BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT4G11420.1 Length=3451 Score E Sequences producing significant alignments: (Bits) Value Ahg489971 jgi|Araly1|489971|fgenesh2_kg.6__3105__AT4G11420.1 4870 0.0 Ahg889834 jgi|Araly1|889834|Al_scaffold_0007_1820 436 4e-121 > Ahg489971 jgi|Araly1|489971|fgenesh2_kg.6__3105__AT4G11420.1 Length=3335 Score = 4870 bits (2637), Expect = 0.0 Identities = 3175/3417 (93%), Gaps = 108/3417 (3%) Strand=Plus/Plus Query 3 AGAAACCCTAGAGTTGCTTCCGCTTCGCTTCTCGTCTCTCTTATCAGTCTTCTCTTTTCA 62 ||||||||||||||||||||||||||| | | |||| | ||||||||| ||| Sbjct 1 AGAAACCCTAGAGTTGCTTCCGCTTCG-----C-T-TCTC---T---TCTTCTCTTATCA 47 Query 63 CGGCTACAAGGCTAATTGAGAGTGTCCCTTGCGTTAGAGTTTGTTACTAGCTTTTTTCGT 122 |||||||||||||||||||||||||||||||| | | || |||||||| Sbjct 48 CGGCTACAAGGCTAATTGAGAGTGTCCCTTGC----------G-T--TA---TTTTTCGT 91 Query 123 CTGAAACATGGCGAATTTTGCCAAACCAGAGAACGCGTTGAAGCGTGCTGATGAATTGAT 182 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 92 CTGAAACATGGCGAATTTTGCTAAACCAGAGAACGCGTTGAAGCGTGCTGATGAATTGAT 151 Query 183 CAATGTTGGACAGAAACAAGATGCTCTTCAGGCGCTTCATGATCTCATTACTTCCAAGAG 242 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 152 TAATGTTGGACAGAAACAAGATGCTCTTCAGGCGCTTCATGATCTCATTACTTCCAAGAG 211 Query 243 ATACAGAGCTTGGCAGAAACCGCTTGAGAAGATCATGTTTAAGTATCTTGATCTTTGTGT 302 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 212 ATACAGAGCTTGGCAGAAACCTCTTGAAAAGATCATGTTTAAGTATCTTGATCTTTGTGT 271 Query 303 TGACTTGAAGAGGGGTCGATTCGCTAAGGATGGATTGATTCAGTATCGTATTGTTTGCCA 362 |||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||| Sbjct 272 TGACTTGAAGAGGGGTCGGTTTGCTAAGGATGGGTTGATTCAGTATCGTATTGTTTGCCA 331 Query 363 GCAAGTGAATGTCAGTTC-CTTGGAGGAAGTTATCAAGCACTTCCTACATCTTGCTACTG 421 |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct 332 GCAAGTGAATGTCAGTTCTCTT-GAGGAAGTTATCAAGCACTTCCTACATCTTGCTACTG 390 Query 422 ACAAAGCTGAGCAAGCTCGGTCTCAGGCGGATGCCCTTGAGGAGGCTCTTGATGTTGATG 481 | ||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct 391 AGAAAGCTGAGCAGGCTCGTTCTCAGGCTGATGCCCTTGAGGAGGCTCTTGATGTTGATG 450 Query 482 ACCTTGAAGCTGATAGGAAGCCTGAGGATTTACAGCTAAGTATTGTCAGTGGGGAGAAGG 541 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 451 ACCTTGAAGCTGATAGGAAGCCTGAGGATTTACAGCTGAGTATTGTCAGTGGGGAGAAGG 510 Query 542 GAAAAGATAGGTCTGACCGTGAGTTGGTCACCCCATGGTTTAAGTTTC-TGTGGGAGACA 600 |||||||||||||||||||||| ||||||||||||||||| ||| ||| |||||||||| Sbjct 511 GAAAAGATAGGTCTGACCGTGAATTGGTCACCCCATGGTTCAAG-TTCTTGTGGGAGACG 569 Query 601 TACAGGACAGTCCTTGAGATATTGCGAAACAACTCAAAGTTGGAAGCACTTTATGCGATG 660 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 570 TACAGGACAGTGCTTGAGATATTGCGAAACAACTCAAAGTTGGAGGCACTTTATGCGATG 629 Query 661 ACAGCACATAAAGCCTTCCAGTTCTGTAAGCAGTACAAGCGAACAACAGAGTTCCGTAGG 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 630 ACAGCACATAAAGCCTTCCAGTTCTGTAAGCAGTACAAGCGAACAACAGAGTTCCGTAGG 689 Query 721 CTTTGTGAAATTATAAGAAATCATTTGGCAAACCTGAACAAGTACAGAGACCAAAGGGAC 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 690 CTTTGTGAAATTATAAGAAATCATTTGGCAAACCTGAACAAGTACAGAGACCAAAGGGAC 749 Query 781 CGACCTGACTTATCAGCCCCTGAGAGCTTGCAGCTGTATCTGGACACAAGGTTTGATCAG 840 |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct 750 CGACCTGACTTATCAGCCCCTGAGAGCTTGCAACTGTATCTGGACACAAGATTTGATCAG 809 Query 841 TTGAAAGTTGCTACTGAGCTTGGACTTTGGCAGGAAGCTTTTCGCTCTGTTGAAGATATC 900 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct 810 TTGAAAGTTGCTACCGAGCTTGGGCTTTGGCAGGAAGCTTTTCGCTCTGTTGAAGATATC 869 Query 901 TATGGATTAATGTGCATGGTCaaaaaaaCGCCCAAGTCATCTTTATTGATGGTTTATTAT 960 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 870 TATGGACTAATGTGCATGGTCAAAAAAACGCCCAAGTCATCTTTATTGATGGTTTATTAT 929 Query 961 TCCAAATTGACTGAGATCTTCTGGATTTCTTCTAGCCATCTTTATCATGCTTATGCATGG 1020 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 930 TCCAAATTGACCGAGATCTTCTGGATTTCTTCTAGCCATCTTTATCATGCTTATGCATGG 989 Query 1021 TTTAAGCTGTTTAGTCTGCAGAAAAATTTCAACAAGAATTTAAGCCAAAAGGATTTGCAG 1080 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 990 TTTAAGCTATTTAGTCTGCAGAAAAATTTCAATAAGAATTTAAGCCAAAAGGATTTGCAG 1049 Query 1081 CTAATAGCGTCATCTGTTGTCTTGGCGGCATTGTCCATTCCACCATTTGATCGGGCTCAG 1140 || || | ||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct 1050 CTGATTTCATCATCTGTTGTCTTGGCGGCATTGTCCGTTCCACCGTTTGATCGGGCTCAG 1109 Query 1141 AGCGCATCCCATATGGAACTTGAAAATGAGAAAGAACGCAATTTGAGGATGGCTAACCTC 1200 || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1110 AGTGCATCCCATATGGAACTTGAAAATGAGAAAGAACGCAATTTGAGGATGGCCAACCTC 1169 Query 1201 ATTGGATTCAATCTTGAACCTAAATTTGAGGGCAAAGATATGCTTTCCCGGTCAGCTCTT 1260 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1170 ATTGGATTCAATCTTGAACCTAAATTTGAGGGCAGAGATATGCTTTCCCGGTCAGCTCTT 1229 Query 1261 CTGTCAGAGCTGGTTTCAAAAGGTGTTTTGAGCTGTGCATCTCAGGAGGTCAAAGATCTT 1320 ||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||| Sbjct 1230 CTGTCAGAGCTGGTTTCAAGAGGTGTTCTGAGCTGTGCATCCCAGGAGGTCAAAGATCTT 1289 Query 1321 TTCCATGTTTTGGAGCATGAATTTCACCCACTTGATCTTGGCTCCAAGATTCAGCCTTTG 1380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1290 TTCCATGTTTTGGAGCATGAATTTCACCCACTTGATCTTGGCTCCAAGATTCAGCCTTTG 1349 Query 1381 CTGGAAAAGATTTCCAAATCTGGTGGGAAACTGTCCTCAGCTCCTTCTTTACCAGAAGTG 1440 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1350 CTGGAAAAGATTTCAAAATCTGGTGGGAAACTGTCCTCAGCTCCTTCTTTACCAGAAGCG 1409 Query 1441 CAACTTTCCCAATATGTTCCTTCTCTGGAGAAGCTTGCTACTCTGAGGCTACTTCAACAG 1500 || |||||||||||||||||| ||||||||||||||||||||||||||||||| || ||| Sbjct 1410 CAGCTTTCCCAATATGTTCCTGCTCTGGAGAAGCTTGCTACTCTGAGGCTACTACAGCAG 1469 Query 1501 GTGTCTAAGATTTATCAGACAATAAGAATTGAGAGTTTATCTCAGTTGGTACCCTTCTTT 1560 || |||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct 1470 GTTTCTAAGATTTATCAAACCATAAGAATTGAGAGTTTATCTCAGTTGGTACCCTTCTT- 1528 Query 1561 C-AATTCTCAGAGGTAGAGAAGATTTCTGTTGATGCTGTGAAGAACAATTTTGTTGCCAT 1619 | ||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct 1529 CGAATTCTCAGTGGTAGAGAAGATATCTGTTGATGCTGTGAAGAACAATTTCGTTGCCAT 1588 Query 1620 GAAAGTTGATCACATGAAGGGTGTTGTAATTTTTGGAAATTTGGGTATTGAGTCTGATGG 1679 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1589 GAAAGTTGATCACATGAAGGGTGTTGTAATTTTTGGAAATTTGGGTATTGAGTCTGATGG 1648 Query 1680 ACTGAGGGATCATCTGGCTGTTTTTGCCGAGTCTTTGAGCAAAGTAAGAGCTATGCTGTA 1739 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1649 ACTGAGGGATCATCTGGCTGTTTTTGCCGAGTCTTTGAGCAAAGTAAGAGCTATGCTGTA 1708 Query 1740 TCCTGTCCCAAGTAAAGCATCAAAACTAGCTGGCGTTATACCAAATTTAGCAGATACTGT 1799 |||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||| Sbjct 1709 TCCTGTCCCAAGTAAAGCATCAAAACTAGCTGGCATAATACCAAATTTAGCGGATACTGT 1768 Query 1800 TGAGAAAGAGCACAAAAGACTGCTTGCTCGTAAATCAATCATTGAAAAGAGGAAGGAGGA 1859 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1769 TGAGAAAGAACACAAAAGACTGCTTGCTCGTAAATCAATCATTGAAAAGAGGAAGGAGGA 1828 Query 1860 TCAAGAGCGTCAGCAACTAGAAATGGAACGTGAAGAGGAGCAGAAACGGCTTAAGCTTCA 1919 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1829 TCAAGAGCGTCAGCAACTAGAAATGGAACGTGAAGAGGAGCAGAAACGGCTTAAGCTTCA 1888 Query 1920 GAAGCTAACTGAAGAGGCAGAACAAAagagacttgcagcagagcttgcagagagaagaaa 1979 |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| || Sbjct 1889 GAAGCTAACTGAGGAGGCAGAACAGAAGAGACTTGCAGCAGAGCTTGCAGAGAGAAGGAA 1948 Query 1980 acaaagaatccttagagagatagaggagaaggagcttgaagaagCCCAAGCTTTACTGGA 2039 ||||||||||||||| ||||||||||||||||||||||||||||| || ||||| ||||| Sbjct 1949 ACAAAGAATCCTTAGGGAGATAGAGGAGAAGGAGCTTGAAGAAGCTCAGGCTTTGCTGGA 2008 Query 2040 AGAGACAGAGAAGCGCATGAAAAAGGGAAAGAAGAAGCCACTTTTAGACGGAGAGAAGGT 2099 || ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct 2009 GGACACAGAGAAGCGCATGAAAAAGGGAAAGAAGAAGCCGCTTTTAGATGGAGAGAAGGT 2068 Query 2100 GACAAAGCAATCTGTGAAGGAAAGGGCCTTAACTGAGCA-GCTCAAGGAAAGGCAAGAAA 2158 |||||||||| |||||| ||| ||||||||||||||||| | |||||||||||||||||| Sbjct 2069 GACAAAGCAAACTGTGATGGAGAGGGCCTTAACTGAGCAAG-TCAAGGAAAGGCAAGAAA 2127 Query 2159 TGGAGAAGAAGCTTCAAAAGCTTGCCAAAACGATGGATTATTTGGAAAGAGCAAAGAGAG 2218 |||||||||| || ||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct 2128 TGGAGAAGAAACTCCAAAAACTTGCCAAAACTATGGATTATTTGGAAAGAGCAAAGAGAG 2187 Query 2219 AAGAGGCTGCTCCATTGATTGAAGCTGCATATCAGCGAAGACTGGTAGAGGAAAGAGAGT 2278 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2188 AAGAGGCTGCTCCATTGATTGAAGCTGCATATCAGCGAAGACTGGTAGAGGAAAGAGAGT 2247 Query 2279 TTTATGAGCGTGAACAACAGCGTGAAGTTGAACTCAGTAAAGAGCGTCATGAGAGTGACT 2338 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2248 TTTATGAGCGCGAGCAACAGCGTGAAGTTGAACTCAGTAAAGAGCGTCATGAGAGTGACT 2307 Query 2339 TGAAGGAGAAGAACAGGTTGTCCAGAATGTTGGGTAATAAGGAAATATTCCAAGCACAAG 2398 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2308 TGAAGGAGAAAAACAGGTTGTCCAGAATGTTGGGTAATAAGGAAATATTCCAAGCACAAG 2367 Query 2399 TGATTAGTCGTCGACAAGCAGAGTTTGACAGAATCAGGACGGAGAGAGAGGAGCGTATCA 2458 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 2368 TGATTAGTCGACGACAAGCAGAGTTTGACAGAATAAGGACGGAGAGAGAGGAGCGTATCA 2427 Query 2459 GTAAAATAATCCGAGAGAAGAAGCAAGAAAGGGATATCAAGAGGAAGCAGATATATTATT 2518 | ||||||| |||| | |||||||||||||||||| |||||||||||||||||||||| Sbjct 2428 GCCAAATAATTCGAGCCAGGAAGCAAGAAAGGGATATTAAGAGGAAGCAGATATATTATT 2487 Query 2519 TGAAAATTgaagaagaaaggattaggaagctgcaggaagaagaggaagctcgcaagcagg 2578 ||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||| || Sbjct 2488 TGACAATTGAAGAAGAAAGAATTAGGAAGCTACAGGAAGAAGAGGAAGCTCGCAAGCGGG 2547 Query 2579 aagaagcTGAGAGGCTCAAGAAGGTAGAAGCTGAACGCAAAGCAAACTTGGAT-AAAGCT 2637 |||||||||||||||||||||||| | ||||||||||||||||||| |||||| ||| | Sbjct 2548 AAGAAGCTGAGAGGCTCAAGAAGGAACAAGCTGAACGCAAAGCAAAGTTGGATGAAA--T 2605 Query 2638 TT-TGAGAAGCAAAGGCAGAGAGAGATAGAGCTGGAAGAGAAAAGTAGGCGGGAACGAGA 2696 | ||||||||||||||||||||||| |||| |||| |||||| | |||| ||||||||| Sbjct 2606 TGCTGAGAAGCAAAGGCAGAGAGAGAGAGAGGTGGAGGAGAAAGGAAGGCTGGAACGAGA 2665 Query 2697 AGA-GCTGTTGAGAGGAACTA--A-TGCACCACCTGCTCGCCTTGCAGAGCCTACTGTTA 2752 || || ||||| |||||||| | |||||| ||||||||||||||||||||||| |||| Sbjct 2666 AGCTGC-GTTGAAAGGAACTACTAATGCACCGCCTGCTCGCCTTGCAGAGCCTACAGTTA 2724 Query 2753 CTCCTGTTGGAACTACCGCACcagcagc-agcagcagcagcagcaggagcaccagcagca 2811 |||||| ||||||| |||| || || || | ||||||||||| |||| || ||| | Sbjct 2725 CTCCTGCTGGAACTGCCGCCCCTGCTGCTA-CAGCAGCAGCATCAGGTGCGG--GCAA-A 2780 Query 2812 CCTTATGTTCCGAAGTGGAAGCGCCAGACTACTGAGGTCTCAGG-CC-C-ATCAGCA-C- 2866 | ||||||| |||||||||| ||||||||||||||||||| || | | ||||| | Sbjct 2781 --T-ATGTTCCTAAGTGGAAGCTCCAGACTACTGAGGTCTCATCACCACCAACAGCAGCA 2837 Query 2867 C-AACATCATCAGAAACTGACCGAC-GGTCCAACCGTGGGCCGCCTCCCGGAGATGACCA 2924 | |||| |||||||||||||||| | ||||||||||||| |||||||| ||||||||||| Sbjct 2838 CCAACACCATCAGAAACTGACCG-CTGGTCCAACCGTGGACCGCCTCCAGGAGATGACCA 2896 Query 2925 CTGGGGAAGCAACAGAGGAGCCG-CTCAGAATACTGACCGGTGGACTAGTAATAGGGAAA 2983 |||||||| || ||||||| ||| |||||||||||||||||||||||||| Sbjct 2897 CTGGGGAAACAGCAGAGGA-CCGGCTCAGAATACTGACCGGTGGACTAGT---------- 2945 Query 2984 GATCTGGACCTCCAGCTGAAGGAGGAGACCGTTGGGGTTCTGGTCCTAGAGGCAGTGATG 3043 | | |||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 2946 ---C----C-TCCAGCTGAAGGAGGAGACCGTTGGGGTCCTGGTCCTAGAGGCAGTGATG 2997 Query 3044 ATCGCCGATCCACATTTGGAAGCTCCAGGCCCAGGCCAACACAGCGTTGAGTAATAATAA 3103 | |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 2998 AACGCCGATCTGCATTTGGAAGCTCCAGACCCAGGCCAACACAGCGTTGAGTAATAATAA 3057 Query 3104 tttttttGGTCTCAATCTCCATGGGAATGAATGAAAAAGGTTAT--CTCTGGATTTTCAA 3161 ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| Sbjct 3058 ATTTTTTGGTCTCAATCTCCATGGGAATGAATGAAA--GGTTATATCTCTGGATTTTCAA 3115 Query 3162 CATCACAGCACTCTTCTTTAGCCCAAACCTGTCTCTTCTTCTTTTGAAGATTGCTCATCT 3221 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3116 CATCACAGCACTCCTCTTTAGCCCAAACCTGTCTCTTCTTCTTTTGAAGATTGCTCATCT 3175 Query 3222 TTTATAAGTTTTTATGAAAGATTTTAAAACATGTTA-GACTCGTTTTTTGCTCTACACA- 3279 |||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 3176 TTTATATGTTTT-ATGAAAGATTTTAAAACATGTTAAGACTCGTTTTTTGCTCTACACAA 3234 Query 3280 C-CCA-GAGAGAGTTGTTATTTCCTTCTTCGGTTGGATCTTTCTTTGTTTGTCCAATTTA 3337 | ||| |||||||||| ||||||||||||||||||||||||| | |||||||| Sbjct 3235 CACCAAGAGAGAGTTGCTATTTCCTTCTTCGGTTGGATCTTT----GCTTGTCCAA---- 3286 Query 3338 TTTCCAACTTTCTGCTGTAAAAACCTTTGACATTGATCAGCTTCTCTTTCAA-GCAA 3393 | ||||||||||||||||||||||||| ||||||||||| |||| | |||| Sbjct 3287 ---C----TTTCTGCTGTAAAAACCTTTGACATCGATCAGCTTCT-TTTCCATGCAA 3335 > Ahg889834 jgi|Araly1|889834|Al_scaffold_0007_1820 Length=1068 Score = 436 bits (236), Expect = 4e-121 Identities = 404/482 (84%), Gaps = 23/482 (5%) Strand=Plus/Plus Query 1541 CTCAGTTGGTACCCTTCTTTC-AATTCTCAGAGGTAGAGAAGATTTCTGTTGATGCTGTG 1599 ||||||| || || ||| ||| | ||||||| ||| |||| ||| || | ||||||||| Sbjct 210 CTCAGTT-GTTCCTTTC-TTCGACTTCTCAGCGGTTGAGACGATATCAGCTGATGCTGT- 266 Query 1600 AAG-AACAATTTTGTTGCCATGAAAGTTGATCACATGAAGGGTGTTGTAATTTTTGGAAA 1658 ||| |||||||| |||| |||||||||||||||||| ||||||||||||||||||||||| Sbjct 267 AAGAAACAATTTCGTTGACATGAAAGTTGATCACATAAAGGGTGTTGTAATTTTTGGAAA 326 Query 1659 TTTGGGTATTGAGTCTGATGGACTGAGGGATCATCTGGCTGTTTTTGCCGAGTCT-TTGA 1717 | || ||| |||||||||||| |||| || | ||| ||| ||||||| ||| || | || Sbjct 327 TCTGAGTAATGAGTCTGATGGGCTGAAAGAACCTCTAGCTATTTTTGCTGAGACTATGGA 386 Query 1718 GCAAAGT-AAGAGCTATGCTGTATCCTGTCCCAAGTAAAGCATCAAAACTAGCTGGCGTT 1776 |||| | |||||| ||| | | ||||| |||||||||||||||||| | | || || | Sbjct 387 -CAAA-TCAAGAGCGATGTTATTTCCTGCCCCAAGTAAAGCATCAAAGGTTGGTGACG-T 443 Query 1777 A-TACCAAATTTAGCA-GATACTGTTGAGAAA-GAGCACAAAAGACTGCTTGCTCGTAAA 1833 | |||||||| ||| | || ||||| || ||| |||||||||||||||||| |||| ||| Sbjct 444 AGTACCAAATCTAG-AGGAGACTGTAGA-AAAGGAGCACAAAAGACTGCTTTCTCGGAAA 501 Query 1834 TCAATCATTGAAAAGAGGAAGGAGGATCAAGAGCGTCAGCAACTAGAAATGGAACGTGAA 1893 |||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||| Sbjct 502 TCAATCATTGAAAAGAGGAAGGAGGAACAAGAGCGTCAGCAACTAGAGATGGAACTTGAA 561 Query 1894 GAGGAGCAGA-AACGGCTTAAGCTTCAGAAGCTAACTGAA-GAGGCAGAACAAAagagac 1951 |||||||||| || | |||||||||| ||||||||| || ||||||||||| ||||||| Sbjct 562 GAGGAGCAGAGAAAG-CTTAAGCTTCTGAAGCTAACC-AATGAGGCAGAACAGAAGAGAC 619 Query 1952 ttgc-agcagagcttgcag-agagaagaaaacaaagaatccttagagagatagaggagaa 2009 |||| | |||||||| || |||| |||| ||| ||||| | ||| | |||||||||||| Sbjct 620 TTGCGA-CAGAGCTTA-AGGAGAGGAGAAGACACAGAATTCATAGGGGGATAGAGGAGAA 677 Query 2010 gg 2011 || Sbjct 678 GG 679 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 130309129952 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5