BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT4G08570.1 Length=1091 Score E Sequences producing significant alignments: (Bits) Value Ahg894990 jgi|Araly1|894990|Al_scaffold_0006_2986 715 0.0 > Ahg894990 jgi|Araly1|894990|Al_scaffold_0006_2986 Length=453 Score = 715 bits (387), Expect = 0.0 Identities = 431/453 (95%), Gaps = 0/453 (0%) Strand=Plus/Plus Query 96 ATGGGAGTGGAAGGAACGATGGAGTATATATCAGACCTTTTAaagaagaggaagaggaag 155 ||||||||||||||||| |||||||||||||| ||| |||| |||||||||||||||||| Sbjct 1 ATGGGAGTGGAAGGAACTATGGAGTATATATCGGACTTTTTGAAGAAGAGGAAGAGGAAG 60 Query 156 aagaagaagCAAATGCAAACAGTAGCTCTCCGTGTTGCTCGTATCGACTGCGAAGGCTGT 215 |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct 61 AAGAAGAAGCAACTGCAAACAGTAGCTCTCCGAGTTGCTCGTATCGACTGCGAAGGTTGT 120 Query 216 GAACGTAAGATCAAACATGTCCTCTCCGGTGTCAAAGGGGTGAAGTCAGTGGACGTGGAC 275 |||||||||||||||||| |||||||||||||||||| |||||||||||||||||| ||| Sbjct 121 GAACGTAAGATCAAACATATCCTCTCCGGTGTCAAAGAGGTGAAGTCAGTGGACGTAGAC 180 Query 276 GTAAAGCTGCAGAAGGTAACGGTAACGGGATATATAGACCCAAAGAAGGTTTTGGAGGCT 335 || |||||||| |||||||||||||||||||||||||| || ||||||||||||||||| Sbjct 181 GTGAAGCTGCAAAAGGTAACGGTAACGGGATATATAGAGCCGAAGAAGGTTTTGGAGGCG 240 Query 336 GCCAAGTCAACGAAGAAGAAAGTGGAGTTATGGCCGTACGTTCCTTACACAATGGTGGCG 395 |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct 241 GCCAAGTCAACGAAGAAGAAAGTGGAGTTATGGCCGTATGTTCCTTACACGATGGTGGCG 300 Query 396 AATCCGTACATATCTCAGGCGTATGACAAGAAGGCACCACCAAACATGGTTCGGAAAGTC 455 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 AATCCGTACATATCTCAGGCGTATGACAAGAAGGCACCACCAAACATGGTTCGGAAAGTC 360 Query 456 CCCGACACGGCCTCTGTCAACGAGACCACCGTCGATGACTCTTACACTATTATGTTTAGC 515 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 361 CCCGACACGGCCTCTGTCAACGAGACCACCGTCGATGACTCTTACACCATTATGTTTAGC 420 Query 516 GACGAGAACCCTAATTCTTGCGCTATCATGTAG 548 || ||||| |||||||||||| |||||||||| Sbjct 421 GATGAGAATCCTAATTCTTGCATTATCATGTAG 453 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 40639029522 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5