BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G02420.1
Length=2010
Score E
Sequences producing significant alignments: (Bits) Value
Ahg490325 jgi|Araly1|490325|fgenesh2_kg.6__3459__AT4G02420.1 2782 0.0
Ahg943489 jgi|Araly1|943489|scaffold_604033.1 2265 0.0
Ahg490326 jgi|Araly1|490326|fgenesh2_kg.6__3460__AT4G02410.1 1997 0.0
> Ahg490325 jgi|Araly1|490325|fgenesh2_kg.6__3459__AT4G02420.1
Length=2007
Score = 2782 bits (1506), Expect = 0.0
Identities = 1845/2011 (92%), Gaps = 14/2011 (1%)
Strand=Plus/Plus
Query 7 TTCATCAAGCTCTTCACCATCTTCTTCTTAAGCTTCTTTTGGCAATCCCTAAAGTCCTCT 66
||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct 4 TTCTTCAAGCTCTTCACCATCTTCTTCTTAAGCTTCTTCTGGCAATCCATAAAGTCCTCT 63
Query 67 TCCCAAATTATCGACTTCACTTACAATGGCTTCCGTCCTCCACCGAC-AGACATATCCAT 125
||| ||||| |||||||| |||| |||||||||| ||||||| ||| | || ||||| |
Sbjct 64 TCCAAAATTCTCGACTTCGCTTATAATGGCTTCCACCCTCCACTGACTA-ACGTATCCGT 122
Query 126 CCTAGGAATTGCCACCATCACACCAAACGGTCTCTTAAAGCTAACCAACACAACCATGCA 185
|| |||||||||||| |||||||| || |||||||| |||||||| ||||||||||||||
Sbjct 123 CCAAGGAATTGCCACTATCACACCTAATGGTCTCTTGAAGCTAACTAACACAACCATGCA 182
Query 186 GAGCACCGGTCACGCCTTCTATACCAAACCAATCCGGTTCAAAGATTCTCCAAACGGTAC 245
||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct 183 GAGTACCGGTCACGCCTTCTTTACCAAAGCAATCCGGTTCAAAGATTCTCCAAACGGTAC 242
Query 246 CGTATCGTCTTTCTCCACTACCTTTGTCTTCGCTATTCACTCTCAGATACCCATTGCACA 305
||| |||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct 243 CGTCTCGTCTTTTTCCACTACCTTTGTCTTCGCTATTCACACTCAGATCCCCATTGCACA 302
Query 306 CGGCATGGCCTTTGTCATCGCTCCTAACCCTCGCCTCCCATTCGGCAGCCCCTTACAATA 365
|||||||||||||||| || ||||||||||| |||||||||||| |||||||||||||||
Sbjct 303 CGGCATGGCCTTTGTCGTCACTCCTAACCCTGGCCTCCCATTCGCCAGCCCCTTACAATA 362
Query 366 CCTCGGTCTCTTCAATGTAACAAACAACGGTAACGTTAGGAACCATGTATTCGCTGTCGA 425
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 363 CCTCGGTCTCTTCAATGTAACAAACAACGGTAACGATAGGAACCATGTATTCGCTGTCG- 421
Query 426 ACTT-GACACGATTATGAATATCGAGTTCAATGATACGAACAATAACCATGTTGGAATCG 484
| || |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 422 AGTTAGACACGATTATGAATATCGAGTTCAATGATACTAACAATAACCATGTTGGTATCG 481
Query 485 ATATCAATAGCTTGAACTCGGTGAAAAGTTCTCCTGCTGGGTACTGGGACGAGAACGATC 544
||||||| ||||||||||||||| |||||||||||||||| |||||||||||||| ||||
Sbjct 482 ATATCAACAGCTTGAACTCGGTGGAAAGTTCTCCTGCTGGATACTGGGACGAGAAAGATC 541
Query 545 AGTTTCACAATCTGACTTTGATCAGT-AGTAAACGGATGCAGGTTTGGGTCGATTTCGAT 603
||||| | |||||||||||||||||| | |||||| |||||||||||| |||||| ||||
Sbjct 542 AGTTTAATAATCTGACTTTGATCAGTCA-TAAACGTATGCAGGTTTGGATCGATTACGAT 600
Query 604 GGTCCCACCCATCTAATCGATGTAACCATGGCTCCGTTTGGTGAGGTTAAACCTAGGAAA 663
|||| | ||||| ||||||||| || |||||||| || || ||| ||||||||| |||
Sbjct 601 GGTCATAGCCATCGAATCGATGTGACGATGGCTCCCTTCGGCGAGAATAAACCTAGAAAA 660
Query 664 CCGCTTGTTTCTATCGTCAGAGATCTGTCCTCTGTTCTTTTGCAAGATATGTTCGTAGGT 723
|||||||||||||||||||||||||| || || |||||||||||||||||| |||||||
Sbjct 661 CCGCTTGTTTCTATCGTCAGAGATCTATCTTCGGTTCTTTTGCAAGATATGCTCGTAGGG 720
Query 724 TTCTCGTCTGCGACCGGTAATATTGTGTCCGAAATTTTTGTTCTTGGGTGGAGTTT-TGG 782
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 721 TTCTCGTCTGCGACCGGTAACATTGTGTCCGAAATTTTTGTTCTTGGGTGGAGTTTCAGG 780
Query 783 AGTGAATGGGGAAGCTCAGCCATTGGCCTTATCGAAACTTCCGAGATTGCCGGTGTGGGA 842
||||| |||||||||||||||||||||||||| |||||||||| ||||||||| |||||
Sbjct 781 -GTGAAGGGGGAAGCTCAGCCATTGGCCTTATCAAAACTTCCGATATTGCCGGTTTGGGA 839
Query 843 CT-TAAAACCTACAAGAGTCTACAGATTCTACAAGAACTGGGTGCCGTTGATCTCCCTCT 901
| |||||| || |||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct 840 -TCCAAAACCCACGAGAGTCTACAGATTCTACAAGAACTGGGTGCCATTGATTTCCCTCT 898
Query 902 TGTTGATTCCCTTCTTGCTTATAATCTTCCTCGTGCGCTTCATCATGAAGAGGAGAAGAA 961
||||||||||| || ||||| | |||||||||||||| |||||| ||| |||||| ||||
Sbjct 899 TGTTGATTCCCCTCGTGCTTGTTATCTTCCTCGTGCGTTTCATCCTGAGGAGGAGGAGAA 958
Query 962 AGTTCGCGGAGGAGGTGGAAGATTGGGAAACAGAGTTCGGGAAGAACCGACTAAGGTTCA 1021
| ||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct 959 AATTCGCTGAGGAGCTCGAAGATTGGGAAACAGAGTTCGGGAAGAACCGACTAAGGTTCA 1018
Query 1022 AGGACTTGTACTATGCAACAAAAGGGTTCAAGGATAAGAACATTCTTGGATCAGGCGGGT 1081
|||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1019 AGGACTTGTACTATGCCACAAAAGGGTTCAAGGATAAGAACCTTCTTGGATCAGGCGGGT 1078
Query 1082 TCGGGAGTGTTTACAAAGGTATCATGCCCAAGACGAAGAAGGAGATTGCCGTGAAAAGAG 1141
||||||| |||||||||||| | ||||| ||||| |||||||| || |||||||||||||
Sbjct 1079 TCGGGAGAGTTTACAAAGGTTTAATGCCAAAGACAAAGAAGGACATCGCCGTGAAAAGAG 1138
Query 1142 TCTCGAACGAATCTAGACAAGGTTTGAAAGAGTTCGTGGCTGAGATCGTGAGTATTGGAC 1201
||||||||||||| ||||| || | |||||||| |||||||||||||||||||||||||
Sbjct 1139 TCTCGAACGAATCCAGACAGGGGCTAAAAGAGTTTGTGGCTGAGATCGTGAGTATTGGAC 1198
Query 1202 AGATGAGTCACCGGAACTTGGTTCCTCTCGTGGGTTATTGCCGTCGGAGAGACGAGCTTC 1261
||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 1199 AGATGAGTCACCGAAACTTAGTCCCTCTCGTGGGTTATTGCCGTCGGAGAGACGAGCTTC 1258
Query 1262 TTCTGGTGTACGATTACATGCCCAATGGAAGTTTAGACAAGTATTTGTACAATAGTCCAG 1321
|||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||
Sbjct 1259 TTCTGGTGTACGATTACATGCCCAATGGGAGTTTGGACAAGTATTTGTACAACAGTCCAG 1318
Query 1322 AGGTAACCCTCGATTGGAAACAGAGGTTTAAAGTCATTAATGGCGTGGCCTCTGCCTTAT 1381
||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1319 AGGTAACCCTCAATTGGAAACAGAGGTTTAAAGTCATTAATGGTGTGGCCTCTGCCTTAT 1378
Query 1382 TTTATCTCCACGAGGAGTGGGAACAAGTGGTGATTCACCGCGACGTCAAAGCCAGCAACG 1441
| || ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1379 TCTACCTCCACGAGGAATGGGAACAAGTGGTGATTCACCGCGATGTCAAAGCCAGCAACG 1438
Query 1442 TCTTGTTAGATGCAGAGCTCAATGGGAGACTCGGGGATTTCGGTTTAGCTCAGTTGTGTG 1501
||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1439 TCTTGTTAGATGCGGAGCTCAATGGGAGACTCGGGGATTTCGGTTTATCTCAGTTGTGTG 1498
Query 1502 ATCACGGGTCTGATCCTCAAACTACGCGTGTAGTTGGAACTTGGGGATACCTAGCCCCCG 1561
|||||||||||||||||||||| || | | ||||||||||||||||||||||||||||
Sbjct 1499 ATCACGGGTCTGATCCTCAAACCACACACATTGTTGGAACTTGGGGATACCTAGCCCCCG 1558
Query 1562 ATCACATCAGGACAGGACGGGCCACAACCACTACTGATGTTTTTGCATTTGGGGTGCTCC 1621
||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||
Sbjct 1559 ATCACATCAGGACAGGACGGGCCACGACCGGTACTGATGTTTTTGCATTTGGGGTACTCC 1618
Query 1622 TACTAGAAGTGGCGTGCGGCAGACGTCCTATCGAGATTAATAACCAAAGTGGTGAGAGGG 1681
||||||||||||| ||||| |||||||||||||||||| ||||| | |||||||||||||
Sbjct 1619 TACTAGAAGTGGCATGCGGTAGACGTCCTATCGAGATTGATAACGAGAGTGGTGAGAGGG 1678
Query 1682 TCGTGCTCGTGGATTGGGTTTTTAGATTTTGGATGGAGGCAAACATTTTGGA-TGCTAAG 1740
|||||||||||||| ||||| |||| ||||||||||||| |||||| ||||| | |||||
Sbjct 1679 TCGTGCTCGTGGATAGGGTTCTTAGGTTTTGGATGGAGGGAAACATCTTGGACT-CTAAG 1737
Query 1741 GATCCTAATCTAGGGTCTGAGTATGACCAAAAAGAAGTCGAAATGGTTTTGAAGCTAGGT 1800
||||| |||||||||||||| |||||||||| ||| ||||||||||||||||||||||||
Sbjct 1738 GATCCGAATCTAGGGTCTGAATATGACCAAAGAGAGGTCGAAATGGTTTTGAAGCTAGGT 1797
Query 1801 TTGTTGTGCTCTCACTCCGACCCACTAGCTAGACCAACAATGAGACAAGTGCTACAGTAT 1860
||||||||||||||| |||| |||| |||||||||||| || ||||| ||||| || |||
Sbjct 1798 TTGTTGTGCTCTCACCCCGATCCACAAGCTAGACCAACTATCAGACAGGTGCTGCATTAT 1857
Query 1861 CTAAGGGGAGATGCAATGTTACCAGATCTGTCGCCGTTGGACTTGCGTGGGAGTGGGATC 1920
||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||
Sbjct 1858 CTAAGGGGAGATGCAATGTTACCAGATTTGTCGCCGTTGGACTTGCGTGGGAATGGGATG 1917
Query 1921 ATGTTGGGAACCCA-CAACGGGTCTAATGAGTCGGGCATGTTTACCAGTGGATCTTCTGT 1979
|||||||||| ||| || ||| |||| |||||| ||||||||||||||||||||||| ||
Sbjct 1918 ATGTTGGGAAACCATCA-CGGATCTAGTGAGTCAGGCATGTTTACCAGTGGATCTTCAGT 1976
Query 1980 TGCTTATTCTCTACTCTCCAGTGGGAGGTGA 2010
||||||||||||||||||||| |||||||||
Sbjct 1977 TGCTTATTCTCTACTCTCCAGCGGGAGGTGA 2007
> Ahg943489 jgi|Araly1|943489|scaffold_604033.1
Length=2059
Score = 2265 bits (1226), Expect = 0.0
Identities = 1774/2034 (87%), Gaps = 56/2034 (3%)
Strand=Plus/Plus
Query 11 TCAAGCTCTTCACCATCTTCTTCTTAAGCTTCTTTTGGCAATCCCTAAAGTCCTCTTCCC 70
||||| || |||| ||| ||||||| |||||| | | ||||||| ||| ||||||||||
Sbjct 28 TCAAGTTCCTCACTATCGTCTTCTTGAGCTTCCTCTCCCAATCCCAAAAATCCTCTTCCC 87
Query 71 AAATTATCGACTTCACTTACAATGGCTTCCGTCCTCCA-CCGAC-AGACATATCCATCCT 128
||||| | || || |||||||||||||||||||||||| || || | ||||||| ||||
Sbjct 88 AAATTCTTGAATTAACTTACAATGGCTTCCGTCCTCCATCC-ACTA-ACATATCAATCCA 145
Query 129 AGGAATTGCCACCATCACACCAAACGGTCTCTTAAAGCTAACCAACACAACCATGCAGAG 188
||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||
Sbjct 146 AGGAATTGCCACCATCACACCTAACGGTCTCTTGAAGCTAACCAACACAAGCATGCAGAG 205
Query 189 CACCGGTCACGCCTTCTATACCAAACCAATCCGGTTCAAAGATTCTCCAAACGGTACCGT 248
||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct 206 AACCGGTCACGCCTTCTACACCAAACCAATCCGGTTCAAAGATTCTCCAAACGGTAATGT 265
Query 249 ATCGTCTTTCTCCACTACCTTTGTCTTCGCTATTCACTCTCAGAT-ACC-CA-TT-GCA- 303
| ||| ||||| || || |||||||| | ||| |||||| |||| || || || |||
Sbjct 266 CTTGTCATTCTCAACAACTTTTGTCTTTGATATCCACTCTGAGATCCCCACACTTAGCAG 325
Query 304 C-ACGGCATGGCCTTTGTCATCGCTCCTAACCCTCGCCTCCCATTCGGCAGCCCCTTACA 362
| ||||||||||||||||||||||||||||||| |||||||||||||||| || || ||
Sbjct 326 CGGCGGCATGGCCTTTGTCATCGCTCCTAACCCTGGCCTCCCATTCGGCAGTCCTTTCCA 385
Query 363 ATACCTCGGTCTCTTCAATGTAACAAACAACGGTAACGTTAGGAACCATGTATTCGCTGT 422
||||||||| ||||| || || |||||||||||||||| || ||| ||||||||||||||
Sbjct 386 ATACCTCGGCCTCTTAAACGTCACAAACAACGGTAACGATACGAATCATGTATTCGCTGT 445
Query 423 CGAACTTGACACGATTATGAATATCGAGTTCAATGATACGAACAATAACCATGTTGGAAT 482
|||||||||||| ||| ||| ||||||| ||||||||| ||||||||||||||| |||||
Sbjct 446 CGAACTTGACACAATTTTGAGTATCGAGCTCAATGATATGAACAATAACCATGTGGGAAT 505
Query 483 CGATATCAATAGCTTGA-ACTCGGTGAAAAGTT-CTCCTGCTGGGTACTGGGACGAGAAC 540
||||||||| ||||||| | ||||| ||||||| || | ||||||||||||||||||||
Sbjct 506 CGATATCAACAGCTTGATA-TCGGTAAAAAGTTCCT-CGGCTGGGTACTGGGACGAGAAG 563
Query 541 GATCAGTTTCACAATCTGACTTTGATCAGT-AGTAAACGGATGCAGGTTTGGGTCGATTT 599
||||||||| | |||||||||||||| ||| | |||||| |||||||||||| |||| |
Sbjct 564 GATCAGTTTAATAATCTGACTTTGATTAGTCA-TAAACGTATGCAGGTTTGGATCGACTA 622
Query 600 CGATGGTCCCACCCATCTAATCGATGTAACCATGGCTCCGTTTGGTGAGGTTAAACCTAG 659
|||||||| ||||||| ||||||||||||||||||||| ||| | ||| ||||||||
Sbjct 623 CGATGGTCGTACCCATCGAATCGATGTAACCATGGCTCCCTTTAGCGAGAATAAACCTAA 682
Query 660 GAAACCGCTTGTTTCTATCGTCAGAGATCTGTCCTCTGTTCTTTTGCAAGATATGTTCGT 719
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 683 AAAACCGCTTGTTTCTATTGTCAGAGATCTGTCCTCTGTTCTTTTGCAAGATATGTTCGT 742
Query 720 AGGTTTCTCGTCTGCGACCGGTAATATTG-TGTCCGAA-ATTTTTGTTCTTGGGTGGAGT 777
|||||||||||||||||||||| || || |||| ||| | |||||||||||| |||| |
Sbjct 743 AGGTTTCTCGTCTGCGACCGGTTCTA-TGTTGTCAGAACA-TTTTGTTCTTGGCTGGAAT 800
Query 778 TT-TGGAGTGAATGGGGAAGCTCAGCCA------TTGGCCTTATCGAAACTTCCGAGATT 830
|| || ||||| ||| ||||||||||| |||||||||||||||||||||| |||
Sbjct 801 TTCCGG-GTGAACGGGAAAGCTCAGCCACTGGCCTTGGCCTTATCGAAACTTCCGATATT 859
Query 831 GCCGGTGTGGGACTT-AAAACCTACAAGAG-TCTACAGATTCTA-CAAGAACTGGGTGCC 887
||| || ||||| || |||||| | || | ||||||| ||| | |||||||||| ||||
Sbjct 860 GCCTGTATGGGA-TTCAAAACCCGCGAG-GTTCTACAGCTTC-ATCAAGAACTGGATGCC 916
Query 888 GTTGATCTCCCTCTTGTTGATTCCCTTCTTGCTTATAATCTTCCTCGTGCGC-TTCATCA 946
|| ||||||||| |||||||||||| |||||||||| || ||||| |||||| ||| ||
Sbjct 917 GTGGATCTCCCTTTTGTTGATTCCCCTCTTGCTTATTATTTTCCTTGTGCGCTTTC-TCG 975
Query 947 TGAAGAGGA-GAAGAAAGTTCGCGGAGGAGGTGGAAGATTGGGAAACAGAGTTCGGGAAG 1005
||| ||||| | ||||||||||| |||||| | |||||||||||||||||||||||||||
Sbjct 976 TGAGGAGGACG-AGAAAGTTCGCAGAGGAGCTTGAAGATTGGGAAACAGAGTTCGGGAAG 1034
Query 1006 AACCGACTAAGGTTCAAGGACTTGTACTATGCAACAAAAGGGTTCAAGGATAAGAACATT 1065
||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||
Sbjct 1035 AACCGGCTAAGGTTCAAGGACTTGTACTATGCCACAAAAGGGTTCAAGGATAAGAACCTT 1094
Query 1066 CTTGGATCAGGCGGGTTCGGGAGTGTTTACAAAGGTATCATGCCCAAGACGAAGAAGGAG 1125
||||||||||||||||||||||| ||||||| |||| |||||| ||||| |||||||||
Sbjct 1095 CTTGGATCAGGCGGGTTCGGGAGGGTTTACAGAGGTTTCATGCTGAAGACTAAGAAGGAG 1154
Query 1126 ATTGCCGTGAAAAGAGTCTCGAACGAATCTAGACAAGGTTTGAAAGAGTTCGTGGCTGAG 1185
|| || ||||||||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct 1155 ATCGCGGTGAAAAGAGTCTCGAACGAATCCCGACAAGGTTTGAAAGAGTTTGTGGCTGAG 1214
Query 1186 ATCGTGAGTATTGGACAGATGAGTCACCGGAACTTGGTTCCTCTCGTGGGTTATTGCCGT 1245
|||||||||||||||||||||||||| |||||||| || ||||||||||||||||| ||
Sbjct 1215 ATCGTGAGTATTGGACAGATGAGTCATCGGAACTTAGTCCCTCTCGTGGGTTATTGTCGC 1274
Query 1246 CGGAGAGACGAGCTTCTTCTGGTGTACGATTACATGCCCAATGGAAGTTTAGACAAGTAT 1305
|||||||| ||||||||| ||||||| ||||| ||||| |||||||| ||||||||||||
Sbjct 1275 CGGAGAGATGAGCTTCTTTTGGTGTATGATTATATGCCTAATGGAAGCTTAGACAAGTAT 1334
Query 1306 TTGTACAATAGTCCAGAGGTAACCCTCGATTGGAAACAGAGGTTTAAAGTCATTAATGGC 1365
|||||||| | ||||||||||| || ||||||||||||||||||||||||| |||||
Sbjct 1335 TTGTACAACAATCCAGAGGTAAGACTAAATTGGAAACAGAGGTTTAAAGTCATCAATGGT 1394
Query 1366 GTGGCCTCTGCCTTATTTTATCTCCACGAGGAGTGGGAACAAGTGGTGATTCACCGCGAC 1425
||||| ||||||||||| || || |||||||| |||||||||||||||||||||||||||
Sbjct 1395 GTGGCTTCTGCCTTATTCTACCTTCACGAGGAATGGGAACAAGTGGTGATTCACCGCGAC 1454
Query 1426 GTCAAAGCCAGCAACGTCTTGTTAGATGCAGAGCT-CAATGGGAGACTCGGGGATTTCGG 1484
||||||| || ||| ||||||||||||||||| | |||||| |||||||| ||||| ||
Sbjct 1455 ATCAAAGCAAGTAACATCTTGTTAGATGCAGAG-TACAATGGAAGACTCGGAGATTTTGG 1513
Query 1485 TTTAGCTCAG-TTGTGTGATCACGGGTCTGATCCTCAAACTACGCGTGTAGTTGGAACTT 1543
|||||| | | ||||| ||||||||||| ||| ||||||| ||||| || ||||||||||
Sbjct 1514 TTTAGC-CCGATTGTGCGATCACGGGTCAGATGCTCAAACCACGCGCGTTGTTGGAACTT 1572
Query 1544 GGGGATACCTAGCCCCCGATCACATCAGGACAGGACGGGCCACAACCACTACTGATGTTT 1603
|||||||||||| ||| ||||| | ||||||||||||||||||||| ||||||||||||
Sbjct 1573 GGGGATACCTAGACCCTGATCATGTTAGGACAGGACGGGCCACAACCGCTACTGATGTTT 1632
Query 1604 TTGCATTTGGGGTGCTCCTACTAGAAGTGGCGTGCGGCAGACGTCCTATCGAGATTAAT- 1662
|||| ||||||||||||||||||||||||| |||||| |||||||| ||||||||| |
Sbjct 1633 TTGCGTTTGGGGTGCTCCTACTAGAAGTGGTGTGCGGTAGACGTCCCATCGAGATT-GTA 1691
Query 1663 AACCAAAGTGGTGAGAGGGTCGTGCTCGTGG-ATTGGGTTTTTAGATTTTGGATGGA-GG 1720
||| | |||| ||||| ||| ||||||||| ||| ||||||| | |||||||| || ||
Sbjct 1692 AACGAGAGTGATGAGACCGTCTTGCTCGTGGAATT-GGTTTTTGGGTTTTGGATAGAGGG 1750
Query 1721 CAAACATTTTGGATGCTAAGGATCCTAATCTAGGG-TCTGAGTATGACCAAAAAGAAGTC 1779
|||| | |||||||||| |||||| ||||||||| || ||||||||||||| |||||||
Sbjct 1751 AAAAC-TCTTGGATGCTACGGATCCGAATCTAGGGTTC-GAGTATGACCAAAGAGAAGTC 1808
Query 1780 GAAATGGTTTTGAAGCTAGGTTTGTTGTGCTCTCACTCCGACCCACTAGCTAGACCAACA 1839
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1809 GAAATGGTTTTGAAGCTAGGTTTGTTGTGCTCTCACTCCGACCCACAAGCTAGACCAACT 1868
Query 1840 ATGAGACAAGTGCTACAGTATCTAAGGGGAGATGCAATGTTACCAGATCTGTCGCCGTTG 1899
|||||||||||| |||| |||||||||||||||||||||||||||||| | |||| ||||
Sbjct 1869 ATGAGACAAGTGTTACAATATCTAAGGGGAGATGCAATGTTACCAGATTTATCGCTGTTG 1928
Query 1900 GACTTGCGTGGGAGTGGGATCATGTTGGGAACCCA-CAACGGGTCTAATGAGTCGGGCAT 1958
||||| |||||||||| | |||||||||| | | | |||| | || |||||| ||||
Sbjct 1929 GACTTCCGTGGGAGTGAAAAAATGTTGGGAATC-AGCCACGGATTTAGTGAGTCATGCAT 1987
Query 1959 GTTTACCAGTGGATCTTCTG-TTGCTTATTCTC-TACTCTCCAGTGGGAGGTGA 2010
|||||||||| ||||||| | ||||||| || | |||| || | |||||||||
Sbjct 1988 GTTTACCAGTAGATCTTC-GATTGCTTACTC-CATACTTTCTGGCGGGAGGTGA 2039
> Ahg490326 jgi|Araly1|490326|fgenesh2_kg.6__3460__AT4G02410.1
Length=2190
Score = 1997 bits (1081), Expect = 0.0
Identities = 1738/2048 (85%), Gaps = 73/2048 (4%)
Strand=Plus/Plus
Query 7 TTCATCAAGCTCTTCACCATCTTCTTCTTAAGC-TTCT--TTTGGCAATCCCTAAAGTCC 63
||| |||||||||| |||||||||||||| | | || | | ||| ||||||||||
Sbjct 17 TTCTTCAAGCTCTTTACCATCTTCTTCTTCTTCGTCCTACTCTCTCAACCCCTAAAGTCA 76
Query 64 TCTTCCCAAATTATCGACTTCACTTACAATGGCTTCCGTCCTCCACCGAC-AGACATATC 122
||||| |||||| ||||||||||||||||| |||||| || |||||| || | |||||||
Sbjct 77 TCTTCTCAAATTCTCGACTTCACTTACAATAGCTTCCATCGTCCACCAACTA-ACATATC 135
Query 123 CATCCTAGGAATTGCCACCA-TCACACCAAACGGTCTCTT-AAAGCTAACCAACACAACC 180
||||| ||| ||||||| || |||||||||||||| |||| ||| |||||| ||| ||||
Sbjct 136 CATCCAAGGGATTGCCA-CAGTCACACCAAACGGTATCTTGAAA-CTAACCGACAAAACC 193
Query 181 ATGCA-GAGCACCGGTCACGCCTTCTATACCAAACCAATCCGGTTCAAAGATTCTCCAAA 239
|| | || ||||||||||| ||||| ||| ||||||||||||||||||||||||||||
Sbjct 194 GTG-ATAAGTACCGGTCACGCTTTCTACACCGAACCAATCCGGTTCAAAGATTCTCCAAA 252
Query 240 CGGTACCGTATCGTCTTTCTCCACTACCTTTGTCTTCGCTATTC-ACTCTCAGATACC-- 296
|| || || ||||| |||||||| ||||| ||| ||| || || ||||| ||| ||
Sbjct 253 CGACACTGTCTCGTCCTTCTCCACAACCTTCGTCATCGGTA-TCTACTCTGGGATCCCGA 311
Query 297 C-ATT-GC--ACACGGCATGGCCTTTGTCATCGCTCCT-AACCCTCGCCTCCCATTCGGC 351
| ||| || ||||||||||||||| ||||||||||| ||||| |||| ||| || |
Sbjct 312 CGATTAGCGGCCACGGCATGGCCTTTTTCATCGCTCCTAAACCC-ATCCTCTCATCCGCC 370
Query 352 A-GCCCCTTACAATACCTCGGTCTCTTCAA-TGTAACAAACAACGGTAACGTTAGGAACC 409
| | || ||||||||||||||||| || | || ||||||||||||| || ||| |
Sbjct 371 ATG-GCCAGCCAATACCTCGGTCTCTTTAACAG-CACCAACAACGGTAACGATACGAATC 428
Query 410 ATGTATTCGCTGTCGAACTTGACACGATTATGAATATC-GAGTTCAATGATACGAACAAT 468
|| || ||||||||||| |||| ||||| ||||| | |||||||||||||||||| ||
Sbjct 429 ATATACTCGCTGTCGAATTTGATACGATCATGAA-CCCTGAGTTCAATGATACGAACGAT 487
Query 469 AACCATGTTGGAATCGATATCAATAGCTTGAAC-TCGGTGAAAAGTTCTCCTGCTGGGTA 527
|||||| | |||||| |||| ||||||||| || ||||| ||||| || |||||||||||
Sbjct 488 AACCATCTGGGAATCAATATAAATAGCTTG-ACATCGGTTAAAAGCTCGCCTGCTGGGTA 546
Query 528 CTGGGACGAGAACGATCAGTTTCACAATCTGACTTTGATCAGTAGTAAACGGATGCAGGT 587
||||||||||||| || |||| |||||||||||||||| ||| ||||||||||||| ||
Sbjct 547 TTGGGACGAGAACGGTCGGTTTAACAATCTGACTTTGATAAGTCGTAAACGGATGCAAGT 606
Query 588 TTGGGTCGATTTCGATGGTCCCACCCATCTAATCGATGTAACCATGGCTCCGTTTGGTGA 647
|||||| |||| ||||| || || ||| ||||||||||| |||||||||||||||||
Sbjct 607 TTGGGTTGATTACGATGATCGTACTAATCAAATCGATGTAATTATGGCTCCGTTTGGTGA 666
Query 648 GGTTAAACCTAGGAAACCGCTTGTTTCTATCGTCAGAGATCTGTCCTCTG-TTCTT-TTG 705
|||||||||||||||||||||||||||| | || |||||||| || || | || || |||
Sbjct 667 GGTTAAACCTAGGAAACCGCTTGTTTCTGTTGTTAGAGATCTATCTTC-GATT-TTCTTG 724
Query 706 CAAGATATGTTCGTAGGTTTCTCGTCTGCGACCGGTAATATTGTGTCCGAA-ATTTTTGT 764
|||||||||| | ||||||||||||||||||| ||| || || |||| ||| | ||||||
Sbjct 725 CAAGATATGTACTTAGGTTTCTCGTCTGCGACTGGTTATGTTTTGTCGGAACA-TTTTGT 783
Query 765 TCTTGGGTGGAGTTT--TGGAGTGAATGGG--GA-AGCTCAGCCATTGGCCTTATCGAAA 819
| |||| |||||||| | | ||||| ||| || ||||| ||| ||| | |||||||||
Sbjct 784 TTTTGGTTGGAGTTTCAT-G-GTGAAGGGGAAGACAGCTCCGCCGTTGACTTTATCGAAA 841
Query 820 CTTCCGAGATTGCCGGTGTGGGACTTAAAACCTACAAGAGTCTACAGA--TTCTACAAGA 877
|||||| ||| || | ||| | || || ||| | |||||| || || ||||
Sbjct 842 ATTCCGAAATTTCC---GAGGG---TCGGGCCAACGAGA-T-TACAGAGGTTTTATAAGA 893
Query 878 ACTGGGTGCCGTTGA-TCTCCCTCTTGTTGATT-C-C-C----TTCTTG-CTT-ATAATC 927
|| || ||||||| | | ||||||||||||||| | | | || ||| ||| | |||
Sbjct 894 ACCGGATGCCGTT-ATTTTCCCTCTTGTTGATTCCTCTCTTGTTTGTTGTCTTGCTTATC 952
Query 928 TTCCTCGTGCGCTTCATCATGAAGAGGAGAAGAAAGTTCGCGGAGGAGGTGGAAGATTGG 987
|||||||||||||| ||| ||| |||||| |||||||| ||||||||| | |||||||||
Sbjct 953 TTCCTCGTGCGCTTTATCGTGAGGAGGAGGAGAAAGTTTGCGGAGGAGTTTGAAGATTGG 1012
Query 988 GAAACAGAGTTCGGGAAGAACCGACTAAGGTTCAAGGACTTGTACTATGCAACAAAAGGG 1047
|||||||| || ||||||||||| ||||||||||||||||||||||||| || ||||||
Sbjct 1013 GAAACAGAATTTGGGAAGAACCGGTTAAGGTTCAAGGACTTGTACTATGCCACTAAAGGG 1072
Query 1048 TTCAAGGATAAGAACATTCTTGGATCAGGCGGGTTCGGGAGTGTTTACAAAGGTATCATG 1107
|||||||||||| || ||||||||||||| ||||| ||||| ||||| | |||| | |||
Sbjct 1073 TTCAAGGATAAGGACCTTCTTGGATCAGGTGGGTTTGGGAGGGTTTATAGAGGTGTAATG 1132
Query 1108 CCCAAGACGAAGAAGGAGATTGCCGTGAAAAGAGTCTCGAACGAATCTAGACAAGGTTTG 1167
|| | ||||||||||||| |||||||||||||||| ||||| |||||| ||||||| |||
Sbjct 1133 CCGACGACGAAGAAGGAGGTTGCCGTGAAAAGAGTGTCGAATGAATCTCGACAAGGGTTG 1192
Query 1168 AAAGAGTTCGTGGCTGAGATCGTGAGTATTGG-ACAGATGAGTCACCGGAACTTGGTTCC 1226
|||||||| ||||||||||| ||||||||||| | |||||||||| |||||||| |||||
Sbjct 1193 AAAGAGTTTGTGGCTGAGATTGTGAGTATTGGTA-AGATGAGTCATCGGAACTTAGTTCC 1251
Query 1227 TCTCGTGGGTTATTGCCGTCGGAGAGACGAGCTTCTTCTGGTGTACGATTACATGCCCAA 1286
|||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct 1252 TCTCTTGGGTTATTGCCGTCGTAGAGACGAGCTTCTTCTGGTGTATGATTACATGCCCAA 1311
Query 1287 TGGAAGTTTAGACAAGTATTTGTACAATAGTCCAGAGGTAACCCTCGATTGGAAACAGAG 1346
|||||| |||||||||||||||||| || |||| ||| |||| || ||||||||||||||
Sbjct 1312 TGGAAGCTTAGACAAGTATTTGTACGATTGTCCGGAGATAACTCTGGATTGGAAACAGAG 1371
Query 1347 GTTTAAAGTCATTAAT-GGCGTGGCCTCTGCCTTATTTTATCTCCACGAGGAGTGGGAAC 1405
|||||| || ||| || || ||||| || | ||| || |||||||||||||| |||||||
Sbjct 1372 GTTTAATGTAATT-ATAGGTGTGGCGTCGGGCTTGTTCTATCTCCACGAGGAATGGGAAC 1430
Query 1406 AAGTGGTGATTCACCGCGACGTCAAAGCCAGCAACGTCTTGTTAGATGCAGAGCT-CAAT 1464
|||||||||||||||||||| ||||||||||||||||||||||||| || ||| | ||||
Sbjct 1431 AAGTGGTGATTCACCGCGACATCAAAGCCAGCAACGTCTTGTTAGACGCGGAG-TACAAT 1489
Query 1465 GGGAGACTCGGGGATTTCGGTTTAGCTCAGTTGTGTGATCACGGGTCTGATCCTCAAACT 1524
||||||||||||||||| |||||||||| |||||| |||||||| || ||||||||||||
Sbjct 1490 GGGAGACTCGGGGATTTTGGTTTAGCTCGGTTGTGCGATCACGGTTCGGATCCTCAAACT 1549
Query 1525 ACGCGTGTAGTTGGAACTTGGGGATACCTAGCCCCCGATCACATCAGGACAGGACGGGCC 1584
|||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct 1550 ACGCGTGTCGTTGGAACTTGGGGATACCTAGCCCCCGATCATGTCAGAACAGGACGGGCC 1609
Query 1585 ACAACCACTACTGATGTTTTTGCATTTGGGGTGCTCCTACTAGAAGTGGCGTGCGGCAGA 1644
|||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct 1610 ACAACCGCTACTGATGTTTTTGCGTTTGGGGTGCTCCTACTAGAAGTTGCGTGCGGCAGA 1669
Query 1645 CGTCCTATCGAGATTAATAACCAAAGTGGTGAGAGGGTCGTGCTCGTGGATTGGGTTTTT 1704
||||||||||||||| | | | |||| |||||| ||| |||||||||||| |||||||
Sbjct 1670 CGTCCTATCGAGATTGAGATTGAGAGTGATGAGAGCGTCTTGCTCGTGGATTCGGTTTTT 1729
Query 1705 AGATTTTGGATGGAGGCAAACATTTTGGATGCTAAGGATCCTAATCTAGGGTCT-GAGTA 1763
| |||||||| |||| |||||| |||||||||| |||||| |||||||| | | || ||
Sbjct 1730 GGGTTTTGGATAGAGGGAAACATCTTGGATGCTACGGATCCGAATCTAGGAT-TGGACTA 1788
Query 1764 TGACCAAAAAGAAGTCGAAATGGTTTTGAAGCTAGGTTTGTTGTGCTCTCACTCCGACCC 1823
|||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1789 TGACCAAAGAGAGGTCGAAATGGTTTTGAAGCTAGGTTTGTTATGCTCTCACTCCGACCC 1848
Query 1824 ACTAGCTAGACCAACAATGAGACAAGTGCTACAGTATCTAAGGGGAGATGCAATGTTACC 1883
|| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1849 ACAAGTTAGACCAACAATGAGACAAGTGCTACAGTATCTAAGGGGAGATGCAATGTTACC 1908
Query 1884 AGATCTGTCGCCGTTGGACTTGCGTGGGAGTGGGATCATGTTGGGAACCCACAACGGGTC 1943
|||| | |||||||||||||| ||||||||||||| |||||||||| |||| |||| |
Sbjct 1909 AGATGTATCGCCGTTGGACTTCCGTGGGAGTGGGAAAATGTTGGGAATCCACCACGGATT 1968
Query 1944 TAATGAGTCGGGCATGTTTACCAGTGGATCTTCTG-TTGCTTATTCTCTACTCTCCAGTG 2002
|| ||||| ||| ||||||||||||||||| | ||||||||||| ||||||| | |
Sbjct 1969 TAGTGAGTTAAGCACATTTACCAGTGGATCTTC-GATTGCTTATTCTATACTCTCTGGCG 2027
Query 2003 GGAGGTGA 2010
||||||||
Sbjct 2028 GGAGGTGA 2035
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 75571046080
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5