BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT4G17970.1 Length=1757 Score E Sequences producing significant alignments: (Bits) Value Ahg493074 jgi|Araly1|493074|fgenesh2_kg.7__2507__AT4G17970.1 2662 0.0 Ahg494317 jgi|Araly1|494317|fgenesh2_kg.8__133__AT5G46610.2 918 0.0 Ahg356337 jgi|Araly1|356337|fgenesh1_pg.C_scaffold_8000124 743 0.0 > Ahg493074 jgi|Araly1|493074|fgenesh2_kg.7__2507__AT4G17970.1 Length=1724 Score = 2662 bits (1441), Expect = 0.0 Identities = 1639/1732 (95%), Gaps = 23/1732 (1%) Strand=Plus/Plus Query 41 gagagagagagagTACCAATTTCTCTCCCTCAAAATGTCCAATAAGGTTCACGTAGGGAG 100 ||||||||||||| ||||||| ||||||||||||||||||| || |||||||||||||| Sbjct 1 GAGAGAGAGAGAG--CCAATTTGTCTCCCTCAAAATGTCCAACAAAGTTCACGTAGGGAG 58 Query 101 CCTTGAGATGGAGGAAGGTTTGAGCAAGACGAAGTGGATGGTTCTCGAACCTTCTGAAAA 160 | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || Sbjct 59 CATTGAGATGGAGGAAGGTTTGAGCAAGACGAAGTGGATGGTTCTAGAACCTTCTGAGAA 118 Query 161 GATTAAGAAGATTCCGAAAAGGCTTTGGAATGTCGGAAAAGAAGATCCGAGGAGAGTGAT 220 ||| |||| ||| |||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 119 GATCAAGAGGATACCGAAAAGGCTTTGGAGTGTCGGAAAAGAAGATCCGAGGAGAGTGAT 178 Query 221 ACATGCCCTTAAAGTAGGTCTTTCCTTGACACTCGTTTCTTTGCTATATCTCATGGAGCC 280 ||||||||||||||||||||||||| ||||||| || |||||| |||||||||||||||| Sbjct 179 ACATGCCCTTAAAGTAGGTCTTTCCATGACACTTGTATCTTTGTTATATCTCATGGAGCC 238 Query 281 TCTCTTCAAAGGCATTGGAAGCAATGCTATTTGGGCAGTCATGACTGTCGTCGTCGTCCT 340 ||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct 239 TCTCTTCGAAGGCATTGGAAGCAATGCTATTTGGGCCGTCATGACAGTCGTCGTCGTCCT 298 Query 341 CGAGTTCTCTGCCGGTGCAACGTTGTGCAAAGGGCTTAATAGAGGATTAGGGACACTAAT 400 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 299 TGAGTTCTCTGCCGGTGCAACGTTGTGCAAAGGGCTTAATAGAGGATTAGGGACACTAAT 358 Query 401 TGCGGGATCTTTGGCATTTTTCATTGAGTTTGTAGCTAATGATTCCGGCAAAGTCCTTCG 460 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 359 TGCGGGATCTTTGGCATTTTTCATTGAGTTTGTAGCTAATGATTCCGGCAAAGTCCTTCG 418 Query 461 AGCTATCTTCATTGGCACTGCTGTTTTTATCATTGGAGCGGCTGCTACTTATATAAGATT 520 |||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct 419 AGCTATTTTCATTGGCACTGCTGTTTTTGTCATTGGAGCGGCTGCAACTTATATAAGATT 478 Query 521 TATACCATACATAAAGAAGAATTACGATTACGGTGTTGTGATATTTCTCTTGACGTTCAA 580 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 479 TATACCATACATAAAGAAGAATTACGATTATGGTGTTGTGATATTTCTCTTGACGTTCAA 538 Query 581 TCTTATAACGGTGTCAAGCTATCGAGTAGATAGTGTGATAAACATAGCACACGATAGATT 640 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 539 TCTTATAACGGTGTCAAGCTATCGAGTAGATAGTGTGATAAACATAGCACACGATAGATT 598 Query 641 CTACACTATAGCCGTTGGTTGCGGAATCTGTCTTTTCATGAGCCTTCTTGTTTTTCCTAT 700 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 599 CTACACTATAGCCATTGGTTGCGGAATCTGTCTTTTCATGAGCCTTCTTGTTTTTCCTAT 658 Query 701 TTGGTCTGGTGAAGATCTACACAAGACCACCGTTGGTAAACTCCAAGGCCTCTCTCGCTC 760 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 659 TTGGTCTGGTGAAGATCTACACAAGACCACCGTTGGTAAACTCCAAGGCCTTTCTCGCTC 718 Query 761 TATAGAAGCATGTGTGGATGAGTACTTTGAGGAGAAAGAGAAAGAAAAAACAGATTCAAA 820 ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 719 TATTGAAGCATGTGTGAATGAGTACTTTGAGGAGAAAGAGAAAGAAAAAACAGATTCAAA 778 Query 821 AGACAGAATCTACGAAGGGTATCAAGCTGTTTTGGATTCTAAATCTACTGACGAAACACT 880 ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct 779 AGACAGAATCTACGAAGGGTATCAAGCTGTTTTGGATTCTAAATCCACTGATGAAACACT 838 Query 881 TGCATTATATGCAAATTGGGAACCAAGACACACTCTACGTTGTCATAGATTTCCATGTCA 940 ||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||| Sbjct 839 TGCATTATATGCAAATTGGGAGCCGAGACACACACTACGTTGTCATAGATTTCCATGTCA 898 Query 941 ACAATATGTTAAAGTTGGAGCTGTTCTTCGTCAATTTGGTTACACTGTTGTTGCTCTTCA 1000 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 899 ACAATATGTTAAAGTTGGAGCTGTTCTTCGTCAATTTGGTTACACTGTTGTTGCTCTTCA 958 Query 1001 CGGTTGCTTACAAACTGAGATTCAAACTCCAAGATCCGTTCGCGCGCTTTTTAAAGATCC 1060 ||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||| Sbjct 959 CGGTTGCTTACAAACCGAGATTCAAACTCCAAGATCTGTTCGCGCGCTTTTCAAAGATCC 1018 Query 1061 TTGTGTAAGATTAGCCGGAGAAGTATGCAAAGCTTTGACGGAACTCGCAGATAGCATCTC 1120 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1019 TTGTGTAAGATTAGCCGGAGAAGTATGCAAAGCTTTGACGGAACTCGCGGATAGCATCTC 1078 Query 1121 AAACCACCGTCATTGTTCACCGGAGATTCTATCCGATCATCTCCACGTGGCACTTCAAGA 1180 |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1079 AAACCACCGTCACTGTTCACCGGAAATTCTATCCGATCATCTCCACGTGGCACTTCAAGA 1138 Query 1181 TCTTAATTCCGCTATCAAGTCTCAGCCTAAACTCTTCCTTGGCTCTAACCTCCATCGTCA 1240 |||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||| | Sbjct 1139 TCTTAATTCCGCCATCAAGTCTCAGCCTAAACTCTTCCTTGGTTCTAATCTCCATCGT-A 1197 Query 1241 CAATAATAAACACCAAAACGGTAGCATTTCCAATAACAAACA-C----C---A---TCA- 1288 | ||| | ||||||||||| ||| |||| | ||||||||| | | | || Sbjct 1198 -A-TAA-A--CACCAAAACGGCAGCGTTTCTAGTAACAAACATCAAAACGGTACCGTCTC 1252 Query 1289 GC---GCAACAGTAGTAACAGTGGAAAAGATCTAAACGGCGACGTTTCTCTTCAAAATAC 1345 || |||||| ||||| | |||||||||| |||||||||||||||||||||||||||| Sbjct 1253 GCAACGCAACAACAGTAATATTGGAAAAGATATAAACGGCGACGTTTCTCTTCAAAATAC 1312 Query 1346 CGAAACCGGTACACGTAAAATTACAGAAACCGGTTCACGTCAAGGCCAAAACGGAGCCGT 1405 |||||||||||| |||||| |||||||||||||| |||||||||| |||||||||||||| Sbjct 1313 CGAAACCGGTACGCGTAAAGTTACAGAAACCGGTGCACGTCAAGGGCAAAACGGAGCCGT 1372 Query 1406 TTCACTTTCAAGCTTTAGGACTGACACGTCAGCTTTAATGGAGTACCGGAGATCGTTCAA 1465 ||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||| || Sbjct 1373 TTCGCTTTCGAGCTTTAGGACTGACACGTCAGCTTTAATGGAGTATCGGAGATCGTTTAA 1432 Query 1466 GAACAGTAACTCAGAGATGTCGGCGGCGGGAGAGAGGAGGATGTTACGGCCACAGCTGAG 1525 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1433 GAACAGTAACTCCGAGATGTCGGCGGCGGGAGAGAGGAGGATGTTACGGCCACAGCTGAG 1492 Query 1526 CAAAATCGCGGTGATGACGAGTCTCGAATTCTCGGAGGCATTACCGTTCGCGGCGTTTGC 1585 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct 1493 CAAAATCGCGGTGATGACGAGCCTCGAATTCTCGGAGGCTTTACCGTTCGCGGCGTTTGC 1552 Query 1586 GTCGTTGCTAGTGGAAATGGTGGCGAGGCTCGATAATGTAATCGAAGAAGTTGAGGAATT 1645 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1553 GTCGTTGCTAGTGGAAATGGTGGCGAGGCTTGATAATGTAATCGAAGAAGTTGAGGAATT 1612 Query 1646 GGGAAGGATCGCAAGTTTTAAGGAGTATGATAACAAGCGAGATCAGACGGCTGACGATGT 1705 ||||||||||||| |||||||||||| ||||||| |||||||| ||||||||||||||| Sbjct 1613 GGGAAGGATCGCATCTTTTAAGGAGTACGATAACACGCGAGATCCGACGGCTGACGATGT 1672 Query 1706 CCGATGCGAAAACCCGGCGAATGTTACGATCAGTGTCGGTGCCGCGGAATGA 1757 |||||||||||| |||||||||||||||||||||||||| ||||| |||||| Sbjct 1673 CCGATGCGAAAAACCGGCGAATGTTACGATCAGTGTCGGCGCCGCTGAATGA 1724 > Ahg494317 jgi|Araly1|494317|fgenesh2_kg.8__133__AT5G46610.2 Length=1911 Score = 918 bits (497), Expect = 0.0 Identities = 909/1102 (82%), Gaps = 51/1102 (5%) Strand=Plus/Plus Query 159 AAGATTAAGAAGATTCCGAAA-AGGCTTTGGAATGTCGGAAAAGAAGATCCGAGGAGAGT 217 ||||| ||||||||| | ||| || | ||||| || |||||||| ||||| |||||||| Sbjct 151 AAGATCAAGAAGATT-CTAAAGAGTATATGGAAAGTTGGAAAAGATGATCCTAGGAGAGT 209 Query 218 GATACATGCCCTT-AAAGTAGGTCTTTCCTTGACACTCGTTTCTTTGCTATATCTCATGG 276 || ||||| | || |||||||| |||| || ||||| || || || | |||||||||| Sbjct 210 GAAACATG-CTTTAAAAGTAGGAGTTTCTTTAACACTTGTGTCCTTATTGTATCTCATGG 268 Query 277 AGCCTCTCTTCAAAGGCATTGGAAGCAATGCTATTTGGGCAGTCATGACTGTCGTCGTCG 336 |||||||||||||||||||||||| | ||||||||||||||||||||| ||||| |||| Sbjct 269 AGCCTCTCTTCAAAGGCATTGGAAATAGTGCTATTTGGGCAGTCATGACCGTCGTGGTCG 328 Query 337 TCCTCGAGTTCTCTGCCGGTGCAACGTTGTGCAAAGGGCTTAATAGAGGATTAGGGACAC 396 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 329 TCCTCGAGTTCTCTGCCGGTGCCACGTTGTGCAAAGGGCTTAATAGAGGATTAGGGACAC 388 Query 397 TAATTGCGGGATCTTTGGCATTTTTCATTGAGTTTGTAGCTAATGATTCCGGCAA-AGTC 455 ||||||| |||||||||||||||||||| || ||||| ||||||||||||||||| | | Sbjct 389 TAATTGCTGGATCTTTGGCATTTTTCATCGAATTTGTCGCTAATGATTCCGGCAAGATT- 447 Query 456 CTTC-GAGCTATCTTCATTGGCACTGCTGTTTTTATCATTGGAGCGGCTGCTA-CTTATA 513 ||| ||||||| ||||||||| |||| ||||| || || |||||| ||| || | ||| Sbjct 448 -TTCCGAGCTATTTTCATTGGCGCTGCAGTTTTCATAATCGGAGCG-CTGATAACCTATT 505 Query 514 TAAGATTTATACCATACATAAAGAAGAATTACGATTACGG--TGTTGTGATATTTCTCTT 571 | |||||||| ||||||||||| ||||| ||||||||||| || | | ||||||||||| Sbjct 506 TGAGATTTATTCCATACATAAAAAAGAACTACGATTACGGCATGCT-T-ATATTTCTCTT 563 Query 572 GACGTTCAATCTTATAACGGTGTCAAGCTATCGAGTAGATA-GTGTGAT-AAACATAGCA 629 |||||||||||| ||||| ||||| || ||| |||| |||| | ||||| ||| || ||| Sbjct 564 GACGTTCAATCTAATAACAGTGTCGAGTTATAGAGTTGATACG-GTGATTAAA-ATTGCA 621 Query 630 CACGATAGATTCTACACTATAGCCGTTGGT-TGCGGAATCTGTCTTTTCATGAGCCTTCT 688 || || |||||||| ||||||||| | ||| | || || || || ||||||||||| | Sbjct 622 CATGAGAGATTCTATACTATAGCCATGGGTGTT-GGCATTTGCCTACTCATGAGCCTT-T 679 Query 689 TG-TTTTTCCTATTTGGTCTGGTGAAGATCTACACAAGA-CCACCGTTGGTAAACTCCAA 746 || |||||||||||||||||||||| || || ||||| | ||||||| | ||| ||||| Sbjct 680 TGGTTTTTCCTATTTGGTCTGGTGAGGACCTTCACAA-ATCCACCGTCGCTAAGTTCCAA 738 Query 747 GGCCTCTCTCGCTCTATAGAAGCATGTGTGGATGAGTACTTTGAGGAGAAAGAGAAA--- 803 ||||||||| || || |||||||||||| ||||||||||||| ||| | |||||| Sbjct 739 GGCCTCTCTTATTCCATTGAAGCATGTGTGAATGAGTACTTTGAAGAGGAGGAGAAAAAC 798 Query 804 GAA-AAA-A-CAGATTCA--A-AAGACAGAATCTACGAAGGG-TATCAAG-CTGTTTTGG 855 ||| ||| | |||||| | | |||||| ||||| || || ||| ||| ||||||||| Sbjct 799 GAAGAAACATCAGATTTATCAGAAGACACTATCTAT-AACGGATAT-AAGACTGTTTTGG 856 Query 856 ATTCTAAATCTACTGACGAAACACTTGCATTATATGCAAATTGGGAACCAAGACACACTC 915 |||| ||||| | || ||| |||||||| | ||||||| |||||| ||||||||||| Sbjct 857 ATTCCAAATCCGCCGATGAAGCACTTGCAATGTATGCAAGTTGGGAGCCAAGACACACAA 916 Query 916 TACGTTGTCATAGATTTCCATGTCAACAATATGTTAAAGTTGGAGCTGTTCTTCGTCAAT 975 || |||||||||||||||||| |||| ||||||||||||||| |||||||||||| | Sbjct 917 GACATTGTCATAGATTTCCATGGAAACATTATGTTAAAGTTGGATCTGTTCTTCGTCTGT 976 Query 976 TTGGTTACACTGTTGTTGCTCTTCACGGTTGCTTACAAACTGAGATTCAAACTCCAAGAT 1035 ||||||||||||||||||||||||| ||||||||| |||| || ||||| ||||| || | Sbjct 977 TTGGTTACACTGTTGTTGCTCTTCATGGTTGCTTAAAAACCGAAATTCAGACTCCGAGGT 1036 Query 1036 C-CGTTCGCGCG-CTTTTTAAAGATCCTTGTGTAAGATTAGCCGGAGAAGTATGCAAAGC 1093 | | |||| | | || || || |||||||| |||||| ||||||||||| | ||||| | Sbjct 1037 CTC-TTCGTG-GACTCTTCAAGGATCCTTGCGTAAGACTAGCCGGAGAAATCTGCAAGGT 1094 Query 1094 TTTGACGGAACTCGCAG-ATAGCATCTC-AAACC-ACCGTCATTGTTCACCGGAGATTCT 1150 |||| | |||||||| | | ||||| | ||||| || |||| || || ||||||||||| Sbjct 1095 TTTGTCCGAACTCGCTGCA-AGCAT-TAGAAACCGAC-GTCACTGCTCGCCGGAGATTCT 1151 Query 1151 ATCCGATCA-TCTCCACGTGGCACTT-CAAGATCTTAATTCCGCTATCAAGTCTCAGCCT 1208 ||||| || |||||| |||||| || |||||||| || | || || || || || ||| Sbjct 1152 TTCCGA-CAGTCTCCAAGTGGCA-TTACAAGATCTCAACACAGCCATTAAATCCCAACCT 1209 Query 1209 AAACTCTTCCTTGGCTCTAACC 1230 ||||||||||| ||| |||||| Sbjct 1210 AAACTCTTCCTCGGCGCTAACC 1231 > Ahg356337 jgi|Araly1|356337|fgenesh1_pg.C_scaffold_8000124 Length=1635 Score = 743 bits (402), Expect = 0.0 Identities = 926/1169 (79%), Gaps = 75/1169 (6%) Strand=Plus/Plus Query 141 GTTCTCGAACCTTCTGAA-AAGATTAAGAAGATTCCGAAA-AGGCTTTGGAATGTCGGAA 198 ||||| || |||| ||| ||||| ||||||| | | ||| | || |||||||| |||| Sbjct 76 GTTCT-AAAACTTCCGAAGAAGATGAAGAAGACT-CTAAAGAATCTATGGAATGTGGGAA 133 Query 199 AAGAAGATCCGAGGAGAGTGATACATGCCCTT-AAAGTAGGTCTTTCCTTGACACTCGTT 257 |||||||||||||||||||||||||||| || |||||||| || |||| ||||| || Sbjct 134 AAGAAGATCCGAGGAGAGTGATACATGCT-TTGAAAGTAGGAGTTGCCTTAACACTTGTG 192 Query 258 TCTTTGCTATATCTCATGGAGCC-TCTCTTCAAAGGCATTGGAAGCAATGCTA-TTTGGG 315 ||||| | ||||||||||| || | |||||||||| ||| || ||||| | |||||| Sbjct 193 TCTTTATTGTATCTCATGGAACCAT-TCTTCAAAGGTGTTGTAAAAAATGC-ACTTTGGG 250 Query 316 CAGTCATGACTGTCGTCGTCGTCCTCGAGTTCTCTGCCGGTGCAACGTTGTGCAAAGGGC 375 |||||||||| ||||| ||||| ||||||||||||||||||||||| || ||||||| Sbjct 251 CAGTCATGACCGTCGTTGTCGTTCTCGAGTTCTCTGCCGGTGCAACATTACGCAAAGGA- 309 Query 376 TTAA-TAGAGGATTAGGGACACTAATTGCGGGATCTTTGGCATTTTTCATTGAGTTTGTA 434 |||| ||||||||||||||||||||| || ||||||||||||||||| ||||||| || Sbjct 310 TTAAATAGAGGATTAGGGACACTAATAGCAGGATCTTTGGCATTTTTTATTGAGTGGGTT 369 Query 435 GCTAATGATTCCGGCAAAGTCCTTCG-AGCTATCTTCATTGGCACTGCTGTTTTTATCAT 493 |||| | ||||||| ||| |||| || || |||||||||||||||| ||||||| ||||| Sbjct 370 GCTATTCATTCCGGTAAAATCCT-CGGAGGTATCTTCATTGGCACTTCTGTTTTCATCAT 428 Query 494 TGGAGCGGCTGCTA-CTTATATAAGATTTATACCATACATAAAGAAGAATTACGATTACG 552 ||| || | | || | || || |||||||| || ||||||||||| || || || |||| Sbjct 429 CGGATCGAC-GATAACATACATGAGATTTATTCCGTACATAAAGAAAAACTATGACTACG 487 Query 553 GTGTTG-T-GATATTTCTCTTGACGTTCAATCTTATAACGGTGTCAAGCTATC-GAGTAG 609 || | | | | ||||||| |||||||| ||||| || || || || || || | |||| | Sbjct 488 GTAT-GCTTG-TATTTCTTTTGACGTTTAATCTAATCACAGTATCGAGTTA-CAGAGTCG 544 Query 610 ATAGTGTGATAAACATAGCACA--CGATAGATTCTACACTATAGCCGTTGGT-TGCGGAA 666 ||| |||||| || || ||||| ||| |||| || ||||| | ||||| | ||| | Sbjct 545 ATACTGTGATTAAGATCGCACATACGA--GATTATATACTATTGGTATTGGTAT-CGGCA 601 Query 667 TCTGTCTTTTCATGAGCCTTCTTG-TTTTTCCTATTTGGTCTGGTGAAGATCTACACAAG 725 | ||||| ||||||||||| ||| ||||||| || |||||||| || || || || || Sbjct 602 TTTGTCTCGTCATGAGCCTT-TTGGTTTTTCCGATATGGTCTGGCGATGACCTTCATAA- 659 Query 726 A-CCACCGTTGGTAAACTCCAAGGCCTCTCTCGCTCTATAGAAGCATGTGTGGATGAGTA 784 | ||||| || ||| ||||||||||||||||| | |||||||||||||||| ||||||| Sbjct 660 ATCCACCTTTACTAAGCTCCAAGGCCTCTCTCGATGTATAGAAGCATGTGTGCATGAGTA 719 Query 785 CTTTGAGGAGAAAGAGAAAGAA-AA-AA-CA--G-ATTCA-AA----A-GAC-A-GA--- 827 |||||||| || |||||||| || || || | |||| || | || | || Sbjct 720 TTTTGAGGACAAGGAGAAAGACCAAGAATCATCGGATTCTGAATCTGATGATGAAGACCT 779 Query 828 A-TCTACGAAGGGTATCAAG-CTGTTTTGGATTCTAAATCTACTGACGAAACACTTGCAT 885 | ||||| |||||||| ||| ||||||||||||||||||| |||| ||| |||| ||| Sbjct 780 AATCTACAAAGGGTAT-AAGACTGTTTTGGATTCTAAATCCGCTGATGAAGCACTCGCAA 838 Query 886 TATATGCAAATTGGGAACCAAGACACACTCTA-CGTTGTCATAGATTTCCATGTCAACAA 944 | | |||||| ||||| | |||| |||| | | ||| |||| |||||||| ||||||| Sbjct 839 TGTTTGCAAAATGGGAGCTAAGAAACACAA-AGCTTTGCCATAAATTTCCATCTCAACAA 897 Query 945 TATGTTAAAGTTGGAGCTGTTCTTCGTCAA-TTTGGTTACACTGTTGTTGCTCTTCACGG 1003 ||| | ||||||||| | |||||||| ||| ||| |||||||||||||||||||||| || Sbjct 898 TATATCAAAGTTGGATCCGTTCTTCG-CAAGTTTAGTTACACTGTTGTTGCTCTTCATGG 956 Query 1004 TTGCTTACAAACTGAGATTCAAACTCCAAGATCCGTTCGCG-CGCTTTTTAAAGATCCTT 1062 |||||||||||||||||||| |||||||| || |||| | || || |||||||||| Sbjct 957 CTGCTTACAAACTGAGATTCAGACTCCAAGGTCTATTCGTATC-CTATTCAAAGATCCTT 1015 Query 1063 GTGTAAGATTAGCCGGAGAAGTATGCAAAG-CTTTGACGGAACTCGCAGATAGCATCTCA 1121 |||| ||| ||||||||||| | ||||||| ||| | | |||||| | || | ||| | | Sbjct 1016 GTGTTAGACTAGCCGGAGAAATCTGCAAAGTCTT-GTCTGAACTCTCCGAAAACAT-TAA 1073 Query 1122 AA-CC-ACCGTCATTGTTCACCGGAGATTCTATCCGATCA-TCTCCACGTGGCACTTCAA 1178 || || || |||| || |||||||||||||| ||||| || |||| | | |||| || || Sbjct 1074 AAACCGAC-GTCAATGCTCACCGGAGATTCTCTCCGA-CAGTCTCGAAGCGGCA-TTAAA 1130 Query 1179 -GATCTTAATTCCGCTATCAAGTCTCAGCCTAAACTCTTCCTT-GGCTCTAACCTCCATC 1236 ||||| || || | ||||| || || ||||| |||||| || ||||||||||| || | Sbjct 1131 AGATCTCAACTCTACAATCAAATCACAACCTAAGCTCTTC-TTAGGCTCTAACCTTCA-C 1188 Query 1237 -GTCACA--A-TAATAAACACCAAAACGG 1261 || ||| | ||| ||||||| |||||| Sbjct 1189 AGTAACATCACTAACAAACACCTAAACGG 1217 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 65934214095 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5