BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT4G14150.1 Length=3952 Score E Sequences producing significant alignments: (Bits) Value Ahg946991 jgi|Araly1|946991|scaffold_703220.1 6196 0.0 Ahg930410 jgi|Araly1|930410|scaffold_302867.1 1471 0.0 > Ahg946991 jgi|Araly1|946991|scaffold_703220.1 Length=3906 Score = 6196 bits (3355), Expect = 0.0 Identities = 3723/3898 (96%), Gaps = 35/3898 (1%) Strand=Plus/Plus Query 1 ATGAAGAAGCACTTTACGTTACCAAGAAACGCTATCTTACGCGACGGCGGAGAGCCACAC 60 |||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||| ||| Sbjct 21 ATGAAGAAGCACTTTACGCTACCAAGAAACACTATCTTACGCGATGGCGGAGAGCCGCAC 80 Query 61 TCGCCAAACCCTAGTATC-TCGAAATCGAAGCCTCCACGCAAATTAAGATCCGCCAAAGA 119 ||| ||||||||| || | ||||||||||||||||||||||||||||||||||||||||| Sbjct 81 TCGTCAAACCCTAATA-CGTCGAAATCGAAGCCTCCACGCAAATTAAGATCCGCCAAAGA 139 Query 120 AAATGCTCCACCT-CTAGATCGGAACACGTCGACGCCTGACCATAGGTCGATGAGAA-TG 177 ||||||||||||| | |||| |||| || ||| || |||||||||||||||| || || Sbjct 140 AAATGCTCCACCTAC-GGATCAGAACTTGTTGACCCCGGACCATAGGTCGATGA-AATTG 197 Query 178 AAGAATCCGTTG-CCTCCGCGTCCGCCGCCGTCTAATCCTCTTAAACGGAAACTTAGTGC 236 |||| |||| | || |||||||||||||||||||||||||| ||| ||||||| ||||| Sbjct 198 AAGAGTCCG-CGTCCGCCGCGTCCGCCGCCGTCTAATCCTCTCAAAAGGAAACTCAGTGC 256 Query 237 GGA-GACTGCGACGGAATCTGGGTTTTCAGACTCAGGTGTCAAGGTTATAGTTAGAATGA 295 ||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 257 GGATG-CTGCGACGGAATCTGGGTTTTCAGACTCCGGTGTCAAGGTTATAGTTAGAATGA 315 Query 296 AGCCTCTAAACAAAGGGGAGGAAGGTGATATGATAGTAGAAAAGATGTCCAAAGATTCCC 355 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 316 AGCCTCTAAACAAAGGTGAGGAAGGTGATATGATAGTAGAAAAGATGTCCAAAGATTCCC 375 Query 356 TCACAGTTAGTGGACAAACTTTCACATTCGACTCAATTGCAAATCCGGAGTCGACACAGG 415 ||||| || |||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct 376 TCACAATTGGTGGGCAAACTTTCACATTCGACTCAATTGCTTATCCGGAGTCGACACAGG 435 Query 416 AACAAATGTTTC-AGCTTGTGGGAGCCCCTCTTGTTGAAAATTGTCTATCTGGATTTAAC 474 |||||||||||| || | |||||||| ||||||||||||||||||||||||||||||||| Sbjct 436 AACAAATGTTTCAAG-TCGTGGGAGCGCCTCTTGTTGAAAATTGTCTATCTGGATTTAAC 494 Query 475 AGTTCTGTATTTGCTTATGGACAGACTGGTAGTGGAAAAACATATACCATGTGGGGTCCT 534 |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct 495 AGTTCTGTATTTGCCTATGGACAGACTGGTAGTGGGAAAACATATACCATGTGGGGTCCT 554 Query 535 GCAAATGGATTGTTGGAAGAGCACCTCTGCGGTGACCAAAGAGGTTTGACCCCACGTGTC 594 ||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| Sbjct 555 GCATATGGATTGTTGGAAGAGCACCTCCGCGGTGACCAAAGGGGTTTGACCCCACGTGTC 614 Query 595 TTTGAACGATTGTTTGCCCGAATCAAAGAGGAACAAGTCAAGCATGCTGAAAGGCAACTC 654 |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 615 TTTGAACGTTTGTTTGCCCGAATCAAAGAGGAACAAGTCAAGCATGCTGAAAGAAAACTC 674 Query 655 AATTACCAATGTCGGTGCTCATTACTCGAGATTTACAACGAGCAAATAACAGACCTACTG 714 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 675 AATTACCAGTGCCGGTGCTCATTACTCGAGATTTACAACGAGCAAATAACAGACCTACTG 734 Query 715 GACCCAAGCCAGAAAAACCTGATGATTAGAGAAGATGTCAAGTCAGGTGTTTATGTTGAA 774 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 735 GATCCAAGCCAGAAAAACCTGATGATTAGAGAAGATGTCAAGTCAGGTGTTTATGTTGAA 794 Query 775 AATCTGACTGAGGAATACGTAAAAAACTTGACAGACGTGTCACAGCTTCTGATCAAGGGT 834 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct 795 AATCTGACTGAGGAATACGTAAAAAGCTTGACAGACGTGTCACAGCTTCTGATTAAGGGT 854 Query 835 TTGGGAAATAGAAGGACTGGTGCAACGAGTGTAAACACAGAAAGTTCAAGGTCACATTGC 894 ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| Sbjct 855 TTGGGAAATAGAAGGACTGGTGCAACGAGTGTAAATGCAGAGAGTTCAAGGTCACATTGC 914 Query 895 GTATTTACTTGCGTTGTTGAATCTCGGTGCAAGAATGTTGCAGATGGCTTAAGCAGCTTT 954 ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 915 GTATTTACTTGTGTTGTTGAATCTCGGTGCAAGAATGTTGCAGATGGGTTAAGCAGCTTT 974 Query 955 AAGACAAGCCGAATAAACCTTGTTGATCTGGCTGGTTCTGAACGACAAAAATCAACTGGG 1014 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 975 AAAACAAGCCGAATAAACCTTGTTGATCTGGCTGGTTCTGAACGACAAAAATCAACTGGG 1034 Query 1015 GCAGCCGGAGAACGTCTGAAGGAAGCTGGGAACATCAATCGATCGCTCTCTCAGCTGGGG 1074 ||||| |||||||||||||||||||||||||| || |||||||||||||||||||| ||| Sbjct 1035 GCAGCAGGAGAACGTCTGAAGGAAGCTGGGAATATTAATCGATCGCTCTCTCAGCTTGGG 1094 Query 1075 AACTTGATTAACATCCTCGCAGAGATTTCTCAAACAGGGAAGCCAAGGCATATACCTTAC 1134 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1095 AACTTGATTAACATCCTCGCAGAGATTTCTCAAACAGGGAAGCCAAGGCATATACCTTAT 1154 Query 1135 AGGGATTCCAGATTAACATTTTTATTGCAAGAGTCTCTTGGTGGGAATGCAAAGTTAGCA 1194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1155 AGGGATTCCAGATTAACATTTTTATTGCAAGAGTCTCTTGGTGGGAATGCAAAGTTAGCA 1214 Query 1195 ATGGTTTGTGCAGTTTCTCCTTCTCAAAGTTGCAGGAGTGAAACCTTCAGCACCTTGAGA 1254 |||||||||||| |||||||||||||||||||||| || ||||||||||||||||||||| Sbjct 1215 ATGGTTTGTGCAATTTCTCCTTCTCAAAGTTGCAGAAGCGAAACCTTCAGCACCTTGAGA 1274 Query 1255 TTTGCTCAGCGTGCAAAGGCAATACAGAATAAGGCTGTTGTCAATGAAGTGATGCAGGAT 1314 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1275 TTTGCTCAGCGTGCAAAGGCAATCCAGAATAAGGCTGTTGTCAATGAAGTGATGCAGGAT 1334 Query 1315 GATGTAAATTTCTTGCGTGGAGTGATACACCAGCTGAGGGATGAACTACAAAGGATGAAG 1374 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1335 GATGTAAATTTCTTGCGTGGAGTGATACGCCAGCTGAGGGATGAACTACAAAGGATGAAG 1394 Query 1375 AATGATGGAAATAATCCAACCAATCCAAATGTTGCTTATTCCACTGCATGGAATGCACGT 1434 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1395 GATGATGGAAATAATCCAACCAATCCAAATGTTGCTTATTCCACTGCATGGAATGCACGT 1454 Query 1435 AGAAGTTTGAATTTATTAAGAAGCTTCGGTCTGGGTCATCCAAGGTCCTTACCTCATGAA 1494 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1455 AGAAGTTTGAATTTATTAAGAAGCTTCGGTCTGGGTTATCCAAGGTCCTTACCTCATGAA 1514 Query 1495 GATAATGATGGTGATATTGAGATGGAAATTGATGAGGCTGCTGTTGAAAGGCTTTGTGTT 1554 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1515 GATAATGATGGTGATATTGAGATGGAAATTGATGAGGCTGCTGTTGAAAGGCTTTGTGTT 1574 Query 1555 CAAGTGGGTTTGCAATCATCTTTAGCTTCTGAGGGGATCAATCACGATATGAACAGAGTA 1614 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1575 CAAGTGGGTTTGCAATCATCTTTAGCTTCTGAGGGGATCAATCATGATATGAACAGAGTA 1634 Query 1615 AAGAGTATACATTCATCTGATGGCCAATCTATAGAAAAGCGGCTTCCTGAGGACTCAGAT 1674 ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1635 AAGAGTATACATTTATGTGATGGCCAATCTATAGAAAAGCGGCTTCCTGAGGACTCAGAT 1694 Query 1675 GTTGCCATGGAGGATGCTTGTTGCCATACTGAGAACCATGAACCAGAAACCGTGGATAAT 1734 |||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct 1695 GTTGCCATGGTGGATGCTTGTTGCCATTCTGAGAACCATGAACCAGAAACAGTGGATAAT 1754 Query 1735 ATGAGAACTGAGACAGAGACTGGCATCAGAGAAAATCAGATCAAGACACACTCGCAAACT 1794 ||||||||||||||||||||||||||| ||||||||||||||||||||||| | |||| Sbjct 1755 GTGAGAACTGAGACAGAGACTGGCATCACAGAAAATCAGATCAAGACACACT--C-AACT 1811 Query 1795 TTAGATCACGAGTCCAGTTTCCAGCCTCTTTCAGTCAAGGATGCTCTTTGTTCTTCACTG 1854 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1812 TTAGATCACGACTCCAGTTTCCAGCCTCTTTCAGTCAAGGATGCTCTTTGTTCTTCACTG 1871 Query 1855 AACAAGTCAGAGGATGTGTCATCATGCCCTGACTTAGTTCCGCAAGACGTTACTTCAGCA 1914 |||||||| ||||||||| |||||||||||||| | | | |||||||||| | Sbjct 1872 AACAAGTCGGAGGATGTGCCATCATGCCCTGAC--A--T-------A-GTTACTTCAGAA 1919 Query 1915 AATGTATTGATAGCTGATGGAGTAGATGATCCAGAGCACTTAGTAAATTCTGCATCTCCC 1974 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1920 AATGTATTGATAGCTGATGGATTAGATGATCCAGAGCACTTAGTAAATTCTGCATCTCCT 1979 Query 1975 AGTCTTTGTATAGATCCAGTTGGTGCGACTCCTGTATTAAAATCTCCCACACTGAGCGTC 2034 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1980 AGTCTTTGTATAGATCCAGTTGGTGCGACTCCTGTATTAAAATCTCCCACACTGAGTGTC 2039 Query 2035 TCTCCTACGATTAGAAATAGCAGGAAAAGCTTGAAGACATCAGAATTGTCAACAGCATCT 2094 |||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||| Sbjct 2040 TCTCCTACTATTAGAAATAGCAGGAAAAGCTTGAAGACATCGGAAATGTCAACAGCATCT 2099 Query 2095 CAGAAGGATAGTGAAGGAGAAAATTTAGTTACAGAAGCTGCGGACCCATCTCCGGCTACA 2154 ||||||| || ||||||||| ||||||||||||||||||||||| ||||||| ||||||| Sbjct 2100 CAGAAGGGTACTGAAGGAGACAATTTAGTTACAGAAGCTGCGGAACCATCTCTGGCTACA 2159 Query 2155 TCCAAAAAGATGAATAACTGTTCTAGTGCTTTGTCTACGCAGAAGAGCAAAGTTTTTCCT 2214 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 2160 TCCAAAAAGATGAATAACTGTTCTAGTGCTTTGTCTACACAGAAGAGCAAAGTTTTTCCT 2219 Query 2215 GTACGGACTGAGCGGTTGGCATCTAGCCTCCACAAAGGAATTAAACTTCTTGAGTCGTAT 2274 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2220 GTACGGACTGAGCGGTTGGCATCTAGCCTCCACAAAGGAATTAAACTTCTTGAGTCGTAT 2279 Query 2275 TGCCAGAGTACAGCTCAAAGACGATCGACGTACAGGTTTTCCTTCAAAGCTCCAGATAGT 2334 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || Sbjct 2280 TGCCAGAGTACAGCTCAAAGACGATCGACATACAGGTTTTCCTTCAAAGCTCCAGATTGT 2339 Query 2335 GAGCCTTCGACCTCTATAAGTAAGGCTGATGCAGGTGTGCAGACCATTCCCGGAGCTGAT 2394 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2340 AAGCCTTCAACCTCTATAAGTAAGGCTGATGCAGGTGTGCAGACCATTCCCGGAGCTGAT 2399 Query 2395 GCAATATCAGAGGAGAATACAAAAGAGTTTCTGTGCTGTAAATGCAAATGCAGAGAACAA 2454 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct 2400 GCAATATCAGAGGAGAATACAAAAGAGTTTCTGTGCAGTAAATGCAAATGCAGAGAAGAA 2459 Query 2455 TTTGATGCCCAGCAAATGGGTGACATGCCAAATCTTCAGTT---AGTACCTGTTGACAAC 2511 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 2460 TTTGATGCCCAGCAAATGGGTGACATGCCAAATCTTCAGTTTGTAGTACCTGTTGACAAC 2519 Query 2512 TCGGAAGTGGCAGAAAAATCCAAGAATCAAGTTCCCAAAGCAGTAGAAAAGGTTCTAGCA 2571 ||||||||| |||||||| |||||| ||||||||||||||||| ||||||||||||||| Sbjct 2520 TCGGAAGTGACAGAAAAAGCCAAGAGCCAAGTTCCCAAAGCAGTGGAAAAGGTTCTAGCA 2579 Query 2572 GGTTCTATCAGGAGGGAAATGGCTCTGGAAGAGTTCTGCACTAAACAAGCCTCTGAGATA 2631 || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 2580 GGATCTATCAGGAGGGAAATGGCTCTAGAAGAGTTCTGCACTAAACAAGCCTCTGAGATA 2639 Query 2632 ACCCAACTTAACCGACTGGTACAACAATACAAACATGAGAGAGAGTGCAATGCCATCATA 2691 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 2640 ACCCAACTTAACCGACTGGTACAACAATACAAACATGAGAGAGATTGCAATGCCATCATA 2699 Query 2692 GGACAAACAAGGGAGGACAAAATTATTCGCCTTGAAAGCCTTATGGATGGCGTATTATCT 2751 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2700 GGACAAACAAGGGAGGACAAAATTATTCGCCTTGAAAGCCTTATGGATGGCGTATTATCT 2759 Query 2752 AAGGAGGATTTCCTTGATGAAGAATTTGCTTCTCTTCTCCATGAACATAAGCTTCTAAAG 2811 |||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||| Sbjct 2760 AAGGAGGATTTCCTGGATGAAGAATTTGCTTCTCTCCTGCATGAACATAAGCTTCTAAAG 2819 Query 2812 GACATGTATCAGAATCACCCTGAAGTGCTTAAGACGAAGATTGAGTTGGAAAGAACGCAA 2871 ||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct 2820 GACATGTATCAAAATCACCCTGAAGTGCTTCAGACGAAGATTGAGTTGGAAAGAGCGCAA 2879 Query 2872 GAAGAGGTCGAGAATTTCAAGAACTTTTATGGTGACATGGGAGAACGGGAAGTGTTATTG 2931 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 2880 GAAGAGGTCGAGAATTTCAAGAACTTTTATGGTGACATGGGAGAAAGGGAAGTGTTATTG 2939 Query 2932 GAAGAGATTCAGGATTTGAAGTTGCAGCTGCAATGTTACATTGACCCTTCTCTTAAATCA 2991 ||||||||||||||||| ||| ||||||| || ||||||||||||||||||||||||||| Sbjct 2940 GAAGAGATTCAGGATTTAAAGATGCAGCTACAGTGTTACATTGACCCTTCTCTTAAATCA 2999 Query 2992 GCTCTGAAAACGTGTACCCTGCTTAAGCTTTCATACCAAGCTCCCCCAGTTAACGCTATT 3051 |||| |||||||||| ||||||| ||||| ||||||||||||||||||||| | |||||| Sbjct 3000 GCTCGGAAAACGTGTTCCCTGCTAAAGCTATCATACCAAGCTCCCCCAGTTGATGCTATT 3059 Query 3052 CCTGAGTCACAGGACGAGAGTCTTGAGAAGACATTAGAACAGGAAAGACTTTGTTGGACA 3111 ||||| ||||||||| ||||||| | ||||||||||||||||||||||||||||||||| Sbjct 3060 CCTGAATCACAGGACAAGAGTCTCGTGAAGACATTAGAACAGGAAAGACTTTGTTGGACT 3119 Query 3112 GAGGCAGAGACCAAATGGATTTCTCTCTCCGAGGAATTAAGAACTGAGCTTGAAGCCAGT 3171 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 3120 GAGGCAGAGACCAAATGGATTTCTCTCGCCGAGGAATTAAGAACTGAGCTTGAAGCCAGT 3179 Query 3172 AAGGCGCTGATT-AATAAGCAGAAACATGAACTTGAAATTGAGAAAAGATGCGGGGAGGA 3230 |||| |||| || |||||||||||||||||||||||||||||||||||||| ||||| || Sbjct 3180 AAGGTGCTG-TTGAATAAGCAGAAACATGAACTTGAAATTGAGAAAAGATGTGGGGAAGA 3238 Query 3231 GTTGAAAGAAGCAATGCAGATGGCCATGGAAGGGCATGCACGGATGCTTGAACAATATGC 3290 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3239 GTTGAAAGAAGCAATGCAGATGGCCATGGAAGGGCATGCACGGATGCTTGAACAATATGC 3298 Query 3291 AGACCTGGAAGAGAAGCATATGCAATTGCTTGCAAGACATAGAAGGATTCAAGACGGAAT 3350 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 3299 AGACCTGGAAGAGAAGCATATGCAATTGCTTGCTAGACATAGAAGGATTCAAGACGGAAT 3358 Query 3351 AGATGATGTCAAAAAGGCAGCTGCAAGAGCTGGAGTCAGAGGAGCAGAGTCCAGATTCAT 3410 ||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||| Sbjct 3359 AGATGATGTCAAAAAGGCAGCGGCAAGAGCCGGAGTCAGAGGAGCAGAGTCCAAATTCAT 3418 Query 3411 AAATGCACTTGCAGCAGAAATTTCAGCCTTAAAGGTAGAAAAAGAGAAGGAGAGACAATA 3470 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3419 AAATGCACTTGCAGCAGAAATTTCAGCCTTAAAGGTAGAAAAAGAGAAGGAGAGACAATA 3478 Query 3471 CCTGAGGGATGAGAACAAAAGTCTCCAAACACAACTAAGAGATACAGCTGAAGCCATACA 3530 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3479 CTTGAGGGATGAGAACAAAAGTCTCCAAACACAACTAAGAGATACAGCTGAAGCCATACA 3538 Query 3531 AGCAGCTGGAGAGTTACTTGTTCGGCTTAAAGAAGCCGAAGAGGGATTAACAGTTGCACA 3590 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3539 AGCAGCTGGAGAATTACTTGTTCGGCTTAAAGAAGCCGAAGAGGGATTAACAGTTGCACA 3598 Query 3591 GAAACGTGCGATGGATGCAGAGTATGAAGCTGCAGAAGCATATAGACAGATTGACAAGCT 3650 |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3599 GAAACGCGCAATGGATGCAGAGTATGAAGCTGCAGAAGCATATAGACAGATTGACAAGCT 3658 Query 3651 GAAGAAGAAACATGAAAACGAAATCAACACACTTAACCAACTCGTCCCACAATCTCATAT 3710 ||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct 3659 GAAGAGGAAACATGAAAACGAAATCAACACTCTTAACCAACTCGTCCCTCAATCTCATAT 3718 Query 3711 TCACAATGAATGCTCTACCAAATGTGATCAAGCCGTGGAACCATCAGTAAATGCAAGTAG 3770 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 3719 TCACAATGAATGCTCTACCAAATGTGATCAAGCCGTGGAACCATCAGAAAATGCAAGT-G 3777 Query 3771 TGAGCAGCAATGGAGAGATGAGTTTGAGCCGCTTTACAAAAAAGAAACTGAGTTTTCAAA 3830 ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| Sbjct 3778 --AGCAGCAATGGAGAGATGAATTTGAGCCGCTTTACAAAAAAGAAACCGAGTTTTCAAA 3835 Query 3831 TCTTGCTGAGCCTTCTTGGTTTTCGGGTTATGATAGGTGCAACATATAATTCTAATAT 3888 |||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct 3836 TCTTGCTGAGCCCTCTTGGTTTTCGGGTTACGATCGGTGCAACATATAATTCTAATAT 3893 > Ahg930410 jgi|Araly1|930410|scaffold_302867.1 Length=3973 Score = 1471 bits (796), Expect = 0.0 Identities = 1381/1660 (83%), Gaps = 53/1660 (3%) Strand=Plus/Plus Query 6 GAAGCACTTT-ACGTTACCAAGAAACGCTATCTT-ACGCGACGGCGGAGAGCCACACTCG 63 |||||| ||| | | | |||||||||||| |||| | | || |||||| |||| ||| Sbjct 23 GAAGCA-TTTCATGATGCCAAGAAACGCTGTCTTGA-GGGATATTGGAGAGTCACAATCG 80 Query 64 CCAAACCCTAGTATCTCGAAATCGAAGCCTCCACGCAA-ATTAAGATCCGCCAAAGAAAA 122 |||||| ||||| | |||||||||| | | | | || ||| ||||| || ||||| || Sbjct 81 CCAAACACTAGTTTGACGAAATCGAAATCACAAAGAAAGATT-AGATCTGCTAAAGAGAA 139 Query 123 TGCTCCACCTCTAGATCGGAACACGTCGACGCCTGACCATAGGTC-GAT---GAG-AA-T 176 ||||||||||| |||| |||| ||| | |||||| ||||| || | | | || | Sbjct 140 TGCTCCACCTCCGGATCTGAACTCGTTGTTGCCTGATCATAGATCTTCTCCGGCGAAATT 199 Query 177 GAAGAATCCGTTGCCTCCGCGTCCGCCGCCGTCTAATCCTCTTAAACGGAAACTTAGTGC 236 ||||| ||| |||||||||||||| ||| |||||||||||||||||||||| || | ||| Sbjct 200 GAAGAGTCCTTTGCCTCCGCGTCCTCCGTCGTCTAATCCTCTTAAACGGAAGCTAATTGC 259 Query 237 GGAGACTGC----G---ACGGA--A--T-CTGGGTTTTCAGACTCAGGTGTCAAGGTTAT 284 ||| |||| | | ||| | | ||||| |||||||||| |||||||||||||| Sbjct 260 TGAGGCTGCGGGGGAAAATGGAGTAGCTGCTGGGGTTTCAGACTCTGGTGTCAAGGTTAT 319 Query 285 AGTTAGAATGAAGCCTCTAAACAAAGGGGAGGAAG-GTGATATGATAGTAGAAAAGATGT 343 ||| ||||||||||||| || |||||| ||||||| | || ||||||||| ||||||| | Sbjct 320 AGTCAGAATGAAGCCTCCAAGCAAAGGTGAGGAAGAG-GAGATGATAGTAAAAAAGATCT 378 Query 344 CCAAAGATTCCCTCAC-AGTTAGTGGACAAACTTTCACATTCGACTCAATTGCAAATCCG 402 |||| ||| ||||||| | ||| || ||| |||||||||||||| || ||||| | || Sbjct 379 CCAACGATGCCCTCACTA-TTAATGAACAGACTTTCACATTCGATTCGATTGCTGACCCA 437 Query 403 GAGTCGACACAGGAACAAATGTTTCAGCTTGTGGGAGCCCCTCTTGTTGAAAATTGTCTA 462 ||||| |||||||| | || |||||||||||||||||||||||||| ||||| ||||| Sbjct 438 GAGTCAACACAGGATGAGATCTTTCAGCTTGTGGGAGCCCCTCTTGTAGAAAACTGTCTG 497 Query 463 TCTGGATTTAACAGTTCTGTATTTGCTTATGGACAGACTGGTAGTGGAAAAACATATACC 522 | ||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||| Sbjct 498 GCCGGATTTAACAGTTCTGTTTTTGCCTATGGACAGACTGGTAGTGGGAAAACATATACC 557 Query 523 ATGTGGGGTCCTGCAAATGGATTGTTGGAAGAGCACCTCT-GCGGTGACCAAAGAGGTTT 581 |||||||||||||| ||||||||||||||||||||||| | | ||||||||||||||||| Sbjct 558 ATGTGGGGTCCTGCCAATGGATTGTTGGAAGAGCACCT-TAGTGGTGACCAAAGAGGTTT 616 Query 582 GACCCCACGTGTCTTTGAACGATTG-T-TT-GCCCGAATCAAAGAGGAACAAGTC-AAGC 637 ||| ||||||||||||| | |||| | || ||||| ||| ||||| |||| | |||| Sbjct 617 GACACCACGTGTCTTTG-A--ATTGCTCTTCGCCCGTCTCAGTGAGGAGCAAG-CAAAGC 672 Query 638 ATGCTGAAAGGCAACTCAATTACCAATGTCGGTGCTCATTACTCGAGATTTACAACGAGC 697 ||||||||||||| || || ||||| || || || || || |||||||| |||||||| | Sbjct 673 ATGCTGAAAGGCAGCTAAAGTACCAGTGCCGCTGTTCGTTTCTCGAGATATACAACGAAC 732 Query 698 AAATAACAGACCTACTGGACCCAAGCCAGAA-AAACCTGATGATTAGAGAAGATGTCAAG 756 |||||||||| || |||| || ||||| || |||||||||||||||||||||||||||| Sbjct 733 AAATAACAGATCTTTTGGATCCGAGCCA-AAGAAACCTGATGATTAGAGAAGATGTCAAG 791 Query 757 TCAGGTGTTTATGTTGAAAATCTGACTGAGGAATACGTAAAAAACTTGACA-GACGTGTC 815 || ||||||||||||||||||||||||||||| ||||| |||||||||| | || |||| Sbjct 792 TCCGGTGTTTATGTTGAAAATCTGACTGAGGAGTACGTGAAAAACTTGA-AGGATTTGTC 850 Query 816 ACAGCTTCTGATCAAGGGTTTGGGAAATAGAAGGACTGGTGCAACGAGTGTAAACACAGA 875 | |||||||| | ||||| |||| ||| ||||||||||||||||| ||||||||| |||| Sbjct 851 AAAGCTTCTGGTTAAGGGCTTGGCAAACAGAAGGACTGGTGCAACAAGTGTAAACGCAGA 910 Query 876 AAGTTCAAGGTCACATTGCGTATTTACTTGCGTTGTTGAATCTCGGTGCAAGAATGTTGC 935 ||||||||||| ||||| ||||||||||| ||||| || || | ||||||| |||||| Sbjct 911 GAGTTCAAGGTCGCATTGTGTATTTACTTGTGTTGTCGAGTCCCACTGCAAGAGTGTTGC 970 Query 936 AGATGGCTTAAGCAGCTTTAAGACAAGCCGAATAAACCTTGTTGATCTGGCTGGTTCTGA 995 |||||| ||||||||||| || ||||| |||| || |||||||||||||||||||| || Sbjct 971 AGATGGTTTAAGCAGCTTCAAAACAAGTAGAATCAATCTTGTTGATCTGGCTGGTTCAGA 1030 Query 996 ACGACAAAAATCAACTGGGGCAGCCGGAGAACGTCTGAAGGAAGCTGGGAACATCAATCG 1055 | | ||||||| ||| || ||||| || || ||| |||||||||||||||| || ||||| Sbjct 1031 AAGGCAAAAATTAACCGGTGCAGCAGGCGATCGTTTGAAGGAAGCTGGGAATATAAATCG 1090 Query 1056 ATCGCTCTCTCAGCTGGGGAACTTGATTAACATCCTCGCAGAGATTTCTCAAACAGGGAA 1115 ||| || || || || ||||| ||||| ||||| || ||||| ||||| ||||||||||| Sbjct 1091 ATCACTTTCCCAACTTGGGAATTTGATCAACATTCTAGCAGAAATTTCACAAACAGGGAA 1150 Query 1116 GCCAAGGCATATACCTTACAGGGATTCCAGATTAACATTTTTATTGCAAGAGTCTCTTGG 1175 || ||| |||||||| || || |||||||| || |||||| |||| ||||||||||| || Sbjct 1151 GCAAAGACATATACCCTATAGAGATTCCAGGTTGACATTTCTATTACAAGAGTCTCTAGG 1210 Query 1176 TGGGAATGCAAAGTTAGCAATGGTTTGTGCAGTTTCTCCTTCTCAAAGTTGCAGGAGTGA 1235 |||||||||||| ||||| |||||||||||||||||||| || |||||||| |||| ||| Sbjct 1211 TGGGAATGCAAAATTAGCTATGGTTTGTGCAGTTTCTCCCTCGCAAAGTTGTAGGAATGA 1270 Query 1236 AACCTTCAGCACCTTGAGATTTGCTCAGCGTGCAAAGGCAATACAGAATAAGGCTGTTGT 1295 ||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||| Sbjct 1271 AACCTTCAGCACCTTGAGATTTGCTCAGCGTGCAAAGGCGATACAGAACAAGGCAGTTGT 1330 Query 1296 CAATGAAGTGATGCAGGATGATGTAAATTTCTTGCGTGGA-GTGATACACCAGCTGAGGG 1354 ||||||||| ||||| |||||||||||||||||||| ||| ||||||| ||||||||||| Sbjct 1331 CAATGAAGTAATGCAAGATGATGTAAATTTCTTGCG-GGAAGTGATACGCCAGCTGAGGG 1389 Query 1355 ATGAACTACAAAGGATGAAG-A-A-TGATGGAAATAATCCAACCAATCCAAATGTTGCTT 1411 ||||||| |||||| ||||| | | | ||||||| || ||||| || ||||||| |||| Sbjct 1390 ATGAACTGCAAAGGGTGAAGGATAATAATGGAAACAACCCAACAAACCCAAATGCAGCTT 1449 Query 1412 ATTCCACTGCATGGAATGCACGTAGAAGTTTGAATTTATTAAGAAGCTTCGGTCTGGGTC 1471 || ||||| | |||||||| ||||||||| ||| ||| ||||||||||| || ||||||| Sbjct 1450 ATACCACTTCCTGGAATGCGCGTAGAAGTCTGAGTTTGTTAAGAAGCTTTGGCCTGGGTC 1509 Query 1472 ATCCAAGGTCCTTACCTCATGAAGATAATGATGGTGATATTGAGATGGAAATTGATGAGG 1531 |||||| ||| ||||| ||| |||| ||||||| || | ||||||||||||||| |||| Sbjct 1510 ATCCAAAGTCATTACCAAATGGAGATGATGATGGGGACACTGAGATGGAAATTGACGAGG 1569 Query 1532 CTGCTGTTGAAAGGCTTTGTGTTCAAGTGGGTTTGCAATCATCTTTAGCTTCTGAGGGGA 1591 ||||||||||||||||||| |||| ||| ||| || || | || | |||| | Sbjct 1570 AGGCTGTTGAAAGGCTTTGTGCTCAAAAGGGCTTG---TC-TCC--ACCTGCCGAGGACA 1623 Query 1592 TCAATCACGATATGAACAGAGTAAAGAGTATACATTCATC 1631 |||||| || |||| ||||||| ||| ||| ||||||| Sbjct 1624 ACAATCAGGACATGAGCAGAGTAGAGAAAATAAATTCATC 1663 Score = 1319 bits (714), Expect = 0.0 Identities = 1408/1736 (81%), Gaps = 76/1736 (4%) Strand=Plus/Plus Query 2003 CTCCTGTATTAAAATCTCCCACACTGAGCGTCTCTCCTACGATTAGAAATAGCAGGAAAA 2062 |||||| | ||| | ||||||| ||||| |||||||| ||| |||||||||||||||| Sbjct 2041 CTCCTGGACTAATACCTCCCACTGAGAGCGCCTCTCCTAAGATCAGAAATAGCAGGAAAA 2100 Query 2063 GCTTGAAGACATCA-GAATTGTCAACAGCATCTCAGAAGGATAGTGAAG-GAG-AAA--A 2117 |||||| |||| || || |||| || ||||| || || ||| || || ||| ||| | Sbjct 2101 GCTTGAGGACAACATCAA-TGTCCACCGCATCACAAAAAAATATTG-AGAGAGCAAACCA 2158 Query 2118 TTTAGTTACAGAAGCTGCGGACCCATCTCCGGCTACATCCAAAAAGATGAAT-AA-CTGT 2175 ||| || ||||| || ||| || |||||||||| |||| | || || | || || Sbjct 2159 GTTAACTAAAGAAGTTGTGGAACCTTCTCCGGCTATGTCCACAGAGGTG-TTAAACCT-A 2216 Query 2176 TCTAGTGCTTTGTCTACGCAGAAGAGCAAAGTTTTTCCTGTACGGACTGA-GCGGTTGGC 2234 | ||||||||||||||| |||| || ||| ||||||||| | ||| | | ||||| Sbjct 2217 TATAGTGCTTTGTCTACAAAGAAAAGTGAAGCTTTTCCTGTGCCAACT-AGGTAATTGGC 2275 Query 2235 ATCTAGCCTCCACAAAGGAATTAAACTTCTTGAGTCGTATTGCCAGAGTACAGCTCAAAG 2294 | ||||||| |||| ||| || ||||||||||| || || | |||||||||||||| || Sbjct 2276 AGCTAGCCTTCACAGAGGCATGAAACTTCTTGACTCATACCGGCAGAGTACAGCTCATAG 2335 Query 2295 ACGATCGACGTACAGGTTTTCCTTCAAAGCTCCAG-ATAGTGAGCCTTCGACC-TCTATA 2352 ||||||||| | ||| || |||| |||||||| || || | |||| || ||| | | || Sbjct 2336 ACGATCGACATTCAGATTGTCCTACAAAGCTCTAGAAT-GCAAGCCCTCAACCGT-TTTA 2393 Query 2353 AGTAAGGCTGATGCAGGTGTGCAGACCATT-CCCGG-AGCTGATGCAATATCAGAGGAGA 2410 ||||||||||||| |||||| || | | || |||| ||||||| | || | || || | Sbjct 2394 AGTAAGGCTGATGTAGGTGTTCA-AAC-TTATCCGGAAGCTGATACTGTAGCGGAAGACA 2451 Query 2411 ATACAAAAG-AGTTTCTGTGCTGTAAATGCAAATGCAGAGAACAATTTGATGCCC-AGCA 2468 | | |||| || | |||||| ||||||| |||||||||| | ||| |||||||| || | Sbjct 2452 ACCCCAAAGAAG-TACTGTGCAGTAAATGTAAATGCAGAGCAGAATGTGATGCCCAAG-A 2509 Query 2469 AATGGGTGACA-TGCCAAATCTTCAGTTAGTACCTGTTGACAACTCGGAA-GTGGCAGAA 2526 ||| |||||| | | |||||||||||||||||| |||||||||| ||| || ||||| Sbjct 2510 AATAAGTGACACT-TCTAATCTTCAGTTAGTACCTATTGACAACTCAGAAGGT-TCAGAA 2567 Query 2527 AAATCCAAGAAT-CAAGTTCCCAAAGCAGTAGAAAAGGTTCTAGCAGGTTCTATCAGGAG 2585 || ||||| | |||||||| |||||||| ||||||||||||||||| |||||||| || Sbjct 2568 AAGTCCAA-TTTCCAAGTTCCTAAAGCAGTGGAAAAGGTTCTAGCAGGGTCTATCAGAAG 2626 Query 2586 GGAAATGGCTCTGGAAGAGTTCTGCACTAAACAAGCCTCTGAGATAACCCAACTTAACCG 2645 ||||||||| |||| ||| |||||||||| ||||| ||||| ||| | || ||||| || Sbjct 2627 AGAAATGGCTATGGAGGAGGTCTGCACTAAGCAAGCATCTGAAATATCACAGCTTAATCG 2686 Query 2646 ACTGGTACAACAATACAAACATGAGAGAGAGTGCAATGCCATCATAGGACAAACAAGGGA 2705 ||||| ||||| ||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct 2687 GCTGGTGCAACAGTACAAGCATGAGAGAGAATGCAATGCCATCATAGGACAAACAAGGGA 2746 Query 2706 GGACAAAATTATTCGCCTTGAAAGCCTTATGGATGGCGTATTATCTAAGGAGGATTTCCT 2765 |||||| ||| ||||||||||||| || ||||||||||| || ||||| || |||||||| Sbjct 2747 GGACAAGATTGTTCGCCTTGAAAGTCTCATGGATGGCGTGTTGTCTAAAGATGATTTCCT 2806 Query 2766 TGATGAAGAATTTGCTTCTCTTC-TCCATGAACATAAGCTTCTAAAGGACATGTATCAGA 2824 |||||||||||||| || || | | ||||| ||||||||||| |||||||||||| ||| Sbjct 2807 GGATGAAGAATTTGCATCACT-CATGCATGAGCATAAGCTTCTGAAGGACATGTATGAGA 2865 Query 2825 ATCACCCTGAAGTGCTTA-AGACGAAGATTGAGTTGGAAA-GAACGCAAGAAGAGGTCGA 2882 | ||||| ||||| || |||||| |||||||||| ||| || |||||||||| |||| Sbjct 2866 ACCACCCCGAAGTA-TTGCAGACGAGGATTGAGTTG-AAACGAGTGCAAGAAGAGCTCGA 2923 Query 2883 GAA-TTTCAAGAACTTTTATGGTGACATGGGAGAACGGGAAGTGTTATTGGAAGAGATTC 2941 || |||||||||||| || ||||||||||||||| ||||||| ||||| |||||||||| Sbjct 2924 -AAGTTTCAAGAACTTCTACGGTGACATGGGAGAAAGGGAAGTATTATTAGAAGAGATTC 2982 Query 2942 AGGATTTGAAGTTGCAGCTGCAATGTTACATTGACCCTTCTCTTAAATCAGCTCTGAAAA 3001 | ||||| ||| |||||| |||||||||| |||| ||||||||| ||| |||| ||||| Sbjct 2983 ACGATTTAAAGGCGCAGCTACAATGTTACACTGACTCTTCTCTTACATCTGCTCGGAAAA 3042 Query 3002 CGTG-TACCCTGCTTAAGCT----T----T-----C--ATACCAAGCTCCCCCAGTTAAC 3045 | | | ||||||||||||| | | | | |||||||| | ||| |||| Sbjct 3043 -GAGGTTCCCTGCTTAAGCTAACATACGCTTGTGACCGAGACCAAGCTTCACCACTTAAT 3101 Query 3046 GCTATTCCTGAGTCACAGGACGAGAGTCTTGAGAAGACATTAGAACAGGAAAGACTTTGT 3105 | |||||||||||| ||||||| ||| |||||||||| ||||||||||||||||| || Sbjct 3102 ACCATTCCTGAGTCAGTGGACGAGTGTCCTGAGAAGACACTAGAACAGGAAAGACTTCGT 3161 Query 3106 TGGACAGAGGCAGAGACCAAATGGATTTCTCTCTCC-GAGGAATTAAGAACTGAGCTTGA 3164 | ||| || ||||||| ||| ||||| ||||| | | || ||||| ||||| |||||||| Sbjct 3162 TAGACTGAAGCAGAGAGCAACTGGATCTCTCT-TGCTGAAGAATTGAGAACCGAGCTTGA 3220 Query 3165 -AGCCAGTA-AGGCGCTGATT-AATAAGCAGAAACATGAACTTGAAATTGAGAAAAGATG 3221 | ||| || | ||| || || |||||||||| |||||| || | ||||||||||| Sbjct 3221 TA-CCAATAGATT-GCTAATGGAA-AAGCAGAAACGTGAACTGGATACAGAGAAAAGATG 3277 Query 3222 CGGGGAGGAGTTGAAAGAAGCAATGCAGATGGCCATGGAAGGG-CATGCACGGATGCTTG 3280 | || ||||||| |||||||||||| ||||| ||| | ||| |||||||||||| ||| Sbjct 3278 TGCTGAAGAGTTGACAGAAGCAATGCAAATGGCGATGCA-GGGTCATGCACGGATGATTG 3336 Query 3281 AACAATATGCAGACCTGGAAGAGAAGCATATGCAATTGCTTGCAAGACATAGAAGGATTC 3340 |||| |||||||||||||||||||||||||| |||||||||||||| ||||| ||||||| Sbjct 3337 AACAGTATGCAGACCTGGAAGAGAAGCATATCCAATTGCTTGCAAGGCATAGGAGGATTC 3396 Query 3341 AAGACGGAATAGATGATGTCAAAAAGGCAGCTGCAAGAGCTGGAGTCAGAGGAGCAGAGT 3400 ||| |||||||||||||| ||||| ||||| || ||||| ||||||| |||||| |||| Sbjct 3397 GAGAAGGAATAGATGATGTAAAAAAAGCAGCAGCCAGAGCAGGAGTCAAAGGAGCTGAGT 3456 Query 3401 CCAGATTCATAAATGCACTTGCAGCAGAAATTTCAGCCTT-AAAGGTAGAAAA-AGAGAA 3458 | ||||||||||| ||||||||||| ||||||||||| || |||| | | ||| |||||| Sbjct 3457 CTAGATTCATAAACGCACTTGCAGCTGAAATTTCAGCTTTGAAAG-T-GCAAAGAGAGAA 3514 Query 3459 GGAGAG-ACAATACCTGAGGGATGAGAACAAAAGTCTCCAAACACAACTAAGAGATACAG 3517 |||| | ||||||| | |||||||| ||||| |||||||| ||||||||||||||| | Sbjct 3515 GGAG-GCACAATACTTCAGGGATGAAAACAAGAGTCTCCAGTTACAACTAAGAGATACTG 3573 Query 3518 CTGAAGCCATACAAGCAGCTGGAGAGTTACTTGTTCGGCTTAAAGAAGCCGAAGAGGGAT 3577 ||||||| | |||||||| ||||||||||||||||| ||||||||||| ||||| |||| Sbjct 3574 CTGAAGCTGTTCAAGCAGCAGGAGAGTTACTTGTTCGACTTAAAGAAGCTGAAGAAGGAT 3633 Query 3578 TAACAGTTGCACAGAAACGTGCGATGGATGCAGAGTATGAAGC-TGCAGAAGCATATAGA 3636 | ||| ||||||||||||| || |||||||||||||||||||| | |||||| ||||| | Sbjct 3634 TGACATTTGCACAGAAACGGGCAATGGATGCAGAGTATGAAGCAT-CAGAAGTATATAAA 3692 Query 3637 CAGATTGACAAGCTGAAGAAGAAACATGAAAAC-GAAATCAACACACTTAACCAAC 3691 |||| |||||| |||||| |||| | |||| | |||| || ||| | ||||||| Sbjct 3693 AAGATGGACAAGTTGAAGAGGAAATACGAAA-CTGAAACCAGCACTGTAAACCAAC 3747 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 149375974025 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5