BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT4G09510.1 Length=2032 Score E Sequences producing significant alignments: (Bits) Value Ahg489803 jgi|Araly1|489803|fgenesh2_kg.6__2937__AT4G09510.1 3038 0.0 Ahg922723 jgi|Araly1|922723|scaffold_104004.1 1315 0.0 Ahg316170 jgi|Araly1|316170|fgenesh1_pm.C_scaffold_2001203 721 0.0 > Ahg489803 jgi|Araly1|489803|fgenesh2_kg.6__2937__AT4G09510.1 Length=2039 Score = 3038 bits (1645), Expect = 0.0 Identities = 1919/2049 (94%), Gaps = 27/2049 (1%) Strand=Plus/Plus Query 1 GTTTTGTATTCTTCTTCCTTACTTCTT-ATTCTATCTATAAAACAACAACTTCACTCATC 59 |||||||||||||||||||||||| || | |||||||||||||||||||||||||||||| Sbjct 1 GTTTTGTATTCTTCTTCCTTACTTGTTCA-TCTATCTATAAAACAACAACTTCACTCATC 59 Query 60 ATGACTCTTTTTCCCCATTTTCTTACTCTCTTGCCCTTTCTTCTCTCACTCTCCGGCG-A 118 |||||||||||| ||| |||||||||||| |||||| ||||||||||||||||||||| | Sbjct 60 ATGACTCTTTTTTCCCGTTTTCTTACTCTTTTGCCCCTTCTTCTCTCACTCTCCGGCGAA 119 Query 119 CT-G-TTACGAGTTTTTAACACTTCCGTCGTCTTCTCAGTTGTTGTTGTTG-TT-T-A-T 172 | | ||||||||| ||||||||||||||||||||||||||||||||| || | | | Sbjct 120 ATCGCCGGCGAGTTTTTGACACTTCCGTCGTCTTCTCAGTTGTTGTTGTTGTTTATGACT 179 Query 173 G-A-C-A-AGATCTTGTTCTATCCATTAAAACCAAAGAAATGGAGGAAGGTCATAAAGAA 228 | | | | |||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct 180 GAACCTATAGATCTTGTTCTATCCATTAAAACCAAATAAAT---GGAAGGTCATAAAGAA 236 Query 229 CCATTGGT-GCTAAGAGTTGAAGGATCACATTGTTCTTTATCAGAGATGGATGATTTTGA 287 ||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 237 CCATT-GTGGCTAAGAGTTGAAGGATCACATTGTTCATTATCAGAGATGGATGATTTTGA 295 Query 288 TCTAACTCGGGCTTTAGAGAAGCCGAGGCAGCTAAAGATCGAACGGAAGAGATCGTTTGA 347 ||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||| Sbjct 296 TCTAACTCGGGCTTTGGAGAAGCCGAGGCAGCTAAAGATTGAACGGAAGAGATCATTTGA 355 Query 348 CGAAAGGTCGATGAGCGAGTTATCGACTGGCTATGTAAGACAAGATAGCATTTTAGAAAT 407 ||||| || ||||||||||||||||||||||||| ||||||||| |||||||||||||| Sbjct 356 TGAAAGATCAATGAGCGAGTTATCGACTGGCTATGCAAGACAAGACAGCATTTTAGAAAT 415 Query 408 GGCTCATTCTCCTGGAAGTAGGTCAATGGTGGACACTCCTCTCTCTGTTAGGAACTCTTT 467 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 416 GGCTCATTCTCCTGGAAGTAGGTCAATGGTGGACACTCCTCTCTCTGTTAGGAACTCGTT 475 Query 468 CGAGCCTCATCCGATGGTTGCTGAGGCTTGGGAAGCTTTGAGAAGGTCAATGGTGTTCTT 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 476 CGAGCCTCATCCGATGGTTGCTGAGGCTTGGGAAGCTTTGAGAAGGTCAATGGTGTTCTT 535 Query 528 TCGTGGTCAACCCGTTGGTACCATTGCAGCTTATGACCATGCCTCCGAGGAGGTCTTGAA 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 536 TCGTGGTCAACCCGTTGGTACCATTGCAGCTTATGACCATGCCTCCGAGGAGGTCTTGAA 595 Query 588 CTATGATCAGGTGTTTGTACGTGACTTTGTACCAAGTGCATTGGCGTTTCTGATGAATGG 647 ||||||||||||||| ||||| ||||||||||| ||||||||||| |||||||||||||| Sbjct 596 CTATGATCAGGTGTTCGTACGAGACTTTGTACCGAGTGCATTGGCATTTCTGATGAATGG 655 Query 648 AGAGCCCGATATAGTGAAAAACTTCTTGCTCAAGACACTTCAGCTTCAAGGTTGGGAGAA 707 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 656 AGAGCCAGATATAGTGAAAAACTTCTTGCTCAAGACACTTCAGCTTCAAGGTTGGGAGAA 715 Query 708 ACGGGTTGACCGGTTCAAGCTTGGGGAAGGCGTTATGCCAGCGAGTTTCAAGGTGCTTCA 767 ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct 716 ACGGGTTGACCGGTTCAAGCTCGGGGAAGGTGTTATGCCAGCGAGTTTCAAGGTGCTTCA 775 Query 768 TGATCCAGTTCGTAAAACCGACACAATTATTGCGGATTTTGGAGAAAGCGCTATAGGAAG 827 ||||||||| ||||||||||||||||| |||||||||| || ||||||||||||||||| Sbjct 776 TGATCCAGTCCGTAAAACCGACACAATCGTTGCGGATTTCGGGGAAAGCGCTATAGGAAG 835 Query 828 AGTAGCACCGGTGGATTCAGGATTCTGGTGGATCATACTTCTCCGTGCTTACACGAAATC 887 ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct 836 AGTAGCACCGGTGGATTCAGGATTCTGGTGGATCATACTTCTCCGCGCTTACACAAAATC 895 Query 888 TACGGGAGATTTGACTTTATCTGAGACACCAGAGTGTCAGAGGGGAATGAGGCTTATACT 947 ||| |||||||||||| | |||||||||||||||||||||||||||||| |||||||||| Sbjct 896 TACCGGAGATTTGACTCTGTCTGAGACACCAGAGTGTCAGAGGGGAATGCGGCTTATACT 955 Query 948 CTCTCTTTGCTTATCCGAAGGTTTTGATACTTTCCCTACGCTTCTTTGTGCTGACGGTTG 1007 ||| || |||||||||||||| ||||| ||||||||||| || ||||||||||||||||| Sbjct 956 CTCACTCTGCTTATCCGAAGGGTTTGACACTTTCCCTACACTGCTTTGTGCTGACGGTTG 1015 Query 1008 TTCTATGGTTGATAGGAGAATGGGTGTTTATGGATATCCAATAGAGATTCAAGCTCTGTT 1067 ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1016 TTCTATGGTTGATAGAAGAATGGGTGTTTATGGATATCCGATAGAGATTCAAGCTCTGTT 1075 Query 1068 TTTCATGGCATTGAGATGCGCCTTGTCGATGCTTAAACCAGACGAGGAAGGTCGAGATTT 1127 ||||||||| ||||||||||||| |||||||||||||| |||||||||||| |||| || Sbjct 1076 TTTCATGGCGCTGAGATGCGCCTTATCGATGCTTAAACCTGACGAGGAAGGTAGAGAGTT 1135 Query 1128 CATAGAAAGGATTGTGAAGAGACTTCACGCGCTGAGTTTCCATATGCGCAGTTACTTTTG 1187 ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1136 CATAGAAAGAATTGTGAAGCGACTTCACGCGCTGAGTTTCCATATGCGCAGTTACTTTTG 1195 Query 1188 GCTTGACTTTCAACAACTCAACGATATCTATAGGTACAAGACAGAGGAGTACTCACACAC 1247 ||| |||||||| |||||||| |||||||| ||||||||||| ||||||||||||||||| Sbjct 1196 GCTCGACTTTCAGCAACTCAATGATATCTACAGGTACAAGACGGAGGAGTACTCACACAC 1255 Query 1248 CGCGGTGAACAAGTTCAACGTGATGCCGGACTCGATACCAGACTGGGTTTTCGACTTTAT 1307 ||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| || Sbjct 1256 GGCGGTGAACAAATTCAACGTGATGCCGGACTCGATACCAGATTGGGTTTTTGACTTCAT 1315 Query 1308 GCCTCTCCGTGGAGGATATTTTGTCGGCAATGTAAGCCCGGCCCGTATGGATTTCAGGTG 1367 |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1316 GCCTCTTCGTGGAGGATATTTTGTCGGCAATGTAAGCCCGGCCCGTATGGATTTTAGGTG 1375 Query 1368 GTTTTCCTTAGGAAATTGTGTCTCCATCCTTTCTTC-CTTGGCAACTCCGGATCAGTCAA 1426 ||||||||||||||| |||||||| ||||||||||| || | |||||||||||||||||| Sbjct 1376 GTTTTCCTTAGGAAACTGTGTCTCTATCCTTTCTTCTCTAG-CAACTCCGGATCAGTCAA 1434 Query 1427 TGGCTATTATGGACCTCCTCGAGCACCGTTGGGAGGAGCTAGTAGGCGAGATGCCGCTCA 1486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1435 TGGCTATTATGGACCTCCTCGAGCACCGTTGGGAGGAGCTAGTAGGCGAGATGCCGCTTA 1494 Query 1487 AGATATGTTACCCTTGCATCGAAAGCCACGAGTGGCGGATTGTTACCGGTTGTGATCCTA 1546 ||||||| ||||||||||| || |||||||||||||||||||| || ||||||||||||| Sbjct 1495 AGATATGCTACCCTTGCATTGAGAGCCACGAGTGGCGGATTGTCACTGGTTGTGATCCTA 1554 Query 1547 AAAACACGAGGTGGAGTTACCACAACGGTGGATCTTGGCCAGTATTGCTGTGGACGCTGA 1606 | ||||| |||||||| ||||||||||| ||||||||||||||||| |||||||||||| Sbjct 1555 AGAACACTAGGTGGAGCTACCACAACGGCGGATCTTGGCCAGTATTATTGTGGACGCTGA 1614 Query 1607 CGGCGGCATGCATCAAGACTGGACGGCCTCAAATAGCGAGACGTGCGATTGATCTAATTG 1666 | ||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||| Sbjct 1615 CAGCGGCATGCATCAAGACAGGCCGGCCTCAAATCGCGAGACGTGCGATTGATCTAATTG 1674 Query 1667 AATCACGGCTACACCGAGATTGCTGGCCGGAATACTATGATGGTAAGCAAGGAAGGTACG 1726 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1675 AATCACGGCTACACCGAGATTGCTGGCCGGAATACTATGATGGTAAGCAAGGAAGGTACG 1734 Query 1727 TTGGAAAACAAGCAAGGAAGTACCAGACTTGGTCAATCGCGGGTTACTTGGTTGCGAAAA 1786 |||||||||| || ||||| |||||||||||||||||||||||||||||||||||||| | Sbjct 1735 TTGGAAAACAGGCTAGGAAATACCAGACTTGGTCAATCGCGGGTTACTTGGTTGCGAAGA 1794 Query 1787 TGATGCTTGAAGATCCTTCACATATTGGAATGATCTCTCTTGAAGAAGACAAACAGATGA 1846 ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct 1795 TGATGCTTGAAGATCCTTCACATATCGGAATGATCTCTCTTGAAGAAGATAAACAGATGA 1854 Query 1847 AACCTGTTATCAAGAGATCTGCTTCATGGACTTGCTGAATTTTGTTTCTTGTTTTGTATT 1906 ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| Sbjct 1855 AACCTGTTATCAAGAGATCTGCTTCTTGGACTTGCTGATTTTTGTTTCTTGTTTTGTATT 1914 Query 1907 ATAA-TGTCATTTGATTAAGCA-TT-CAAAAGACCTTTAATCAGCGAGAGAGTAGTTCTG 1963 |||| | ||||| |||||| | || ||||||||||||||||||| ||||| |||||||| Sbjct 1915 ATAAATTTCATT--ATTAAG-AGTTGCAAAAGACCTTTAATCAGCCAGAGAATAGTTCTG 1971 Query 1964 TTTGTATTTCTCTTTGATCCAACTATGGTTTATTTTCACTTGAGGCATAATATAATCTCT 2023 || | | |||||||||||||||||||| |||||||| ||||||||| ||||||||||||| Sbjct 1972 TT-GCACTTCTCTTTGATCCAACTATGATTTATTTTAACTTGAGGCTTAATATAATCTCT 2030 Query 2024 TCCTAGATC 2032 | ||||||| Sbjct 2031 TTCTAGATC 2039 > Ahg922723 jgi|Araly1|922723|scaffold_104004.1 Length=1698 Score = 1315 bits (712), Expect = 0.0 Identities = 1359/1666 (82%), Gaps = 65/1666 (4%) Strand=Plus/Plus Query 238 CTAAGAGTTGAAGGATCACATTGTTCTTTATCAGAGATGGATGATTTTGATCTAACTCGG 297 ||||||| || |||||||| ||||||||||| |||||||||||| ||||| | ||||| Sbjct 36 CTAAGAGCTGTGGGATCACACTGTTCTTTATCTGAGATGGATGATCTTGATTTGACTCGA 95 Query 298 GCTTTAGAGAAGCCGAGGCAGCTAAAGATCGAACGGAAGAGATCGTTTGACGAAAGGTCG 357 ||||| || || || | | | | ||||| ||| |||||||||||||||| || |||||| Sbjct 96 GCTTTGGATAAACC-AAG-A-TTGAAGATTGAAAGGAAGAGATCGTTTGATGAGAGGTCG 152 Query 358 ATGAGCGAGTTATCGACTGGCTAT-GTAAGACAAGATAGCATTTTAGAAATGGCTCATTC 416 ||||| || ||||||||||| ||| || ||||| || | | ||| | | |||| Sbjct 153 ATGAGTGAATTATCGACTGGTTATAGT-AGACATGACGGTA-TTT----A---C-GATTC 202 Query 417 TCCTGGAAGTAGGTCAATGGTGGACACTCCTC--TC-TCTGTTAGGAACT-CTTTCGAGC 472 || || |||| || || | || || |||| || |||| ||| |||| |||| |||| Sbjct 203 GCCAAGAGGTAGATCGGTGCTTGATACGCCTCTTTCTTCTGCTAGAAACTCCTTT-GAGC 261 Query 473 CTCATCCGATGGTTGCTGAGGCTTGGGAAGCTTTGAGAAGGTCAATGGTGTTCTTTCGTG 532 ||||||| ||| | |||||||||||||| ||||| |||||||||||||| |||||||||| Sbjct 262 CTCATCCTATGATGGCTGAGGCTTGGGAGGCTTTAAGAAGGTCAATGGTTTTCTTTCGTG 321 Query 533 GTCAACCCGTTGGTAC-CATTGCAGC-TTATGACCATGCCT-CCGAGGAGGTCTTGAACT 589 |||||||||||||||| | |||| || | ||| || || | || ||||||||||||| Sbjct 322 GTCAACCCGTTGGTACTC-TTGCCGCGGT-TGATAAT-ACTACTGATGAGGTCTTGAACT 378 Query 590 ATGATCAGGTGTTTGT-ACGTGACTTTGTACCAAGTGCATTGGCGTTTCTGATGAATGGA 648 |||||||||||||||| | | || |||||||| ||||| |||||||| ||||||||||| Sbjct 379 ATGATCAGGTGTTTGTGA-GGGATTTTGTACCGAGTGCGCTGGCGTTTTTGATGAATGGA 437 Query 649 GAGCCCGATATAGTGAAAAACTTCTTGCTCAAGACACTTCAGCTTCAAGGTTGGGAGAAA 708 || || |||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct 438 GAACCGGATATAGTGAAACACTTCTTGCTTAAGACACTTCAGCTTCAAGGTTGGGAGAAA 497 Query 709 CGGGTTGACCGGTTCAAGCTTGGG-GAAGGCGTTATGCCAGCGAGTTTCAAGGTGCTTCA 767 || || |||||||||||| || || ||||| || ||||| || ||||||||||||||||| Sbjct 498 CGTGTGGACCGGTTCAAG-TTAGGAGAAGGTGTGATGCCTGCAAGTTTCAAGGTGCTTCA 556 Query 768 TGATCC-AGTTCGTAAAACCGACACA-ATTATTGCGGATTTTGGAGAAAGCGCTATAGGA 825 |||||| | ||||| |||| || | | ||| |||||||||| || ||||| || || ||| Sbjct 557 TGATCCTA-TTCGTGAAACGGATA-ATATTGTTGCGGATTTCGGTGAAAGTGCCATTGGA 614 Query 826 AGAGTAGCACCGGTGGATTCAGGATTCTGGTGGATCATACTTCTCCGTGCTTACACGAAA 885 | || || || || |||||||| ||||||||||| || ||||| |||||||| || ||| Sbjct 615 CGTGTGGCTCCTGTAGATTCAGGGTTCTGGTGGATTATCCTTCTTCGTGCTTATACCAAA 674 Query 886 TCTACGGGAGATTTGACTTTATCTGAGACACCAGAGTGTCAGAGGGGAATGAGGCTTATA 945 ||||| |||||||||||| | || ||||| ||||||||||| | |||||||| || || Sbjct 675 TCTACTGGAGATTTGACTCTCTCGGAGACGCCAGAGTGTCAAAAGGGAATGAAACTGATC 734 Query 946 CTCTCTCTT-TGCTTATCCGAAGGTTTTGATAC-TTTCCCTACGCTTCTTTGTGCTGACG 1003 || ||| || |||||| | ||||| ||||| || ||||| |||||| ||||||||||| | Sbjct 735 CTTTCT-TTGTGCTTAGCTGAAGGGTTTGACACGTTTCC-TACGCTGCTTTGTGCTGATG 792 Query 1004 GTTGTTCTATGGTTGATAGGAGAATGGGTGTTTATGGATATCCAATAGAGATTCAAGC-T 1062 | ||||| ||| ||||| | ||||||||||||||||| |||||||| ||||| ||||| | Sbjct 793 GATGTTCCATGATTGATCGAAGAATGGGTGTTTATGGGTATCCAATTGAGATCCAAGCGT 852 Query 1063 CTGTTTTTCATGGCAT-TGAGATGC-GCCTTGTCGATGCTTAAA-CCAGACG-AGGAAGG 1118 |||| |||||||| | |||||| | |||||||||||| ||||| || || | || | || Sbjct 853 -TGTTCTTCATGGC-TCTGAGAT-CTGCCTTGTCGATG-TTAAAGCCCGATGGAG-ATGG 907 Query 1119 TC-GAGATTTCATAGA-AAGGATTGTGAAGAGACTTCACGCGCT-GAGTTTCCATATGCG 1175 | |||| | ||| || ||| || || ||| | |||||||| || ||| ||||||||||| Sbjct 908 -CAGAGAGTGCATTGAGAAG-ATCGTTAAGCGGCTTCACGC-CTTGAGCTTCCATATGCG 964 Query 1176 CAGTTACTTTTGGCTTGACTTTCAACAAC-TCAACGATATCTATAGGTACAAGACAGAGG 1234 || |||||| ||||| || | | | ||| |||| || || || |||| |||||| |||| Sbjct 965 CAATTACTTCTGGCTCGA-TCACCAGAACCTCAATGACATTTACAGGTTCAAGACCGAGG 1023 Query 1235 AGTACTCACACACCGCGGTGAACAAGTTCAACGTGATGCCGGACTCGATACCAGACTGGG 1294 | || || ||||| || |||||||||||||| |||||||| || || ||||| || |||| Sbjct 1024 AATATTCGCACACGGCAGTGAACAAGTTCAATGTGATGCCTGATTCTATACCGGAGTGGG 1083 Query 1295 TTTTCGACTTTATGCCTCTCCGTGGAGGATATTTTGTCGGCAATGTAAGCCCGGCCCGTA 1354 |||||||||| ||||||||||||||||| || ||||| || || ||| | || |||| || Sbjct 1084 TTTTCGACTTCATGCCTCTCCGTGGAGGCTACTTTGTGGGAAACGTAGGACCTGCCCATA 1143 Query 1355 TGGATTTCAGGTGGTTTTC-CTTAGGAAATTGTGTCTCCATCCTTTCTTCCTTGGCAACT 1413 |||||||| |||||||| | ||| || |||||||||||||| || ||||| ||||| ||| Sbjct 1144 TGGATTTCCGGTGGTTTGCGCTT-GGCAATTGTGTCTCCATACTCTCTTCATTGGCCACT 1202 Query 1414 CCGGATCAGTCAATGGCTATTATGGACCTCCTCGAGCACCGTTGGGAGGAGCTAGTAGGC 1473 || ||||| || ||||| |||||||||||||| |||||||| |||| |||||| ||||| Sbjct 1203 CCAGATCAATCCATGGCCATTATGGACCTCCTTGAGCACCGGTGGGCGGAGCTTGTAGGT 1262 Query 1474 GAGATGCCGCTCAAGATATGTTACCCTTGCATCGAAAGCCACGAGTGGCGGATTGTTACC 1533 |||||||| |||||||| ||||| || ||| |||| ||||||||||||| || || || Sbjct 1263 GAGATGCCCCTCAAGATTTGTTATCCATGCCTCGAGGGCCACGAGTGGCGCATCGTCACT 1322 Query 1534 GGTTGTGATCCTAAAAACACGA-GGTGGAGTTACCACAACGGTGGATCTTGGCCAGTATT 1592 || ||||| || || ||||| | ||||||| |||||||||||||||||||||||||| || Sbjct 1323 GGCTGTGACCCCAAGAACAC-ACGGTGGAGCTACCACAACGGTGGATCTTGGCCAGTTTT 1381 Query 1593 GCTGTGG-ACGCTGACGGCGGCATGCATCAAGACTGG-ACGGCCTCAAATAGCGAGACGT 1650 ||| ||| | ||| || || || ||| | ||||| || | | || || || || ||||| Sbjct 1382 GCTATGGCA-GCTAACAGCAGCGTGCGTTAAGACAGGGA-GACCGCAGATCGCAAGACGC 1439 Query 1651 GC-GATTGATCTAATTGAATCACGGCTACACCGAGATTGCTGGCCGGAATACTATGATGG 1709 || | |||| || || ||||| || || ||| | || || ||||| || || || ||||| Sbjct 1440 GCAG-TTGACCTCATAGAATCGCGTCTTCACAGGGACTGTTGGCCAGAGTATTACGATGG 1498 Query 1710 TAAGCAAGGAAGGTACGTTGGAAAACAAGCAAGGAAGTACCAGACTTGGTCAATCGCGGG 1769 ||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||| || Sbjct 1499 TAAGCTAGGAAGGTACGTTGGAAAACAGGCAAGGAAATACCAGACTTGGTCAATCGCAGG 1558 Query 1770 TTACTTGGTTGCGAAAATGATGCTTGAAGATCCTTCACATATTGGAATGATCTCTCTTGA 1829 |||||| || || |||||| |||| |||||||||||||| ||||| |||||||||||||| Sbjct 1559 TTACTTAGTGGCAAAAATGTTGCTAGAAGATCCTTCACACATTGGTATGATCTCTCTTGA 1618 Query 1830 AGAAGACAAACAGATGAAACCTGTTATCAAGAGATCTGCTTCATGG 1875 ||||||||||| |||||||| || |||||| ||||||| || ||| Sbjct 1619 AGAAGACAAACTCATGAAACCAGTCATCAAGCGATCTGCATCTTGG 1664 > Ahg316170 jgi|Araly1|316170|fgenesh1_pm.C_scaffold_2001203 Length=1500 Score = 721 bits (390), Expect = 0.0 Identities = 1049/1367 (77%), Gaps = 46/1367 (3%) Strand=Plus/Plus Query 536 AACCCGTTGGTACCATTGCAGCTTATGACCATGCCTCCGAGGAGGTCTTGAACTATGATC 595 |||| || || || || || || || |||||||| ||||||||||||||||||||||||| Sbjct 155 AACCGGTAGGAACAATCGCCGCCTACGACCATGCTTCCGAGGAGGTCTTGAACTATGATC 214 Query 596 AGGTGTTTGTACGTGACTTTGTACCAAGTGCAT-TGGCGTTTCTGATGAATGGAGAGCCC 654 |||| || |||||||| |||||||| || || | | |||||||||||||| |||||||| Sbjct 215 AGGTATTCGTACGTGATTTTGTACCGAGCGC-TCTAGCGTTTCTGATGAAAGGAGAGCCT 273 Query 655 GATATAGTGAAAAACTT-CTTGCTCAAGACACTTCAGCTTCAAGGTTGGGAGAAACGGGT 713 || || ||||| ||||| || || ||||||||||| |||| || || ||| | | Sbjct 274 GACATTGTGAAGAACTTTCTC-CTAAAGACACTTCATATTCAGGGACAAGACAAAATGAT 332 Query 714 TGACCGGTTCAAGCTTGGGGAAGGCGTTATGCCAGCGAGTTTCAAGGTGCTTCATGATCC 773 ||| |||||||||||| || |||| ||||||||||| ||||| || || ||| | || Sbjct 333 CGACAAGTTCAAGCTTGGTGATGGCGCAATGCCAGCGAGCTTCAAAGTTCTCCATAACCC 392 Query 774 -AGTTCGTA-AA-ACCGACACAATTATTGCGGATTTTGGAGAAAGCGCTATAGGAAGAGT 830 | | | | || || || || || || || || |||||||| ||||||||||| || || Sbjct 393 TA-T-CA-AGAAGACGGATACGATCATCGCTGACTTTGGAGAGAGCGCTATAGGGAGGGT 449 Query 831 AGCACCGGTGGATTCAGGATTCTGGTGGATCATACTTCTCCGTGCTTACACGAAATCTAC 890 || || || || || || || ||||||||||| || ||||| |||||||| || ||||| Sbjct 450 GGCTCCCGTCGACTCGGGGTTTTGGTGGATCATTCTCCTCCGAGCTTACACTAAGTCTAC 509 Query 891 GGGAGAT--TTGACTTTATCTGAGACACCAGAGTGTCAGAGGGGAATGAGGCTTATACTC 948 ||||| || || ||||||||| ||| ||||| || | |||||||||||| || ||| Sbjct 510 AGGAGACCATT--CTCTATCTGAGAGACCTGAGTGCCAAAAGGGAATGAGGCTCATTCTC 567 Query 949 TCTCTT-TG-CTTATCCGAAGGTTTTGATACTTTCCCTACGCTT-CTTTGTGCTGACGGT 1005 ||| || || || || || || ||||||||||| || || || || || || |||||| Sbjct 568 TCT-TTATGTCTC-TCTGAGGGGTTTGATACTTTTCCGACA-TTGCTCTGCGCAGACGGT 624 Query 1006 TGTTCTATGGTTGATAGGAGAATGGGTGTTTATGGATATCCAATAGAGATTCAAGCTCTG 1065 || || ||||| ||| | || ||||| |||| || ||||| || ||||||||||| || Sbjct 625 TGCTCCATGGTCGATCGTAGGATGGGCATTTACGGCTATCCGATCGAGATTCAAGCCCTC 684 Query 1066 TTTTTCATGGCA-TTGAGATGCGC-CTTGTCGATGCTTAAACCA-GACGAGGAAGGTCGA 1122 ||||||||||| || ||| ||| || |||||||| |||| | || || ||| | Sbjct 685 TTTTTCATGGCTCTTC-GATTCGCACTC-TCGATGCTGAAAC-ATGATTCTGAGGGTAAA 741 Query 1123 GA-TTTCATAGAAAGGATTGTGAAGAGACTTCACGCGCTGAGTTTCCATATGCGCAGTTA 1181 || ||| || |||| ||| |||| | | |||||||||||||| ||||| ||| | || || Sbjct 742 GAGTTT-ATGGAAAAGATAGTGACGCGGCTTCACGCGCTGAGCTTCCACATGAGAAGCTA 800 Query 1182 CTTTTGGCTTGACTTTCAA-CAACTCAACGATATCTATAGGTACAAGACAGAGGAGTACT 1240 ||||||||| || |||| | || ||||| || || || | || ||||| ||||| |||| Sbjct 801 CTTTTGGCTCGA-TTTCCAGCAGCTCAATGACATTTACCGTTATAAGACGGAGGAATACT 859 Query 1241 CACACACCGCGGTGAACAAGTTCAACGTGATGCCGGACTCGATACCAGACTGGGTTTTCG 1300 ||||||||||||| |||||||||||||| || || ||||| || || || ||| | |||| Sbjct 860 CACACACCGCGGTAAACAAGTTCAACGTCATCCCTGACTCCATTCCGGATTGGATCTTCG 919 Query 1301 ACTTTATGCCTCTCCGTGGAGGATATTTTGTCGGCAATGTAAG-CCCGGCCCGTATGGAT 1359 |||| ||||||||| | || || || || | || || || || |||| |||| ||||| Sbjct 920 ACTTCATGCCTCTCAGAGGTGGCTACTTCATTGGAAACGTCAGTCCCG-CCCGCATGGAC 978 Query 1360 TTCAGGTGGTTTTCCTTAGGAAATTGTGTCTCCATCCTTTCTTCCTTGGCAACTCCGGAT 1419 |||||||||||| | || ||||||||| || | || |||| || ||||| || || || Sbjct 979 TTCAGGTGGTTTGCGTTGGGAAATTGTATCGCAATTATTTCCTCATTGGCCACGCCAGAG 1038 Query 1420 CAGTCAATGGCTATTATGGACCTCCTCGAG-CACCGTTGGGAGGAGCTAGTAGGCGAGAT 1478 ||||| ||||| || |||||||| | ||| | ||| |||||||| || || || ||||| Sbjct 1039 CAGTCCATGGCCATCATGGACCTGATTGAGGC-CCGGTGGGAGGAACTGGTTGGAGAGAT 1097 Query 1479 GCCGCTCAAGATATGTTACCCTTGC-ATCGAAAGCCACGAGTGGCGGATTGTTACCGGTT 1537 |||| | ||||||||||| || || || || || ||||||||||| || || || || | Sbjct 1098 GCCGTTGAAGATATGTTATCCG-GCGATGGAGAGTCACGAGTGGCGTATCGTCACTGGCT 1156 Query 1538 GTGATCCTAAAAACACGA-GGTGGAGTTACCACAACGGTGGATCTTGGCCAGTA-TTGCT 1595 |||| ||||| ||||| | ||||||| ||||||||||| || ||||||||||| || || Sbjct 1157 GTGACCCTAAGAACAC-ACGGTGGAGCTACCACAACGGAGGCTCTTGGCCAGTGCTT-CT 1214 Query 1596 GTGGACGCTGACGGCGGCATGCATCAAGACTGGACGGCCTCAAATAGCGA-GACGTGCGA 1654 ||| ||| ||||||||| |||| ||||| ||||| || |||||||| | |||| || | Sbjct 1215 ATGGTTGCTAACGGCGGCAAGCATAAAGACCGGACGACCACAAATAGC-ACGACGGGCAA 1273 Query 1655 TTGA-TCTAATTGAATCACGGCTACACCGAGATTGCTGGCCGGAATACTATGATGGTAAG 1713 | || | | || |||| ||| |||| | |||||||| ||||| || || ||| Sbjct 1274 TAGAGT-TGGCGGAGGCACGACTATTGAAAGATGGATGGCCGGAGTACTACGACGGAAAG 1332 Query 1714 -CAAGGAAGGTACGTTGGAAAACAAGCAAGGAAGTACCAGACTTGGTCAATCGCGGGTTA 1772 | ||||||| | | |||||||| || || || | ||||| ||||||||||| || || Sbjct 1333 TCT-GGAAGGTTCATCGGAAAACAGGCCAGAAAATTTCAGACATGGTCAATCGCTGGCTA 1391 Query 1773 CTTGGTTGCGAAAATGATGCTTGAAGATCCTTCACATATTGGAATGATCTCTCTTGAAGA 1832 ||||| || || |||||| | || ||||| | ||| | ||||||||||| | ||||| Sbjct 1392 TTTGGTGGCCAAGATGATGATGGATGATCCAACGCATGTAGGAATGATCTCAATGGAAGA 1451 Query 1833 AGACAAACAGATGAAACCTGTTATCAAGAGATCTGCTTCATGGACTT 1879 ||| ||||| ||||||||| | | ||||||||| |||| ||||||| Sbjct 1452 AGAGAAACATATGAAACCTCCTCTTAAGAGATCTTCTTCTTGGACTT 1498 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 76409031470 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5