTCAAAGGTACAATTGATGTTGCTA---AAGATATTACTCAGCTT 1486
Query 1476 GCAGAG 1481
|||||
Sbjct 1487 -CAGAG 1491
> Ahg491999 jgi|Araly1|491999|fgenesh2_kg.7__1432__AT4G27830.1
Length=1573
Score = 1670 bits (904), Expect = 0.0
Identities = 1331/1534 (87%), Gaps = 41/1534 (3%)
Strand=Plus/Plus
Query 1 ATGAAACCTTTCTCTCAATTTTTCGTATTTG-TGGTTA-CCGT-TTCCGCGACAAGCTAC 57
||||||| |||||||| | ||||| | |||| |||| | || | || || |||||||||
Sbjct 12 ATGAAACATTTCTCTCTACTTTTCAT-TTTGCTGGTCATCC-TCTT-GGCAACAAGCTAC 68
Query 58 ATTGATGCCTTCACTAGAAACGATTTTCCAAATGATTTCCTCTTCGGAGCCGCCACTTCT 117
| ||||||||| || |||||| |||||||||| |||||||||||||||||||||||||||
Sbjct 69 AGTGATGCCTTTACCAGAAACAATTTTCCAAAGGATTTCCTCTTCGGAGCCGCCACTTCT 128
Query 118 GCTTACCAATGGGAAGGAGCTTTTGATGAAGACGGAA-AATCTCCTAGCGTCTGGGATAC 176
||||| || |||||||||||| ||||||||||||||| || |||||||||||||||||||
Sbjct 129 GCTTATCAGTGGGAAGGAGCTGTTGATGAAGACGGAAGAA-CTCCTAGCGTCTGGGATAC 187
Query 177 AACCTCCCACTGTGATAGTGGAAGTAATAATGGAGATATAGCATGTGATGGGTATCACAA 236
||| |||| | | | | | || ||||||||||||| ||| ||||||||||||||
Sbjct 188 TTTCTCACACTCTTACAATAG-AG--GTAATGGAGATATAACATCAGATGGGTATCACAA 244
Query 237 ATACAAGGAAGATGTTATGTTGATGGCAGAAATGGGCTTAGAATCATTCAGATTCTCTAT 296
||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct 245 ATACAAGGAAGATGTTAAGCTGATGGCAGAAATGGGCTTAGAATCATTCAGATTCTCTAT 304
Query 297 CTCCTGGTCAAGACTTATACCTAATGGAAGAGGACGCATTAACCCAAAAGGTCTATTGTT 356
||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||
Sbjct 305 CTCCTGGTCAAGACTAATACCTAATGGAAGAGGACTCGTTAACCCAAAAGGTCTATTGTT 364
Query 357 TTACAAGAATCTCATCAAAGAGCTACGAAGCCATGGAATTGAACCACAGGTTACACTTTA 416
||||||||| ||||||||||| ||| || ||||||||| ||||||| |||||||||||
Sbjct 365 TTACAAGAACCTCATCAAAGAACTAAAAACCCATGGAATCAAACCACACGTTACACTTTA 424
Query 417 CCATTATGATCTTCCTCAGTCTCTGGAAGATGAGTATGGAGGATGGATCAACCGCAAAAT 476
||| |||||||||||||||| ||| ||||| ||||| |||||||||||||||||||||||
Sbjct 425 CCACTATGATCTTCCTCAGTGTCTTGAAGACGAGTACGGAGGATGGATCAACCGCAAAAT 484
Query 477 CATAGAAGACTTCACTGCTTTTGCAGATGTATGCTTCAGAGAGTTTGGGGAGGATGTGAA 536
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 485 CATAGAAGACTTCACTGCTTTTGCAGATGCATGCTTCAGAGAGTTTGGGGAGGATGTGAA 544
Query 537 GTTATGGACTAAAATCAACGAAGCTAC-TTTATTCGCCATTGGTTCTTATGGCGACGGAA 595
||||||||||| || ||||||||||| || ||||||||||||||||||| | | ||||
Sbjct 545 GTTATGGACTACCATAAACGAAGCTACAATT-TTCGCCATTGGTTCTTATGACCAAGGAA 603
Query 596 --T-GAGGTATGGACATTGTCCTCCT-ATGAATT-A-C-----T-CTACCGCAAATGT-T 642
| | | |||||||||| ||||| | |||| | | | |||| | |||| | |
Sbjct 604 TCTCGCCGCCTGGACATTGTTCTCCTAACAAATTCATCAATTGTACTACTGGAAAT-TCT 662
Query 643 TGTACGGAAACATATATTGCAGGCCATAACATGTTGCTAGCTCACT-CCTCTGCTTCAAA 701
| ||| ||| ||||| |||||||||||||||| ||||||||||| | |||||||||||||
Sbjct 663 TCTACAGAACCATATCTTGCAGGCCATAACATATTGCTAGCTCA-TGCCTCTGCTTCAAA 721
Query 702 TTTGTATAAACTGAAGTACAAGACTAAGCAAAGAGGATCCGTAGGCCTTAGTATATATGC 761
||||||||||| |||||||||| |||||| ||||||||| |||| |||||||||| |||
Sbjct 722 ATTGTATAAACTAAAGTACAAGAGTAAGCAGAGAGGATCCTTAGGGCTTAGTATATTTGC 781
Query 762 -TTATGGGCTATCTCCTTATACGGACTCCAAGGACGATGAAACCGCAACTGAAAGAGCTG 820
|| ||| ||||||| ||||| |||||||||||||||||| ||||||| ||||||||
Sbjct 782 ATT-CGGGTTATCTCCCTATACAAACTCCAAGGACGATGAAATCGCAACTCAAAGAGCTA 840
Query 821 AAGCTTTCCTCTTTGGCTGGATGTTAAAGCCTTTGGTAGTTGGGGATTATCCGGAT-ATA 879
|||||||| ||| |||||||||||| |||||||||||| |||| || ||||||||| | |
Sbjct 841 AAGCTTTCTTCTATGGCTGGATGTTGAAGCCTTTGGTATTTGGAGACTATCCGGATGA-A 899
Query 880 ATGAAGAGAACCTTGGGGTCGAGATTACCGGTTTTCTCAGAAGAAGAGTCAAAACAAGTG 939
||||||||||||||||| |||||||||||||| |||||||| ||||||||| | |||||
Sbjct 900 ATGAAGAGAACCTTGGGATCGAGATTACCGGTGTTCTCAGAGGAAGAGTCAGAGCAAGTT 959
Query 940 AAAGGATCATCTGACTTTGTAGGAGTTGTACACTACAAC-ACATTCTATGTCACAAACCG 998
|||||||||| ||||||| ||||| || | |||||| || ||||| |||||||||||||
Sbjct 960 AAAGGATCATATGACTTTATAGGAATTATTCACTAC-ACAACATTATATGTCACAAACCA 1018
Query 999 ACCCGCACCTTCTCTCGTTACCAGCATTAACAAACTCTTCTTTGCAGACATTGGCGCATA 1058
|||| ||| |||| || || ||||||| | || ||||| | |||||| || | |||
Sbjct 1019 ACCCTCACGTTCTATCTTTCCCAGCATGAGTGAAGGCTTCTATAAAGACATGGGAGTATA 1078
Query 1059 TCTGATCGCCGCTGGGAATGCTTCA-TTATTCGAGTTTGATGCTGTTCCATGGGGTCTGG 1117
| |||| ||||||||||| ||||| || || | || || ||| |||||||||||| |
Sbjct 1079 TATGATTTCCGCTGGGAATTCTTCATTTCTT-GCGTGGGAGGCTACTCCATGGGGTCTTG 1137
Query 1118 AAGGTATTCTTCAGCATATAAAGCAGAGCTATAACAATCCTCCAATCTACATTCTTGAAA 1177
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1138 AAGGTATTCTTGAGTATATAAAGCAGAGCTATAACAATCCTCCAATCTACATTCTTGAAA 1197
Query 1178 ATGGTAAACCGATGAAACATGGTTCAACGCTACAAGACACACCAAGAGCTGAATTCATTC 1237
|||||| |||||| ||| | ||| || ||||||||||||| |||| |||||||||||
Sbjct 1198 ATGGTATGCCGATGGAACGCGTTTCGACACTACAAGACACACAAAGAATTGAATTCATTC 1257
Query 1238 AAGCTTACATTGGTGCTGTGCACAACGCCATCACGAATGGATCGGACACGAGAGGTTACT 1297
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 1258 AAGCTTACATTGGTGCTGTGCTCAACGCCATCAAGAATGGATCGGACACGAGAGGTTACT 1317
Query 1298 TTGTATGGTCGATGATTGATTTGTATGAGTTAAT-AGGTAGATATATGACCAGCTAT-GG 1355
|||||||||||||||||||||||||||| ||| | | | |||||| |||||||| | ||
Sbjct 1318 TTGTATGGTCGATGATTGATTTGTATGAATTATTGAC-TGGATATACGACCAGCT-TCGG 1375
Query 1356 AATGTACTATGTGAATTTCAGTGATCCTGGTCGCAAGAGGTCTCCAAAGCTCTCTGCTTC 1415
||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct 1376 AATGTACTATGTGAATTTCAGCGATCCTGGTCGCAAGAGGACTCCAAAGCTCTCTGCTTC 1435
Query 1416 TTGGTACACTGGTTTCCTCAATGGTACTATTGATGTTGCTTCTCAAGATACTATTCAGTT 1475
||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct 1436 TTGGTACACTGGTTTTCTCAATGGTACAATTGATGTTTCTTCTCAAGATACTATTCAGTT 1495
Query 1476 GCAGAGAAAATGCTCAGGCTCTTCGTCCTTGTAA 1509
|||||| || | ||| |||||||| || ||||||
Sbjct 1496 GCAGAGCAACTTCTCTGGCTCTTCTTCATTGTAA 1529
> Ahg486774 jgi|Araly1|486774|fgenesh2_kg.5__2766__AT4G27830.1
Length=1279
Score = 1363 bits (738), Expect = 0.0
Identities = 1114/1292 (86%), Gaps = 40/1292 (3%)
Strand=Plus/Plus
Query 244 GAAGATGTTATG-TTGATGGCAGAAATGGGCTTAGAATCATTCAGATTCTCTATCTCCTG 302
|||||||||| | || ||||| || ||||||||| || ||||||||||||| ||||||||
Sbjct 1 GAAGATGTTAAGCTT-ATGGCTGATATGGGCTTACAAGCATTCAGATTCTCCATCTCCTG 59
Query 303 GTCAAGACTTATACCTAATGGAAGAGGACGCATTAACCCAAAAGGTCTATTGTTTTACAA 362
| ||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||
Sbjct 60 GACAAGACTTATACCTAATGGAAGAGGCCCCATTAACCCAAAAGGTCTACTGTTTTACAA 119
Query 363 GAATCTCATCAAAGAGCTACGAAGCCATGGAATTGAACCACAGGTTACACTTTACCATTA 422
||| ||||||||||| |||||| |||||||||| |||||||| |||||||||||||| ||
Sbjct 120 GAACCTCATCAAAGAACTACGAGGCCATGGAATCGAACCACACGTTACACTTTACCACTA 179
Query 423 TGATCTTCCTCAGTCTCTGGAAGATGAGTATGGAGGATGGATCAACCGCAAAATCATAGA 482
|||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||
Sbjct 180 TGATCTTCCTCAGTCTCTAGAAGATGAGTACGGAGGATGGATCAACCGAAAAATCATAGA 239
Query 483 AGACTTCACTGCTTTTGCAGATGTATGCTTCAGAGAGTTTGGGGAGGATGTGAAGTTATG 542
|||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 240 AGACTTTACTGCTTTTGCAGATGTCTGCTTCAGAGAGTTTGGGGATGATGTGAAGTTATG 299
Query 543 GACTAAAATCAACGAAGCTACTTTATTCGCCATTGGTTCTTATGGCGACGGAAT-GAG-- 599
||||| ||||||||||||||| |||| ||||||| |||||||||||| ||| | | |
Sbjct 300 GACTACAATCAACGAAGCTACAATATTTGCCATTGCTTCTTATGGCGAAGGAGTCGTGCC 359
Query 600 GTATGGACA-T-T-GT-CC-TC---CT-ATGAATTACTCTACCGCAAATGT-TTGTACGG 649
| |||||| | | || || | | || |||| |||||| | |||| | || ||| |
Sbjct 360 GCCTGGACATTGTAGTCCCAACAAATTCATCAATTGCTCTACTGGAAAT-TCTTCTACAG 418
Query 650 AAACATATATTGCAGGCCATAACATGTTGCTAGCTCACT-CCTCTGCTTCAAATTTGTAT 708
|| ||||| ||||||| |||||||||||||||||||| | ||||||||||||| ||||||
Sbjct 419 AACCATATCTTGCAGGGCATAACATGTTGCTAGCTCA-TGCCTCTGCTTCAAAATTGTAT 477
Query 709 AAACTGAAGTACAAGAC-TAAGCAAAGAGGATCCGTAGGCCTTAGTATATATGCTTATGG 767
||||| ||||||||| | || ||| ||||||||| ||||||||||||||| ||| | | |
Sbjct 478 AAACTAAAGTACAAG-CGTATGCAGAGAGGATCCATAGGCCTTAGTATATTTGCAT-TCG 535
Query 768 GC-TATCTCCTTATACGGACTCCAAGGACGATGAAACCGCAACTGAAAGAGCTGAAGCTT 826
|| |||||||||| || |||||||||||||||||| ||||||| |||||||| ||||||
Sbjct 536 GCTTATCTCCTTACACAAACTCCAAGGACGATGAAATCGCAACTCAAAGAGCTAAAGCTT 595
Query 827 TCCTCTTTGGCTGGATGTTAAAGCCTTTGGTAGTT-GGGGATTATCCGGAT-ATAATGAA 884
|||||| ||| |||||||| |||||||||||| || ||||| ||||||||| | ||||||
Sbjct 596 TCCTCTATGGATGGATGTTGAAGCCTTTGGTA-TTCGGGGACTATCCGGATGA-AATGAA 653
Query 885 GAGAACCTTGGGGTCGAGATTACCGGTTTTCTCAGAAGAAGAGTCAAAACAAGTGAAAGG 944
||||||||||| |||||||||||||||||||| || ||||||||| | ||||| |||||
Sbjct 654 AAGAACCTTGGGATCGAGATTACCGGTTTTCTCGGAGGAAGAGTCAGAGCAAGTTAAAGG 713
Query 945 ATCATCTGACTTTGTAGGAGTTGTACACTACAAC-ACATTCTATGTCACAAACCGACCCG 1003
||||||||||||||||||| || | |||||| || ||||| ||||||||||| ||| ||
Sbjct 714 ATCATCTGACTTTGTAGGAATTATTCACTAC-ACAACATTTTATGTCACAAATCGAGCCT 772
Query 1004 CACCTTCTCTCGTTACCAGCATTAACAAACTCTTCTTTGCAGACATTGGCGCATATCTGA 1063
|| |||| || || ||| ||| ||| || ||||||| |||||| |||| |||| |||
Sbjct 773 CAGCTTCAATCTTTCCCATCATGAACCAAGGCTTCTTTAAAGACATGGGCGTATATATGA 832
Query 1064 TCGCCGCTGGGAATGCTTCATTATTCGA-GT-T-TGATGCTGTTCCATGGGGTCTGGAAG 1120
| | ||||||||| ||||| | ||| | || | || ||| |||||||||||| ||||
Sbjct 833 TTTCTGCTGGGAATTCTTCA-T-TTC-ATGTGTGGGAGGCTACTCCATGGGGTCTTGAAG 889
Query 1121 GTATTCTTCAGCATATAAAGCAGAGCTATAACAATCCTCCAATCTACATTCTTGAAAATG 1180
|| ||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 890 GTGTTCTTGAGCATCTAAAGCAAAGCTATAACAATCCTCCAATCTACATTCTTGAAAATG 949
Query 1181 GTAAACCGATGAAACATGGTTCAACGCTACAAGACACACCAAGAGCTGAATTCATTCAAG 1240
|||| |||||| ||| | ||| | ||||||||||| |||||||| ||||| ||||||||
Sbjct 950 GTAAGCCGATGGAACGCGTTTCGATGCTACAAGACATACCAAGAGTTGAATACATTCAAG 1009
Query 1241 -CTTACATTGGTGCTGTGCACAACGCCATCACGAATGGATCGGACACGAGAGGTTACTTT 1299
|| ||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||
Sbjct 1010 GCT-ACATTGGTGCTGTGCTCAACGCCATCAAGAATGGATCGGACACGAGAAGTTACTTC 1068
Query 1300 GTATGGTCGATGATTGATTTGTATGAGTTAAT-AGGTAGATATATGACCAGCTAT-GGAA 1357
|||||||||||||||||| ||||||||||| | || | |||||| |||||||| | ||||
Sbjct 1069 GTATGGTCGATGATTGATGTGTATGAGTTATTGAG-TGGATATACGACCAGCT-TCGGAA 1126
Query 1358 TGTACTATGTGAATTTCAGTGATCCTGGTCGCAAGAGGTCTCCAAAGCTCTCTGCTTCTT 1417
|||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct 1127 TGTATTATGTGAATTTCAGCGATCCTGGTCGCAAGAGGTCTCCAAAACTCTCTGCTTCTT 1186
Query 1418 GGTACACTGGTTTCCTCAATGGTACTATTGATGTTGCTTCTCAAGATACTATTCAGTTGC 1477
|||| ||||||| ||||||||||| |||||||||| ||||||||||| || ||||||||
Sbjct 1187 GGTATTCTGGTTTTCTCAATGGTACAATTGATGTTGTTTCTCAAGATAGTACTCAGTTGC 1246
Query 1478 AGAGAAAATGCTCAGGCTCTTCGTCCTTGTAA 1509
|||| || | ||| | |||||| || ||||||
Sbjct 1247 AGAGCAACTTCTCTGCCTCTTCTTCATTGTAA 1278
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 56487833335
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5