BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT4G15730.1 Length=3952 Score E Sequences producing significant alignments: (Bits) Value Ahg493314 jgi|Araly1|493314|fgenesh2_kg.7__2747__AT4G15730.1 2739 0.0 > Ahg493314 jgi|Araly1|493314|fgenesh2_kg.7__2747__AT4G15730.1 Length=3814 Score = 2739 bits (1483), Expect = 0.0 Identities = 1752/1879 (93%), Gaps = 30/1879 (2%) Strand=Plus/Plus Query 2048 AAAAACATGAAGCTGCCAGGAGAAACACCTACTGCTACTCAGATATCTGCAGACC----T 2103 |||||||||||||||||||||||||||| || ||||||||||| || |||||| | Sbjct 1939 AAAAACATGAAGCTGCCAGGAGAAACACTTAAGGCTACTCAGATGTCCACAGACCTTGGT 1998 Query 2104 -T-TCGCACGAtttttttCAGGATAAGATTGACCAGAAAGCAAAGAGGAGAGCAGCAGGT 2161 | |||||||||||| ||||||||||||||||||||||||||||| || ||||||||||| Sbjct 1999 GTGTCGCACGATTTTGTTCAGGATAAGATTGACCAGAAAGCAAAGTGGCGAGCAGCAGGT 2058 Query 2162 GCTGGTTGTCAGATAAAGGTCAAGAAGAAAAAGGAGGCTGACAAAGAAGAAAGTGATGGT 2221 ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| Sbjct 2059 ACTGGTTGTCAGATAAAGATCAAGAAGAAAAAGGAGGCTGACAAAAAAGAAAGTGATGGT 2118 Query 2222 TCCAAGCATATCAAGACTGGTGATGGTAACAAACTTGCCAGAGTTATTAAAGCAGAAGAA 2281 |||||||||||||||||||||||||||| |||||| ||||||| | |||||||||||||| Sbjct 2119 TCCAAGCATATCAAGACTGGTGATGGTACCAAACTCGCCAGAGGTGTTAAAGCAGAAGAA 2178 Query 2282 ATACATTGGAATCAAGATCCTAAATGGACTCCAGCAGAGAGAAAAAGAAAACGTCATGAC 2341 |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct 2179 ATACATTGGAATCAAGATCCGGAATGGACTCCAGCAGAGAGAAAAACAAAACGTCATGAC 2238 Query 2342 AATGATTTTTGCACTTTGAATGTAGAGCGAGACCCAAAGAAAAGATTACTCGTATCTAAA 2401 |||||||||| ||||||| |||||||||||||| |||||||||||||||||| ||||||| Sbjct 2239 AATGATTTTTACACTTTGGATGTAGAGCGAGACACAAAGAAAAGATTACTCGCATCTAAA 2298 Query 2402 AAGAAACCTGACCACAAACCTCAACTGATAACTGCTAGTGGTTCCTTGTGTACAAAAGCC 2461 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | Sbjct 2299 AAGAAACCTGACCACAAACCTCAACTGACAACTGCTAGTGGTTCCTTGTGTACAAAATCT 2358 Query 2462 CAGGGAAATATCAATAGTACTGTGAGGAAAATAAGGTTGATGGGTTACAAGCAGGGTAAG 2521 || ||||||||||||| | || ||||||||||||||||||||||| |||||||||||||| Sbjct 2359 CATGGAAATATCAATAATCCTATGAGGAAAATAAGGTTGATGGGTAACAAGCAGGGTAAG 2418 Query 2522 GATGGGAAAAATTCAAAATTGTTTGCAGATGGTGAGGAAAACGAGCCCTCAATGGAAAAG 2581 |||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||| | Sbjct 2419 GATGGGAACAATTCAAAATTGTTTGCGGATGGTGAGGAAAAAGAGCCCTCAATGGAAATG 2478 Query 2582 GCGGTAACAACTAAGATTTCAGTCCATGAATCTAAAGCAAACCAAAGAAATGAATTGTTT 2641 |||||||||||||||||| ||||||| |||||||||||| |||||| ||||||||||||| Sbjct 2479 GCGGTAACAACTAAGATTACAGTCCAGGAATCTAAAGCACACCAAAAAAATGAATTGTTT 2538 Query 2642 CAGGCTGA---T--T-GCTTTCAAGAACACCT-GAATGGTGATGCCTCATGTAGATATTT 2694 |||||||| | | ||| ||||||| || ||||| |||||||||||||||||| || Sbjct 2539 CAGGCTGATGGTGATGGCTCTCAAGAA-TTCTGGAATGCTGATGCCTCATGTAGATACTT 2597 Query 2695 CTCTGGTGGAAGTGGGCAGATTTCTGGGATAGAAACATCAAACTCGTCGAAGGTTTTAGG 2754 |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| Sbjct 2598 CTCTGGTGGAAGTGGGCAGATTTCTGGGGTAGAAACATCAAGCTCGTCGAAGGTTTTAGG 2657 Query 2755 ATCACATAAAAGTGGACGAATGTATGTGGAAGAAGTAAAAGCATCCCCTGTGGAATCAGT 2814 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 2658 ATCACATAAAAGTGGAAGAATGTATGTGGAAGAAGTAAAAGCATCCCCTGTGGAATCAGT 2717 Query 2815 TTCCTCTTCCCCTGCAAGGTCTTCATG-CCC-C--A--------CGAATGATATACTTCA 2862 ||||||||||||||||||||||||||| ||| | | |||||||||||||||| Sbjct 2718 TTCCTCTTCCCCTGCAAGGTCTTCATGCCCCACAAATCTTGCTGCGAATGATATACTTCA 2777 Query 2863 AGAGGCTGAAAAGCTGAGAAAGCTTGCTGACTGTTTCAAGAGCTCTGGATTTGAATATGA 2922 ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| | Sbjct 2778 AGAGGCTGAAAAGCTGAGAAAGCGTGCTGACTGTTTCAAGAGCTCTGGATCTGAATATCA 2837 Query 2923 ATACAAGGAGATCAACTTTAAAGCGGCTCTGAGGTTTCTCCTTGGAGCTTCAGTTTTAGA 2982 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2838 ATACAAGGAGACCATCTTTAAAGCGGCTCTGAGGTTTCTCCTTGGAGCTTCAGTTTTAGA 2897 Query 2983 AATGTGCAGTACAGATAATGTGGAAGTGGGGAAGATGAGCCATATTGAGGCTTACCATAC 3042 |||| ||||||| |||| |||||||| ||||||||||||||||||||||||||||||| | Sbjct 2898 AATGAGCAGTACTGATAGTGTGGAAGGGGGGAAGATGAGCCATATTGAGGCTTACCATTC 2957 Query 3043 TGCTGCAAAACTTTCAGAAAGTTGTGCCCATCAATATGAAACAAGCCAAGAAATGGCTGC 3102 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 2958 TGCTGCAAAACTTTCAGAAAGCTGTGCCCATCAATATGAAACAAGCCAAGAAATGGCTGC 3017 Query 3103 AGCTACTTTGGCTTATAAATGCACAGAAGTGGCTTGCATGAGATTAGTGTATGGCAGAAG 3162 |||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 3018 AGCTGCTTTGGCCTATAAGTGCACAGAAGTGGCTTGCATGAGATTAGTGTATGGCAGAAG 3077 Query 3163 TCTAGGTCTGAGTGGAGAATGGAATGAATTGCAAAAAATGGTACAGATGACTCCTCAAGG 3222 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3078 TCTAGGTCTGAGTGGAGAATGGAATGAATTGCAAAAAATGGTACAGATGACTCCTCAAGG 3137 Query 3223 TGAATCACCGTCATCATCTGCATCTGATGTCGATAGTTTCAATCATCAAGGGGTGATTAA 3282 |||||||||||||||||| |||||||||||||||||| ||||||||||||||||| || | Sbjct 3138 TGAATCACCGTCATCATCCGCATCTGATGTCGATAGTCTCAATCATCAAGGGGTGGTTGA 3197 Query 3283 GAAGTCTGCTAAAACCAGAAGAGGTCTTTCCCATGTTGCCGGAAACCTTCTCCCTGTTGC 3342 |||||||||||||||| ||||||||||||||||||||| ||||| ||||| ||| |||| Sbjct 3198 TAAGTCTGCTAAAACCAAAAGAGGTCTTTCCCATGTTGCTGGAAATCTTCTTCCTTTTGC 3257 Query 3343 TAGAAGCCAACTAAATTTTGTTCCGCTATTGGACTTTACAGG-GAGCATGAATCTGGCAA 3401 ||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||| Sbjct 3258 TAGAAGCCAACTAAATTTTGTTCCGTTATTGGACTTTAC-GGAGAGCATGAATCTGGCAA 3316 Query 3402 TGGAGGCCTCAGCAAAATCCCAAAATGCTTTTAAAGCCGTCACTGACACCTCAGAAGAAA 3461 |||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct 3317 TGGAAGCCTCAGCAAAATCCCAAAATGCTTTTAAAGCAGTCACTGTCACCTCAGAAGAAA 3376 Query 3462 GAAAGCATGGAGACTGTATCTCTGCTATCAAAAAAGTTGTCGATTTTAGTTTCCATGATG 3521 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 3377 CAAAGCATGGAGACTGTATCTCTGCTATCAAGAAAGTTGTCGATTTTAGTTTCCATGATG 3436 Query 3522 TTGAAGCGCTTATAAAGATGATTGAGGTTGCCATGGATGCTCTAAGTTCATCAAGATTCG 3581 | ||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 3437 TGGAAGCACTTGTAAAGATGATTGAGGTTGCCATGGATGCTCTACGTTCATCAAGATTCG 3496 Query 3582 GTGGCCCAAAGTGTTGACTCTATTTTGTATATAGACCCTGGTCCTATAAAGAATAGAATA 3641 | ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct 3497 GCGGCCCAAAGTGTTGACTCTATTTTGTACATAGGTTCTGGTCCTATAAAGAATAGAATA 3556 Query 3642 GTGTTTCATGAACTTCCATAGAAAAATCTTAGTAAGTAGCATAGATTAGGAAAGGAAGAC 3701 ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct 3557 GTGTTTCATGAACTTCCATAGAAAAATCTTATTAATTAGCATAGATTAGGAAAGGAAGAC 3616 Query 3702 TTGGAGAGAGGACACTAGATAAGGTCTAAGTTTGCTA-TTTGCAGTAACTCTCAGGGTCC 3760 ||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||| Sbjct 3617 TTGGAAAGAGGACACTAGATAAGGTCTAAGTTTGC-ACTTTGCAGTAACTCTCAGGGTCC 3675 Query 3761 TGTTTCAGGTCTTTCTTCTTTTTGGTGTCTGGGTATTCAATATTAACTAAAGCATATTTA 3820 ||||||||||||||||||||||||||||| |||||||||| |||||| |||| ||||||| Sbjct 3676 TGTTTCAGGTCTTTCTTCTTTTTGGTGTCCGGGTATTCAAGATTAACAAAAGAATATTTA 3735 Query 3821 TAGAAGAGTAGGAGGATTCTTAGATATAGTCATTTAAAAGATCGGTTAGTGATAAGATTT 3880 ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| || Sbjct 3736 TAGAAGAGTAGCAGGATTCTTAGATATAGTCATTTAAAAGATTGGTTAGTGATAAGAGTT 3795 Query 3881 CTGACAAGACACTGCTCTA 3899 |||||||||||||||||| Sbjct 3796 GTGACAAGACACTGCTCTA 3814 Score = 1463 bits (792), Expect = 0.0 Identities = 925/988 (94%), Gaps = 14/988 (1%) Strand=Plus/Plus Query 1 GTCTGCaaaaaaaaTCGGAGACGCAAAACCAACTTGCCGCCGAATCTTCCTTAAACCCTC 60 ||||||| ||||| |||||||||||||| |||||||||||||||||||||||||| |||| Sbjct 1 GTCTGCAGAAAAATTCGGAGACGCAAAAGCAACTTGCCGCCGAATCTTCCTTAAA-CCTC 59 Query 61 AACGCTGCTCTTCGCCGCCGTTGAGACGATCACAGTGATCGAATCTTCCTTTTCAACTTT 120 |||| || ||||||||||| ||| ||||||||||||||||||||||||||| |||| | Sbjct 60 GACGCCGCACTTCGCCGCCG-TGACTCGATCACAGTGATCGAATCTTCCTTTTAAACTAT 118 Query 121 CTCG-TCTTTTGATCAAACGAGTTTGGTTGAGTTTTTGATAAACGTGATTAAGCGATTAA 179 |||| || ||||||||||||||||||||||||||| |||||||||||||||||||||| | Sbjct 119 CTCGTTC-TTTGATCAAACGAGTTTGGTTGAGTTTGTGATAAACGTGATTAAGCGATTGA 177 Query 180 TTTCGCG-TTTTAACAACAATCTAGATTGTCCTTTGGAGATTGAACAAATTTAGGG-TTT 237 ||||||| |||||| ||||||| | ||||| |||||||||||||||||||||||| ||| Sbjct 178 TTTCGCGTTTTTAA-AACAATCAATATTGT-GTTTGGAGATTGAACAAATTTAGGGTTTT 235 Query 238 TTGGGGATAATCTAAGTGTTTATGATTTGAAACTTTGTGTGTTTTGAGATTGTTTTGGGC 297 ||| ||||||||||||||||||||||||||| ||||||||||||||||| || ||||| Sbjct 236 TTGAGGATAATCTAAGTGTTTATGATTTGAATCTTTGTGTGTTTTGAGA---TTCTGGGC 292 Query 298 AATGTTGGATTTTCGAGACGGTTTGGTGGCGGCAGAGTTAGTGAGTGTTGGGGTTTAGGA 357 ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct 293 AATGTTGGATTTTCGAGACGGTTTGGTGGCGGCAGAGTTCGTGTGTGTTGGGGTTTAGGA 352 Query 358 AGTAGTAGTAGTTATTAGGGTTTGGAATTGGGTTATGTTTAGGG-TTTTACTAG-TTTAG 415 ||||||||||| ||||||||||||| ||||||||||||||||| ||||| ||| |||| Sbjct 353 GGTAGTAGTAGTAATTAGGGTTTGGACTTGGGTTATGTTTAGGGTTTTTA-TAGTTTTAC 411 Query 416 AAGATGGGAGAGGATTATGAGCTTGAAGAAGGAGAGATGAATTGTTCTTCTGATGAAGCT 475 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 412 AAGATGGGAGAGGATTATGAACTTGAAGAAGGAGAGATGAATTGTTCTTCTGATGAAGCT 471 Query 476 GTTGTTGATCTTGACGTTGATCTCTCTTACATTGACAAGAAGGTACAGAATGTACTTGGC 535 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 472 GTTGTTGATCTTGACGTTGATCTCTCTTACATTGACAAGAAGGTGCAGAATGTACTTGGC 531 Query 536 CACTTGCAAAAAGGTTTCGGAGAGGAAGCCCGGGACCGGTTTGGTCCGGAGATCTTTGAC 595 ||||||||||||| ||| ||||||| ||||| ||||| |||||||||| |||||| |||| Sbjct 532 CACTTGCAAAAAGATTTTGGAGAGGGAGCCCTGGACCAGTTTGGTCCGAAGATCTGTGAC 591 Query 596 TATGGATCATTTTTGCCCACTTACAAACGTTTGCCGGCTGTACCATCATGTCAAAGGAGT 655 |||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||| Sbjct 592 TATGGATCATTTTTGCCCACATACAAACGTTCGGTGGCTGTACCATCATGTCAAAGGAGT 651 Query 656 TCTCTAGGGAATCATGCTGTACAAAGAATTTCCAACAGTTTACCCGGGAAGAATGTGGTT 715 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 652 TCCCTAGGGAATCATGCTGTACAAAGAATTTCCAACAGTTTACCCGGGAAGAATGTGGTT 711 Query 716 CAGAAGTTTCAGTCACCCCCTGCTACATCTTGTAAACTAGTAAGAAATCAGGATCCTCAG 775 || ||||||||||||| |||||||||||||| | ||||||||||||||| |||||||||| Sbjct 712 CAAAAGTTTCAGTCACTCCCTGCTACATCTTCTGAACTAGTAAGAAATCGGGATCCTCAG 771 Query 776 AACTATCAAACTTCAGGATCTCTTTTGGCTCAAGCTCCAGGAAAAGTTCCCATAAATAAA 835 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 772 AACTATCAAACTTCAGGATCTCTTTTGGCTCAAGCTCCAGGAAAAGTTCCCATAAATAAA 831 Query 836 GGAAATGCAAGAACACCAGCCAATGATTTGCCTCATAATAAGCCGATCAGAGTTCGGATC 895 |||||||||||||||||||| |||||||||||| || |||||||||| |||||||||||| Sbjct 832 GGAAATGCAAGAACACCAGCAAATGATTTGCCTGATCATAAGCCGATTAGAGTTCGGATC 891 Query 896 AAAATGGGTTCTGAAATCTTGTCCCAAAGTGTCGCGATGGTTTGCAAGGATCTTGGTCTC 955 ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct 892 AAAATGGGTTCTGAAATCTTGTCCCAAAGTGTCACGATGGTTTGTAAGGATCTTGGTCTC 951 Query 956 GATGGTTCTCCAAATTCACCACCCCGAA 983 |||||||||||||||||||||||||||| Sbjct 952 GATGGTTCTCCAAATTCACCACCCCGAA 979 Score = 1406 bits (761), Expect = 0.0 Identities = 911/981 (93%), Gaps = 19/981 (2%) Strand=Plus/Plus Query 1017 ATACATCTCTAGGGAAGACAAGTGAATCTCCTTCCCGCATTCTTCAGGAAATGACTGCCA 1076 |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 983 ATACATCTCTGGGGAAGACAAGTGAATCTCCTTCCCGCATTCTTCGGGAAATGACTGCCA 1042 Query 1077 TTTCTGTTCCAGAGGATCTACTGATGTCGCCTCTTCCTGATAGTCTGCTCCTAGTGAAGG 1136 ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct 1043 TTTCTGTTCCAGAGGATCTACTGATGTCGCCTCTTCCTGATAGTCTGCTTCTTGTGAAGA 1102 Query 1137 ATAAGAAGAAGCAATATACTTTATTAGACAATCAACCTATGATTAAGACAGGAAAGAAAT 1196 ||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||| || Sbjct 1103 ATAAGGAGAAGCGATATACTTTATTAGACAATCAACCTGTGATTAAGACAGGAAAGGAAC 1162 Query 1197 CTTCTATTCAGATACAGAACAAGTTCTCGGATGTTTTATGTTGTGAGAAAACTCCAATTG 1256 |||||||||||| |||||||||||| ||||||| ||| |||||||||||||||||||||| Sbjct 1163 CTTCTATTCAGACACAGAACAAGTTTTCGGATGCTTTGTGTTGTGAGAAAACTCCAATTG 1222 Query 1257 GAAGGAGAAGGAAAGAGGTAGACTGTTTTCATGCCACCACTTGGAATGAGACGAAGAAGC 1316 |||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||| Sbjct 1223 GAAGGAGAAGGAAAGAGGCAGACTGCTTTGATGCCACCACTTGGAATGAGACGAAGAAGC 1282 Query 1317 ATAAAGTTTTATCCACTGGTCAGCTAGCCAGGGATAACTCAGCTTGTGGTTTAGGTGGGG 1376 | |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1283 AAAAAGTTTTTTCCACTGGTCAGCGAGCCAGGGATAACTCAGCTTGTGGTTTAGGTGGGG 1342 Query 1377 CAAGTCTTACTACTGATGGGTTTACAACAAAAAGTAACTTGCAGGAAGGTTGTAGAAAAG 1436 ||||| || ||| | |||||||||||||||||||||||||||||||||| Sbjct 1343 CAAGT-TT--TAC---------T---ACAAAAAGTAACTTGCAGGAAGGTTGTAGAAAAG 1387 Query 1437 ATGGTGAAAGTGATCCCAGAGTCGCAAATAAAATAAAGTTTGTTGGGTTGCATGCTGTGA 1496 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1388 ATGGAGAAAGTGATCCCAGAGTCGCAAATAAAATAAAGTTTGTTGGGTTGCATGCTGTGA 1447 Query 1497 AAGAGaaaaaaaCATGTCCGACAAAGTTGCAACAGAACCGTAGCAAATATCGTATTGGTG 1556 | |||||||| ||||||||||||||||||||||||||| |||||||| ||||| |||||| Sbjct 1448 AGGAGAAAAAGACATGTCCGACAAAGTTGCAACAGAACAGTAGCAAAAATCGTTTTGGTG 1507 Query 1557 ATAAAGTTTTATCAAAGATGCCTTTG-AAGGATGCCGCATATATAGGTCACAATAGCATG 1615 ||||| |||||||||| ||||| ||| ||||||||| ||||| ||||||||||||||||| Sbjct 1508 ATAAATTTTTATCAAATATGCC-TTGCAAGGATGCCACATATGTAGGTCACAATAGCATG 1566 Query 1616 GACACTGGGTTTGATTTTGCGGTTGCACCTTCTTCCACCAGTGTTGACCTAGATTATTGG 1675 |||| | |||||||||| |||||||| |||||||||||||||||||| ||||| ||||| Sbjct 1567 GACATTAAGTTTGATTTTCCGGTTGCAACTTCTTCCACCAGTGTTGACGTAGATAATTGG 1626 Query 1676 GCCCAATGTGAGAGTTGTGAGAAATGGCGGCTACTGCCCTATGACCTGAATACTGAGAAG 1735 |||||||||||||||||||||| |||||||||| ||||||||| |||||||| |||| || Sbjct 1627 GCCCAATGTGAGAGTTGTGAGACATGGCGGCTATTGCCCTATGGCCTGAATATTGAGCAG 1686 Query 1736 CTGCCTGATAAGTGGTTGTGTAGCATGCAAACCTGGCTGCCTGGAATGAACCACTGTGGC 1795 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1687 CTGCCTGATAAGTGGTTGTGTAGCATGCAAACCTGGCTGCCTGGAATGAACCACTGTGGC 1746 Query 1796 GTCAGCGAGGAAGAGACTACAAACGCAATTAAATCCTTTCATGCTAGTGAGGGTCATGGT 1855 |||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct 1747 GTCAGCAAGGAAGAGACTATAAACGCAATTAAATCCTATCATGCTAGTGAGGGTCATGGT 1806 Query 1856 CCTGACACTGGTGTTAAACTCCTCTCTGATGTTCGTAATGCTGATAAAATCTACCAACCT 1915 |||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct 1807 CCTGTCACTGGTGTTAAACTCCTCTCTGATGTTAGTAATGCTGATAAAAGCTACCAACCT 1866 Query 1916 TTAACTTCTGGTTCATTGCCTAATCCAATTGAAAAGAAGTCTAACGT-AGAAGACTTATC 1974 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct 1867 TTAACTTCTGGTTCATTGCCTAATCCAATTGAAAAGAAGTCTAACGTCA-AAGACTTATC 1925 Query 1975 GCAAGGAGTTTCAAGCAACAT 1995 ||||||||||||| ||||| Sbjct 1926 ACAAGGAGTTTCAAAAAACAT 1946 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 149375974025 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5