BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT4G14920.1 Length=3531 Score E Sequences producing significant alignments: (Bits) Value Ahg330015 jgi|Araly1|330015|fgenesh1_pm.C_scaffold_7002242 1295 0.0 Ahg891063 jgi|Araly1|891063|Al_scaffold_0007_3049 407 3e-112 Ahg896218 jgi|Araly1|896218|Al_scaffold_0005_184 353 4e-96 > Ahg330015 jgi|Araly1|330015|fgenesh1_pm.C_scaffold_7002242 Length=3027 Score = 1295 bits (701), Expect = 0.0 Identities = 797/844 (94%), Gaps = 3/844 (0%) Strand=Plus/Plus Query 638 AGAAGAAGTACAAGCGTGACATGAATTTTGATGAACCAATCAGGGTGCAGGGGAAAAATG 697 ||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct 554 AGAGGAAGTACAAGCGTGAAATGAATTTTGATGAACCAATTAGGGTGCAGGGGAAAAATG 613 Query 698 GTGTCCTCAAGGTGATGGTGAACAAGCAGAATAAGATAGGAGGGTTACTGCAAAATGCGA 757 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 614 GTGTCCTCAAGGTGATGGTGAACAAGCAGAATAAGGTAGGAGGGTTACTGCAAAATGCGA 673 Query 758 AAGCTGAACAAACTCAATGTGGCTCAACGATTCAAGAGACTGGTAAAATACGTGTTGCTA 817 ||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct 674 AAGCTGAACAATCTCAATATGGCTCAAAGATTCAAGAGACTGGTAAAATACGTGTTGCTA 733 Query 818 TCCAGTTGCCAAACACTTTAAAAACTGAAAAGTTGCCGAAACTGCCTCCCCCAGCCAGAA 877 |||||| ||||| |||||||||||||||||||||||||||||||| |||||| | ||||| Sbjct 734 TCCAGTCGCCAACCACTTTAAAAACTGAAAAGTTGCCGAAACTGCTTCCCCCGGTCAGAA 793 Query 878 TACAGTCAAATGGGCTAAAACTGCCCATGTCCTTAACCATGAAGAGTAAGGGACAGAACC 937 ||||||| |||||| ||||| |||| ||||||||| |||||||||||||||||||| ||| Sbjct 794 TACAGTCGAATGGGTTAAAAATGCCTATGTCCTTACCCATGAAGAGTAAGGGACAGGACC 853 Query 938 AAGATTCTGAAGATAGTGATAGCTCGGGCCGGCTGCAGAAAAGAATAATACAACCTCATA 997 |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct 854 AAGATTCTGAAGATAGTGATAGCTCGGGGCGGCTGCAGAAGAGAATAATACAACCTCATA 913 Query 998 AGCCCTCTCAGATGTCAAGCACTGGAGGAGAAAAGACATTACCTGAAGCGTCAATGCCTT 1057 |||||||||| ||||||||||||||||||||||| || |||||||||| ||||||||||| Sbjct 914 AGCCCTCTCATATGTCAAGCACTGGAGGAGAAAATACTTTACCTGAAGTGTCAATGCCTT 973 Query 1058 CCAAAATTAGAGATGGAAAGATTAGGCGTGGTTCAGGCACAGAAAAACAAAGATTACGTG 1117 | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 974 CAAAAATCAGAGATGGAAAGATTAGGCGTGGTTCAGGCACAGAAAAACAAAGATTACGTG 1033 Query 1118 AGCGAATTAGGGAAATGTTACTGGAAGCAGGGTGGACGATTGACTACAGACCTAGGAGGA 1177 ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct 1034 AGCGAATCAGGGAAATGTTACTGGAAGCAGGGTGGACGATTGACTATAGACCTAGGAAGA 1093 Query 1178 ATAGAGACTACCTAGATGCAGTTTATATAAGTCCCAGGGGAACAGCGTATTGGTCTATTA 1237 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1094 ATAGAGACTACCTAGATGCAGTTTATATAAGTCCCAGGGGAACAGCGTATTGGTCTATTA 1153 Query 1238 TCAAGGCTTATGAAGCACTTCTGAAGCAGTTAAATAGTGGGGAAAAAGTTGCCAAGCCTT 1297 | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1154 TAAAGGCTTATGAAGCACTTCTGAAGCAGTTAAATAGTGGGGAAAAAG---CCAAGCCTT 1210 Query 1298 GTGACGATAGTTCCACATTTTCTCTGATATCAGATGAGATACTCAGTCAGTTAACAAGGA 1357 |||| ||||||||||||||| | ||||| || |||||||||||||||||||||||||||| Sbjct 1211 GTGAAGATAGTTCCACATTTACGCTGATCTCCGATGAGATACTCAGTCAGTTAACAAGGA 1270 Query 1358 AAACCAAAAGTAAGATTGAAAAAGATATGAAAAGGGAGCTACACTCTGCCAGTGATAGTG 1417 |||||||||| ||||||||||||||||||||||| ||| ||| |||||||||||||| | Sbjct 1271 AAACCAAAAGAAAGATTGAAAAAGATATGAAAAGTGAGGAACAATCTGCCAGTGATAGCG 1330 Query 1418 ATGGAAAAGCGACTTTTGCAAGGAATTTCCTAGCTATTAAAAATGAAGTAGGAAACGATG 1477 ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct 1331 TTGGAAAAGCGACTTTTGCAAGAAATTTCTTAGCTATTAAAAATGAAGTAGGAAACGATG 1390 Query 1478 ACAG 1481 |||| Sbjct 1391 ACAG 1394 Score = 1018 bits (551), Expect = 0.0 Identities = 595/616 (97%), Gaps = 4/616 (1%) Strand=Plus/Plus Query 1532 ACAGCAGAGATAGTTCACA-GGGTACAACTTCAAAAAGTGAAAGCCCTTTGCATCACCAA 1590 ||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||| Sbjct 1391 ACAGCAGAGATAGTTCA-AGGGGTACAACTTCAAAAAGTGCAAGCCCTTTGCATCACCAA 1449 Query 1591 ACTGAAAAGTCAACTGGTTCCTCCTCTCACCGTGTGGATGGAGGGAAAAGTAGCAAACAT 1650 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1450 ACTGAAAAGTCAACTGGTTCCTCCTCTCACCGTGTGGATGGAGGGAAAAGTAGCAAACAT 1509 Query 1651 GGTAGGAGTACACTGTTGGTGCGGCGTTCAGTCAGAGGAGATAATTCAGA-GAGTGATGG 1709 ||||||||||| |||| ||| |||||| |||||||||||||||||||||| || |||||| Sbjct 1510 GGTAGGAGTACGCTGTCGGTACGGCGTCCAGTCAGAGGAGATAATTCAGAGGA-TGATGG 1568 Query 1710 TTTTGTACCCTCATCTGAAAAACGGACGGTACTGGCATGGCTGATTGATAGTGGAACCTT 1769 |||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct 1569 TTTTGTTCCCTCATCTGAAAAACAGACGATACTGGCATGGCTGATTGATAGTGGAACCTT 1628 Query 1770 ACAGTTGAGTGAAAAGGTAATGTACATGAACCAACGCCGGACACGCGCCATGCTTGAGGG 1829 | |||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||| Sbjct 1629 AAAGTTGAGTGAAAAGGTGATGTACATGAACCAACGACGGACACGCGCAATGCTTGAGGG 1688 Query 1830 TTGGATAACAAGAGACGGGATTCACTGTGGTTGCTGTAGTAAAATTCTTGCGGTTTCGAA 1889 ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct 1689 TTGGATAACAAGAGACGGGATTCACTGTGGTTGCTGTAGTAAAATTCTTTCAGTTTCAAA 1748 Query 1890 GTTTGAGATACATGCTGGAAGCAAATTGCGGCAGCCATTTCAGAACATATTTTTGAATTC 1949 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1749 GTTTGAGATACATGCTGGAAGCAAATTGCGGCAGCCATTTCAGAACATATTTTTGAATTC 1808 Query 1950 TGGGGTTTCTCTTCTTCAATGCCAAATAGATGCATGGGATAAGCAAAAGGGTGCTGGGAA 2009 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1809 TGGGGTTTCTCTTCTTCAATGCCAAATAGATGCATGGGATAAGCAAAAGGGTGCTGGGAA 1868 Query 2010 CATTGGTTTTTGTTCAGTAGATGTAATTGCTGATGATCCAAATGACGATGCTTGTGGTAT 2069 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || Sbjct 1869 CATTGGTTTTTGTTCGGTAGATGTAATTGCTGATGATCCAAATGACGATGCTTGTGGCAT 1928 Query 2070 TTGTGGAGATGGAGGTGATTTAGTTTGCTGTGATGGTTGTCCCTCAACTTTCCACCAAAG 2129 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1929 TTGTGGAGATGGAGGTGATTTAGTTTGCTGTGATGGTTGTCCCTCAACTTTCCACCAAAG 1988 Query 2130 ATGCCTAGACATACGG 2145 |||||||||||||||| Sbjct 1989 ATGCCTAGACATACGG 2004 Score = 678 bits (367), Expect = 0.0 Identities = 408/428 (95%), Gaps = 2/428 (0%) Strand=Plus/Plus Query 2353 CTCTCCGAAGGTGTCAAGAAGTATGTTGGTGTCAAACATGAGTTGGAAGCTGGATTTTCA 2412 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2167 CTCTCCGAAGGTGTCAAGAAGTATGTTGGTGTCAAACATGAGTTGGAAGCTGGATTTTCA 2226 Query 2413 TGGTCTCTAGTTCATAGGGAATGCACAAATTCAGATTTATCCTTAAGTGGACACCCTCAT 2472 ||||||||||||||||||||||| || |||||||||||| |||| ||| |||||||||| Sbjct 2227 TGGTCTCTAGTTCATAGGGAATGTGCAGATTCAGATTTATTCTTAGGTGAACACCCTCAT 2286 Query 2473 ATTGTGGAAAACAATTCCAAGCTTGCATTAGCTTTGACAGTCATGGATGAATGCTTTCTG 2532 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 2287 ATTGTGGAAAACAATTCCAAGCTTGCATTAGCTCTGACAGTCATGGATGAATGCTTTCTG 2346 Query 2533 CCCATTATTGACAGGAGGAGTGGGGTGAATATAGTACAAAATGTCCTTTACAATTGTGGG 2592 |||||| ||||||| || ||||||||||||||||||| |||||||||||||||||||||| Sbjct 2347 CCCATTGTTGACAGAAGAAGTGGGGTGAATATAGTACGAAATGTCCTTTACAATTGTGGG 2406 Query 2593 TCCAACTTCAATCGGCTGAACTTTGGTGGATTCTATACTGCTCTTCTTGAAAGAGGCGAC 2652 || ||||| || ||||||||||| |||||||||||||||||||||||||| ||||||||| Sbjct 2407 TCGAACTTTAACCGGCTGAACTTCGGTGGATTCTATACTGCTCTTCTTGAGAGAGGCGAC 2466 Query 2653 GAAATAGTTGCTTCAGCATCTATTAGATTTCATGGTAACCGTCTAGCTGAGATGCCGTTC 2712 |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 2467 GAAATAGTTGCTTCTGCATCTATTAGATTTCATGGTAACCATCTAGCTGAGATGCCGTTC 2526 Query 2713 ATTGGAACTCGGCATGTCTACAGACACCAAGGGATGTGCCGGCGGCTTTTCAGCGT-AGT 2771 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct 2527 ATTGGAACTCGGCATGTCTACAGACACCAAGGGATGTGCCGGCGGCTTTTCAGCGTCA-T 2585 Query 2772 TGAATCAG 2779 |||||||| Sbjct 2586 TGAATCAG 2593 Score = 555 bits (300), Expect = 1e-156 Identities = 387/430 (90%), Gaps = 2/430 (0%) Strand=Plus/Plus Query 2989 TGTGACCCATGCAATGAAGGCACTAATTCAGCGATCAAGACTAATGAAGTTTCCGTCTTG 3048 ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct 2599 TGTGACCCATGCAATGAAGGCACCAATTCTGCGATCAAGACTAATGAAGTTTCCGTCTTG 2658 Query 3049 GAGACCACATCACCGTCAAGAGATAAACCGGTATCAGATTATTTGGTCGAACACCAACCA 3108 |||||| |||| || ||| |||||||||| || |||||||| ||||||||||||||| Sbjct 2659 GAGACCGCATCTCCTTCAGGAGATAAACCAATACCAGATTATGTGGTCGAACACCAACTG 2718 Query 3109 TATGA-GGATGTAAGTTCTGCTTCCCGGGATAGTCTAGTCCACGATGGTTACCCCAAAAT 3167 | | | |||||||| ||| |||||||| ||||||| ||||||| |||| ||||||||||| Sbjct 2719 TTT-ACGGATGTAAATTCCGCTTCCCGAGATAGTCCAGTCCACAATGGATACCCCAAAAT 2777 Query 3168 GCTAGAGACTGCGTTCAAAACTTCAACCATGGCGAGATCATCAGATATGGAGAAGCACAT 3227 || |||||| | || ||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct 2778 GCAAGAGACCGAGTGCAAAATTTCAACCATGGCGAGATCATCAGATATGGAGGAGCACAT 2837 Query 3228 GGACTGCAAAACTTCCTATAGTCGATTTGATGGAGAAGATGAGGAAGATAGTTTAATTGA 3287 |||||||||| |||||| ||||| |||| |||||||||||| ||||||||||||||||| Sbjct 2838 GGACTGCAAATCTTCCTTTAGTCCTTTTGTTGGAGAAGATGAAGAAGATAGTTTAATTGA 2897 Query 3288 GTCTCCTCCTCAACGAAACAGCGACATGGCTTTCTTAGATCACATCATCCGCTCTCCGGT 3347 ||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||| Sbjct 2898 GTCTCCTCCTCAACGGAACAGCGACATGGCTTTCTTAGATCACATTATCCGTTCTCCGGT 2957 Query 3348 AGACACTGGTGCAACGGAAAACAGAGATGTCTATGGTTCAGGGGATGACGATTCTCCGGA 3407 |||||||||| || || |||| ||||||| ||||||||||||||||| ||||||||||| Sbjct 2958 AGACACTGGTAAAATGGCAAACGGAGATGTGTATGGTTCAGGGGATGATGATTCTCCGGA 3017 Query 3408 AACGCAATGA 3417 |||||||||| Sbjct 3018 AACGCAATGA 3027 Score = 481 bits (260), Expect = 2e-134 Identities = 298/315 (95%), Gaps = 8/315 (3%) Strand=Plus/Plus Query 287 GTTTTGTGGGGAATAGTAGAGAGTGGAAGGAGAGTAAGAGACATAGATTAgatgatgat- 345 ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct 242 GTTTTGTGGGGAAGAGTAGAGAGTGGAAGGAGAGTAAGAGGCATAGATTAGATGATGATG 301 Query 346 --gatga-ca--atgatgatgatgaggagagtgaagatgaattgatggcaatgaggatga 400 ||||| | |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 302 ACGATGATGATGATGATGATGATGAGGAGAGTGAAGATGAATTGTTGGCAATGAGGATGA 361 Query 401 ggaggtcgtttgatgGAAGTGGTGTTGATATTGGTAAGAAAGCTTATTTGGGGTCTGCTC 460 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 362 GGAGGTCGTTTGATGGCAGTGGTGTTGATATTGGTAAGAAAGCTTATTTGGGGTCTGCTC 421 Query 461 -ACTTTGCTAATGATAGGGAATATGGAACTGGTTCTAGTCGTAAAGGTTTAGATATTGAG 519 | |||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 422 GA-TTTGGTAATGGTAGGGAATATGGAACTGGTTCTAGTCGTAAAGATTTAGATATTGAG 480 Query 520 AAGAGAAGAAAACCGTATTTAGATGGATCAGGGAACATAGGTTTTGGTAATCAAGGTTAT 579 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 481 AAGAGAAGAAAACCGTATTTAGATGGATCAGGGAACATAGGTTTTGGTAATCAAGGTTAT 540 Query 580 AGAAACAGGTGTAAG 594 ||||||| ||||||| Sbjct 541 AGAAACATGTGTAAG 555 Score = 368 bits (199), Expect = 1e-100 Identities = 231/247 (94%), Gaps = 0/247 (0%) Strand=Plus/Plus Query 1 ATGGATAGAGGTGGGAGGAGATCTGGTGAATCTCCAGGGGTATTGATTAAGAAGAGAAGT 60 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1 ATGGATAGAGGTGGGAGGAGATCTGGTGAATCTCCAGGGGTATTGATAAAGAAGAGAAGT 60 Query 61 TCTTCTGGTTGCTTAATTGTGAAGAAGAACGATGGTGTTGGTAGGATTTGTTCGTTTTCA 120 || ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct 61 TCCTCTGGTTGCTTGATTGTGAAGAAGAACGATGGTGTTGGTAGAATTTGTTCGTTTTCT 120 Query 121 GAGAGTCGTCCGAATTGGGAGTCCAATAAGAGGTCTAGGATGATTACGAGTGACTCTGAG 180 |||| |||||||||||||||||||||||||||||||| ||||||| |||||| |||||| Sbjct 121 GAGAATCGTCCGAATTGGGAGTCCAATAAGAGGTCTACGATGATTTTGAGTGATTCTGAG 180 Query 181 TCTAGCGATAGATTTACCATCCCTCGAAATATGCGCCAGTATCGTAATGTAGAAGAGAGT 240 |||||||||| |||| | ||||||| ||||||||| || ||||||||||||||||||||| Sbjct 181 TCTAGCGATAAATTTGCAATCCCTCAAAATATGCGACACTATCGTAATGTAGAAGAGAGT 240 Query 241 CGTTTTG 247 ||||||| Sbjct 241 CGTTTTG 247 Score = 206 bits (111), Expect = 1e-51 Identities = 119/123 (97%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 2141 TACGGATGTTTCCTCTTGGTGATTGGCATTGCCCCAATTGTACATGCAAATTCTGTAAGG 2200 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 2044 TACAGATGTTTCCTCTTGGTGATTGGCATTGCCCCAATTGTACATGCAAATTCTGTAGGG 2103 Query 2201 CAGTTATTGAAGATGTTACTCAGACTGTGGGTGCAAATACCTGCAAAATGTGTGAGAAAA 2260 ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| Sbjct 2104 CAGTTATTGAAGATGTTACTCAGACCGTGGATGCAAATACCTGCAAAATGTGTGAGAAAA 2163 Query 2261 AAT 2263 ||| Sbjct 2164 AAT 2166 > Ahg891063 jgi|Araly1|891063|Al_scaffold_0007_3049 Length=1053 Score = 407 bits (220), Expect = 3e-112 Identities = 280/309 (91%), Gaps = 4/309 (1%) Strand=Plus/Plus Query 2679 ATTTCATGGTAACCGTC-TAGCTGAGATGCCGTTCATTGGAACTCGGCATGTCTACAGAC 2737 ||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||| Sbjct 747 ATTTCATGGTAACCG-CTTAGCTGAGATGCAGTTCATTGGAACTCGGCATGTCTACAGAC 805 Query 2738 ACCAAGGGATGTGCCGGCGGCTTTTCAGCGTAGTTGAATCAGCTCTTCAACATCTCAAAG 2797 |||||||||||||||| |||||||||||||| ||||||||| |||||||| ||||||||| Sbjct 806 ACCAAGGGATGTGCCGCCGGCTTTTCAGCGTTGTTGAATCAACTCTTCAAAATCTCAAAG 865 Query 2798 TCAAATTACTAATTATCCCTGCAACTGCCGACTTTAGCCATGTTTGGATATCCAAATTCG 2857 | ||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct 866 TTGAATTACTTGTTATCCCTGCAACTGCTGACTTAAGCCATGTTTGGATATCCAAATTCG 925 Query 2858 GGTTTCGACAAGTCGAGGATTCTCTGAAGAAAGAAATGCGGTCCATGAATCTGCTAACCT 2917 ||||| | | |||||||||||||||||||||||| |||||||||||||||| ||| ||| Sbjct 926 GGTTTAAATATGTCGAGGATTCTCTGAAGAAAGAATTGCGGTCCATGAATCTACTAGCCT 985 Query 2918 TCCCTGGCATTGATGTGTTACAGAAAGAGCTGTTAGCACCACGACATACCGAGTCTGCTG 2977 | ||||| |||||||||||||||||||| ||| |||||||| ||||| || ||||||||| Sbjct 986 TTCCTGGTATTGATGTGTTACAGAAAGAACTGCTAGCACCAAGACATGCCAAGTCTGCTG 1045 Query 2978 -TCGACACA 2985 | |||||| Sbjct 1046 CT-GACACA 1053 Score = 106 bits (57), Expect = 1e-21 Identities = 74/82 (90%), Gaps = 2/82 (2%) Strand=Plus/Plus Query 2146 ATGTTTCCTCTTGGTGATTGGCATTGCCCCAATTGTACATGCAAATTCTGTAAGGCAGTT 2205 |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 430 ATGTTTCCTCATGGTGATTGGCATTGCCCCAATTGTACATGCAAATTCTGTAGGGCAGTT 489 Query 2206 ATTGAAGA-TGTTACTCAGACT 2226 | ||||| ||| | ||| ||| Sbjct 490 GTCGAAGAATGT-AGTCAAACT 510 > Ahg896218 jgi|Araly1|896218|Al_scaffold_0005_184 Length=1158 Score = 353 bits (191), Expect = 4e-96 Identities = 286/328 (87%), Gaps = 22/328 (7%) Strand=Plus/Plus Query 2679 ATTTCATGGTAACCGTC-TAGCTGAGATGCCGTTCATTGGAACTCGGCATGTCTACAGAC 2737 ||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||| Sbjct 747 ATTTCATGGTAACCG-CTTAGCTGAGATGCAGTTCATTGGAACTCGGCATGTCTACAGAC 805 Query 2738 ACCAAGGGATGTGCCGGCGGCTTTTCAGCGTAGTTG----AA--TC-----A---G---- 2779 |||||||||||||||| |||||||||||||| |||| || || | | Sbjct 806 ACCAAGGGATGTGCCGCCGGCTTTTCAGCGTTGTTGAATCAATGTCTTTTGATGTGAAAA 865 Query 2780 CTCTTCAACATCTCAAAGTCAAATTACTAATTATCCCTGCAACTGCCGACTTTAGCCATG 2839 |||||||| |||||||||| ||||||| |||||||||||||||| ||||| ||||||| Sbjct 866 CTCTTCAAAATCTCAAAGTTGAATTACTTGTTATCCCTGCAACTGCTGACTTAAGCCATG 925 Query 2840 TTTGGATATCCAAATTCGGGTTTCGACAAGTCGAGGATTCTCTGAAGAAAGAAATGCGGT 2899 ||||||||||||||||||||||| | | |||||||||||||||||||||||| |||||| Sbjct 926 TTTGGATATCCAAATTCGGGTTTAAATATGTCGAGGATTCTCTGAAGAAAGAATTGCGGT 985 Query 2900 CCATGAATCTGCTAACCTTCCCTGGCATTGATGTGTTACAGAAAGAGCTGTTAGCACCAC 2959 |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 986 CCATGAATCTACTAGCCTTCCCTGGCATTGATGTGTTACAGAAAGAGCTGTTAGCACCAA 1045 Query 2960 GACATACCGAGTCTGCTG-TCGACACAG 2986 ||||| || ||||||||| | ||||||| Sbjct 1046 GACATGCCAAGTCTGCTGCT-GACACAG 1072 Score = 139 bits (75), Expect = 1e-31 Identities = 87/93 (94%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 2145 GATGTTTCCTCTTGGTGATTGGCATTGCCCCAATTGTACATGCAAATTCTGTAAGGCAGT 2204 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 411 GATGTTTCCTCATGGTGATTGGCATTGCCCCAATTGTACATGCAAATTCTGTAGGGCAGT 470 Query 2205 TATTGAAGATGTTACTCAGACTGTGGGTGCAAA 2237 | | |||||||||| ||| |||||||||||||| Sbjct 471 TGTCGAAGATGTTAGTCAAACTGTGGGTGCAAA 503 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 133353735792 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5