BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT4G21650.1 Length=2439 Score E Sequences producing significant alignments: (Bits) Value Ahg492710 jgi|Araly1|492710|fgenesh2_kg.7__2143__AT4G21650.1 3594 0.0 Ahg354618 jgi|Araly1|354618|fgenesh1_pg.C_scaffold_7001791 1834 0.0 Ahg354619 jgi|Araly1|354619|fgenesh1_pg.C_scaffold_7001792 1814 0.0 > Ahg492710 jgi|Araly1|492710|fgenesh2_kg.7__2143__AT4G21650.1 Length=2411 Score = 3594 bits (1946), Expect = 0.0 Identities = 2283/2442 (93%), Gaps = 38/2442 (2%) Strand=Plus/Plus Query 1 CACACACTTCTCACTTAAGAAAATGAATAACTCTTTACAAAGTTCTAAACTTGTGCTTCT 60 ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct 1 CACACACTTCTCACTTAAGAAAATGGATAACTCTTTACAAAGTGCTAAACTTGTGCTTCT 60 Query 61 ATTGGCTATTGCTTTGGTCCTATTTCTTAACACGGAGCTGGATTTTCTTACAGCTGCTGG 120 | ||||||||||||||||||||||||||||||| |||||| |||||| || | ||||||| Sbjct 61 ACTGGCTATTGCTTTGGTCCTATTTCTTAACACAGAGCTGAATTTTCCTATAACTGCTGG 120 Query 121 AGCCTTAGACAGTGATAGCAAAGTTTATATAGTGTATCTTGGCGAAAGAGAACACGATGA 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 AGCCTTAGACAGTGATAGCAAAGTTTATATAGTGTATCTTGGCGAAAGAGAACACGATGA 180 Query 181 TCCTGAACTTGTCACAGCTTCTCATCACCAGATGCTTGAATCACTTCTTCAAAGCAAAGA 240 ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 181 TCCAGAACTTGTCACAGCTTCTCATCACCAAATGCTTGAATCACTTCTTCAAAGCAAAGA 240 Query 241 AGACGCACAAAACTCCCTGATCTACAGCTACCAACATGGATTCTCTGGTTTCGCGGCGCT 300 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| || Sbjct 241 AGACGCACGTAACTCGCTGATCTACAGCTACCAACATGGATTCTCTGGTTTCGCGGCACT 300 Query 301 TCTTACATCATCACAAGCTAAGAAAATTTCAGAGCATCCAGAAGTTATCCATGTTATACC 360 |||||||||||||||||| |||||||||||||| ||||||| ||| |||||| ||||||| Sbjct 301 TCTTACATCATCACAAGCAAAGAAAATTTCAGAACATCCAGCAGTAATCCATTTTATACC 360 Query 361 AAACCGGATTCGGAAACTTAAAACCACAAGAGCTTGGGATCACCTTGGCCTCTCTCCAAT 420 ||||||||||| |||||| |||||||||||| |||||||||||||||| ||||||||| | Sbjct 361 AAACCGGATTCTGAAACTGAAAACCACAAGAACTTGGGATCACCTTGGTCTCTCTCCAGT 420 Query 421 TCCAACTTCTTTTTCTTCATTATCATCTGTAAAAGGTCTTCTTCATGACACCAACTTGGG 480 | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 TACATCTTCTTTTTCTTCATTATCATCTGTAAAAGGTCTTCTTCATGACACCAACTTGGG 480 Query 481 CAGTGAAGCTATCATCGGTGTCATTGATTCCGGGATATGGCCAGAGTCAAAGGCAGTCAA 540 ||| |||||||| ||||||||||| |||||||| ||||||||||||||||||||| |||| Sbjct 481 CAGAGAAGCTATTATCGGTGTCATCGATTCCGGAATATGGCCAGAGTCAAAGGCACTCAA 540 Query 541 CGATCAAGGCCTTGGACCAATACCTAAGCGTTGGAGAGGAAAATGTGAACCTGGAGAACA 600 ||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 541 CGATCAAGGGCTTGGACCAATACCTAAGCGTTGGAGAGGAAAATGTGAATCAGGAGAACA 600 Query 601 GTTTAACGCCACAATACATTGCAACAACAAGCTAATAGGAGCTAGGTACTATCTAAACGG 660 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 601 GTTTAACTCCACAATACATTGCAACAACAAGCTAATAGGAGCTAAGTACTATCTAAACGG 660 Query 661 TGTAGTCGCCGCAATTGGAGGAAAATTCAACAGAACAATCATCCAAGATTTCCAATCCAC 720 ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 661 TGTAGTCGCTGCAATTGGAGGAAAATTCAACAGAACAATCATCCAAGATTTGAAATCCAC 720 Query 721 CAGAGATGCAAACGGTCACGGTACACATACAGCCACAATAGCTGGTGGCTCATTTGTCCC 780 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| || || Sbjct 721 CAGAGATGCAAACGGTCACGGCACACATACAGCCACAATAGCTGGTGGCTCATTCGTTCC 780 Query 781 CAACGTGAGCTACTTTGGTTTAGCCCAAGGTCTTG-TCCGAGGTGGTGCTCCTCGAGCCC 839 ||||||||||| || |||| |||||| |||| ||| ||||||||||||||||||| |||| Sbjct 781 CAACGTGAGCTTCTATGGTCTAGCCCGAGGT-TTGGTCCGAGGTGGTGCTCCTCGGGCCC 839 Query 840 GAATAGCCTCGTACAAGGCGTGTTGGAACGTAATGAGAGATGAAGGAGGAGGAACTGATG 899 | ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| Sbjct 840 GCATAGCCTCGTACAAGGCGTATTGGAACGTAATGGGAGATGAAGGAGGAGGAACTGATG 899 Query 900 GAAGATGCACATCTGCTGATATGTGGAAGGCTTTTGATGATGCTATACATGATGGGGTTG 959 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 900 GAAGATGCACAACTGCTGATATGTGGAAGGCTTTTGATGATGCTATACATGATGGGGTTG 959 Query 960 ATGTTTTGTCGGTTTCTATCGGGGGAGGTATTCCCGAGGATTCGGAAGTCGATAAGCTCG 1019 ||||||||||||||||||| ||||||||||||||||||||||| || || |||||||||| Sbjct 960 ATGTTTTGTCGGTTTCTATTGGGGGAGGTATTCCCGAGGATTCCGAGGTTGATAAGCTCG 1019 Query 1020 ATTATATCGCGGCTTTTCACGCGGTGGCTAAAGGGATTACGGTTGTGGCTGCTGCGGGTA 1079 ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| Sbjct 1020 ATTATATCGCGGCTTTTCATGCGGTGGCTAAAGGGATTACGGTTGTGACTGCTGCGGGTA 1079 Query 1080 ACGAAGGGCCTGGTGCTCACACTGTTGACAATGTTGCTCCTTGGCTTTTGACTGTTGCTG 1139 ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct 1080 ACGAAGGGCCTGGTGCTCAGACTGTTAACAATGTTGCTCCTTGGCTTTTGACTGTTGCTG 1139 Query 1140 CAACTACTCTTGACCGGTCTTTTCCTACAAAGATCACACTTGGGAATAATCAAACCCTCT 1199 |||| ||||||||||||||||||||||||||||| |||||||||||||| || ||||||| Sbjct 1140 CAACAACTCTTGACCGGTCTTTTCCTACAAAGATTACACTTGGGAATAAACAGACCCTCT 1199 Query 1200 TCGCTGAATCTCTGTTCACTGGACCGGAGATTTCAACCGGTTTAGCTTTCTTGGACTCAG 1259 | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1200 TTGCTGAATCTCTGTTCACGGGACCGGAGATTTCAACCGGTTTAGCTTTCTTGGACTCAG 1259 Query 1260 ACAGTGATGACACTGTTGATGTGAAGGGGAAAACAGTTCTTGTTTTCGATAGTGCAACTC 1319 |||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1260 ACAGTGATGATAATGTTGATGTGAAGGGGAAAACAGTTCTTGTTTTCGATAGTGCCACTC 1319 Query 1320 CAATTGCAGGGAAAGGTGTAGCAGCAGTGATCCTAGCCCAAAAGCCTGATGATCTTCTTT 1379 |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct 1320 CAATTGCAGGGAAAGGTGTAGCAGCATTAATCCTAGCCCAAAAGCCTGATGATCTTCTTT 1379 Query 1380 CTCGATGCAATGGTGT-ACCATGCATTTTTC-CAGATTACGAGTTTGGAACTGAGATTTT 1437 |||||||||||||| | | |||||||||| | | ||||||||| |||||||||||||||| Sbjct 1380 CTCGATGCAATGGT-TCAGCATGCATTTT-CGCTGATTACGAGCTTGGAACTGAGATTTT 1437 Query 1438 AAAATACATACGTACCACCAGATCTCCCACGGTGAGAATTACTGCAGCTACTACACTAAC 1497 ||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||| |||| Sbjct 1438 AAAATACATACGTACCACCAGATCTCCCACGGTGAGAATTAGTGCGGCTACGACATTAAC 1497 Query 1498 TGGTCAGCCTGCAACAACTAAGGTTGCTGCATTCTCATGTAGAGGGCCTAATTCGGTTTC 1557 |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1498 CGGTCAGCCTGCAACGACTAAGGTTGCTGCATTCTCATGTAGAGGGCCTAATTCTGTTTC 1557 Query 1558 ACCAGCCATTCTCAAGCCTGATATAGCAGCTCCGGGTGTGAGCATACTCGCGGCAATAAG 1617 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1558 ACCAGCCATTCTCAAGCCTGATATAGCAGCTCCGGGTGTGAGAATACTCGCGGCAATAAG 1617 Query 1618 TCCGCTTAATCCAGAAGAACAGAACGGATTTGGACTTCTTTCAGGGACATCAATGTCAAC 1677 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1618 TCCGCTTAATCCAGAAGAACAGAACGGATTTGGACTTCTTTCAGGGACATCGATGTCAAC 1677 Query 1678 TCCTGTTGTTTCTGGAATAATAGCTCTCCTAAAATCTCTTCACCCTAAGTGGTCTCCTGC 1737 |||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||| Sbjct 1678 TCCTGTTGTTTCTGGAATCATAGCTCTCCTAAAATCTCTACACCCTAATTGGTCTCCTGC 1737 Query 1738 TGCAGTGAGATCAGCTTTGGTCACAACAGCTTGGAGGACAAGTCCATCTGGAGAACCAAT 1797 |||| |||||||||||||||||||||||| | || |||| | | Sbjct 1738 TGCAATGAGATCAGCTTTGGTCACAACAG-----A--AC----CCAT-T----------T 1775 Query 1798 CTTTGCTGAAGGATCAAACAAGAAGCTTGCAGATCCATTTGACTATGGAGGAGGACTTGT 1857 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1776 -TT-GCTGAAGGATCAAACAAGAAGCTTGCAGATCCATTTGACTATGGAGGAGGACTTGT 1833 Query 1858 AAA-CCCTGAAAAAGCTGCTAAACCAGGACTTGTCTACGATATGGGGATTGTGGATTACA 1916 ||| ||| ||||||||||||||||| || ||||| |||||||||||||| | ||||||| Sbjct 1834 AAATCCC-GAAAAAGCTGCTAAACCCGGTCTTGTATACGATATGGGGATCGACGATTACA 1892 Query 1917 TCAAGTATATGTGTTCTGCGGGTTACAACGACTCTTCAATCTCTCGTGTGCTCGGTAAAA 1976 |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1893 TCAATTATATGTGTTCCGCGGGTTACAACGACTCTTCAATCTCTCGTGTGCTCGGTAAAA 1952 Query 1977 AGACTAATTGCCCAATTCCTAAGCCATCAATGCTTGATATCAACTTACCTTCAATCACAA 2036 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1953 AGACTAAGTGCCCAATTCCTGAGCCATCAATGCTTGATATCAACTTACCTTCAATCACAA 2012 Query 2037 TTCCAAATCTTGAGAAAGAAGTCACACTCACAAGAACTGTAACCAATGTTGGACCCATCA 2096 | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 2013 TCCCAAATCTTGAGAAAGAGGTCACACTCACAAGAACTGTAACCAATGTTGGACCCATCA 2072 Query 2097 AGTCAGTCTATAGAGCTGTGATCGAGTCTCCTCTCGGTATAACTCTCACCGTGAACCCAA 2156 |||||||||| | ||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct 2073 AGTCAGTCTACAAAGCCGTGATCGAGCCTCCTCTCGGTATAACTCTCACCGTGAACCCAA 2132 Query 2157 CCACACTCGTGTTT-AAGTCTGCAGCTAAGAGAGTACTCACTTTCTCGGTTAAGGCTAAA 2215 |||| ||||| ||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct 2133 CCACTCTCGT-TTTCAAATCTGCAGCTAAGAGAGTACTCACTTTCTCGGTTAAGGCTAAA 2191 Query 2216 ACAAGTCACAAAGTCAACACTGGCTACTTCTTTGGAAGCTTAACATGGAGTGATGGTGTT 2275 || ||||| ||||| |||| ||||||||||||||||||||||||||||| |||||||||| Sbjct 2192 ACTAGTCATAAAGTGAACAGTGGCTACTTCTTTGGAAGCTTAACATGGACTGATGGTGTT 2251 Query 2276 CATGATGTTATAATCCCTGTCTCTGTTAAGACAACGAT-TTCGATGTAATAAAAAGAGCC 2334 |||||||||||||||||||||||||||||||| || | ||||||||||| ||||||||| Sbjct 2252 CATGATGTTATAATCCCTGTCTCTGTTAAGACT-CGTTATTCGATGTAATGAAAAGAGCC 2310 Query 2335 ATATGATGCTCATTGTGTTTGTTCTTATGTAATTTGTTGCAAATCTAAG-TCTAAAATGT 2393 ||||||||||||| || |||| ||||||| |||||||||||||||||| ||||| ||| Sbjct 2311 ATATGATGCTCATGGTATTTGCTCTTATGCAATTTGTTGCAAATCTAAACTCTAAG-TGT 2369 Query 2394 CAAATCAAGATTCAAGATCATCATAATAAAAGATCAAATCAC 2435 ||||||||||| ||||||||||||||||||| |||||| ||| Sbjct 2370 CAAATCAAGATCCAAGATCATCATAATAAAAAATCAAACCAC 2411 > Ahg354618 jgi|Araly1|354618|fgenesh1_pg.C_scaffold_7001791 Length=2010 Score = 1834 bits (993), Expect = 0.0 Identities = 1353/1520 (89%), Gaps = 52/1520 (3%) Strand=Plus/Plus Query 815 GTCCGAGGTGGTGCTCCTCGAGCCCGAATAGCCTCGTACAAGG-CGTGTTGGAACGTAAT 873 |||||||||||| | ||||| ||||| |||||||| ||||||| | |||| | | ||| Sbjct 496 GTCCGAGGTGGTTCCCCTCGGGCCCGCATAGCCTCATACAAGGTC-TGTT-G---G-AAT 549 Query 874 GAGAGATGAAGGAGGAGGAACTGATGGAAGATGCACA-TCTGCTGATATGTGGAAGGCTT 932 | || || ||| | ||| | | || ||||||| | |||||||||||||||||||| Sbjct 550 G-TAG-TG--GGA-CACGAA--G--GTAA-ATGCACAGT-TGCTGATATGTGGAAGGCTT 598 Query 933 TTGATGATGCTATACATGATGGGGTTGATGTTTTGTCGGTTTCTATCGGGGGAGGTATTC 992 |||||||||||||||||||| ||| ||||||||||| |||||||| ||||||||||||| Sbjct 599 TTGATGATGCTATACATGATCAGGTAGATGTTTTGTCAGTTTCTATTGGGGGAGGTATTC 658 Query 993 CCGAGGATTCGGAAGTCGATAAGCTC-GATTATATCGCGGCTTTTCACGCGGTGGCTAAA 1051 ||||||| || || |||||||||||| | || ||||||||||||||| |||||||||||| Sbjct 659 CCGAGGAATCCGAGGTCGATAAGCTCAGCTT-TATCGCGGCTTTTCATGCGGTGGCTAAA 717 Query 1052 GGGATTACGGTTGTGGCTGCTGCGGGTAACGAAGGGCCTGGTGCTCACACTGTTGA-CAA 1110 |||||||||||||||||||||||||| |||||||||||||||||||| | |||| | ||| Sbjct 718 GGGATTACGGTTGTGGCTGCTGCGGGGAACGAAGGGCCTGGTGCTCAGAATGTT-ACCAA 776 Query 1111 TGTTGCTCCTTGGCTTTTGACTGTTGCTGCAACTACTCTTGACCGGTCTTTTCCTACAAA 1170 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 777 TGCTGCTCCTTGGCTTTTGACTGTTGCTGCAACTACTCTTGACCGGTCTTTTCCTACAAA 836 Query 1171 GATCACACTTGGGAATAATCAAACCCTCTTCGCTGAATCTCTGTTCACTGGACCGGAGAT 1230 || | |||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| Sbjct 837 AATTATACTTGGGAATAAACAAACCCTCTTTGCTGAATCTCTGTTCACGGGACCGGAGAT 896 Query 1231 TTCAACCGGTTTAGCTTTCTTGGACTCAGACAGTGATGACACTGTTGATGTGAAGGGGAA 1290 |||||| |||||||||||||||||||||||||||||||| | |||| | |||||||||| Sbjct 897 TTCAACGGGTTTAGCTTTCTTGGACTCAGACAGTGATGATAATGTT-A--TGAAGGGGAA 953 Query 1291 AACAGTTCTTGTTTTCGATAGTGC--A----ACTCCAATTGCAGGGAAAGGTGTAGCAGC 1344 |||||||||||||||||||| | | | ||| | ||||||||||||| |||||||| Sbjct 954 AACAGTTCTTGTTTTCGATACTACTTATCCTACTTTATTTGCAGGGAAAGGCGTAGCAGC 1013 Query 1345 AGTGATCCTAGCCCAAAAGCCTGATGATCTTCTTTCTCGATGCAATGGTG-TACCATGCA 1403 ||| ||| |||||||||||||||||||| ||||| |||||| ||| | |||| | || Sbjct 1014 AGTAATCTTAGCCCAAAAGCCTGATGATGTTCTTGCTCGATACAA-CCCGATACCGTACA 1072 Query 1404 TTTTTC-CAGATTACGAGTTTGGAACTGAGATTTTAAAATACATACGTACCACCAGATCT 1462 ||||| ||||||| ||| | |||||||| |||||| ||||||||||||| ||||||||| Sbjct 1073 -TTTTCACAGATTATGAGATCGGAACTGACATTTTACAATACATACGTACTACCAGATCT 1131 Query 1463 CCCACGGTGAGAATTACTGCAGCTACTACACTAACTGGTCAGCCTGCAACAACTAAGGTT 1522 ||||||||||||||| ||| |||| ||| |||| ||||||||||||| ||||||||| Sbjct 1132 CCCACGGTGAGAATTTGTGCTGCTAGGACAATAACCGGTCAGCCTGCAATGACTAAGGTT 1191 Query 1523 GCTGCATTCTCATGTAGAGGGCCTAATTCGGTTTCACCAGCCATTCTC---------AAG 1573 ||||||||||||| |||||||||||||||||| ||||||||||||||| ||| Sbjct 1192 GCTGCATTCTCATCTAGAGGGCCTAATTCGGTGTCACCAGCCATTCTCAAGGTTATAAAG 1251 Query 1574 ---CCTGATATAGCAGCTCCGGGTGTGAGCATACTCGCGGCAATAAGTCCGCTTAATCCA 1630 ||||||||||||||||| ||||| ||||||||||||||| | ||||||||| |||| Sbjct 1252 CCACCTGATATAGCAGCTCCAGGTGTTAGCATACTCGCGGCAGTGAGTCCGCTTGATCCT 1311 Query 1631 GAAGAACAGAACGGATTTGGACTTCTTTCAGGGACATCAATGTCAACTCCTGTTGTTTCT 1690 || | | |||||||||||||||| |||||||||||||||||| ||||||||||||||| Sbjct 1312 GATGCGTACAACGGATTTGGACTTCATTCAGGGACATCAATGTCGACTCCTGTTGTTTCT 1371 Query 1691 GGAATAATAGCTCTCCTAAAATCTCTTCACCCTAAGTGGTCTCCTGCTGCAGTGAGATCA 1750 ||||| ||||||||||| |||||||| |||||||| ||||||||||||||| |||||||| Sbjct 1372 GGAATCATAGCTCTCCTCAAATCTCTACACCCTAATTGGTCTCCTGCTGCAATGAGATCA 1431 Query 1751 GCTTTGGTCACAACAGCTTGGAGGACAAGTCCATCTGGAGAACCAATCTTTGCTGAAGGA 1810 |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct 1432 GCTTTGGTCACAACAGCTTGGAGGACAAGTCCATCTGGAGAACCTATATTTGCTGAAGGG 1491 Query 1811 TCAAACAAGAAGCTTGCAGATCCATTTGACTATGGAGGAGGACTTGTAAA-CCCTGAAAA 1869 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 1492 TCAAACAAGAAGCTTGCAGATCCATTTGACTATGGAGGAGGACTTGTAAATCCC-GAAAA 1550 Query 1870 AGCTGCTAAACCAGGACTTGTCTACGATATGGGGATTGTGGATTACATCAAGTATATGTG 1929 |||||||||||| || ||||| |||||||||||||| | ||||||||||| || ||||| Sbjct 1551 AGCTGCTAAACCCGGTCTTGTATACGATATGGGGATCGACGATTACATCAATTACATGTG 1610 Query 1930 TTCTGCGGGTTACAACGACTCTTCAATCTCTCGTGTGCTCGGTAAAAAGACTAATTGCCC 1989 ||| |||||||| |||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct 1611 TTCCGCGGGTTATAACGACTCCTCAATCTCTCGTGTGCTCGGTAAAAAGACCAATTGCCC 1670 Query 1990 AATTCCTAAGCCATCAATGCTTGATATCAACTTACCTTCAATCACAATTCCAAATCTTGA 2049 ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1671 AATTCCTGGGCCATCAATTCTTGATATCAACTTACCTTCAATCACAATTCCAAATCTTGA 1730 Query 2050 GAAAGAAGTCACACTCACAAGAACTGTAACCAATGTTGGACCCATCAAGTCAGTCTATAG 2109 |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| | Sbjct 1731 GAAAGAGGTCACACTCACAAGGACTGTAACCAATGTTGGACCCATCAAGTCAGTCTACAA 1790 Query 2110 AGCTGTGATCGAGTCTCCTCTCGGTATAACTCTCACCGTGAACCCAACCACACTCGTGTT 2169 ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1791 AGCCGTGATCGAGCCTCCTCTCGGTATAACTCTCACCGTGAACCCAACCACACTCGT-TT 1849 Query 2170 T-AAGTCTGCAGCTAAGAGAGTACTCACTTTCTCGGTTAAGGCTAAAACAAGTCACAAAG 2228 | || |||||||||||||||||||||||||||||||| ||||||||||| ||||| |||| Sbjct 1850 TCAAATCTGCAGCTAAGAGAGTACTCACTTTCTCGGTCAAGGCTAAAACGAGTCATAAAG 1909 Query 2229 TCAACACTGGCTACTTCTTTGGAAGCTTAACATGGAGTGATGGTGTTCATGATGTTATAA 2288 ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct 1910 TCAACGGTGGCTACTTCTTTGGAAGCTTAACATGGACTGATGGTGTTCATGATGTTACAA 1969 Query 2289 TCCCTGTCTCTGTTAAGACA 2308 |||||||||||||||||||| Sbjct 1970 TCCCTGTCTCTGTTAAGACA 1989 Score = 608 bits (329), Expect = 5e-173 Identities = 436/488 (89%), Gaps = 6/488 (1%) Strand=Plus/Plus Query 29 AACTCTTTACAAAGTTCTAAACTTGTGCTTCTATTGGCTATTGCTTTGGTCC-TATTTCT 87 |||||||| | |||||| ||||||||| || | ||||| |||||||||| || ||||||| Sbjct 7 AACTCTTTCCTAAGTTCCAAACTTGTGTTTTTCTTGGCAATTGCTTTGG-CCTTATTTCT 65 Query 88 TAACACGGAGCTGGA-TTTTCTTACAGCTGCTGGAGCCTTAGACAGTGATAGCAAAGTTT 146 ||| || ||||| || |||||||||||||| |||||| ||||||| | | |||||||| Sbjct 66 TAATACAGAGCT-GAGTTTTCTTACAGCTGAACGAGCCTCAGACAGTAACAACAAAGTTT 124 Query 147 ATATAGTGTATCTTGGCGAAAGAGAACACGATGATCCTGAACTTGTCACAGCTTCTCATC 206 ||||||||||| ||||| |||| |||||||||||||| |||||||||||||||||||||| Sbjct 125 ATATAGTGTATATTGGCCAAAGGGAACACGATGATCCAGAACTTGTCACAGCTTCTCATC 184 Query 207 ACCAGATGCTTGAATCACTTCTTCAAAGCAAAGAAGACGCACA-AAACTCCCTGATCTAC 265 | || |||||||||||||||||||||||||||||||||||||| ||| || ||| ||||| Sbjct 185 ATCAAATGCTTGAATCACTTCTTCAAAGCAAAGAAGACGCACATAAA-TCACTGGTCTAC 243 Query 266 AGCTACCAACATGGATTCTCTGGTTTCGCGGCGCTTCTTACATCATCACAAGCTAAGAAA 325 |||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||| Sbjct 244 AGCTACCAACATGGATTCTCTGGTTTCGCGGCGCTTCTTACATCTTCGCAAGCAAAGAAA 303 Query 326 ATTTCAGAGCATCCAGAAGTTATCCATGTTATACCAAACCGGATTCGGAAACTTAAAACC 385 || |||||||||||| ||| ||||||||||||||||||||||||| |||||| |||||| Sbjct 304 ATCTCAGAGCATCCATCAGTAATCCATGTTATACCAAACCGGATTCTGAAACTGAAAACC 363 Query 386 ACAAGAGCTTGGGATCACCTTGGCCTCTCTCCAATTCCAACTTCTTTTTCTTCATTATCA 445 |||||| |||||||||| |||||||||||||||||||| |||||||||||||||| ||| Sbjct 364 ACAAGAACTTGGGATCATCTTGGCCTCTCTCCAATTCCTACTTCTTTTTCTTCATCGTCA 423 Query 446 TCTGTAAAAGGTCTTCTTCATGACACCAACTTGGGCAGTGAAGCTATCATCGGTGTCATT 505 |||| ||||||||| ||||||||||||||| |||| |||||| |||||||||| ||| || Sbjct 424 TCTGCAAAAGGTCTACTTCATGACACCAACATGGGAAGTGAAACTATCATCGGAGTCGTT 483 Query 506 GATTCCGG 513 ||| |||| Sbjct 484 GATACCGG 491 > Ahg354619 jgi|Araly1|354619|fgenesh1_pg.C_scaffold_7001792 Length=1977 Score = 1814 bits (982), Expect = 0.0 Identities = 1272/1408 (90%), Gaps = 36/1408 (3%) Strand=Plus/Plus Query 913 TGCTGATATGTGGAAGGCTTTTGATGATGCTATACATGATGGGGTTGATGTTTTGTCGGT 972 |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| Sbjct 573 TGCTGATATGTGGAAGGCTTTTGATGATGCTATACATGATCAGGTAGATGTTTTGTCGGT 632 Query 973 TTCTATCGGGGGAGGTATTCCCGAGGATTCGGAAGTCGATAAGC-TCGA-TTATATCGCG 1030 |||||| ||| | ||||||||||||||| || |||||||| | |||| || ||||||| Sbjct 633 TTCTATTGGGAGCCATATTCCCGAGGATTCTGAGGTCGATAA-CGTCGACTT-TATCGCG 690 Query 1031 GCTTTTCACGCGGTGGCTAAAGGGATTACGGTTGTGGCTGCTGCGGGTAACGAAGGGCCT 1090 |||||||| |||||||||||||||||||||||||||| ||| ||||| || || |||||| Sbjct 691 GCTTTTCATGCGGTGGCTAAAGGGATTACGGTTGTGGTTGCGGCGGGCAATGATGGGCCT 750 Query 1091 GGTGCTCACACT-GTTGACAATGTTGCTCCTTGGCTTTTGACTGTTGCTGCAACTACTCT 1149 |||||||| ||| ||| ||||| |||||| ||||| |||| |||||||||||||||||| Sbjct 751 GGTGCTCAGACTATTTG-CAATGCTGCTCCATGGCTCTTGAATGTTGCTGCAACTACTCT 809 Query 1150 TGACCGGTCTTTTCCTACAAAGATCACACTTGGGAATAATCAAACCCTCTTCGCTGAATC 1209 ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct 810 TGACCGGTCTTTTCCTACAAAGATCACACTTGGGAATAACCAAACTTTCTTCGCTGAATC 869 Query 1210 TCTGTTCACTGGACCGGAGATTTCAACCGGTTTAGCTTTCTTGGACTCAGACAGTGATGA 1269 | |||| |||||||||||||||||||| |||||||||||||| | | | |||| | Sbjct 870 TTTGTTGACTGGACCGGAGATTTCAACGGGTTTAGCTTTCTT-G-----G--A-TGAT-A 919 Query 1270 CACTGTTGATGTGAAGGGGAAAACAGTTCTTGTTTTCGAT--AG-TGCA-AC-TC--CAA 1322 | |||||||||||||||||||||||||||||||||| || || | || | || ||| Sbjct 920 -A-TGTTGATGTGAAGGGGAAAACAGTTCTTGTTTTCCATAAAGCT-CACCCTTCTTCAA 976 Query 1323 TTGCAGGGAAAGGTGTAGCAGCAGTGATCCTAGCCCAAAAGCCTGATGATCTTCTTTCTC 1382 ||||||||| ||||||||||||||| ||| ||||||| || |||||||||| |||||||| Sbjct 977 TTGCAGGGAGAGGTGTAGCAGCAGTCATCTTAGCCCATAACCCTGATGATCGTCTTTCTC 1036 Query 1383 GATGCAATGGTGTACCATGCATTTTTC-CAGATTACGAGTTTGGAACTGAGATTTTAAAA 1441 || ||| | | | | || ||||| ||||||| ||| |||||||||| |||||| || Sbjct 1037 CATACAA---T-T--CTTACA-TTTTCACAGATTATGAGATTGGAACTGACATTTTACAA 1089 Query 1442 TACATACGTACCACCAGATCTCCCACGGTGAGAATTACTGCAGCTACTACACTAACTGGT 1501 ||||||||||| ||||||||||| ||||||||||||| ||| ||||| ||||| || ||| Sbjct 1090 TACATACGTACTACCAGATCTCCGACGGTGAGAATTAGTGCTGCTACGACACTGACCGGT 1149 Query 1502 CAGCCTGCAACAACTAAGGTTGCTGCATTCTCATGTAGAGGGCCTAATTCGGTTTCACCA 1561 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1150 CAGCCTGCAACGACTAAGGTTGCTGCATTCTCATCTAGAGGGCCTAATTCGGTTTCACCA 1209 Query 1562 GCCATTCTCAAGCCTGATATAGCAGCTCCGGGTGTGAGCATACTCGCGGCAATAAGTCCG 1621 |||||||||||||||||||| |||||||| ||||| | ||||||||||||| | ||| || Sbjct 1210 GCCATTCTCAAGCCTGATATGGCAGCTCCAGGTGTTACCATACTCGCGGCAGTGAGTTCG 1269 Query 1622 CTTAATCCAGAAGAACAGAACGGATTTGGACTTCTTTCAGGGACATCAATGTCAACTCCT 1681 ||| |||| | | | ||||||||||||||||||||||||||||| ||||| |||||| Sbjct 1270 CTTGATCCTTATGCGTACAACGGATTTGGACTTCTTTCAGGGACATCGATGTCGACTCCT 1329 Query 1682 GTTGTTTCTGGAATAATAGCTCTCCTAAAATCTCTTCACCCTAAGTGGTCTCCTGCTGCA 1741 |||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||| Sbjct 1330 GTTGTTTCTGGAATCATAGCTCTCCTAAAATCTCTACACCCTAATTGGTCTCCTGCTGCA 1389 Query 1742 GTGAGATCAGCTTTGGTCACAACAGCTTGGAGGACAAGTCCATCTGGAGAACCAATCTTT 1801 |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct 1390 ATGAGATCAGCTTTGGTCACAACAGCTTGGAGGACAAGTCCATCTGGAGAACCTATATTT 1449 Query 1802 GCTGAAGGATCAAACAAGAAGCTTGCAGATCCATTTGACTATGGAGGAGGACTTGTAAAC 1861 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1450 GCTGAAGGATCAAACAAGAAGCTTGCAGATTCATTTGACTATGGAGGAGGACTTGTAAAC 1509 Query 1862 CCTGAAAAAGCTGCTAAACCAGGACTTGTCTACGATATGGGGATTGTGGATTACATCAAG 1921 |||||||| ||||| ||||| ||||||||||||||||||||||| ||||||||||| Sbjct 1510 CCTGAAAAGGCTGCAAAACCCGGACTTGTCTACGATATGGGGATCAACGATTACATCAAT 1569 Query 1922 TATATGTGTTCTGCGGGTTACAACGACTCTTCAATCTCTCGTGTGCTCGGTAAAAAGACT 1981 || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1570 TACATGTGTTCCGCGGGTTACAACGACTCTTCAATCTCTCGTGTGCTCGGTAAAAAGACT 1629 Query 1982 AATTGCCCAATTCCTAAGCCATCAATGCTTGATATCAACTTACCTTCAATCACAATTCCA 2041 || |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1630 AAGTGCCCAATTCCTGAGCCATCAATGCTTGATATCAACTTACCTTCGATCACAATTCCA 1689 Query 2042 AATCTTGAGAAAGAAGTCACACTCACAAGAACTGTAACCAATGTTGGACCCATCAAGTCA 2101 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1690 AATCTTGAAAAAGAGGTCACACTCACAAGAACTGTAACCAATGTTGGACCCATCAAGTCA 1749 Query 2102 GTCTATAGAGCTGTGATCGAGTCTCCTCTCGGTATAACTCTCACCGTGAACCCAACCACA 2161 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1750 GTCTATAAAGCTGTGGTCGAGTCTCCTCTCGGTATAACTCTCACCGTGAACCCAACCACA 1809 Query 2162 CTCGTGTTTAAGTCTGCAGCTAAGAGAGT-ACTCACTTTCTCGGTTAAGGCTAAAACAAG 2220 ||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||| || Sbjct 1810 CTCGTGTTTAACTCTGCAGCTAAGAGA-TCACTCACTTTCTCGGTTAAGGCTAAAACGAG 1868 Query 2221 TCACAAAGTCAACACTGGCTACTTCTTTGGAAGCTTAACATGGAGTGATGGTGTTCATGA 2280 ||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1869 TCATAAAGTCAACAGTGGCTACTTCTTTGGAAGCTTAACATGGACTGATGGTGTTCATGA 1928 Query 2281 TGTTATAATCCCTGTCTCTGTTAAGACA 2308 ||||| |||||||||||||||||||||| Sbjct 1929 TGTTACAATCCCTGTCTCTGTTAAGACA 1956 Score = 671 bits (363), Expect = 0.0 Identities = 443/482 (92%), Gaps = 4/482 (1%) Strand=Plus/Plus Query 29 AACTCTTTACAAAGTTCTAAACTTGTGCTTCTATTGGCTATTGCTTTGGTCCTATTTCTT 88 |||||||||| |||||| ||||||||| |||| ||||| |||||||||||| |||||||| Sbjct 7 AACTCTTTACTAAGTTCCAAACTTGTGTTTCTCTTGGCAATTGCTTTGGTCTTATTTCTT 66 Query 89 AACACGGAGCTGGA-TTTTCTTACAGCTGCTGGAGCCTTAGACAGTGATAGCAAAGTTTA 147 ||||| ||||| || |||||| ||||||| ||||||| ||||||| | ||||||||||| Sbjct 67 AACACAGAGCT-GAGTTTTCTCACAGCTGAAGGAGCCTCAGACAGTAACAGCAAAGTTTA 125 Query 148 TATAGTGTATCTTGGCGAAAGAGAACACGATGATCCTGAACTTGTCACAGCTTCTCATCA 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 126 TATAGTGTATCTTGGCGAAAGAGAACACGATGATCCTGAACTTGTCACAGCTTCTCATCA 185 Query 208 CCAGATGCTTGAATCACTTCTTCAAAGCAAAGAAGACGCACAAAACTCCCTGATCTACAG 267 || |||||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct 186 TCAAATGCTTGAATCACTTCTTCAAAGCAAAGAAGACGCACATAACTCAATGATCTACAG 245 Query 268 CTACCAACATGGATTCTCTGGTTTCGCGGCGCTTCTTACATCATCACAAGCTAAGAAAAT 327 |||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||| Sbjct 246 CTACCAACATGGATTCTCTGGTTTCGCGGCGCTTCTCACATCTTCACAAGCAAAGAAAAT 305 Query 328 TTCAGAGCATCCAGAAGTTATCCATGTTATACCAAACCGGATTCGGAAACTTAAAACCAC 387 ||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||| Sbjct 306 CTCAGAGCATCCAGAAGTAATCCATGTTATACCAAACCGGATTCTGAAACTGAAAACCAC 365 Query 388 AAGAGCTTGGGATCACCTTGGCCTCTCTCCAATTCCAACTTCTTTTTCTTCATTATCATC 447 |||| |||||||||| ||||||||||||||||| ||||||||||||||||||| |||||| Sbjct 366 AAGAACTTGGGATCATCTTGGCCTCTCTCCAATGCCAACTTCTTTTTCTTCATCATCATC 425 Query 448 TGT-AAAAGGTCTTCTTCATGACACCAACTTGGGCAGTGAAGCTATCATCGGTGTCATTG 506 | | ||||||||| ||||||||||||||| |||| ||||||||||||||||| || ||| Sbjct 426 T-TCAAAAGGTCTACTTCATGACACCAACATGGGAAGTGAAGCTATCATCGGCGTTGTTG 484 Query 507 AT 508 || Sbjct 485 AT 486 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 91911761185 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5