BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT4G04340.2 Length=2790 Score E Sequences producing significant alignments: (Bits) Value Ahg943210 jgi|Araly1|943210|scaffold_603754.1 3720 0.0 Ahg492658 jgi|Araly1|492658|fgenesh2_kg.7__2091__AT4G22120.2 2134 0.0 > Ahg943210 jgi|Araly1|943210|scaffold_603754.1 Length=2359 Score = 3720 bits (2014), Expect = 0.0 Identities = 2244/2355 (95%), Gaps = 15/2355 (1%) Strand=Plus/Plus Query 235 AGCAAAAGTAACAAAGCATGGCAACACTTAAAGACATTGGTGTATCAGCAGGGATAAACA 294 ||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||| Sbjct 4 AGCAAAAGTGACAAATCATGGCAACACTTCAAGACATTGGTGTATCAGCAGGGATAAACA 63 Query 295 TCCTCACTGCATTCATTTTCTTCATAATCTTTGCGTTTTTAAGGCTTCAGCCATTCAACG 354 ||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||| Sbjct 64 TCCTCACTGCATTCATTTTCTTCATTATCTTTGCTTTTTTAAGACTTCAGCCATTCAACG 123 Query 355 ACAGAGTTTACTTCTCCAAATGGTACCTCAGGGGGTTAAGAAGCAGCCCTGCAAGTGGCG 414 |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct 124 ACAGAGTTTACTTCTCGAAATGGTACCTCAAGGGGTTAAGAAGCAGCCCTGCAAGTGGCG 183 Query 415 GCGGATTCGCGGGGCGGTTTGTGAATTTGGAGTTGAGATCATACCTCAAGTTCTTGCATT 474 | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 184 GTGGATTCGCGGGGCGGTTTGTGAATTTGGACTTGAGATCATACCTCAAGTTCTTGCATT 243 Query 475 GGATGCCTGAAGCTCTTAAGATGCCTGAGCGTGAGCTGATTGATCATGCTGGTTTAGACT 534 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct 244 GGATGCCTGAAGCTCTCAAGATGCCTGAGCGTGAGCTTATTGATCATGCTGGTTTAGACT 303 Query 535 CTGTTGTCTATCTCCGGATTTACTGGCTCGGGCTTAAGATTTTTGCTCCAATAGCAATGC 594 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 304 CTGTTGTCTATCTCCGGATTTACTGGCTCGGGCTTAAGATTTTTGCTCCAATAGCAATGC 363 Query 595 TTGCTTGGGCAGTTCTTGTACCGGTTAATTGGACAAACAACGAGTTGGAGTTGGCTAAGC 654 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 364 TTGCTTGGGCAGTTCTTGTACCGGTTAATTGGACGAACAACGAGTTGGAGTTGGCTAAGC 423 Query 655 ATTTTAAGAATGTGACTTCAAGTGATATTGACAAACTAACAATTTCGAATATCCCAGAAG 714 |||| |||||||| |||||||||||||| ||||| ||||||||||| ||||||||||| | Sbjct 424 ATTTAAAGAATGTTACTTCAAGTGATATCGACAAGCTAACAATTTCAAATATCCCAGA-G 482 Query 715 G-TTCAAATAGGTTTTGGGCTCATATCATAATGGCTTATGCCTTTACAATCTGGACTTGT 773 |||| |||||||||||||||| || |||||||||| ||||| ||||||||||||||| Sbjct 483 TCTTCACATAGGTTTTGGGCTCACATTGTAATGGCTTACGCCTTCACAATCTGGACTTGT 542 Query 774 TATATGCTGATGAAGGAGTATGAGACAGTTGCTAACATGAGGCTTCAGTTTCTTGCCTCA 833 |||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct 543 TATATGTTGATGAAGGAGTATGAGACAGTTGCTAATATGAGGCTTCAGTTTGTTGCCTCA 602 Query 834 GAAGGCCGTCGACCTGACCAGTTCACTGTTCTTGTTAGGAATGTACCTCCGGACCCAGAC 893 |||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct 603 GAAGCCCGTCGACCTGACCAGTTTACTGTTCTTGTTAGGAATGTACCTCCGGACCCCGAC 662 Query 894 GAAACTGTGAGTGAGCTTGTGGAGCATTTTTTCCTAGTTAATCACCCTGATAACTACCTC 953 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 663 GAAACTGTGAGTGAGCTTGTGGAGCATTTTTTCCTAGTCAATCACCCTGATAACTACCTC 722 Query 954 ACACATCAGGTTGTATGCAATGCAAACAAGCTCGCGGATTTGGTTAGTAAAAAGACGAAG 1013 |||||||||||||||| ||| |||||||||||||| ||||||||||||||||||| |||| Sbjct 723 ACACATCAGGTTGTATACAACGCAAACAAGCTCGCCGATTTGGTTAGTAAAAAGAAGAAG 782 Query 1014 CTGCAGAACTGGCTTGACTATTATCAGCTCAAATACACTAGAAATAATTCTCAGATCAGA 1073 |||||||| ||||||||||| |||||||||||||||||||||||||| ||||||| |||| Sbjct 783 CTGCAGAATTGGCTTGACTACTATCAGCTCAAATACACTAGAAATAACTCTCAGACCAGA 842 Query 1074 CCTATAACGAAGCTTGGGTGCCTTGGCTTGTGTGGACAAAAAGTTGACGCAATCGAACAT 1133 ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 843 CCTATTACGAAGCTTGGTTGCCTTGGCTTGTGTGGACAAAAAGTTGACGCAATCGAACAT 902 Query 1134 TACATTGCTGAAGTAGATAAAACATCAAAAGAGATTGCTGAAGAGAGAGAGAATGTGGTG 1193 |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| Sbjct 903 TACATTGCTGAAGTTGATAAAACATCAAAAGAGATTGCTGAAGAGAGGGAGAATGTGGTG 962 Query 1194 AATGATCAAAAGTCAGTCATGCCAGCATCTTTTGTCTCTTTCAAAACCCGTTGGGCTGCT 1253 ||||||||||||||| |||||||||| ||||||||||| ||||||| ||||||||||||| Sbjct 963 AATGATCAAAAGTCAATCATGCCAGCGTCTTTTGTCTCCTTCAAAAACCGTTGGGCTGCT 1022 Query 1254 GCTGTTTGCGCTCAGACCACGCAGACCCGAAACCCAACTGAATGGTTAACCGAATGGGCT 1313 |||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||| Sbjct 1023 GCTGTTTGCGCTCAGACCACACAGACCCGAAACCCAACCGAATGGCTAACCGAATGGGCT 1082 Query 1314 GCAGAGCCGCGTGATATATATTGGCCAAACCTAGCGATTCCATATGTTTCTTTGACTGTG 1373 ||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||| Sbjct 1083 GCAGAGCCGCGTGATGTGTATTGGCCAAACCTTGCGATTCCATATGTTTCTTTGACTGTA 1142 Query 1374 AGAAGATT-GGTTATGAATGTAGCCTTCTTCTTCCTTACCTTCTTTTTCATCATCCCTAT 1432 |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1143 AGAA-ATTTGGTTATGAATGTAGCCTTCTTCTTCCTTACCTTCTTTTTCATCATCCCTAT 1201 Query 1433 CGCGTTTGTACAATCTCTTGCTACCATTGAAGGAATTGAGAAAGTTGCACCGTTCTTGAA 1492 ||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||| Sbjct 1202 CGCGTTTGTACAATCTCTTGCTACCGTTGAGGGAATTGAGAAAGTTGCGCCGTTCTTGAA 1261 Query 1493 AGTCATTATCGAA-A-AAGATTTCATAAAATCGCTGATACAAGGTTTGCTAGCCGGTATT 1550 ||||||||||||| | || |||| |||||||||||||||||||| |||||||||||||| Sbjct 1262 AGTCATTATCGAAGATAA-ATTTG-TAAAATCGCTGATACAAGGTCTGCTAGCCGGTATT 1319 Query 1551 GCGTTGAAGCTTTTCCTCATCTTTCTGCCAGCCATACTGATGACCATGTCCAAATTTGAA 1610 | | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1320 GTGCTGAAGCTTTTCCTCATCTTTCTGCCAGGCATACTGATGACCATGTCCAAATTTGAA 1379 Query 1611 GGCTTTACTTCAGTTTCATTCTTAGAAAGACGATCCGCGTCTAGATATTACATCTTTAAC 1670 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1380 GGCTTTACTTCAGTTTCATCCTTAGAAAGACGATCCGCGTCTAGATATTACATCTTTAAC 1439 Query 1671 TTAGTGAACGTCTTTCTTGGAAGTGTTATCGCTGGAGCTGCGTTTGAGCAGCTTAACTCT 1730 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1440 TTAGTGAACGTCTTTCTTGGAAATGTTATCGCTGGAGCTGCGTTTGAGCAGCTTAACTCT 1499 Query 1731 TTCCTCAATCAATCGCCTAATCAAATCCCTAAGACTATTGGCATGGCGATACCGATGAAA 1790 ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1500 TTCCTCAATCAGTCGCCTAATCAAATCCCTAAGACAATTGGCATGGCGATACCGATGAAA 1559 Query 1791 GCAACCTTCTTTATCACATATATAATGGTTGATGGTTGGGCAGGAGTTGCAGGAGAGATT 1850 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1560 GCAACCTTCTTTATCACATATATAATGGTTGATGGTTGGGCAGGAGTTGCAGGAGAGATT 1619 Query 1851 CTTATGTTGAAACCTCTCATTATATACCACCTCAAAAACGCATTCTTGGTGAAAACAGAG 1910 |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1620 CTTATGTTAAAACCTCTCATTATATACCACCTCAAAAACGCACTCTTGGTGAAAACAGAG 1679 Query 1911 AAAGACAGAGAGGAAGCAATGAACCCGGGAAGCATCGGTTTCAACACTGGAGAGCCTCAG 1970 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1680 AAAGACAGAGAGGAAGCAATGAACCCGGGAAGCATCGGTTTCAACACTGGAGAGCCTCAG 1739 Query 1971 ATACAGCTTTACTTCCTTCTTGGTCTTGTCTATGCTCCTGTGACACCAATGCTTCTTCCT 2030 |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct 1740 ATACAGCTTTACTTCCTTCTCGGTCTTGTCTATGCTCCCGTGACACCAATGCTTCTTCCT 1799 Query 2031 TTTATCTTAGTCTT-TTTCGCTCTTGCTTATGTCGTATACCGCCATCAGATCATAAATGT 2089 ||||||||| |||| ||| || |||||||| |||||||| |||||||||||||||||||| Sbjct 1800 TTTATCTTAATCTTCTTT-GCGCTTGCTTACGTCGTATATCGCCATCAGATCATAAATGT 1858 Query 2090 GTATAATCAAGAGTATGAGAGCGCTGCTGCGTTTTGGCCGGATGTTCATGGACGGGTTAT 2149 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1859 GTATAATCAAGAGTATGAGAGCGCTGCTGCGTTTTGGCCAGATGTTCATGGACGGGTTAT 1918 Query 2150 AACGGCATTGATCATATCTCAGTTGCTTCTGATGGGTTTGTTAGGTACAAAACATGCCGC 2209 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1919 AACGGCATTGATCATATCTCAGTTGCTTCTGATGGGTTTGATAGGTACAAAACATGCCGC 1978 Query 2210 TTCAGCTGCTCCGTTTCTCATTGCTCTTCCTGTGATTACTATCGGTTTCCACCGCTTCTG 2269 || |||||| ||||||||||| |||||||| |||||||| ||| |||||||||||||||| Sbjct 1979 TTTAGCTGCACCGTTTCTCATCGCTCTTCCCGTGATTACCATCAGTTTCCACCGCTTCTG 2038 Query 2270 TAAAGGCCGTT-TCGAACCTGCCTTTGTCCGTTACCCCTTACAGGAAGCTATGATGAAAG 2328 ||||||||||| | ||||| |||||| |||| |||||||||||||||||||||||||||| Sbjct 2039 TAAAGGCCGTTAT-GAACCCGCCTTTATCCGATACCCCTTACAGGAAGCTATGATGAAAG 2097 Query 2329 ATACATTGGAAAGAGCAAGAGAGCCAAATCTGAACCTGAAAGGTTACTTGCAAGACGCTT 2388 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 2098 ATACATTGGAAAGAGCAAGAGAGCCTAATCTGAACCTGAAAGGTTACTTGCAAGACGCTT 2157 Query 2389 ATATTCATCCGGTTTTTAAAGGCGGTGATAATGATGACGACGGTGACATGATCGGAAAAT 2448 |||||||||| ||||| |||||||||||| || ||||||||||||||||| ||||||| Sbjct 2158 ATATTCATCCTGTTTTCAAAGGCGGTGAT---GACGACGACGGTGACATGATTGGAAAAT 2214 Query 2449 TGGAGAATGAAGTCATCATAGTGCCAACAAAACGCCAATCGCGGAGGAACACTCCTGCAC 2508 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct 2215 TGGAGAATGAAGTCATCATAGTGCCAACAAAACGCCAATCGCGGAGGAACACTCCCGCGC 2274 Query 2509 CGAGCAGAATCAGCGGTGAATCGTCTCCATCTTTGGCCGTTATTAACGGTAAAGAAGTCT 2568 | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2275 CAAGCCGAATCAGCGGTGAATCGTCTCCATCTTTGGCCGTTATTAACGGTAAAGAAGTCT 2334 Query 2569 AGTTTAACGGTTTCA 2583 |||||||| |||||| Sbjct 2335 AGTTTAACTGTTTCA 2349 > Ahg492658 jgi|Araly1|492658|fgenesh2_kg.7__2091__AT4G22120.2 Length=2920 Score = 2134 bits (1155), Expect = 0.0 Identities = 1970/2360 (83%), Gaps = 69/2360 (3%) Strand=Plus/Plus Query 252 ATGGCAACACTTAAAGACATTGGTGTATCAGCAGGGATAAACATCCTCACTGCATTCATT 311 ||||| |||||| | || |||||||||||||| ||||||||||| |||| |||||| || Sbjct 487 ATGGCGACACTTCAGGATATTGGTGTATCAGCTGGGATAAACATTCTCAGTGCATTTGTT 546 Query 312 TTCTTCATAATCTTTGCGT-TTTTAAGGCTTCAGCCATTCAACGACAGAGTTTACTTCTC 370 |||||||| |||||||| | |||| ||||||||||| ||||| || |||||||||||||| Sbjct 547 TTCTTCATCATCTTTGC-TATTTTGAGGCTTCAGCCTTTCAATGATAGAGTTTACTTCTC 605 Query 371 CAAATGGTACCTCAGGGGGTTAAGAAGCAGCCCTGCAAGTGGCGGCGGATTCGCGGGGCG 430 |||||||| |||| ||||||||||||||||||| | |||| |||| || ||| ||| Sbjct 606 AAAATGGTATCTCAAGGGGTTAAGAAGCAGCCCTTCGCGTGGTGGCGCCTTTGCGCAGCG 665 Query 431 GTTTGTGAATTTGGAGTTGAGATCATACCTCAAGTTCTTGCATTGGATGCCTGAAGCTCT 490 |||||||| |||| || || || || | ||||||||| |||||||||| || ||| | Sbjct 666 CTTTGTGAACCTGGACTTCAGGTCTTATGTGAAGTTCTTGAATTGGATGCCAGAGGCT-T 724 Query 491 T-AAGATGCCTGAGCGTGAGCTGATTGATCATGCTGGTTTAGACTCTGTTGTCTATCTCC 549 | ||||||||||||| |||||||||||||||||||||||| || || ||||| ||||||| Sbjct 725 TGAAGATGCCTGAGCCTGAGCTGATTGATCATGCTGGTTTGGATTCAGTTGTTTATCTCC 784 Query 550 GGATTTACTGGCTCGGGCTTAAGATTTTTGCTCCAATAGCAATGCTTGCTTGGGCAGTTC 609 ||||||||||||| ||||| ||||| ||||||||||||||| |||||||||||||||||| Sbjct 785 GGATTTACTGGCTGGGGCTGAAGATCTTTGCTCCAATAGCAGTGCTTGCTTGGGCAGTTC 844 Query 610 TTGTACCGGTTAATTGGACAAACAACGA-GTTGGAGTTGGCTAAGCATTTTAA-GAATGT 667 |||| || || || |||||||| ||| | ||||| ||||||| || ||| |||||| Sbjct 845 TTGTGCCAGTCAACTGGACAAATAAC-ACACTGGAGATGGCTAAACA-GCTAAGGAATGT 902 Query 668 GACTTCAAGTGATATTGACAAACTAACAATTTCGAATATCCCAGAAG-GTTCAAAT-AGG 725 ||||| || || ||||||||||| | |||| ||||| |||| || ||| ||| ||| Sbjct 903 AACTTCGAGCGACATTGACAAACTCTCTGTTTCAAATATTCCAG-AGTATTC-AATGAGG 960 Query 726 TTTTGGGCTCATATCA-TAATGGCTTATGCCTTTACAATCTGGACTTGTTATATGCTGAT 784 |||||| ||||||| | ||||||||||||||||||| ||||||||||||||| ||||||| Sbjct 961 TTTTGGACTCATAT-AGTAATGGCTTATGCCTTTACCATCTGGACTTGTTATGTGCTGAT 1019 Query 785 GAAGGAGTATGAGACAGTTGCTAACATGAGGCTTCAGTTTCTTGCCTCAGAAGGC-CGTC 843 ||| || ||||||||| |||||||||||||||| |||||| |||| || ||| || |||| Sbjct 1020 GAAAGAATATGAGACAATTGCTAACATGAGGCTCCAGTTTGTTGCATCTGAA-GCTCGTC 1078 Query 844 GACCTGACCAGTTCACTGTTCTTGTTAGGAATGTACCTCCGGACCCAGACGAAACTGTGA 903 |||||||||||||||||||||| ||||||||||||||||||||| |||| ||| |||| | Sbjct 1079 GACCTGACCAGTTCACTGTTCTGGTTAGGAATGTACCTCCGGACGCAGATGAATCTGTAA 1138 Query 904 GTGAGCTTGTGGAGCATTTTTTCCTAGTTAATCACCCTGATAACTACCTCACACATCA-G 962 |||| || ||||||||||||||||| || ||||| |||||| ||||||| |||||||| | Sbjct 1139 GTGAACTGGTGGAGCATTTTTTCCTGGTCAATCATCCTGATCACTACCTGACACATCAGG 1198 Query 963 -----GTTGTATGCAATGCAAACAAGCTCGCGGATTTGGTTAGTAAA-AAGACGAAGCTG 1016 ||||||||||||||||||||||| || |||||||| | ||| |||| |||||| Sbjct 1199 CAAATGTTGTATGCAATGCAAACAAGCTTGCCGATTTGGTGA-AAAAGAAGAAAAAGCTG 1257 Query 1017 CAGAACTGGCTTGACTATTATCAGCTCAAATACACTA-GAAATAATTCTCAGATCAGACC 1075 ||||| |||||||| || || |||||||||||| ||| |||| || |||||| ||| Sbjct 1258 CAGAATTGGCTTGATTACTACCAGCTCAAATACGCTAGGAAA-AACTCTCAG---AGAAT 1313 Query 1076 TATAACGAAGCTTGGGTGCCTT-GGCTTGTGTGGACAAAAAGTTGACGCAATCGAACATT 1134 ||| ||||||||| | ||| ||| | || ||||||||||| || || || ||||||| Sbjct 1314 TATGGTGAAGCTTGGCTTTCTTGGGC-TATGGGGACAAAAAGTCGATGCCATTGAACATT 1372 Query 1135 ACATTGCTGAAGTAGATAAAACATCAAAAGAGAT-TGCTGAAGAGAGAGA-GAATGTGGT 1192 ||||||||||| | || |||| |||||||||||| | | |||| ||||| ||| ||||| Sbjct 1373 ACATTGCTGAAATTGACAAAATATCAAAAGAGATCAG-TAAAGAAAGAGAGGAA-GTGGT 1430 Query 1193 GAATGATCAAAAGT-CAGTCATGCCAGCAT-CTTTTGTCT-CTTTCAAAACCCGTTGGGC 1249 |||||||| |||| || | |||||||| | | ||||||| |||| |||||||| ||||| Sbjct 1431 GAATGATCCCAAGTCCA-TTATGCCAGC-TGCATTTGTCTCCTTT-AAAACCCGATGGGC 1487 Query 1250 TGCTGCTGTTTGCGCTCAGAC-CACGCAGACCCGAAACCCAACTGAATGGTTAACCGAAT 1308 |||||||||||| |||||||| || ||||||||||||||||| | ||| | ||||||| Sbjct 1488 TGCTGCTGTTTGTGCTCAGACTCA-ACAGACCCGAAACCCAACCCAGTGGCTGACCGAAT 1546 Query 1309 GGGCTGCAGAGCCGCGTGATATATATTGGCCAAACCTAGCGATTCCATATGTTTCTTTGA 1368 ||||| |||| ||||||||| | | |||| |||| || || ||||||||||||||||||| Sbjct 1547 GGGCTCCAGAACCGCGTGATGTGTTTTGGTCAAATCTTGCTATTCCATATGTTTCTTTGA 1606 Query 1369 CTGTGAGAAGATTGGTTATGAATGTAGCCTTCTTCTTCCTTACCTTCTTTTTCATCATCC 1428 | || || || || | ||| |||| |||||||||||||| |||||||| ||||| |||| Sbjct 1607 CAGTAAGGAGGTTAATCATGCATGTTGCCTTCTTCTTCCTAACCTTCTTCTTCATTATCC 1666 Query 1429 CTATCGCGTTTGTACAATCTCTTGCTACCATTGAAGGAATTGAGAAAGTTGCACCGTTCT 1488 | ||||||||||| ||||||||||||||||||||||| |||| ||||| ||| ||||||| Sbjct 1667 CCATCGCGTTTGTTCAATCTCTTGCTACCATTGAAGGGATTGTGAAAGCTGCTCCGTTCT 1726 Query 1489 TGAAAG-TCATTATCGA--AAAAGATTTCATAAAATCGCTGATACAAGGTTTGCTAGCC- 1544 || ||| | ||| | || | || | ||||| |||||| ||||||||||||| ||| || Sbjct 1727 TG-AAGTTTATTGTAGAGGATAA-A-TTCATGAAATCGGTGATACAAGGTTTTCTA-CCG 1782 Query 1545 GGTATTGCGTTGAAGCTTTTCCTCATCTTTCTGCCAGCCATACTGATGACCATGTCCAAA 1604 ||||| || ||||| |||||||| |||||||||| |||| |||||| |||||||||| Sbjct 1783 GGTATCGCACTGAAGATTTTCCTCGCCTTTCTGCCATCCATTCTGATGGTCATGTCCAAA 1842 Query 1605 TTTGAAGGCTTTACTTCAG-TTTCATTC-TTAGAAAGACGATCCGCGTCTAGATATTACA 1662 ||||||||||| || || | | ||| || ||||| |||||| | |||| | ||||||||| Sbjct 1843 TTTGAAGGCTTCACATC-GATCTCA-TCTTTAGAGAGACGAGCAGCGTTTCGATATTACA 1900 Query 1663 TCTTTAACTTAGTGAACGTCTTTCTTGGAAGTGTTATCGCTGGAGCTGCGTTTGAGCAGC 1722 |||| ||||| |||||||||||||||| |||||||||| ||||||||||||| || |||| Sbjct 1901 TCTTCAACTTGGTGAACGTCTTTCTTGCAAGTGTTATCACTGGAGCTGCGTTCGAACAGC 1960 Query 1723 TTAACTCTTTCCTCAATCAATCGCCTAATCAAATCCCTAAGACTATTGGCATGGCGATAC 1782 |||||||||||||||||||||| || || |||||||| || || ||||| ||||||||| Sbjct 1961 TTAACTCTTTCCTCAATCAATCCCCAAACCAAATCCCCAAAACCATTGGTGTGGCGATAC 2020 Query 1783 CGATGAAAGCAACCTTCTTTATCACATATATAATGGTTGATGGTTGGGCAGGAGTTGCAG 1842 ||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct 2021 CGATGAAAGCAACTTTCTTCATCACGTATATAATGGTTGATGGTTGGGCAGGAGTTGCAG 2080 Query 1843 GAGAGATTCTTATGTTGAAACCTCTCATTATATACCACCTCAAAAACGCATTCTTGGTGA 1902 |||||||||| ||| ||||||| || ||||| | ||| ||||||||||| |||||||| | Sbjct 2081 GAGAGATTCTAATGCTGAAACCACTGATTATGTTCCATCTCAAAAACGCCTTCTTGGTTA 2140 Query 1903 AAACAGAGAAAGACAGAGAGGAAGCAATGAACCCGGGAAGCATCGGTTTCAACACTGGAG 1962 | || |||||||||||||| ||||||||| ||||||||||||||||||| ||||| || | Sbjct 2141 AGACTGAGAAAGACAGAGAAGAAGCAATGGACCCGGGAAGCATCGGTTTTAACACAGGCG 2200 Query 1963 AGCCTCAGATACAGCTTTACTTCCTTCTTGGTCTTGTCTATGCTCCTGTGACACCAATGC 2022 |||||| ||||||||| ||||| ||||| ||||||||||| ||||| |||||||| |||| Sbjct 2201 AGCCTCGGATACAGCTCTACTTTCTTCTCGGTCTTGTCTACGCTCCCGTGACACCGATGC 2260 Query 2023 TTCTTCCTTTTATCTTAGTCTTTTTCGCTCTTGCTTATGTCGTATACCGCCATCAGATCA 2082 |||||||||||||||||||||| ||||| |||||||| | || || ||||| || |||| Sbjct 2261 TTCTTCCTTTTATCTTAGTCTTCTTCGCCCTTGCTTACATTGTGTATCGCCACCAAATCA 2320 Query 2083 TAAATGTGTATAATCAAGAGTATGAGAGCGCTGCTGCGTTTTGGCCGGATGTTCATGGAC 2142 | || || || || ||||| || ||||||||||| ||||||||||| || |||||||||| Sbjct 2321 TTAACGTATACAACCAAGAATACGAGAGCGCTGCAGCGTTTTGGCCAGACGTTCATGGAC 2380 Query 2143 GGGTTATAACGGCATTGATCATATCTCAGTTGCTTCTGATGGGTTTGTTAGGTACAAAAC 2202 | || ||| ||||||| || ||||| |||||||||||||||||| | || || ||||| | Sbjct 2381 GAGTCATAGCGGCATTAATAATATCACAGTTGCTTCTGATGGGTCTATTGGGAACAAAGC 2440 Query 2203 ATGCCGC-TTCAGCTGCTCCGTTTCTCATTGCTCTT-CCTGTGATTACTATCGGTTTCCA 2260 | || || || |||||| || |||||||||||| || |||||| |||| ||||||||||| Sbjct 2441 ACGCTGCATT-AGCTGCACCTTTTCTCATTGCT-TTGCCTGTGCTTACCATCGGTTTCCA 2498 Query 2261 CCGCTTCTGTAAAGGCCGTT-TCGAACCTGCCTTTGTCCGTTACCCCTTACAGGAAGCTA 2319 || |||||| ||||| |||| | || || ||||| || | ||||| ||||||||||||| Sbjct 2499 CCACTTCTGCAAAGGTCGTTAT-GAGCCAGCCTTCATCAGATACCCTTTACAGGAAGCTA 2557 Query 2320 TGATGAAAGATACATTGGAAAGAGCAAGAGAGCCAAATCTGAACCTGAAAGGTTACTTGC 2379 |||||||||||||||||||||| |||||||| ||||| || ||||| ||||| ||||||| Sbjct 2558 TGATGAAAGATACATTGGAAAGCGCAAGAGAACCAAACCTCAACCTTAAAGGCTACTTGC 2617 Query 2380 AAGACGCTTATATTCATCCGGTTTTTAAAGGCGGTGATA-ATGATGACGACG--G-TGAC 2435 || | ||||| |||||||| ||||| ||||||| ||| | | ||||| ||| | |||| Sbjct 2618 AAAATGCTTACATTCATCCAGTTTTCAAAGGCGATGA-AGACGATGATGACATTGATGAC 2676 Query 2436 ATGATCGGAAAATTGGAGAATGAAGTCATCATAGTGCCAACAAAACGCCAATCGCGGAGG 2495 | | |||| || || ||| |||||| |||||| || || || ||||| || |||||||| Sbjct 2677 AAGCTCGGGAAGTTTGAGGATGAAGCCATCATTGTTCCCACCAAACGTCAGTCGCGGAGA 2736 Query 2496 AACACTCCTGCACCGAGCAGAATCAGCGGTGAATCGTCTCCATCTTTGGCCGTTATTAAC 2555 || ||||| || || ||||||||||| || ||| || || |||||| || ||| | Sbjct 2737 AATACTCCGGCTCCTAGCAGAATCAGTGGGGAAGATTCGCCGTCTTTGCCCTTTAGT--- 2793 Query 2556 GGTAAAGAAGTCTAGTTTAA 2575 |||||| |||||||| ||| Sbjct 2794 GGTAAACTAGTCTAGTCTAA 2813 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 105281437180 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5