BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT4G11720.1 Length=2248 Score E Sequences producing significant alignments: (Bits) Value Ahg895371 jgi|Araly1|895371|Al_scaffold_0006_3367 3271 0.0 Ahg895358 jgi|Araly1|895358|Al_scaffold_0006_3354 2988 0.0 > Ahg895371 jgi|Araly1|895371|Al_scaffold_0006_3367 Length=2127 Score = 3271 bits (1771), Expect = 0.0 Identities = 2015/2132 (95%), Gaps = 19/2132 (1%) Strand=Plus/Plus Query 37 ATGGTGAACGCGATTTTAATGGCTTGTATACTCGCCGGAATTTTCGTCGGAATGTTCAAC 96 ||||||||| ||||||||||||||||| || ||||||||||| |||||||| | || ||| Sbjct 1 ATGGTGAACCCGATTTTAATGGCTTGTGTAATCGCCGGAATTGTCGTCGGAGTATTTAAC 60 Query 97 GAAGTCGACGGAATTCAGATTTTATCGAAATCAAAGCTCGAAAAGTGTGAGAAAACATCA 156 |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct 61 GAAGTCGACGGAATTCAGATTTTATCGAAATCAAAGCTGGAGAAGTGTGAGAAAACATCA 120 Query 157 GATTCTGGTAATCTCAATTGTTCCACTAAGATCGTCTTGAATCTCGCTGTTCCCAGTGGA 216 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 121 GATTCTGGTAATCTCAATTGTTCTACTAAGATCGTCTTGAATCTCGCTGTTCCCAGTGGA 180 Query 217 TCCAGTGGAGGAGAGGCTTCGATTGTAGCGGAGATCGTGGAGGTTGAAGATAACTCGAGT 276 ||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||| Sbjct 181 TCCAGTGGAGGAGAGGCTTCGATCGTAGCGGAGATCGTCGAGGTTGAAGATAATTCGAGT 240 Query 277 AGTAATATGCAAACCGTACGGATTCCACCGGTTATTACAGTGAACAAATCTGCAGCATAT 336 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 241 AGTAATATGCAAACCGTACGGATTCCACCGGTTATTACAGTGAACAAATCCGCAGCATAT 300 Query 337 GCTCTCTATGATCTTACTTACATTAGGGATGTACCTTATAAACCTCAAGAGTATCATGTC 396 ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 301 GCTCTTTATGATCTTACTTACATTAGGGATGTGCCTTATAAACCTCAAGAGTATCATGTT 360 Query 397 ACGACTCGAAAGTGTGAACACGATGCTGGACCGGATATTGTACAAATTTGTGAGAGGTTG 456 ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| Sbjct 361 ACGACTCGAAAGTGTGAACCCGATGCTGGACCGGATATTGTACAAATATGTGAGAGGTTG 420 Query 457 AGAGATGAG-AAGGGTAATGTTTTAGAGCAGACTCAGCCGATTTGTTGTCCATGTGGACC 515 ||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct 421 AGAGATGAGAAAGGG-AATGTTTTGGAGCAGACTCAGCCGATTTGTTGTCCATGTGGACC 479 Query 516 GCA-ACGAAGAATGCCTTCTTCTTGTGGAGATATTTTTGATAAGATGATTAAAGGGAAGG 574 ||| | ||||||||||||| ||||||||||||||||||||||||||||| ||||| |||| Sbjct 480 GCAGA-GAAGAATGCCTTCATCTTGTGGAGATATTTTTGATAAGATGATAAAAGGCAAGG 538 Query 575 CAAATACCGCGCATTGCCTTCGTTTTCCAGGTGACTGGTTCCATGTTTTCGGGATTGGAC 634 ||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 539 CAAATACTGCGCATTGCCTTCGTTTTCCAGGTGACTGGTTCCATGTTTTCAGCATTGGAC 598 Query 635 AACGGTCACTAGGATTTAGTGTGCGAGTTGAGTTGAAAACAGGAACTAGAGTTTCAGAAG 694 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 599 AACGGTCACTAGGATTTAGCGTGCGAGTTGAGTTGAAAACAGGAACTAGAGTTTCAGAAG 658 Query 695 TGATCATTGGTCCTGAAAATAGGACAGCTACTGCAAATGATAACTTTCTCAAAGTTAATC 754 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct 659 TGATCATTGGTCCTGAAAATAGGACAGCTACTGCAAATGATAATTTTCTCAAGGTTAATC 718 Query 755 TCATAGGAGACTTTGGTGGTTACACAAGTATTCCTTCTTTCGAGGACTTCTATCTTGTAA 814 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 719 TCATAGGAGACTTTGGTGGTTATACAAGTATTCCTTCTTTCGAGGACTTCTATCTTGTAA 778 Query 815 TCCCAAGAGAGGCGGCTGAAGCGGGACAACCAGGGAGCTTAGGCGCAAATTACTCAATGT 874 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 779 TCCCAAGAGAGGCGGCTGCAGCGGGACAACCAGGGAGCTTAGGCGCAAATTACTCAATGT 838 Query 875 GGATGCTGCTTGAGAGAGTGAGATTTACATTGGATGGCTTAGAATGTAATAAAATCGGTG 934 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 839 GGATGCTGCTTGAGAGAGTGAGATTTACATTGGATGGCTTAGAATGTAATAAAATCGGTG 898 Query 935 TTGGTTATGAAGCTTTCAACACCCAACCAAATTTCTGCTCTTCTCCATATTGGAGTTGCT 994 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 899 TTGGTTATGAAGCTTTCAACACCCAACCAAATTTCTGCTCTTCACCATATTGGAGTTGCT 958 Query 995 TGCATAATCAACTATGGAACTTCCGTGAGTCAGATATAAACAGAATC-GACCGACACCAA 1053 ||||||||||||||||||||||||| ||| ||||||| ||| ||||| | |||||||||| Sbjct 959 TGCATAATCAACTATGGAACTTCCGCGAGGCAGATATTAACCGAATCAG-CCGACACCAA 1017 Query 1054 CTTCCTTTATATGGACTTGAAGGAAGATTTGAGAGGATCAATCAACATCCAAACGCGGGG 1113 ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct 1018 CTTCCTTTATATGGACTGGAAGGAAGATTTGAGAGGATTAATCAACATCCAAACGCAGGG 1077 Query 1114 CCTCACTCGTTCTCAATTGGAGTCACGGAAACACTCAACACAAATCTAATGATAGAACTA 1173 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1078 CCTCACTCGTTCTCGATTGGAGTCACGGAAACACTCAACACAAATCTAATGATAGAACTA 1137 Query 1174 AGAGCTGATGATATTGAATACGTTTTCCAGAGGAGTCCC-GGTAAGATCATAAACATCGC 1232 ||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||| Sbjct 1138 AGAGCTGATGATATTGAATACGTTTTCCAGAGGAG-CCCTGGTAAAATCATAAACATCGC 1196 Query 1233 GATACCGACATTCGAAGCACTTACACAATTCGGAGTTGCTGCAGTCATAATCAAGAATAC 1292 ||||| ||||| || ||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1197 TATACCCACATTTGAGGCACTTACACAATTCGGAGTTGCTGCAGTCACAATCAAGAATAC 1256 Query 1293 TGGTGAAGTAGAAGCGTCTTATAGCTTAACGTTTGATTGCTCCAAAGGCGTGGCTTTTGT 1352 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1257 CGGTGAAGTAGAAGCATCTTATAGCTTAACGTTTGATTGCTCCAAAGGCGTGGCTTTTGT 1316 Query 1353 TGAGGAACAATTTTTCATTATAAAACCGAAAGCGGTTACTACTCG-GTCTTTTAAGCTGT 1411 |||||| ||||| |||||||||||||| ||||||||||||||||| | |||||||||| | Sbjct 1317 TGAGGAGCAATTCTTCATTATAAAACCAAAAGCGGTTACTACTCGAG-CTTTTAAGCTAT 1375 Query 1412 ACCCGACGAAAGATCAGGCTGCAAAGTATATATGCACAGCTATACTCAAGGACTCTCAGT 1471 |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1376 ACCCGACGAAAGATCAAGCTGCAAAGTATATATGCACAGCTATACTCAAGGATTCTCAGT 1435 Query 1472 TCAGCGAAGTAGACCGAGCCGAGTGTCAATTTAGTACAACGGCTACCGTACTTGACAATG 1531 |||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1436 TCAGTGAAGTAGACAGAGCCGAGTGTCAATTTAGTACAACGGCTACCGTACTCGACAATG 1495 Query 1532 GAACTCAGGTTACTAATCCATTTCAAATTCCAGAGACTCAACCTAAAGGTTTCTTTGATT 1591 |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct 1496 GAACTCAGGTTACTAATCCATTTCAAATTCCAGAAACTCATCCTAAAGGTTTCTTTGATT 1555 Query 1592 CGATCAGGATACTATGGACGAAAATCATCAATGGTTTAGTCGATTTCATCACCGGAGATA 1651 |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1556 CGATAAGGATACTAGGGACGAAAATCATCAATGGTTTAGTCGATTTCATCACCGGAGATA 1615 Query 1652 CTTGCAGAAACAAATGCTCGAGTTTCTTCGACTTCAGTTGCCACATTCAATACGTTTGCT 1711 |||||||||||||||||||||||||||| || ||||| |||||||||||||||||||| | Sbjct 1616 CTTGCAGAAACAAATGCTCGAGTTTCTTTGATTTCAGCTGCCACATTCAATACGTTTGTT 1675 Query 1712 TAAGCTGGATGGTTATGTTTGGTCTTCTCCTCGCTCTCTTCCCAATTACTTGTTTGCTTC 1771 ||||||||||||||||||| || |||||||||||||| ||||||| || |||||||||| Sbjct 1676 TAAGCTGGATGGTTATGTTCGGCCTTCTCCTCGCTCTTTTCCCAACCACATGTTTGCTTC 1735 Query 1772 TTTGGCTCTTGCACCAAAAGGGACTCTTTGATCCATGCTACGACTGGTGGGAAGATCATT 1831 |||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct 1736 TTTGGCTCTTACACCAAAAGGGACTATTTGATCCATGCTACAACTGGTGGGAAGATCATT 1795 Query 1832 TCGATTTAGACCATCATCGGAGATTATTACCCTCCAGAGCAGACGTTGTTAACCGCCATC 1891 |||| |||||||||||| |||||||||||||| |||||| | || | | ||||||||||| Sbjct 1796 TCGACTTAGACCATCATAGGAGATTATTACCCACCAGAGAAAACATCGCTAACCGCCATC 1855 Query 1892 ATCACCATCACAAGCATCGTCAT-----CA---CC-ATAATCACCATCGTAGGACACACC 1942 |||||||||||||||||| |||| || || ||||||| |||||||||||||||| Sbjct 1856 ATCACCATCACAAGCATCATCATGGTGTCAAAACCCATAATCATCATCGTAGGACACACC 1915 Query 1943 AGAGACACAAACATCATCATGGTCAAGACGACGACGTATTGCAGAAGATGATGCTTGAAC 2002 ||||||||||||| |||||||| || || | ||||| |||||||||||||||||||| | Sbjct 1916 AGAGACACAAACACCATCATGGGGAAAACCATGACGTTTTGCAGAAGATGATGCTTGACC 1975 Query 2003 GTGACCACAGCGACTCTCACTACTACCACCAACTTCATCGAGTCCATAAAGATAGCAAGC 2062 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1976 GTGACCACAGCGACGCTCACTACTACCACCAACTTCATCGAGTCCATAAAGATAGCAAGC 2035 Query 2063 AGAAGCAGCGTAGGCGAGCCAAGCACGGGATCGTCCTGCCACGTGATGTGCACGTGGAAA 2122 ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct 2036 AGAAGCAGCGTAGGCGAGCCAAGCACGGGATTGTCTTGCCACGTGATGTGCACGTGGAAA 2095 Query 2123 GACAGAGGAAACAAAGACTACGTGAGAGTTAA 2154 ||| ||||| |||||||||||||||| ||||| Sbjct 2096 GACGGAGGAGACAAAGACTACGTGAGTGTTAA 2127 > Ahg895358 jgi|Araly1|895358|Al_scaffold_0006_3354 Length=2133 Score = 2988 bits (1618), Expect = 0.0 Identities = 1973/2142 (92%), Gaps = 33/2142 (2%) Strand=Plus/Plus Query 37 ATGGTGAACGCGATTTTAATGGCTTGTATACTCGCCGGAATT-TTCGTCGGAATGTTCAA 95 |||||||||||||| ||||||||| || |||||||| || || |||||||||| || Sbjct 1 ATGGTGAACGCGATCGCGATGGCTTGTGTAATCGCCGGAGTTGTT-ATCGGAATGTTAAA 59 Query 96 CGAAGTCGACGGAATTCAGATTTTATCGAAATCAAAGCTCGAAAAGTGTGAGAAAACATC 155 ||||||||||||||| ||||||||||| ||||||||||| || ||||||||||||||||| Sbjct 60 CGAAGTCGACGGAATCCAGATTTTATCTAAATCAAAGCTGGAGAAGTGTGAGAAAACATC 119 Query 156 AGATTCTGGTAATCTCAATTGTTCCACTAAGATCGTCTTGAATCTCGCTGTTCCCAGTGG 215 ||||| || ||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct 120 CGATTCAGGGAATCTAAATTGTTCAACTAAGATCGTCTTGAATCTCGCTGTTCCCAGTGG 179 Query 216 ATCCAGTGGAGGAGAGGCTTCGATTGTAGCGGAGATCGTGGAGGTTGAAGATAACTCGAG 275 |||||||||||||||||||||||| |||||||| |||||||| ||||||||||| ||||| Sbjct 180 ATCCAGTGGAGGAGAGGCTTCGATCGTAGCGGAAATCGTGGAAGTTGAAGATAATTCGAG 239 Query 276 TAGTAATATGCAAACCGTACGGATTCCACCGGTTATTACAGTGAACAAATCTGCAGCATA 335 ||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||| Sbjct 240 TAGTAATATGCAAACTGTACGGATTCCACCGGTGATTACAGTGAATAAATCTGCAGCATA 299 Query 336 TGCTCTCTATGATCTTACTTACATTAGGGATGTACCTTATAAACCTCAAGAGTATCA-TG 394 ||||||||||||||||||||||||||||||||||||||| || |||||||||||| | | Sbjct 300 TGCTCTCTATGATCTTACTTACATTAGGGATGTACCTTACAAGCCTCAAGAGTAT-AGCG 358 Query 395 TCACGACTCGAAAGTGTGAACAC-GATGCTGGACCGGATATTGTACAAATTTGTGAGAGG 453 | ||||||||||||||||||| | ||||||||||| |||||||||||||| ||||||||| Sbjct 359 TTACGACTCGAAAGTGTGAAC-CTGATGCTGGACCTGATATTGTACAAATATGTGAGAGG 417 Query 454 TTGAGAGATGAGAAGGGTAATGTTTTAGAGCAGACTCAGCCGATTTGTTGTCCATGTGGA 513 ||| ||||||||||||| |||||||| ||||||||||| || || ||||||||||||||| Sbjct 418 TTGCGAGATGAGAAGGGCAATGTTTTGGAGCAGACTCAACCTATATGTTGTCCATGTGGA 477 Query 514 CCGCAACGAAGAATGCCTTCTTCTTGTGGAGATATTTTTGATAAGATGATTAAAGGGAAG 573 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct 478 CCGCAACGAAGAATGCCTTCATCTTGTGGAGATATTTTTGATAAGATGATAAAAGGGAAG 537 Query 574 GCAAATACCGCGCATTGCCTTCGTTTTCCAGGTGACTGGTTCCATGTTTTCGGGATTGGA 633 ||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct 538 GCAAATACCGCTCATTGCCTTCGTTTTCCAGGTGACTGGTTCCATGTTTTCAGCATTGGA 597 Query 634 CAACGGTCACTAGGATTTAGTGTGCGAGTTGAGTTGAAAACAGGAACTAGAGTTTCAGAA 693 |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 598 CAACGGTCACTAGGATTTAGTGTGCGGGTTGAGTTAAAAACAGGAACTAGAGTTTCAGAA 657 Query 694 GTGATCATTGGTCCTGAAAATAGGACAGCTACTGCAAATGATAACTTTC-TCAAAGTTAA 752 |||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||| Sbjct 658 GTGATCATTGGTCCTGAAAATAGGACAGCTACTGCAAATGATAA-TTTCCTCAAGGTTAA 716 Query 753 TCTCATAGGAGACTTTGGTGGTTACACAAGTATTCCTTCTTTCGAGGACTTCTATCTTGT 812 ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct 717 TCTCATAGGAGACTTTGCTGGTTACACAAATATTCCTTCTTTCGAGGACTTCTATCTTGT 776 Query 813 AATCCCAAGAGAGGCGGCTGAAGCGGGACAACCAGGGAGCTTAGGCGCAAATTACTCAAT 872 |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct 777 AATCCCAAGAGAGGCGGCTGTAGCGGGACAACCAGGGAATTTAGGCGCAAATTACTCAAT 836 Query 873 GTGGATGCTGCTTGAGAGAGTGAGATTTACATTGGATGGCTTAGAATGTAATAAAATCGG 932 ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 837 GTGGATGCTCCTTGAGAGATTGAGATTTACATTGGATGGCTTAGAATGTAATAAAATCGG 896 Query 933 TGTTGGTTATGAAGC-TTTCAACACCCAACCAAATTTCTGCTCTTCTCCATATTGGAGTT 991 |||||| |||||||| ||| || | |||||||||||||||||||| ||||||||||||| Sbjct 897 TGTTGGCTATGAAGCCTTT-AATAGTCAACCAAATTTCTGCTCTTCACCATATTGGAGTT 955 Query 992 GCTTGCATAATCAACTATGGAACTTCCGTGAGTCAGATATAAACAGAATCGACCGACACC 1051 |||||||||||||||||||||||||||||||| ||||||| ||| | ||| ||||| ||| Sbjct 956 GCTTGCATAATCAACTATGGAACTTCCGTGAGGCAGATATTAACCGGATCAACCGAAACC 1015 Query 1052 AACTTCCTTTATATGGACTTGAAGGAAGATTTGAGAGGATCAATCAACATCCAAACGCGG 1111 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1016 AACTTCCTTTATATGGACTGGAAGGAAGATTTGAGAGGATCAATCAACATCCAAACGCGG 1075 Query 1112 GGCCTCACTCGTTCTCAATTGGAGTCACGGAAACACTCAACACAAATCTAATGATAGAAC 1171 |||||||||||||||| ||||||||||| |||||||| ||||||||||| |||||||||| Sbjct 1076 GGCCTCACTCGTTCTCCATTGGAGTCACAGAAACACTTAACACAAATCTGATGATAGAAC 1135 Query 1172 TAAGAGCTGATGATATTGAATACGTTTTCCAGAGGAGTCCC-GGTAAGATCATAAACATC 1230 ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct 1136 TAAGAGCTGATGATATTGAATACGTTTTCCAGAGGAG-CCCTGGTAAGATCATAAACATA 1194 Query 1231 GCGATACCGACATTCGAAGCACTTACACAATTCGGAGTTGCTGCAGTCATAATCAAGAAT 1290 || |||||||||||||| ||||||||||||||||||||||||||||| | || ||||||| Sbjct 1195 GCTATACCGACATTCGAGGCACTTACACAATTCGGAGTTGCTGCAGTTACAACCAAGAAT 1254 Query 1291 ACTGGTGAAGTAGAAGCGTCTTATAGCTTAACGTTTGATTGCTCCAAAGGCGTGGCTTTT 1350 || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1255 ACAGGTGAAGTAGAAGCATCTTATAGCTTAACGTTTGATTGCTCCAAAGGCGTGGCTTTT 1314 Query 1351 GTTGAGGAACAATTTTTCATTATAAAACCGAAAGCGGTTACTACTCGGTCTTTTAAGCTG 1410 |||||||| ||||| |||||||||||||| ||||||||||| ||||| |||||||||||| Sbjct 1315 GTTGAGGAGCAATTCTTCATTATAAAACCAAAAGCGGTTACAACTCGATCTTTTAAGCTG 1374 Query 1411 TACCCGACGAAAGATCAGGCTGCAAAGTATATATGCACAGCTATACTCAAGGACTCTCAG 1470 |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| | Sbjct 1375 TACCCGACGAAAGATCAGGCTGCAAAATATATATGCACAGCTATACTCAAGGATTCTCTG 1434 Query 1471 TTCAGCGAAGTAGACCGAGCCGAGTGTCAATTTAGTACAACGGCTACCGTACTTGACAAT 1530 ||||||||||||||| |||||||||||||||| || ||||||||||| ||||| |||||| Sbjct 1435 TTCAGCGAAGTAGACAGAGCCGAGTGTCAATTCAGCACAACGGCTACTGTACTCGACAAT 1494 Query 1531 GGAACTCAGGTTACTAATCCATTTCAAATTCCAGAGACTCAACCTAAAGGTTTCTTTGAT 1590 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1495 GGAACTCAGGTTACTAATCCATTTCAAATTCCAGAGACTCGTCCTAAAGGTTTCTTTGAT 1554 Query 1591 TCGATCAGGATACTATGGACGAAAATCATCAATGGTTTAGTCGATTTCATCACCGGAGAT 1650 ||||| |||||| | ||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1555 TCGATTAGGATAATGTGGACGAAACTCATCAATGGTTTAGTCGATTTCATCACCGGAGAC 1614 Query 1651 ACTTGCAGAAACAAATGCTCGAGTTTCTTCGACTTCAGTTGCCACATTCAATACGTTTGC 1710 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1615 ACTTGCAGAAACAAATGCTCGAGTTTCTTCGACTTCAGCTGCCACATTCAATACGTTTGC 1674 Query 1711 TTAAGCTGGATGGTTATGTTTGGTCTTCTCCTCGCTCTCTTCCCAATTACTTGTTTGCTT 1770 || ||||||||||||||||| || ||||||||||||||| |||||| |||||| | ||| Sbjct 1675 TTGAGCTGGATGGTTATGTTCGGCCTTCTCCTCGCTCTCATCCCAACCACTTGTGTCCTT 1734 Query 1771 CTTTGGCTCTTGCACCAAAAGGGACTCTTTGATCCATGCTACGACTGGTGGGAAGATCAT 1830 || |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| Sbjct 1735 CTCTGGCTCTTGCACCAAAAGGGACTCTTTGATCCATTCTACGATTGGTGGGAAGATCAT 1794 Query 1831 TTCGATTTAGACCATCATCGGAGATTATTACC-CTC-C-AGAGCAGACGTTGTTAACCGC 1887 ||||| |||||||||||||||||||| ||||| | | | |||| ||||| | | |||||| Sbjct 1795 TTCGACTTAGACCATCATCGGAGATTGTTACCACCCACTAGAGAAGACGCTATAAACCGC 1854 Query 1888 CATCATCACCATCAC-A-----AGCATCGTCAT-----CA---C-CATAATCACCATCGT 1932 | ||||||||||||| | ||||||| ||| || | |||||||| |||||| Sbjct 1855 CGTCATCACCATCACCATCGCCAGCATCGGCATGGTGTCAAAACTCATAATCATCATCGT 1914 Query 1933 AGGACACACCAGAGACACAAACATCATCATGGTCAAGACGACGACGTATTGCAGAAGATG 1992 || |||||| ||||||||||||| || ||| |||||||||||||| |||||||| | Sbjct 1915 AGAACACACAAGAGACACAAACACCACCATAACCAAGACGACGACGTTTTGCAGAA--T- 1971 Query 1993 ATGCTTGAACGTGACCACAGCGACTCTCACTACTACCACCAACTTCATCGAGTCCATAAA 2052 ||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||| Sbjct 1972 ATGCTTGAACGTGACCACAACGAGTCTCACTACTACCACCAACTTCACCGAGTCCATAAA 2031 Query 2053 GATAGCAAGCAGAAGCAGCGTAGGCGAGCCAAGCACGGGATCGTCCTGCCACGTGATGTG 2112 |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 2032 GATAGCAAACAGAAGCAGCGTAGACGAGCCAAGCACGGGATCGTCCTGCCACGTGATGTG 2091 Query 2113 CACGTGGAAAGACAGAGGAAACAAAGACTACGTGAGAGTTAA 2154 |||||||| |||| || || |||||| ||||||||||||||| Sbjct 2092 CACGTGGATAGACGGAAGAGACAAAGGCTACGTGAGAGTTAA 2133 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 84636524390 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5