BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT4G15490.1 Length=1848 Score E Sequences producing significant alignments: (Bits) Value Ahg493341 jgi|Araly1|493341|fgenesh2_kg.7__2774__AT4G15490.1 2553 0.0 Ahg493340 jgi|Araly1|493340|fgenesh2_kg.7__2773__AT4G15500.1 1245 0.0 Ahg946766 jgi|Araly1|946766|scaffold_702995.1 1075 0.0 > Ahg493341 jgi|Araly1|493341|fgenesh2_kg.7__2774__AT4G15490.1 Length=1730 Score = 2553 bits (1382), Expect = 0.0 Identities = 1588/1689 (94%), Gaps = 8/1689 (0%) Strand=Plus/Plus Query 72 AGAGATCGTCCAAGATTCGACGAAGA-GTAAAAGACAAAGAAGAAGAGAAGTGTATGTTT 130 |||||||||||||||||||||||||| |||| |||||||||||||||||||||||| || Sbjct 45 AGAGATCGTCCAAGATTCGACGAAGAGGTAAGAGACAAAGAAGAAGAGAAGTGTATCATT 104 Query 131 TTGCCACTCGTTTTGTTACTTTCTTTTGATATTTTGTTTTAGGTGTTCACATAAATTTGA 190 ||||||||||||||| |||||||||||| |||||| |||||||||||||||||||||||| Sbjct 105 TTGCCACTCGTTTTGCTACTTTCTTTTGTTATTTTCTTTTAGGTGTTCACATAAATTTGA 164 Query 191 TAGTGTAAAGAAAACAAAACCACTTTCTAG-TT-CTTAAAGAAACTAGAAATCCATGGAC 248 |||||||||||||| ||||||| ||||||| || ||||||||||||||||| ||||||| Sbjct 165 TAGTGTAAAGAAAATAAAACCAGTTTCTAGTTTACTTAAAGAAACTAGAAA-CCATGGAA 223 Query 249 CCGTCTCGTCATACTCATGTGATGCTCGTATCTTTCCCCGGCCAAGGTCACGTAAACCCT 308 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 224 CCGTCTCGTCATACTCATGTGATGCTCGTATCTTTCCCAGGCCAAGGTCACGTAAACCCT 283 Query 309 CTACTTCGTCTCGGAAAGCTCATAGCCTCTAAAGGCTTACTCGTCACCTTTGTCACCACA 368 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 284 CTTCTTCGTCTCGGAAAGCTCATAGCCTCTAAAGGCTTACTCGTCACCTTTGTCACCACA 343 Query 369 GAGAAGCCATGGGGCAAGAAGATGCGTCAAGCCAACAAGATTCAAGACGGTGTGCTCAAA 428 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 344 GAGCAGCCATGGGGCAAGAAGATGCGTCAAGCCAACAAGATTCAAGACGGTGTGCTCAAA 403 Query 429 CCGGTCGGTCTAGGTTTCATCCGGTTTGAGTTCTTCTCTGACGGCTTCGCCGACGACGAT 488 |||||||||||||||||| ||||||| ||||||||||||||||| || || |||||||| Sbjct 404 CCGGTCGGTCTAGGTTTCCTCCGGTTCGAGTTCTTCTCTGACGGTTTAGCTGACGACGAC 463 Query 489 GAAAAAAGATTCGACTTCGATGCCTTCCGACCACACCTTGAAGCTGTCGGAAAACAAGAG 548 |||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||| Sbjct 464 GAAAAAAGATTCGACTTCAATACCTTCCGACCACACCTTGAAGCTGTAGGAAAACAAGAG 523 Query 549 ATCAAGAATCTCGTTAAGAGATATAACAAGGAGCCGGTGACGTGTCTCATAAACAACGCT 608 |||||||||||||||||| ||||||||||||| |||||||||||||| |||||||| ||| Sbjct 524 ATCAAGAATCTCGTTAAGCGATATAACAAGGAACCGGTGACGTGTCTTATAAACAATGCT 583 Query 609 TTTGTCCCATGGGTATGTGATGTCGCCGAGGAGCTTCACATCCCTTCGGCTGTTCTATGG 668 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 584 TTTGTCCCATGGGTATGTGATGTGGCCGAGGAGCTTCACATCCCTTCGGCTGTTCTATGG 643 Query 669 GTCCAGTCTTGTGCTTGTCTCACGGCTTATTACTATTACCACCACCGGTTAGTTAAGTTC 728 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 644 GTCCAGTCTTGCGCTTGTCTCACGGCTTATTACTATTACCACCACCGGTTAGTTAAGTTT 703 Query 729 CCGACCAAAACCGAGCCGGACATCAGCGTTGAAATCCCTTGCTTGCCATTGTTAAAGCAT 788 |||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct 704 CCGACCGAAACCGAGCCGGACATTAACGTTGAAATCCCTTGCTTGCCATTGTTAAAGCAT 763 Query 789 GACGAGATCCCAAGCTTTCTTCACCCTTCGTCTCCGTATACAGCTTTTGGAGATA-TCAT 847 ||||||||||||||||||||||||||||||||||| | ||||||||||||||| | |||| Sbjct 764 GACGAGATCCCAAGCTTTCTTCACCCTTCGTCTCCCTTTACAGCTTTTGGAGA-AGTCAT 822 Query 848 TTTAGACCAGTTAAAGAGATTCGAAAACCACAAGTCTTTCTATCTTTTCATCGACACTTT 907 |||||||||||| ||| || |||||||| ||||| |||| ||| |||||||||||||||| Sbjct 823 TTTAGACCAGTTCAAGCGAATCGAAAACGACAAGCCTTTTTATATTTTCATCGACACTTT 882 Query 908 TCGCGAACTAGAAAAAGACATCATGGACCACATGTCACAACTTTGTCCTCAAGCCATCAT 967 |||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||| Sbjct 883 TCGCGAACTAGAAAAAGACATCATCGACCACATGTCACAGCTTTCTCCTCAAGCCATCAT 942 Query 968 CAGTCCTGTCGGTCCGCTCTTCAAGATGGCTCAAACCTTGAGTTCTGACGTTAAGGGAGA 1027 |||||||||||||||||| |||||||||||||||||| |||| || |||||||||||||| Sbjct 943 CAGTCCTGTCGGTCCGCTTTTCAAGATGGCTCAAACCATGAGCTCCGACGTTAAGGGAGA 1002 Query 1028 TATATCCGAGCCAGCGAGTGACTGCATGGAATGGCTTGACTCAAGAGAACCATCCTCAGT 1087 ||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1003 TATCTCTGAGCCAGCGAGTGACTGCATGGAGTGGCTTGACTCAAGAGAACCATCCTCAGT 1062 Query 1088 CGTTTACATCTCCTTTGGGACTATAGCCAACTTGAAGCAAGAGCAGATGGAGGAGATCGC 1147 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1063 CGTTTACATCTCCTTTGGGACTATAGCCAACGTGAAGCAAGAGCAGATGGAGGAGATCGC 1122 Query 1148 TCATGGCGTTTTGAGCTCTGGCTTGTCGGTCTTATGGGTGGTTCGGCCTCCCATGGAAGG 1207 |||||||||||||||||||||||||||| |||| ||||| |||||||| |||||||| || Sbjct 1123 TCATGGCGTTTTGAGCTCTGGCTTGTCGTTCTTGTGGGTTGTTCGGCCACCCATGGAGGG 1182 Query 1208 GACATTTGTAGAACCACATGTTTTGCCTCGAGAGCTCGAAGAAAAGGGTAAAATCGTGGA 1267 | || ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct 1183 GTCACTTGTAGAACCACATGTTTTGCCTCGCGAGATCGAAGAAAAGGGTAAAATCGTGGA 1242 Query 1268 ATGGTGTCCCCAAGAGAGAGTCTTGGCTCATCCTGCGATTGCTTGTTTCTTAAGTCACTG 1327 ||||||||| |||||||||||||||| ||||||||| ||||||||||| ||||||||||| Sbjct 1243 ATGGTGTCCACAAGAGAGAGTCTTGGTTCATCCTGCAATTGCTTGTTTTTTAAGTCACTG 1302 Query 1328 CGGATGGAACTCGACAATGGAGGCTTTAACTGCC-GGAGTCCCCGTTGTTTGTTTTCCGC 1386 |||||||||||||||||||||||||||||| | | || |||||||||||||||||||||| Sbjct 1303 CGGATGGAACTCGACAATGGAGGCTTTAAC-GTCTGGTGTCCCCGTTGTTTGTTTTCCGC 1361 Query 1387 AATGGGGAGATCAAGTGACTGATGCGGTGTACTTGGCTGATGTTTTCAAGACAGGAGTGA 1446 ||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||| Sbjct 1362 AATGGGGAGATCAAGTGACGGATGCGGTTTACTTGGTTGATGTTTTCAAGACAGGAGTGA 1421 Query 1447 GACTAGGCCGCGGAGCCGCTGAGGAGATGATTGTTTCGAGGGAGGTTGTAGCAGAGAAGC 1506 ||||||||||||||| ||||| ||| ||||||||||||||| || || | ||||||| Sbjct 1422 GACTAGGCCGCGGAGAAGCTGAAAAGAAGATTGTTTCGAGGGAAGTAGTGGTGGAGAAGC 1481 Query 1507 TGCTTGAGGCCACAGTTGGGGAAAAGGCGGTGGAGCTGAGAGAAAACGCTCGGAGGTGGA 1566 ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1482 TGCTTGAGGCCACGGTTGGGGAAAAGGCGGTGGAGCTAAGAGAAAACGCTCGGAGGTGGA 1541 Query 1567 AGGCGGAGGCCGAGGCCGCCGTGGCGGACGGTGGATCATCTGATATGAACTTTAAAGAGT 1626 ||||||| || |||||||| ||||||||||||||||||||||||| |||||||||||||| Sbjct 1542 AGGCGGAAGCGGAGGCCGCGGTGGCGGACGGTGGATCATCTGATAGGAACTTTAAAGAGT 1601 Query 1627 TTGTGGACAAGTTGGTTACGAAACATGTGACGAGAGAAGACAACGGAGAACACTAGTGAT 1686 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1602 TTGTGGACAAGTTGGTTACGAAACATGTGACGAGAGAAGACAACGGAGACCACTAGTGAT 1661 Query 1687 AATGATGTCTCGAAAATATCCGACTATTTGTTGTACCGCAAAAACCTTAACCACTACAAC 1746 |||||||||||| |||||||||| | |||||| |||| |||||||||||||||| ||||| Sbjct 1662 AATGATGTCTCGTAAATATCCGAATGTTTGTTTTACCTCAAAAACCTTAACCACCACAAC 1721 Query 1747 Cttttcttt 1755 |||||||| Sbjct 1722 TTTTTCTTT 1730 > Ahg493340 jgi|Araly1|493340|fgenesh2_kg.7__2773__AT4G15500.1 Length=1428 Score = 1245 bits (674), Expect = 0.0 Identities = 1171/1407 (83%), Gaps = 50/1407 (4%) Strand=Plus/Plus Query 254 TCGTCATACTCATGTGATGCTCGTATCTTTCCCCGGCCAAGGTCACGTAAACCCTCTACT 313 |||| | |||||||||||||||||||| ||||| ||||||||||||||||||||||| || Sbjct 16 TCGTTA-ACTCATGTGATGCTCGTATCATTCCCAGGCCAAGGTCACGTAAACCCTCTTCT 74 Query 314 TCGTCTCGGAAAGCTCATAGCCTCTAAAGGCTTACTCGTCACCTTTGTCACCACAGAGAA 373 |||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||| | Sbjct 75 TCGTCTCGGAAAACTCATAGCCTCTAAAGGTTTAATCGTCACCTTTGTCACCACAGAGGA 134 Query 374 GCCATGGGGCAAGAAGATGCGTCAAGCCAACAAGATTCAAGACGGTGTGCTCAAACCGGT 433 ||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct 135 GCCATTAGGCAAGAAGATGCGTCAAGCAAATAAGATTCAAGACGGTGTGCTCAAACCGGT 194 Query 434 CGGTCTAGGTTTCATCCGGTTTGAGTTCTTCTCTGACGGCTTCGCCGACGACGATGAAAA 493 ||||||||||||| ||||||| || |||||| || || || | | || | | | | Sbjct 195 CGGTCTAGGTTTCCTCCGGTTCGAATTCTTCGAAGATGGATTTGTCTAC-A--AAG-ACG 250 Query 494 AAGATTCGACTTCGATGCCTTCCGACCA-CACCTTGAAGCTGT-CGGAAAACAAGAGATC 551 | || || || || |||| | | || ||||||| | | |||||||| ||||||| Sbjct 251 CCG-TT-GA-TT---TG--TTCCTAAAATCA-CTTGAAG-TTTCCGGAAAACGAGAGATC 300 Query 552 AAGAATCTCGTTAAGAGATAT-AACAAGGAGCCGGTGACGTGTCTCATAAACAACGCTTT 610 |||||||| || |||| |||| | | || | || |||| ||||||||||||||||||||| Sbjct 301 AAGAATCTTGTCAAGAAATATGAGC-AGCAACCAGTGAAGTGTCTCATAAACAACGCTTT 359 Query 611 TGTCCCATGGGTATGTGATGTCGCCGAGGAGCTTCACATCCCTTCGGCTGTTCTATGGGT 670 |||||||||||| ||||| || |||||||||||||| ||||| || |||||||| ||||| Sbjct 360 TGTCCCATGGGTGTGTGACGTAGCCGAGGAGCTTCAAATCCCATCAGCTGTTCTTTGGGT 419 Query 671 CCAGTCTTGTGCTTGTCTCACGGCTTATTACTATTACCACCACCGGTTAGTTAAGTTCCC 730 ||||||||||||||| ||| | |||||||||||||||||||||| |||||||||||| || Sbjct 420 CCAGTCTTGTGCTTGCCTCGCCGCTTATTACTATTACCACCACCAGTTAGTTAAGTTTCC 479 Query 731 GACCA-AAACCGAGCCGGACATCAGC-GTTGAAATCCCTTGCTTGCCATT-GT--TAAAG 785 || || |||| |||||||| |||| | ||||| |||||| | |||||| || | ||| Sbjct 480 GA-CAGAAACTGAGCCGGAGATCA-CAGTTGACTTCCCTTTCAAGCCATTAGTGATGAAG 537 Query 786 CATGACGAGATCCCAAGCTTTCTTCACCCTTCGTCTCCGTATACAGCTTTTGGAGATATC 845 |||||||||||||| ||||||||||||||||| ||||||| | | || | |||| |||| Sbjct 538 CATGACGAGATCCCTAGCTTTCTTCACCCTTCCTCTCCGTTTTCCTCTGTGGGAGGTATC 597 Query 846 ATTTTAGACCAGTTAAAGAGATTCGAAAACCACAAGTCTTTCTATCTTTTCATCGACACT 905 |||||||| ||| | | || || | |||||| |||||| | || ||||||||||| Sbjct 598 ATTTTAGAACAGAT-CA-AG---CG-ACTTCACAAGCCTTTCTTTGTTCTCATCGACACT 651 Query 906 TTTCGCGAACTAGAAAAAGACATCATGGACCACATGTCACAACTTTGTCCTCAAGCCATC 965 |||| || || |||||||| | ||| ||||| ||||| || || || ||||| | |||| Sbjct 652 TTTCAAGAGCTGGAAAAAGATACCATTGACCATATGTCCCAGCTCTGCCCTCATGTCATC 711 Query 966 ATCAGTCCTGTCGGTCCGCTCTTCAAGATGGCTCAAACCTTGAGTTCTGACGTTAAGGGA 1025 | | ||| |||||||||| || | ||||||| ||||| | || ||||| |||||||| Sbjct 712 CTTAACCCTATCGGTCCGCTTTTTACGATGGCTAAAACCATAAGCTCTGATATTAAGGGA 771 Query 1026 GATATATCCGAGCCAGCGAGTGACTGCATGGAATGGCTTGACTCAAGAGAACCATCCTCA 1085 ||||| ||||||||||||||||||||||| || ||||||||||| |||||||||||||| Sbjct 772 GATATCTCCGAGCCAGCGAGTGACTGCATAGAGTGGCTTGACTCGAGAGAACCATCCTCT 831 Query 1086 GTCGTTTACATCTCCTTTGGGACTATAGCCAACTTGAAGCAAGAGCAGATGGAGGAGATC 1145 || |||||| |||| ||||||||||| | ||||||||||||||||||| || ||||| Sbjct 832 GTTGTTTACGTCTCTTTTGGGACTATGGTTTACTTGAAGCAAGAGCAGATCGATGAGATT 891 Query 1146 GCTCATGGCGTTTTGAGCTCTGGCTTGT-CGGTCTTATGGGTGGTTCGGCCTCCCATGGA 1204 ||||||||| || | | ||| || |||| | | ||||||||| |||||||||||| | | Sbjct 892 GCTCATGGCATTCTCAACTCCGGGTTGTCCTG-CTTATGGGTTGTTCGGCCTCCCTTACA 950 Query 1205 AGGGACATTTG---TAGAACCACATGTTTTGCCTCGAGAGCTCGAAGA-AAAGGGTAAA- 1259 |||| |||| ||||||||| || ||||||| |||||| ||||| ||| || ||| Sbjct 951 AGGG---TTTGACCAAGAACCACAAGTCTTGCCTCTAGAGCTTGAAGAGAAA-GG-AAAG 1005 Query 1260 ATCGTGGAATGGTGTCCCCAAGAGAGAGTCTTGGCTCATCCTGCGATTGCTTGTTTCTTA 1319 ||||| ||||||||||| ||||||| ||| ||||| ||||||||| ||||||| |||||| Sbjct 1006 ATCGTAGAATGGTGTCCACAAGAGAAAGTGTTGGCCCATCCTGCGGTTGCTTGCTTCTTA 1065 Query 1320 AGTCACTGCGGATGGAACTCGACAATGGAGGCTTTAACTGCCGGAGTCCCCGTTG-TTTG 1378 |||||||||||||||||||| || |||||||| |||||| | ||||| |||| || |||| Sbjct 1066 AGTCACTGCGGATGGAACTCAACCATGGAGGCATTAACTTCAGGAGTTCCCG-TGATTTG 1124 Query 1379 TTTTCCGCAATGGGGAGATCAAGTGACTGATGCGGTGTACTTGGCTGATGTTTTCAAGAC 1438 ||| ||||| ||||||||||| ||||| ||||||||||| || ||||||||||||||| Sbjct 1125 TTTCCCGCAGTGGGGAGATCAGGTGACAAATGCGGTGTACATGATTGATGTTTTCAAGAC 1184 Query 1439 AGGAGTGAGAC-TAGGCCGCGGAGCCGCTGAGGAGATGATTGTTTCGAGGGAGGTTGTAG 1497 |||| |||||| || ||||||||| |||||| ||| ||||||| ||||||||| || | Sbjct 1185 AGGAATGAGACTTA-GCCGCGGAGAGGCTGAGAAGAGGATTGTTCCGAGGGAGGAGGTTG 1243 Query 1498 CAGAGAAG-CTGCTTGAGGCCACAGTTGGGGAAAAGGCGGTGGAGCTGAGAGAAAACGCT 1556 | ||| | ||||||||| |||| ||||| || ||||||| ||||||||||||||||||| Sbjct 1244 CTGAG-CGACTGCTTGAGTCCACCGTTGGAGAGAAGGCGGCGGAGCTGAGAGAAAACGCT 1302 Query 1557 CGGAGGTGGAAGGCGGAGGCCGAGGCCGCCGTGGCGGACGGTGGATCATCTGATATGAAC 1616 ||||||||||||| |||||| ||| | ||||| ||| |||||||||||||||| | |||| Sbjct 1303 CGGAGGTGGAAGGAGGAGGCGGAGACTGCCGTAGCGTACGGTGGATCATCTGAGAGGAAC 1362 Query 1617 TTTAAAGAGTTTGTGGACAAGTTGGTT 1643 ||| |||||||||| |||||||||||| Sbjct 1363 TTTCAAGAGTTTGTTGACAAGTTGGTT 1389 > Ahg946766 jgi|Araly1|946766|scaffold_702995.1 Length=1177 Score = 1075 bits (582), Expect = 0.0 Identities = 749/831 (90%), Gaps = 6/831 (1%) Strand=Plus/Plus Query 223 CTTAAAGAAACTAGAAATCCATGGACCCGTCTCGTCATACTCATGTGATGCTCGTATCTT 282 |||| ||||| |||||||||||||| ||||||| | | ||||||| ||||||||||||| Sbjct 1 CTTATAGAAAATAGAAATCCATGGAACCGTCTCCACTTCCTCATGTAATGCTCGTATCTT 60 Query 283 TCCCCGGCCAAGGTCACGTAAACCCTCTACTTCGTCTCGGAAAGCTCATAGCCTCTAAAG 342 ||| |||||||||||| ||| |||||| ||||||||||||| ||| ||||||||||||| Sbjct 61 ACCCAGGCCAAGGTCACATAAGCCCTCTTCTTCGTCTCGGAACGCTTATAGCCTCTAAAG 120 Query 343 GCTTACTCGTCACCTTTGTCACCACAGAGAAGCCATGGGGCAAGAAGATGCGTCAAGCCA 402 ||||| ||||||||||||| ||||||||| ||||||||||||| |||||||||||||||| Sbjct 121 GCTTAATCGTCACCTTTGTTACCACAGAGCAGCCATGGGGCAAAAAGATGCGTCAAGCCA 180 Query 403 ACAAGATTCAAGACGGTGTGCTCAAACCGGTCGGTCTAGGTTTCATCCGGTTTGAGTTCT 462 ||||||||||||| || ||||||||||| ||||||||||||||| ||||||| ||||||| Sbjct 181 ACAAGATTCAAGAAGGCGTGCTCAAACCCGTCGGTCTAGGTTTCCTCCGGTTCGAGTTCT 240 Query 463 TCTCTGACGGCTTCGCCGACGACGATGAAAAAAGATTCGACTTCGATGCCTTCCGACCAC 522 ||||||||||||| | || ||||| ||||||||| ||||||| |||||||||||||| Sbjct 241 TCTCTGACGGCTTAACTGATGACGACGAAAAAAGAACCGACTTCAATGCCTTCCGACCAA 300 Query 523 ACCTTGAAGCTGTCGGAAAACAAGAGATCAAGAATCTCGTTAAGAGATATAACAAGGAGC 582 || |||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 301 ACATTGAAGCTGTCGGAAAACAAGAGATCAAAAATCTCGTTAAGAGATATAACAAGGAAT 360 Query 583 CGGTGACGTGTCTCATAAACAACGCTTTTGTCCCATGGGTATGTGATGTCGCCGAGGAGC 642 ||||||| ||||| ||||||||||||| ||| || ||||||||||| || |||||||||| Sbjct 361 CGGTGACATGTCTTATAAACAACGCTTATGTGCCGTGGGTATGTGACGTGGCCGAGGAGC 420 Query 643 TTCACATCCCTTCGGCTGTTCTATGGGTCCAGTCTTGTGCTTGTCTCACGGCTTATTACT 702 |||| || ||||| ||||||||||||||||||||||| ||||||||| | |||||||| | Sbjct 421 TTCAAATTCCTTCTGCTGTTCTATGGGTCCAGTCTTGCGCTTGTCTCTCTGCTTATTATT 480 Query 703 ATTACCACCACCGGTTAGTTAAGTTCCCGACCAAAACCGAGCCGGACATC-AGCGTTGAA 761 ||||||||||| ||||||||||||| |||||||||||||||||||||||| | ||||||| Sbjct 481 ATTACCACCACGGGTTAGTTAAGTTTCCGACCAAAACCGAGCCGGACATCGA-CGTTGAA 539 Query 762 ATCCCTTGCTTGCCATTGTTAAAGCATGACGAGATCCCAAGCTTTCTTCACCCTTCGTCT 821 ||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||| Sbjct 540 ATCCCTTGCTTGCCATTATTAAAGCATGACGAGATCCCAAGTTTTCTTCACACTTCGTCT 599 Query 822 CCGTATACAGCTTTTGGAGATA-TCATTTTAGACCAGTTAAAGAGATTCGAAAACCACAA 880 || |||||| ||| ||||| | ||||||||||||| || ||| || |||||||| |||| Sbjct 600 CCTTATACACCTTACGGAGA-AGTCATTTTAGACCAATTCAAGCGACTCGAAAACGACAA 658 Query 881 GTCTTTCTATCTTTTCATCGACACTTTTCGCGAACTAGAAAAAGACATCATGGACCACAT 940 | ||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||| Sbjct 659 GCCTTTCTATCTTTTCATCGACACTTTCCGCGAACTAGAAAAAGATATCATCGACCACAT 718 Query 941 GTCACAAC-TTTGTCCTCAAGCCATCATCAGTCCTGTCGGTCCGCTCTTCAAGATGGCTC 999 |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 719 GTCA-AACCTTTGTCCTCAAGCCATCATCAGCCCTGTCGGTCCGCTCTTCAAGATGGCTG 777 Query 1000 AAACCTTGAGTTCTGACGTTAAGGGAGATATATCCGAGCCAGCGAGTGACT 1050 ||||| | || ||||||||||| |||||||| ||||||||||||||||||| Sbjct 778 AAACCATAAGCTCTGACGTTAAAGGAGATATCTCCGAGCCAGCGAGTGACT 828 Score = 549 bits (297), Expect = 3e-155 Identities = 331/348 (95%), Gaps = 0/348 (0%) Strand=Plus/Plus Query 1114 CCAACTTGAAGCAAGAGCAGATGGAGGAGATCGCTCATGGCGTTTTGAGCTCTGGCTTGT 1173 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 829 CCAACTTGAAGCAAGAGCAGATGGAGGAGATCGCTCATGGCGTTTTGAGCTCTGGCTTGT 888 Query 1174 CGGTCTTATGGGTGGTTCGGCCTCCCATGGAAGGGACATTTGTAGAACCACATGTTTTGC 1233 || |||||||||| ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct 889 CGTTCTTATGGGTAGTTCGGCCTCCCATGGAAGGGTCACTTGTAGAACCACATGTTTTGC 948 Query 1234 CTCGAGAGCTCGAAGAAAAGGGTAAAATCGTGGAATGGTGTCCCCAAGAGAGAGTCTTGG 1293 |||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||| Sbjct 949 CTCGAGAGCTCGAAGAGATGGGTAAAATCGTGGAATGGTGTCCCCAAGAGAGAGTGTTGG 1008 Query 1294 CTCATCCTGCGATTGCTTGTTTCTTAAGTCACTGCGGATGGAACTCGACAATGGAGGCTT 1353 |||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct 1009 CTCATCCTGCAATTGCTTGCTTCTTAAGCCACTGCGGATGGAACTCGACAATGGAGGCTT 1068 Query 1354 TAACTGCCGGAGTCCCCGTTGTTTGTTTTCCGCAATGGGGAGATCAAGTGACTGATGCGG 1413 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct 1069 TAACTTCCGGAGTCCCTGTTGTTTGTTTTCCGCAATGGGGAGATCAAGTGACTGATGATG 1128 Query 1414 TGTACTTGGCTGATGTTTTCAAGACAGGAGTGAGACTAGGCCGCGGAG 1461 ||||||||| ||||||||||||| || ||||||||||||||||||||| Sbjct 1129 TGTACTTGGTTGATGTTTTCAAGCCATGAGTGAGACTAGGCCGCGGAG 1176 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 69400426390 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5