BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT4G02510.1 Length=4752 Score E Sequences producing significant alignments: (Bits) Value Ahg943476 jgi|Araly1|943476|scaffold_604020.1 6453 0.0 Ahg943479 jgi|Araly1|943479|scaffold_604023.1 1048 0.0 Ahg936070 jgi|Araly1|936070|scaffold_500261.1 359 1e-97 > Ahg943476 jgi|Araly1|943476|scaffold_604020.1 Length=4680 Score = 6453 bits (3494), Expect = 0.0 Identities = 3881/4065 (95%), Gaps = 37/4065 (1%) Strand=Plus/Plus Query 581 ATGAGGGGGAGAGTGAGTTGGGTGGAAAAGTTGATGTTGACGATAAAAGTGATAATGTTA 640 |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 631 ATGAGGAGGAGAGTGAGTTGAGTGGAAAAGTTGATGTTGACGATAAAAGTGATAATGTTA 690 Query 641 TTGAAGAAGAGGGTGTGGAGTTAACTGATAAAGGAGACGTCATTGTGAACTCGTCCCCTG 700 ||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||| Sbjct 691 TTGAAGAAGAGGGTGTGAAGTTAACTGATAAAGGAGACGTCATAGTGGACTCGTCCCCTG 750 Query 701 TAGAATCAGTGCATGTTGATGTGGCAAAACCAGGGGTGGTTGTTGTAGGAGACGCAGAGG 760 |||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct 751 TAGAGTCAGTGCATGTTGATGTGGCAAAACCAGGGGTGGCTGTAGTAGGAGACGCAGAGG 810 Query 761 GAAGTGAGGAGTTGAAGATTAATGCTGATGCTGAAACTCTTGAAGTGGCTAATAAGTTTG 820 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 811 GAAGTGAGGAGTTGAAGATTAATGCTGATGCTGAAACTCTTGAAGTGGCGAATAAGTTTG 870 Query 821 ATCAAATTGGGGATGATGATAGTGGTGAATTTGAACCTGTGTCTGACAAGGCCATTGAGG 880 |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct 871 ATCAAATTGGGGATGATGATGGTGGTGAATTTGAACCTGTGTCTGATAAGGCCATTGAGG 930 Query 881 AGGTAGAAGAAAAATTTACTAGCGAATCAGACTCTATTGCAGACTCCTCTAAGTTAGAAT 940 |||||||||||||| | | || | || | | |||||||||||||| |||| || Sbjct 931 AGGTAGAAGAAAAA--T--T---GAGT-AG--TGGA--GCAGACTCCTCTAAATTAGTAT 978 Query 941 CTGTGGATACCAGTGCTGTAGAGCCAGAGGTTGTAGCTGCCGAGAGTGGGAGTGAACCAA 1000 |||||||||||| ||||| |||||||||||| ||||||||||||||||||| |||||||| Sbjct 979 CTGTGGATACCAATGCTGCAGAGCCAGAGGTCGTAGCTGCCGAGAGTGGGACTGAACCAA 1038 Query 1001 AGGATGTGGAA-AAAGCCAACGGATTGGAGAAGGGTATGACTTATGCTGAAGTAATCAAG 1059 ||||||||||| ||| | |||||||||||||||||||||||||||||||| ||||||||| Sbjct 1039 AGGATGTGGAAGAAA-CTAACGGATTGGAGAAGGGTATGACTTATGCTGAGGTAATCAAG 1097 Query 1060 GCAGCTAGTGCAGTAGCTGACAATGGAACCAAAGAGGAGGAGAGTGTGCTCGGTGGCATA 1119 ||||||| |||||||||||||||||||||||||||||||||||||||| || ||||| || Sbjct 1098 GCAGCTACTGCAGTAGCTGACAATGGAACCAAAGAGGAGGAGAGTGTGTTCAGTGGCGTA 1157 Query 1120 GTCGATGATGCAGAAGAAGGTGTTAAGTTAAACAACAAAGGAGACTTTGTGGTGGACTCA 1179 |||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct 1158 GTCGATGATGAAGAAGAAGGTGTTAAGTTAACCAACAAAAGAGACTTTGTGGTGGACTCA 1217 Query 1180 TCTGCTATTGAAGCTGTGAATGTAGATGTGGCAAAGCCAGGGGTTGTTGTTGTTGGAGAC 1239 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1218 TCTGCTATAAAAGCTGTGAATGTAGATGTGGCAAAGCCAGGGGTTGTTGTTGTTGGAGAC 1277 Query 1240 GTAGAGGTGAGTGAGGTGCTGGAAACTGATGGCAACATCCCTGATGTGCATAATAAGTTT 1299 ||||||| ||||||||||||||||||||||| || ||| |||||||||||||||||||| Sbjct 1278 GTAGAGGCAAGTGAGGTGCTGGAAACTGATGGTAAGATCACTGATGTGCATAATAAGTTT 1337 Query 1300 GATCCAATTGGCCAAGGTGAAGGTGGTGAAGTTGAACTTGAATCCGATAAAGCCACAGAG 1359 |||||| ||||||||| |||||||| || |||||||| |||||| ||||||||||| ||| Sbjct 1338 GATCCAGTTGGCCAAGTTGAAGGTGATGGAGTTGAACGTGAATCTGATAAAGCCACTGAG 1397 Query 1360 GAGGGAGGAGGA-AAGTTGGTTAGTGAAGGAGACTCTATGGTTGACTCCTCTGTGGTGGA 1418 ||||||||| || |||||| |||||||||||||||| ||||||| || ||||||||||| Sbjct 1398 GAGGGAGGA-GAGAAGTTGACTAGTGAAGGAGACTCTGTGGTTGATTCATCTGTGGTGGA 1456 Query 1419 CTCTGTTGATGCTGATATCAATGTTGCAGAGCCAGGGGTTGTGGTTGTCGGGGCGGCTAA 1478 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct 1457 ATCTGTTGATGCTGATATCAATGTTGCAGAGCCAGGGGTTGTGGTTGTTGGGGCGGCGAA 1516 Query 1479 GGAGGCTGTAATTAAGGAAGATGATAAAGATGATGAGGTTGACAAGACCATCTCAAATAT 1538 ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| Sbjct 1517 GGAGGCTGTAATTAAGGAAGATGATGGAGATGATGAGGTTGACAAGACCATCCCAAATAT 1576 Query 1539 TGAGGAACCTGATGACCTGACTGCTGCATATGATGGAAATTTTGAATTGGCTGTTAAGGA 1598 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1577 TGAGGAACCTGATGACCTGACTGCTGCATATGATGGAAATTTTGAATTGGCTGCTAAGGA 1636 Query 1599 AATATCAGAGGCTGCCAAAGTAGAGCCAGACGAACCAAAAGTAGGTGTGGAAGTAGAAGA 1658 |||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct 1637 AATATCAGAGGCAGCCAAAGTAGAGCCTGACGAACCAAAAGTAGGTGTGGAAGTGGAAGA 1696 Query 1659 ATTGCCTGTTTCTGAAAGTTTAAAAGTGGGTTCAGTTGATGCAGAAGAGGATTCAATTCC 1718 || |||||||||||||||||||| ||||||||| ||||||||| |||||||||||| ||| Sbjct 1697 ATCGCCTGTTTCTGAAAGTTTAACAGTGGGTTCGGTTGATGCAAAAGAGGATTCAAATCC 1756 Query 1719 TGCAGCTGAGTCACAG-TT---------------T--GAGGTTCGGAAAGTTGTCGAAGG 1760 |||||||| ||||||| || | ||||||||| ||||| ||||||| Sbjct 1757 TGCAGCTGGGTCACAGTTTGAAGCAAACCAAAACTCAGAGGTTCGGGAAGTTTTCGAAGG 1816 Query 1761 GGACAGTGCTGAAGAGGATGAAAACAAGCTCCCAGTCGAAGACATTGTTTCTTCTCGTGA 1820 ||||| ||||||||||| || |||||||||||||| |||||||||||||||||||||||| Sbjct 1817 GGACAATGCTGAAGAGGGTGGAAACAAGCTCCCAGCCGAAGACATTGTTTCTTCTCGTGA 1876 Query 1821 GTTTAGCTTTGGAGGCAAGGAAGTGGACCAGGAACCTTCTGGCGAAGGTGTTACCAGGGT 1880 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1877 GTTTAGCTTTGAAGGCAAGGAAGTGGACCAGGAACCTTCTGGCGAAGGTGTTACCAGGGT 1936 Query 1881 TGATGGGTCTGAAAGTGAAGAAGAAACTGAAGAGATGATATTTGGGAGTTCTGAAGCTGC 1940 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1937 TGATGGGTCTGAAAGTGAAGAAGAAACTGAAGAGATGATATTTGGGAGTTCTGAAGCTGC 1996 Query 1941 AAAACAGTTCTTAGCAGAGTTGGAAAAGGCTTCTTCTGGTATAGAGGCACATTCTGATGA 2000 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1997 AAAACAGTTCTTAGCAGAGCTGGAAAAGGCTTCTTCTGGTATAGAGGCACATTCTGATGA 2056 Query 2001 AGCAAACATTTCTAACAATATGTCAGATAGGATTGATGGCCAGATTGTCACCGATTCTGA 2060 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2057 AGCAAACATTTCTAACAATATGTCAGATAGGATTGATGGCCAGATTGTCACCGATTCTGA 2116 Query 2061 CGAGGATGTAGACACAGAGGATGAAGGTGAGGAGAAAATGTTTGATACTGCAGCTTTGGC 2120 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 2117 CGAGGATGTAGACACAGAGGATGAAGGTGAGGAGAAAATGTTTGATTCTGCAGCTTTGGC 2176 Query 2121 TGCGCTTTTGAAGGCAGCCACTGGTGGTGGAAGTTCAGAAGGTGGCAATTTTACCATAAC 2180 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 2177 TGCGCTTTTGAAGGCAGCCACTGGTGGTGGAAGTTCAGAAGGTGGCAACTTTACCATAAC 2236 Query 2181 ATCTCAGGATGGCACGAAGCTTTTCTCTATGGATCGACCTGCTGGTTTGAGTTCATCGTT 2240 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 2237 ATCTCAGGATGGCACAAAGCTTTTCTCTATGGATCGACCTGCTGGTTTGAGTTCATCGTT 2296 Query 2241 AAGGCCCTTGAAGCCTGCAGCAGCTCCACGTGCAAACCGTTCCAACATCTTTTCCAATTC 2300 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 2297 AAGGCCCTTGAAACCTGCAGCAGCTCCACGTGCAAACCGTTCCAACATCTTTTCCAATCC 2356 Query 2301 TAATGTCACAATGGCAGATGAGACTGAGATTAACTTGAGCGAGGAAGAGAAACAGAAATT 2360 ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| Sbjct 2357 TAATGTCACAATGGCGGATGAGACTGAGGTTAACTTGAGCGAGGAAGAGAAACAGAAATT 2416 Query 2361 AGAAAAGTTGCAAAGCCTCCGTGTGAAGTTTTTGCGGCTTTTGCAAAGGTTGGGTCATTC 2420 ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct 2417 AGAAAAGTTGCAAAGCCTCCGTGTGAAGTTTTTGCGGCTTTTGCAAAAGTTGGGGCATTC 2476 Query 2421 GGCAGAAGATTCAATTGCAGCGCAGGTTCTTTACCGTCTTGCACTACTTGCTGGGAGACA 2480 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 2477 GGCAGAAGATTCAATCGCAGCGCAGGTTCTTTACCGTCTTGCACTACTTGCTGGGAGACA 2536 Query 2481 AGCAGGGCAGTTATTCAGTCTTGATGCTGCAAAGAAGAAGGCTGTGGAGTCTGAGGCTGA 2540 | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2537 AACAGGGCAGTTTTTCAGTCTTGATGCTGCAAAGAAGAAGGCTGTGGAGTCTGAGGCTGA 2596 Query 2541 GGGCAACGAAGAATTGATCTTCTCCCTAAACATACTGGTCCTTGGAAAAGCCGGGGTGGG 2600 |||||||||||| |||| |||||| |||||||||||||||||||||||||| |||||||| Sbjct 2597 GGGCAACGAAGATTTGAACTTCTCTCTAAACATACTGGTCCTTGGAAAAGCTGGGGTGGG 2656 Query 2601 AAAAAGTGCTACTATAAATTCCATTTTGGGAAACCAGATTGCGTCCATTGATGCTTTTGG 2660 |||||||||||||||||| |||||||||||||| |||| |||||||| ||||||||||| Sbjct 2657 AAAAAGTGCTACTATAAACTCCATTTTGGGAAATCAGAAGGCGTCCATCGATGCTTTTGG 2716 Query 2661 GCTCTCAACCACTTCGGTTAGAGAAATTTCTGGAACGGTGAATGGTGTCAAGATTACCTT 2720 ||||||||| |||||||||||||||||||||| ||| ||| |||||||||||||||||| Sbjct 2717 GCTCTCAACTACTTCGGTTAGAGAAATTTCTGAAACCGTGGGTGGTGTCAAGATTACCTT 2776 Query 2721 TATTGATACTCCGGGTTTGAAGTCTGCTGCGATGGATCAAAGTACAAATGCAAAAATGTT 2780 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 2777 TATTGATACTCCGGGTTTGAAGTCTGCTGCGATGGATCAAAGTGCAAATGCAAAAATGTT 2836 Query 2781 GTCCTCTGTAAAGAAGGTAATGAAGAAGTGTCCCCCTGATATTGTACTATATGTAGATCG 2840 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2837 GTCCTCTGTAAAGAAGGTAATGAAGAAGTGTCCCCCTGATATTGTACTATATGTAGATCG 2896 Query 2841 TCTTGACACCCAGACCAGGGACTTGAACAATTTGCCCTTGCTAAGGACGATTACTGCTTC 2900 ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| Sbjct 2897 TCTTGACACCCAGACAAGGGACTTGAACAATATGCCCTTGCTAAGGACGATTACTGCTTC 2956 Query 2901 TCTTGGTACATCCATATGGAAAAACGCTATAGTGACATTGACCCATGCGGCTTCTGCCCC 2960 |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 2957 TCTTGGTACATCAATATGGAAAAACGCTATAGTGACATTGACCCATGCTGCTTCTGCCCC 3016 Query 2961 TCCTGATGGCCCATCTGGCACCCCATTGAGCTATGATGTGTTTGTAGCGCAGTGCTCACA 3020 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 3017 TCCTGATGGCCCATCTGGCACCCCATTGAGCTATGATGTGTTTGTAGCACAGTGCTCACA 3076 Query 3021 TATTGTGCAACAGTCTATAGGACAGGCTGTTGGAGATCTACGCTTGATGAATCCAAGTCT 3080 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 3077 TATTGTGCAACAGTCTATAGGGCAGGCCGTTGGAGATCTACGCTTGATGAATCCAAGTCT 3136 Query 3081 GATGAATCCAGTTTCACTTGTTGAGAATCACCCCTTGTGTAGGAAGAACCGGGAGGGAGT 3140 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 3137 GATGAATCCAGTTTCTCTTGTTGAGAATCACCCCTTGTGTAGGAAGAACCGGGAGGGAGT 3196 Query 3141 GAAGGTTCTCCCGAATGGCCAAACTTGGAGATCTCAGCTGTTGCTATTGTGTTACTCCCT 3200 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 3197 GAAGGTTCTCCCGAATGGCCAAACTTGGAGACCTCAGCTGTTGCTATTGTGTTACTCCCT 3256 Query 3201 GAAGGTTTTGTCAGAAACAAATTCTCTATTGAGGCCTCAAGAACCATTGGACCATCGTAA 3260 |||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||| Sbjct 3257 GAAGGTTTTGTCAGAAGCAAATTCTCTATTGAAGCCTCAAGAACCATTGGATCATCGTAA 3316 Query 3261 AGTATTTGGTTTCCGAGTTAGATCCCCGCCTCTCCCTTACTTGTTGTCTTGGCTGTTGCA 3320 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct 3317 AGTATTTGGTTTCCGAGTTCGATCCCCGCCTCTCCCTTACTTGTTGTCTTGGCTGTTACA 3376 Query 3321 GTCCCGTGCACATCCTAAGCTCCCTGGAGACCAAGGTGGTGATAGTGTTGACTCTGATAT 3380 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3377 GTCCCGTGCACACCCTAAGCTCCCTGGAGACCAAGGTGGTGATAGTGTTGACTCTGATAT 3436 Query 3381 CGAAATTGATGATGTGTCTGATTCTGAGCAGGAAGATGGGGAAGATGATGAGTATGACCA 3440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3437 CGAAATTGATGATGTGTCTGATTCTGAGCAGGAAGATGGGGAAGATGATGAGTATGACCA 3496 Query 3441 GCTGCCACCATTTAAGCCTCTTCGAAAAACCCAACTTGCAAAGCTCTCAAATGAACAGAG 3500 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct 3497 GCTGCCACCATTTAAGCCTCTTCGAAAAACCCAACTTGCAAAACTCTCAAAGGAACAGAG 3556 Query 3501 AAAGGCATATTTCGAGGAGTATGATTACCGTGTAAAGCTCCTGCagaagaagcaatggag 3560 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 3557 AAAGGCATATTTCGAGGAGTATGATTACCGGGTAAAGCTCCTGCAGAAGAAGCAATGGAG 3616 Query 3561 agaggaattaaagaggatgaaagaaatgaagaaaaacgggaagaagCTGGGTGAAAGTGA 3620 ||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct 3617 AGAGGAATTGAAGAGGATGAAAGAAATGAAGAAAAACGGGAAGAAGGTGGGTGAGAGTGA 3676 Query 3621 GTTTGGTTATCCGGGAGAAGAAGATGATCCAGAAAACGGGGCTCCAGCTGCAGTGCCAGT 3680 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3677 GTTTGGTTATCTGGGAGAAGAAGATGATCCAGAAAACGGGGCTCCAGCTGCAGTGCCAGT 3736 Query 3681 TCCATTACCCGATATGGTTTTGCCACCTTCATTTGATAGTGATAACTCAGCTTACCGATA 3740 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3737 TCCATTACCCGATATGGTTTTGCCACCTTCATTTGATAGTGATAACTCAGCTTACCGATA 3796 Query 3741 CCGATATCTGGAACCCACTTCACAACTCCTAACCAGGCCAGTGTTGGATACCCATGGTTG 3800 ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 3797 CCGATTTCTGGAACCCACTTCACAACTCCTAACCAGGCCAGTGTTGGACACCCATGGTTG 3856 Query 3801 GGACCATGACTGTGGATATGACGGCGTCAATGCAGAACACAGTCTTGCTCTAGCTAG-CC 3859 |||||||||||||||||||||||||||||||||||||||||||||| || |||| || || Sbjct 3857 GGACCATGACTGTGGATATGACGGCGTCAATGCAGAACACAGTCTTACTGTAGC-AGGCC 3915 Query 3860 GGTTCCCTGCCACAGCTACTGTCCAAGTCACCAAGGACAAGAAAGAGTTCAACATTCATC 3919 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3916 GGTTCCCTGCCACAGCTACTGTCCAAGTCACCAAGGACAAGAAAGAGTTCAACATTCATC 3975 Query 3920 TGGACTCCTCTGTGTCTGCTAAGCACGGGGAGAATGGATCCACCATGGCAGGGTTCGATA 3979 |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 3976 TGGACTCCTCGGTGTCTGCTAAGCACGGCGAGAATGGATCCACCATGGCAGGGTTCGATA 4035 Query 3980 TTCAGAATGTAGGCAAGCAGCTGGCATATGTGGTCAGAGGAGAAACCAAATTCAAGAATT 4039 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || | Sbjct 4036 TTCAGAATGTAGGTAAGCAGCTGGCATATGTGGTCAGAGGAGAAACCAAATTCAAAAACT 4095 Query 4040 TGAGGAAGAACAAGACAACTGTTGGAGGGTCAGTGACATTCTTGGGAGAGAACATCGCCA 4099 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4096 TGAGGAAGAACAAGACAACTGTTGGAGGGTCAGTGACATTCTTGGGAGAGAACATCGCCA 4155 Query 4100 CTGGGGTCAAACTCGAGGACCAAATAGCACTGGGGAAAAGGTTGGTGCTTGTGGGCAGCA 4159 |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 4156 CTGGTGTCAAACTCGAGGACCAAATAGCACTGGGGAAAAGGTTTGTGCTTGTGGGCAGCA 4215 Query 4160 CTGGGACAATGCGATCACAGGGAGATTCGGCCTATGGTGCGAACCTCGAGGTCAGGCTTA 4219 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4216 CTGGGACAATGCGATCACAGGGAGATTCGGCCTATGGTGCGAACCTCGAGGTCAGGCTTA 4275 Query 4220 GGGAAGCTGATTTCCCAATTGGACAGGACCAATCTTCTTTTGGGCTGTCTCTGGTAAAGT 4279 |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| Sbjct 4276 GGGAAGCTGATTTCCCAATTGGACAGGACCAATCTTCTTTTGGGCTGTCTTTGGTGAAGT 4335 Query 4280 GGAGAGGCGATTTAGCCCTTGGAGCCAATCTCCAATCTCAAGTCTCTGTTGGAAGGAACT 4339 ||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct 4336 GGAGAGGTGATTTAGCCCTCGGAGCCAATCTCCAATCTCAACTCTCTGTTGGAAGGAACT 4395 Query 4340 CAAAGATTGCGCTTCGTGCAGGACTTAACAACAAGATGAGCGGACAGATCACAGTCAGAA 4399 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4396 CAAAGATCGCGCTTCGTGCAGGACTTAACAACAAGATGAGCGGACAGATCACAGTCAGAA 4455 Query 4400 CCAGCAGCTCGGATCAGTTGCAAATCGCTCTCACAGCCATTCTTCCAATTGCCATGTCCA 4459 |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| Sbjct 4456 CCAGCAGCTCGGATCAGTTGCAGATTGCTCTCACAGCCATTCTTCCAATTGCCATGTCCA 4515 Query 4460 TCTACAAGAGCATTCGACCCGAAGCGACGAACGACAAGTACAGCATGTACTAAATATGCT 4519 ||||||||||||||||||| |||||||| || |||||||||||||||||||||||||||| Sbjct 4516 TCTACAAGAGCATTCGACCAGAAGCGACAAATGACAAGTACAGCATGTACTAAATATGCT 4575 Query 4520 GATGAATGCTGCAGAATGATCTTTTCTTT-TATTACTGGTTTTTAGTTCATGTTTTTCCC 4578 |||||||||||| ||| |||||||| ||| ||||||||||||||||||||||||||| || Sbjct 4576 GATGAATGCTGCCGAAGGATCTTTTTTTTATATTACTGGTTTTTAGTTCATGTTTTTTCC 4635 Query 4579 CCACTTTAATAAAAACTTTGTTGAAGTTTATCAAAGTTGTATTTT 4623 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4636 CCACTTTAATAAAAACTTTGTTGAAGTTTATCAAAGTTGTATTTT 4680 Score = 641 bits (347), Expect = 0.0 Identities = 469/523 (90%), Gaps = 28/523 (5%) Strand=Plus/Plus Query 1 ATGGACTCAAAGTCGGTTACTCCAGAACCAACCAACCCCTTCTACGCTTCTTCGGGGCAA 60 |||||||| |||||||| |||||||||||||| ||||||||||||| ||||||| ||| Sbjct 21 ATGGACTCTAAGTCGGTAACTCCAGAACCAACGAACCCCTTCTACG---CTTCGGGCCAA 77 Query 61 TCAGGAAAAACCTATGCTTCTGTTGTCGCCGCCGCTGCTGCTGCAGCCGCCGATAAGGAG 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 78 TCAGGAAAAACCTATGCTTCTGTTGTCGCCGCCGCTGCTGCTGCAGCCGCCGATAAGGAG 137 Query 121 GATGGTGGTGCTGTGAGTAGTGCCAAGGAGTTGGATTCCTCATCGGAGGCTGTGTCTGGT 180 ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| Sbjct 138 GATGGTGGTGCTGTGAGTAGTGCCAAGGAGTTGGATTCCTCGTCGGAGGCTTTGTCTGGT 197 Query 181 AATTCGGATAAGGTTGGAGCTGATGATTTATCTGACTCCGAGAAGGAGAAGCCGAATTTG 240 ||||||||||||||||||||||||||||||||||| | | | |||||||||||||||| Sbjct 198 AATTCGGATAAGGTTGGAGCTGATGATTTATCTGA-T---A-A-GGAGAAGCCGAATTTG 251 Query 241 GTGGGTGATGGGAAGGTTTCCGACGAGGTGGATGGTTCTTTAAAGGAGGATTCTACTACT 300 | |||||| ||||| ||||| ||||||||||||| |||| | ||| | | Sbjct 252 GAGGGTGACGGGAAAGTTTCTGACGAGGTGGATGATTCT-----G-------CTA-T--T 296 Query 301 CCTGAGGCTACTCCGAAGCCTGAGGTGGTTTCTGGTGAGA-CAATTGGTGTAGATGATGT 359 |||||||||||||||||||||||||| ||||||| || || ||||||| | ||||| ||| Sbjct 297 CCTGAGGCTACTCCGAAGCCTGAGGTTGTTTCTGATG-GAACAATTGGGGAAGATGGTGT 355 Query 360 TTCATCGTTATCTCCGAAGCCGGAGGCTGTTTCTGATGGTGTAGGGGTTGTGGAGGAGAA 419 |||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 356 GTCATTGCTATCTCCGAAGCCGGAGGATGTTTCTGATGGTGTAGGGGTTGTGGAGGAGAA 415 Query 420 TAAGAAGGTTAAGGAGGACGTGGAGGATATTAAAGACGATGGTGAGAGTAAGATTGAAAA 479 ||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct 416 GAAGAAGGTTAATGAGGACGTGGAAGATAATAAAGACGATGGTGAGAGTAAGATTGAAAA 475 Query 480 TGGGAGTGTTGATGTTG-ATGTGAAACAGGCTTCCACAGATGG 521 ||||||||||||||||| | | |||||| |||||||||||||| Sbjct 476 TGGGAGTGTTGATGTTGGA-GAGAAACAAGCTTCCACAGATGG 517 > Ahg943479 jgi|Araly1|943479|scaffold_604023.1 Length=2881 Score = 1048 bits (567), Expect = 0.0 Identities = 1064/1300 (82%), Gaps = 49/1300 (4%) Strand=Plus/Plus Query 1876 AGG-GTTGATGGGTCTGAAAGTGAAGAAGAAACTGAAGAGATGATATTTGGGAGTTCTGA 1934 ||| |||| ||||||||||||||| ||||| ||| ||| ||||||| | |||||||| | Sbjct 791 AGGTGTTGTTGGGTCTGAAAGTGATGAAGACACTAAAGGGATGATAATAGGGAGTTCAAA 850 Query 1935 AGCTGCAAAACAGTTCTTAGCAGAGTTGGAAAAGGCTTCTTCTGGTA-T-AGAGGCACAT 1992 | ||| | |||||||||| | |||||||||| ||| ||||||||||| | | || | ||| Sbjct 851 ATCTGGAGAACAGTTCTTGGAAGAGTTGGAAGAGGTTTCTTCTGGTATTCA-AGTC-CAT 908 Query 1993 TCTGATGAAGCAAACATTTCTAACAAT-ATGTCAGATAGGATTGATGGCCAGATTGTCAC 2051 || |||||| |||||||| ||||| || | || |||||||||||| |||||||| |||| Sbjct 909 TCCGATGAAACAAACATTCCTAACCATCACGT-TGATAGGATTGATAGCCAGATTTTCAC 967 Query 2052 CGATTCTGACGAGGATGTAGACACAG-AGGATGAAGGTGAGGAGAAAA-TGTTTGATACT 2109 |||||||||||||| |||||||| | | ||||| | ||||||||||| | |||||| || Sbjct 968 TGATTCTGACGAGGAAGTAGACAC-GAATGATGACGTTGAGGAGAAAACT-TTTGATTCT 1025 Query 2110 GCAGCTTTGGCTGCGCTTT-TGAAGGCAGCCACTGGTGGTGGAAGTTCAGAAGGTGGCAA 2168 || |||||| ||||| ||| | ||||||||||| | ||||||||||||| ||||| || Sbjct 1026 GCGGCTTTGACTGCG-TTTCTAAAGGCAGCCAC---TAGTGGAAGTTCAGATGGTGGTAA 1081 Query 2169 TTTTACCATAACATCTCAGGATGGCACGAAGCTTTTCTCTATGGATCGACCTGCTGGTTT 2228 ||||||||| ||| ||||||| | ||||||||| |||||||| | | |||||| | Sbjct 1082 TTTTACCAT---ATCGCAGGATGTAATGAAGCTTTTTTCTATGGAACCTCAAGCTGGTCT 1138 Query 2229 GAGTTCATCGTTAAG-GCCCTTGAAGCCTGCAGCAGCTCCACGTGCAAACCGTTCCAACA 2287 | |||| || ||||| || || || | |||| |||| | |||| | |||||||| Sbjct 1139 GGGTTCCTCTTTAAGATTTGTTCAA-TCT-C--CAGCCCCACTTCCAAATCATTCCAACA 1194 Query 2288 TCTTTTCCAATTCT-AATG-TCACAAT-GGCAGATGAGACTGAGATTAACTTGAGCGAGG 2344 | |||||| | ||| || | ||| ||| || || |||| ||||| |||||||||||||| Sbjct 1195 T-TTTTCCCAGTCTAAAAGTTCA-AATGGGTGGA-GAGAGTGAGAATAACTTGAGCGAGG 1251 Query 2345 AAGAGAAACAGAAATTAGAAAAGTTGCAAAGCCTCCGTGTGAAGTTTTTGCGGCTTTTGC 2404 ||||||||||||| ||||||||||||||||| | ||||| || | |||||| ||| ||| Sbjct 1252 AAGAGAAACAGAAGTTAGAAAAGTTGCAAAGTATGCGTGTAAAATATTTGCGTCTTGTGC 1311 Query 2405 AAAGGTTGG-GTCATTCGGCAGAAGATTCAATTGCAGCGCAGGTTCTTTACCG-TCTTGC 2462 | ||||||| | || || | |||||||||||| |||| ||| || ||||| | |||||| Sbjct 1312 ATAGGTTGGAG-CAGTCTGTAGAAGATTCAATAGCAGTGCATGTGCTTTA-TGCTCTTGC 1369 Query 2463 ACTACTTGCTGGGAGACAAGCAGGGCAGTTATTCAGTCTTGATGCTGCAAAGAAGAAGGC 2522 | | ||| || |||||| | || ||||| ||||||||||| ||||||||||||| || Sbjct 1370 ATTTCTTACTTTGAGACATTCTGGTCAGTTGTTCAGTCTTGACGCTGCAAAGAAGATGGT 1429 Query 2523 TGTGGAGTCTGAGGCTGAGGGCAACGAAGAATT-GATCTTCTCCCTAAACATACTGGTCC 2581 | |||||||||||||| |||| || |||| || || ||||||||||||||| |||||| Sbjct 1430 TATGGAGTCTGAGGCTAAGGG-AA--AAGACTTAAAT-TTCTCCCTAAACATATTGGTCC 1485 Query 2582 TTGGAAAAGCCGGGGTGGGAAAAAGTGCTACTATAAATTCCATTTTGGGAAACCAGATTG 2641 |||||||| |||| ||||| ||||||||||| ||||||||||| ||||| | |||| | Sbjct 1486 TTGGAAAATCCGGAGTGGGGAAAAGTGCTACGATAAATTCCATCTTGGGTGATCAGAAGG 1545 Query 2642 CGTCCATTGATGCTTTTGGGCTC-TCAACCACTTCGGTTAGAGAAATTTCTGGAACGGTG 2700 | || ||| |||| ||| | | || |||||||||||| ||||||||||||||||||| Sbjct 1546 CATCTATTCATGCATTTCAAC-CATCCACCACTTCGGTTCTAGAAATTTCTGGAACGGTG 1604 Query 2701 AATGGTGTCAAGATTACCTTTATTGATACTCCGGGTTTGAAGTCTGCTGCGATGGATCAA 2760 |||||||||| | || | || || |||||||| || |||||| |||| ||||||||| Sbjct 1605 GGTGGTGTCAAGGTCACAATCATCGACACTCCGGGCTTAAAGTCTTCTGCCATGGATCAA 1664 Query 2761 AGTACAAATGCAAAAATGTTGTCCTCTGTAAAGAAGGTAATGAAGAAGTGTCCCCCTGAT 2820 || | ||| | ||||||||||| || || |||||| ||||||||||||||||||||||| Sbjct 1665 AGCGCCAATTCCAAAATGTTGTCTTCAGTGAAGAAGATAATGAAGAAGTGTCCCCCTGAT 1724 Query 2821 ATTGTACTATATGTAGATCGTCTTGACACCCAGACCAG-GGACTTGAACAATTTGCCCTT 2879 || || || ||||| ||||||||||| | |||| || || |||| ||||| ||||||| Sbjct 1725 ATGGTTCTTTATGTTGATCGTCTTGATGCTCAGAATAGAGG-CTTGGACAATATGCCCTT 1783 Query 2880 GCTAAGGACGATTACTGCTTCTCTTGGTACATCCATATGGAAAAACGCTATAGTGACATT 2939 |||||||||||||||||| ||||||||| ||||||||| ||||||||| |||||| ||| Sbjct 1784 GCTAAGGACGATTACTGCGTCTCTTGGTTCATCCATATTGAAAAACGCCATAGTGTTATT 1843 Query 2940 GACCCATGC-GGCTTCTGCCCCTCCTGATGGCCCATCTGGCACCCCATTGAGCTATGATG 2998 ||||||||| || || |||||||||||||||||| | || ||| || ||||||||||||| Sbjct 1844 GACCCATGCTGG-TTGTGCCCCTCCTGATGGCCCGTATGACACTCCTTTGAGCTATGATG 1902 Query 2999 TGTTTGTAGCGCAGTGCTCACATATTGTGCAACAGTCTATAGGACAGGCTGTTGGAGATC 3058 |||||||| ||||||||||||||||| ||||||||||| ||||| || ||||| |||| Sbjct 1903 CGTTTGTAGAACAGTGCTCACATATTGTTCAACAGTCTATTGGACATGCCGTTGGTGATC 1962 Query 3059 TACGCTTGATGAATCCAAGTCTGA-TGAATC-CAGTTTCACTTGTTGAGAATCACCCCTT 3116 |||||||||| || ||||| | | |||| | |||||| |||||||||||||| ||||| Sbjct 1963 TACGCTTGATAAACCCAAG-ATTAGTGAA-CAAAGTTTCTCTTGTTGAGAATCATCCCTT 2020 Query 3117 GTGTAGGAAGAACCGGGAGGGAGTGAAGGTTCTCCCGAAT 3156 ||||||||||||||||||||||||||||||||||| ||| Sbjct 2021 ATGTAGGAAGAACCGGGAGGGAGTGAAGGTTCTCCCAAAT 2060 Score = 296 bits (160), Expect = 9e-79 Identities = 202/222 (91%), Gaps = 3/222 (1%) Strand=Plus/Plus Query 3235 CCTCAAGAACCATTGGACCATCGTAAAGTATTTGGTTTCCGAGTTAGATCCCCGCCTCTC 3294 |||| |||| ||||||||||||||||| |||||||||||| |||| | | | ||||||| Sbjct 2088 CCTCTAGAAGCATTGGACCATCGTAAATTATTTGGTTTCCAAGTTCCAGCGCTGCCTCTC 2147 Query 3295 CCTTACTTGTTGTCTTGGCTGTTGCAGTCCCGTGCACATCCTAAGCTCCCTGGAGACCAA 3354 ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| Sbjct 2148 CCTAACTTGTTGTCTTGGCTGTTGCAGTCCCGTGCACATCCTAAGCTCCCTGCAGATCAA 2207 Query 3355 GGTGGTGATAGTGTTGACTCTGATATCGAAATTGATGATGTGTCTGATTCTGAGCAGGAA 3414 |||||||||||||| || |||| |||||||||||||| ||| ||||||||||||||||| Sbjct 2208 GGTGGTGATAGTGTCGATTCTGCTATCGAAATTGATG-TGT--CTGATTCTGAGCAGGAA 2264 Query 3415 GATGGGGAAGATGATGAGTATGACCAGCTGCCACCATTTAAG 3456 |||||||||||||| |||||||| |||||||||||||||||| Sbjct 2265 GATGGGGAAGATGACGAGTATGAACAGCTGCCACCATTTAAG 2306 Score = 202 bits (109), Expect = 2e-50 Identities = 273/349 (78%), Gaps = 23/349 (7%) Strand=Plus/Plus Query 3882 CCAAGTCACCAAGGACAAGAAAGAGTTCAACATTCATCTGGACTCCTCTGTGTCTGCTAA 3941 |||||| |||||||||||||||||||||||||||||||| ||||||||| | | |||||| Sbjct 2546 CCAAGTGACCAAGGACAAGAAAGAGTTCAACATTCATCTAGACTCCTCTATCTGTGCTAA 2605 Query 3942 GCACGGGGAGAATGGATCCACCATGGCAGGG-TTCGATATTCAG--AA-TGTAGGCAAGC 3997 ||||||||| |||||||| |||||||||||| || | ||| ||| || || || ||| | Sbjct 2606 GCACGGGGACAATGGATCTACCATGGCAGGGCTT-GTTATCCAGGGAAGTG-AG-CAA-C 2661 Query 3998 AGCTGGCATATGTGGTCAGAGGAGAAACCAAATTCAAGAATTTGAGGAAGAACAAGACAA 4057 || ||| | | | ||||||||||||||||||||| | ||||| ||| ||| | Sbjct 2662 TTATGT-ATACCT--TAAAAGGAGAAACCAAATTCAAGAACTCGAGGAGGAATGAGATGA 2718 Query 4058 CTGTTGGAGGG-TCAGTGACATTCTTGGGAGAGAACAT-CGCCACTGGGGTCAAACTCGA 4115 || |||||||| | |||||||||||| || | ||| || | ||| ||| |||||||||| Sbjct 2719 CTCTTGGAGGGCT-AGTGACATTCTTTGGTGGGAAAATTC-CCAGTGGTCTCAAACTCGA 2776 Query 4116 GGACCAAATAGCACTGGGGAAAA-GGTTGGTGCTTGTGGGCA--GCACTGGGACAATGCG 4172 | | || || || || ||||||| || | || || ||||| | ||| ||||| | | | Sbjct 2777 GAAACAGATCGC-CTTGGGAAAACGGGTCGTCCTCGTGGGAAATGCA--GGGACCACGAG 2833 Query 4173 ATCACAGGGAGATTCGGCCTATGGTGCGAA-CCTCGAGGTCAGGCTTAG 4220 ||||| ||||| || || |||| | ||| ||| |||||||||||||| Sbjct 2834 GTCACAAGGAGACTCAGCTTATGAAG-GAAACCTTGAGGTCAGGCTTAG 2881 > Ahg936070 jgi|Araly1|936070|scaffold_500261.1 Length=479 Score = 359 bits (194), Expect = 1e-97 Identities = 271/304 (89%), Gaps = 22/304 (7%) Strand=Plus/Plus Query 3802 GACCATGACTGTGGATATGACGGCGTCAATGCAGAACACAGTCTTGCTCTAGCTAGCCGG 3861 ||| ||||||||||||||||||||||||||||||||||||| | || || || | || Sbjct 120 GACAATGACTGTGGATATGACGGCGTCAATGCAGAACACAG---T-CT-TA-CT-GTTGG 172 Query 3862 T-TCCCTGCCACAGCTACTGTCCAAGTCACCAAGGACAAGAAAGAGTTCAACATTCATCT 3920 | ||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||| Sbjct 173 TATCCCTGCCACAGCTACTGTTCAAGTCACCAAGAACAAGAAAGAGTCCAACATTCATCT 232 Query 3921 GGACTCCTC-TGTGTCTGCTAAGCACGGGGAGAATGGATCCACCATGGCAGGGTTCGATA 3979 ||||||| | | |||||||||||||||| ||||||||||||||||||||| || | Sbjct 233 GGACTCCCCAT-TGTCTGCTAAGCACGGCGAGAATGGATCCACCATGGCA-GG---G--- 284 Query 3980 TTCAGAATGTAGGCAAGCAGCTGGCATATGTGGTCAGAGGAGAAACCAAATTCAAGAATT 4039 | |||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 285 --C---ATGTAGGCAAGCAGCTGGCATATGTGGTCAGAGGAGAAACCAAATTCAAGAACT 339 Query 4040 TGAGGAAGAACAAGACAACTGTTGGAGGGTCAGTGACATTCTTGGGAGAGAACATCGCCA 4099 ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 340 TGAGGAACAACAAGACAACTGTTGGAGGGTCAGTGACATTCTTAGGAGAGAACATCGCCA 399 Query 4100 CTGG 4103 |||| Sbjct 400 CTGG 403 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 179822032425 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5