BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT4G32880.1 Length=3023 Score E Sequences producing significant alignments: (Bits) Value Ahg491408 jgi|Araly1|491408|fgenesh2_kg.7__841__AT4G32880.1 4918 0.0 Ahg473277 jgi|Araly1|473277|fgenesh2_kg.1__3231__AT1G30490.1 289 1e-76 Ahg496218 jgi|Araly1|496218|fgenesh2_kg.8__2034__AT5G60690.1 139 1e-31 > Ahg491408 jgi|Araly1|491408|fgenesh2_kg.7__841__AT4G32880.1 Length=3015 Score = 4918 bits (2663), Expect = 0.0 Identities = 2907/3024 (96%), Gaps = 19/3024 (1%) Strand=Plus/Plus Query 9 TCTCTCTCATCCCACTACAAATCTTATATACAAGTTTCGCAAATCTTGACTCTTCACGTT 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 TCTCTCTCATCCCACTACAAATCTTATATACAAGTTTCGCAAATCTTGACTCTTCACGTT 60 Query 69 GTGGATCTATCTAGAGAGATAAGTAAGAGAGAGGAAGAGTAAGGAAGAAAGTGGTTGAAC 128 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 61 GTGGATCTATCTAGAGAGATAAGTAAGAGAGAGGAAGAGTAAGGACGAAAGTGGTTGAAC 120 Query 129 TGTAGCAGAGTCTGAGGTTTGAATCTTGTAGTTCCCATTGAAGCATGCTTCACCGTTTTT 188 |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 121 TGTAGCAGCGTCTGAGGTTTGAATCTTGTAGTTCGCATTGAAGCATGCTTCACCGTTTTT 180 Query 189 TCCGAAGGAAGTTACTCATCCACTGAGAGAGAAAGAGGGATTTGG-A-----GATAGAGA 242 ||||||||||||||||||||||||||||||||||||||||||||| | || ||||| Sbjct 181 TCCGAAGGAAGTTACTCATCCACTGAGAGAGAAAGAGGGATTTGGAACTTTTGAGAGAGA 240 Query 243 AAGAAATTTCTCAGATGGGTTTGTGAGAATTCACAGC-AAGAGCAAGAAACTCCTATATC 301 || |||||||||||||||||||||||||||||||||| || ||||||||||| ||||||| Sbjct 241 AACAAATTTCTCAGATGGGTTTGTGAGAATTCACAGCGAA-AGCAAGAAACTTCTATATC 299 Query 302 TTCCTTTGCTTCCAGAGACCAGCGTGATCAAAAACAAATATTTTTACGG-AAC-AAAATT 359 ||||||||||||||||||||||| |||||| ||||||||| || ||||| | | |||| Sbjct 300 TTCCTTTGCTTCCAGAGACCAGCTTGATCAGAAACAAATA-TTCTACGGTATCTAAAA-C 357 Query 360 AAATAGAGAGATCGGAGAGGATCAAAGATGGGAGGAGGAAGCAATAATAGTCACAATATG 419 ||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||| Sbjct 358 AAATAGAGAGATCAGAGAGGATCAAAGAT--G-GGAGGAAGCAATAATAGTCACAATATT 414 Query 420 GACAACGGGAAGTACGTGAGGTACACTCCTGAACAAGTGGAAGCTCTGGAGAGACTCTAC 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 415 GACAACGGGAAGTACGTGAGGTACACTCCTGAACAAGTGGAAGCTCTGGAGAGACTCTAC 474 Query 480 AATGACTGTCCTAAACCGAGCTCTATGCGCCGCCAACAGCTAATCCGCGAATGTCCTATC 539 ||||||||||||||||||||||||||||||||||| || || ||||| |||||||||||| Sbjct 475 AATGACTGTCCTAAACCGAGCTCTATGCGCCGCCAGCAACTGATCCGGGAATGTCCTATC 534 Query 540 CTCTCCAACATCGAGCCTAAACAGATAAAAGTCTGGTTCCAGAACCGCAGGTGTAGAGAA 599 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 535 CTCTCCAACATCGAGCCTAAACAGATAAAAGTCTGGTTCCAGAACCGCAGGTGTAGAGAA 594 Query 600 AAACAGCGAAAAGAGGCGTCACGACTTCAAGCTGTGAATAGGAAGCTAACGGCAATGAAC 659 |||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||| Sbjct 595 AAACAGCGGAAAGAGGCGTCTCGACTTCAAGCTGTGAATCGGAAGCTAACGGCAATGAAC 654 Query 660 AAGCTTTTGATGGAAGAGAATGACCGCTTGCAAAAGCAAGTGTCTCACTTGGTTTATGAG 719 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 655 AAGCTTTTGATGGAAGAGAATGACCGCTTGCAAAAGCAAGTGTCTCACTTGGTTTACGAG 714 Query 720 AACAGCTATTTTCGCCAACATCCTCAAAACCAGGGGAATTTGGCTACCACAGATACTAGC 779 |||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||| Sbjct 715 AACAGCTATTTTCGCCAACATCCTCAAAACCAGGGGAATTTGGCCACCACGGATAATAGC 774 Query 780 TGTGAGTCAGTGGTGACGAGTGGTCAACACCACTTGACCCCTCAACATCAGCCTCGTGAT 839 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 775 TGTGAGTCAGTGGTGACGAGTGGTCAACACCACTTGACCCCTCAACATCAGCCTCGTGAT 834 Query 840 GCTAGTCCTGCTGGATTATTGTCCATTGCGGATGAAACTTTAACAGAGTTCATTTCCAAG 899 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 835 GCTAGCCCTGCTGGATTATTGTCCATTGCGGATGAAACTTTAACAGAGTTCATTTCTAAG 894 Query 900 GCGACTGGAACCGCTGTCGAGTGGGTCCAAATGCCTGGGATGAAGCCTGGTCCGGATTCC 959 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 895 GCCACTGGAACCGCTGTCGAGTGGGTCCAAATGCCTGGGATGAAGCCTGGTCCGGATTCC 954 Query 960 ATAGGAATCGTTGCTATTTCTCATGGATGCACGGGAATCGCTGCTCGTGCTTGCGGCCTT 1019 ||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||| Sbjct 955 ATAGGAATCGTTGCTATTTCTCACGGATGCACGGGAATCGCAGCCCGTGCTTGCGGCCTT 1014 Query 1020 GTGGGTCTTGATCCCACAAGGGTCGCGGAGATCCTAAAGGATAAGCCTTGTTGGTTGCGT 1079 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1015 GTGGGTCTTGATCCCACAAGGGTCGCGGAGATCCTAAAGGATAAGCCTTGTTGGTTGCGT 1074 Query 1080 GATTGCAGATCTCTGGATATAGTTAACGTACTATCCACTGCAAATGGTGGAACCCTTGAA 1139 |||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct 1075 GATTGCAGATCTCTAGATATTGTTAACGTACTCTCCACTGCAAATGGTGGAACCCTTGAA 1134 Query 1140 CTAATCTACATGCAGCTTTATGCGCCGACAACACTGGCACCAGCTCGTGACTTCTGGATG 1199 ||||||||||||||| |||| |||||||||||| |||| ||||||||||||||||||||| Sbjct 1135 CTAATCTACATGCAGTTTTACGCGCCGACAACATTGGCGCCAGCTCGTGACTTCTGGATG 1194 Query 1200 CTACGTTACACATCTGTAATGGAAGACGGGAGCCTTGTGATATGCGAACGATCACTGAAC 1259 |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct 1195 CTACGTTACACATCTGTAATGGAAGACGGGAGCCTTGTGATATGCGAACGCTCGTTGAAC 1254 Query 1260 AATACACAAAACGGGCCAAGTATGCCTCCGTCTCCTCATTTCGTTAGGGCAGAGATTTTA 1319 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || Sbjct 1255 AATACACAAAACGGGCCAAGTATGCCTCCGTCTCCTCATTTCGTTAGAGCAGAGATTCTA 1314 Query 1320 CCAAGTGGTTACCTCATTAGACCTTGCGAAGGAGGTGGATCCATTCTTCACATTGTCGAT 1379 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct 1315 CCAAGTGGTTACCTCATTAGACCCTGCGAAGGAGGTGGATCCATTCTTCACATTGTTGAT 1374 Query 1380 CATTTCGATCTTGAGCCATGGAGTGTGCCAGAAGTTCTTCGTTCTCTCTATGAGTCCTCC 1439 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| Sbjct 1375 CATTTCGATCTTGAGCCATGGAGTGTGCCCGAAGTTCTTCGTTCTCTCTATGAGTCGTCC 1434 Query 1440 ACTTTACTCGCCCAAAGAACTACAATGGCCGCTCTGCGCTATTTGAGGCAAATATCTCAA 1499 || ||||||||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct 1435 ACGTTACTCGCCCAAAGAACCACCATGGCCGCTCTGCGCTATTTGAGGCAAATATCTCAA 1494 Query 1500 GAGATTTCACAACCTAACGTAACAGGTTGGGGAAGAAGACCAGCGGCTCTTAGAGCACTT 1559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1495 GAGATTTCACAACCTAACGTAACAGGTTGGGGAAGAAGACCAGCGGCTCTTAGAGCACTT 1554 Query 1560 AGCCAAAGGCTTAGCAAAGGATTCAACGAAGCAGTGAATGGGTTCAGCGATGAAGGATGG 1619 ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1555 AGCCAAAGGCTCAGCAAAGGATTCAACGAAGCAGTTAATGGGTTCAGCGATGAAGGATGG 1614 Query 1620 TCCATCCTAGAGAGTGATGGTATCGATGATGTCACTCTTCTTGTGAACTCCTCTCCCACA 1679 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1615 TCCATCCTAGAGAGCGATGGTATCGATGATGTCACTCTTCTTGTGAACTCCTCTCCCACA 1674 Query 1680 AAGATGATGATGACTTCAAGTCTCCCATTTGCCAATGGCTACACTTCTATGCCTAGCGCG 1739 ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||| Sbjct 1675 AAGATGATGATGACTTCAAGTCTTCCATTTGCCAATGGCTTCACTTCTATGCCTAGTGCG 1734 Query 1740 GTCTTATGTGCCAAAGCTTCCATGTTATTACAAAATGTTCCACCTTCGATTCTGCTGCGG 1799 |||||||||||||||||||||||| ||||||||||||||||||| || ||||| |||||| Sbjct 1735 GTCTTATGTGCCAAAGCTTCCATGCTATTACAAAATGTTCCACCCTCAATTCTTCTGCGG 1794 Query 1800 TTCTTGAGGGAACATAGACAAGAATGGGCAGACAATAGCATCGATGCATATTCGGCCGCA 1859 ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct 1795 TTCTTGAGGGAACATAGGCAAGAATGGGCAGACAATAGCATCGATGCATACTCGGCCGCA 1854 Query 1860 GCCATCAAAGCAGGCCCTTGTAGCTTACCAATCCCTCGCCCAGGGAGCTTTGGTGGTCAA 1919 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1855 GCCATCAAAGCAGGCCCTTGTAGCTTACCAATCCCTCGCCCAGGGAGCTTTGGTGGTCAA 1914 Query 1920 GTCATTCTTCCTCTAGCTCACACTATAGAGAATGAAGAGTTTATGGAAGTCATTAAGCTT 1979 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1915 GTCATTCTTCCTCTAGCTCACACTATAGAGAATGAAGAGTTTATGGAAGTGATTAAGCTT 1974 Query 1980 GAGAGCTTGGGGCACTACCAAGAAGACATGATGATGCCTGCTGATATCTTCCTTCTGCAA 2039 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1975 GAGAGCTTGGGGCACTACCAAGAAGACATGATGATGCCTGCTGATATCTTCCTTCTGCAA 2034 Query 2040 ATGTGCAGTGGGGTGGATGAGAACGCAGTTGAATCATGCGCAGAGCTTATATTTGCACCA 2099 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 2035 ATGTGCAGTGGGGTGGATGAGAACGCAGTTGAATCATGCGCAGAGCTTATCTTTGCACCA 2094 Query 2100 ATCGACGCATCTTTCTCTGATGATGCACCAATCATTCCTTCCGGTTTCCGCATCATTCCT 2159 |||||||| ||||||||||||||||| || |||||||||||||| ||||||||||||||| Sbjct 2095 ATCGACGCCTCTTTCTCTGATGATGCCCCCATCATTCCTTCCGGCTTCCGCATCATTCCT 2154 Query 2160 CTAGATTCCAAATCAGAGGGGTTGAGTCCTAACCGAACGCTAGACCTAGCGTCGGCTCTA 2219 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2155 CTAGATTCCAAATCAGAGGGGTTGAGTCCTAACCGAACGCTAGACCTAGCGTCGGCTCTA 2214 Query 2220 GACGTAGGGAGCAGAACAGCCGGAGATTCATGTGGAAGCAGAGGAAACTCAAAGTCCGTT 2279 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 2215 GACGTAGGGAGCAGAACAGCCGGAGATTCATGTGGAAGCAGAGGGAACTCAAAGTCCGTG 2274 Query 2280 ATGACTATAGCGTTTCAGCTAGCTTTTGAGATGCATATGCAAGAGAATGTAGCCTCAATG 2339 |||||||||||||||||||||||||||||||||||||||||||| || ||||| || ||| Sbjct 2275 ATGACTATAGCGTTTCAGCTAGCTTTTGAGATGCATATGCAAGAAAACGTAGCTTCCATG 2334 Query 2340 GCTAGACAGTATGTAAGAAGTGTGATCGCGTCGGTTCAACGGGTCGCACTTGCTCTCTCT 2399 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2335 GCTAGACAATATGTAAGAAGTGTGATCGCGTCGGTTCAACGGGTCGCACTTGCTCTCTCT 2394 Query 2400 CCTTCTTCTCATCAGCTAAGTGGCTTGCGTCCTCCACCCGCGTCACCCGAAGCTCACACT 2459 ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct 2395 CCTTCCTCTCATCAGCTAAGTGGCTTGCGTCCTCCACCCGCGTCACCGGAAGCTCATACC 2454 Query 2460 CTCGCTCGCTGGATCTCTCACTCTTATAGATGTTACCTTGGCGTTGATCTTCTCAAACCT 2519 ||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||| Sbjct 2455 CTCGCTCGCTGGATCTCTCACTCCTATAGATGTTACCTTGGCGTTGATCTCCTTAAACCT 2514 Query 2520 CATGGAACTGATCTTCTCAAGTCTCTTTGGCACCATCCTGACGCTGTCATGTGTTGCTCA 2579 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 2515 CATGGAACCGATCTTCTCAAGTCTCTTTGGCACCATCCTGACGCCGTCATGTGTTGCTCA 2574 Query 2580 CTCAAGGCCTTATCTCCGGTATTCACATTTGCGAACCAAGCTGGTTTAGACATGCTGGAG 2639 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2575 CTCAAGGCCTTAGCGCCGGTATTCACATTTGCGAACCAAGCTGGTTTAGACATGCTGGAG 2634 Query 2640 ACGACGTTGGTGGCACTTCAAGATATCACTCTCGACAAGATCTTCGACAACAACAACGGG 2699 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2635 ACGACGTTGGTGGCACTTCAAGATATCACTCTCGACAAGATCTTCGACAACAACAACGGG 2694 Query 2700 AAGAAGACTTTATCCTCCGAATTCCCTCAGATCATGCAACAGGGGTTTATGTGTATGGAT 2759 ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 2695 AAGAAGACTTTATGCTCCGATTTCCCTCAGATCATGCAACAGGGGTTTATGTGTATGGAT 2754 Query 2760 GGAGGAATATGCATGTCGAGCATGGGAAGAGCAGTAACGTACGAGAAGGCTGTTGGGTGG 2819 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct 2755 GGAGGAATATGCATGTCAAGCATGGGAAGAGCAGTAACGTACGAGAAGGCTGTTGCATGG 2814 Query 2820 AAAGTGTTGAACGACGACGAAGATCCTCATTGTATCTGCTTCATGTTCCTCAACTGGTCT 2879 |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| Sbjct 2815 AAAGTGTTGAACGACGACGAAGATGCTCATTGTATCTCCTTCATGTTCCTCAACTGGTCT 2874 Query 2880 TTTATATGACCTTTTTTCCATGTTTTTCCTTAATTATCAAAACACAGACCtttttttCCG 2939 ||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||| Sbjct 2875 TTTATATGAAATTTTTTCCAAGTTTTTCCTTAATTATCAAAACACAGCCCTTTTTTTCCA 2934 Query 2940 GAGATATATTTATATATACTCTTA-CTCTTAGTTAATTTGTATTTAGTTATATCATCTCT 2998 |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct 2935 GAGATATATTTATATATACTCTTAACTCTTAGTTAATTTGTATTTAGTTAT--CATCTCT 2992 Query 2999 AATTTTGAAAGAATTTACTTACTT 3022 ||||| ||||||||||| |||||| Sbjct 2993 AATTT-GAAAGAATTTATTTACTT 3015 > Ahg473277 jgi|Araly1|473277|fgenesh2_kg.1__3231__AT1G30490.1 Length=2838 Score = 289 bits (156), Expect = 1e-76 Identities = 610/819 (74%), Gaps = 72/819 (9%) Strand=Plus/Plus Query 425 CGGGAAGTACGTGAGGTACACTCCTGAACAAGTGGAAGCTCTGGAGAGACTCTACAATGA 484 ||| |||||||| || ||||| || |||||||| |||||||| |||||| | || ||| Sbjct 244 CGGCAAGTACGTTAGATACACGCCGGAACAAGTTGAAGCTCTTGAGAGAGTTTATGCTGA 303 Query 485 CTGTCCTAAACCGAGCTCTATGC-GCCGCCAACAGCTAATCCGCGAATGTCCTATCCTCT 543 ||||||||||| |||||| | | | | |||||||| || || |||||||| || |||| Sbjct 304 GTGTCCTAAACCTAGCTCTCT-CAGAAGACAACAGCTTATTCGTGAATGTCCGATTCTCT 362 Query 544 CCAACATCGAGCCTAAACAGATAAAAGTCTGGTTCCAGAACCGCAGGTGTAGAGAAAAAC 603 |||||||||||| |||||| ||||| ||||||||||| ||||| ||| |||| || | Sbjct 363 GTAACATCGAGCCTCGACAGATCAAAGTTTGGTTCCAGAATCGCAGATGTCGAGAGAAGC 422 Query 604 AGCGAAAAGAGGC-GTCACGACTTCAAG-CTGTGAATAGGAAGCTAACG-GCAATGAACA 660 || | |||||| | | | || |||| || | ||||| |||||||| | | || ||||||| Sbjct 423 AGAGGAAAGAGTCAG-CTCGTCTTC-AGACAGTGAACAGGAAGCTGA-GTGCCATGAACA 479 Query 661 AGCTTTTGATGGAAGAGAATGACCGCTTGCAAAAGCAAGTGTCTCA-CTTGGTTTATGAG 719 |||||||||||||||||||||| || ||||| |||||||| || || ||||||||||||| Sbjct 480 AGCTTTTGATGGAAGAGAATGATCGTTTGCAGAAGCAAGTCTC-CAACTTGGTTTATGAG 538 Query 720 AACAGCTATTTTCGCCAACATCCTCAAAAC-CAGGGGAATT-TGG--CTACCACAGATA- 774 || | | | | | |||||| || | || | || ||| | |||||||| | Sbjct 539 AATGGGT-TCAT-GA-AACATCG--AATCCACACTGC--TTCTGGGACGACCACAGACAA 591 Query 775 CTAGCTGTGAGTCAGTGGT-GACGAGTGGTCAACA-C--CA-CTTG-ACC-CCTCAACA- 826 | ||||||||||| ||||| | || |||||| || | || | | | || ||||| Sbjct 592 C-AGCTGTGAGTCTGTGGTCGT-GATTGGTCAGCAACGTCAGCA-GCAAAACC-CAACAC 647 Query 827 -TCAGCCTC----G--TGATGCTAGT--CCT-GCTGGATTATTGTC-C-ATTGCGGATGA 874 ||||| || | |||||||| || ||| || || || | |||||||| || Sbjct 648 ATCAGCATCCACAGCGTGATGCTAACAACCCAGCTA-ATC-TTCTCTCGATTGCGGAGGA 705 Query 875 AACTTTAACAGAGTTCATTTCCAAGGCGACTGGAACCGCTGTCGAGTGGGTCCAAATGCC 934 || || | |||||| ||| |||||| || ||||| |||||||| ||||| || ||| Sbjct 706 GACCTTGGCGGAGTTCCTTTGCAAGGCTACAGGAACTGCTGTCGACTGGGTTCAGATGAT 765 Query 935 TGGGATGAAGCCTGGTCCGGATTCCATAGGAATCGTTGCTATTTCTCATGGA--TGCACG 992 |||||||||||||||||||||||| || || ||||| ||| |||| | | | |||| | Sbjct 766 TGGGATGAAGCCTGGTCCGGATTCTATTGGCATCGTAGCTGTTTCAC--GCAACTGCA-G 822 Query 993 -GGAATCGCTGCTCGTGCTTGCGGCCTTGTGGGTCTT-GATCCCAC-AAGGGTCGCGGAG 1049 ||||| || || ||||| |||||||| ||| || || || |||| |||| ||| || Sbjct 823 TGGAATAGCAGCACGTGCCTGCGGCCTCGTGAGT-TTAGAACCCATGAAGG-TCGTTGAA 880 Query 1050 ATCCT-AAAGGATAAG-CCTTGTTGGTTGCGTGATTG-CAGATCTCTGGATA-TAGTTAA 1105 ||||| |||| || | || | |||||| ||||| || | ||| | | || | | | || Sbjct 881 ATCCTCAAAG-ATC-GTCCATCTTGGTTCCGTGACTGTC-GATGTGTCGAGACTC-TGAA 936 Query 1106 CGT-ACTATCC-ACTGCAAATGGTGGAACCCTTGAACTAATCTACA-TGCAGCTTTATGC 1162 || | || || |||| ||||||||| || |||| || || ||| | ||| ||||||| Sbjct 937 TGTTA-TA-CCTACTGGAAATGGTGGTACTATTGAGCTTGTCAACACT-CAGATTTATGC 993 Query 1163 GCCGACAACACTGGCACCAGCTCGTGACTTCTGGATGCT 1201 || |||||| | ||| ||||||||||||| |||| ||| Sbjct 994 TCCTACAACATTAGCAGCAGCTCGTGACTTTTGGACGCT 1032 > Ahg496218 jgi|Araly1|496218|fgenesh2_kg.8__2034__AT5G60690.1 Length=3212 Score = 139 bits (75), Expect = 1e-31 Identities = 190/245 (78%), Gaps = 10/245 (4%) Strand=Plus/Plus Query 842 TAGTCCTGCTGGATT-ATTGTCCATTGCGGATGAAACTTTAACAGAGTTCATTTCCAAGG 900 ||||||||||||||| | | || || || || || ||||| |||||||| | ||||||| Sbjct 1125 TAGTCCTGCTGGATTGA-TCTCAATCGCAGAGGAGACTTTGGCAGAGTTCCTATCCAAGG 1183 Query 901 CGACTGGAACCGCTGTCGAGTGGGTCCAAATGCCTGGGATGAAGCCTGGTCCGGATTCCA 960 | || ||||| ||||| || ||||| || ||||||||||||||||||||||||||||| Sbjct 1184 CTACAGGAACTGCTGTTGATTGGGTTCAGATGCCTGGGATGAAGCCTGGTCCGGATTCGG 1243 Query 961 TAGGAATCGTTGCTATTTCTCATGGATGCACG-GGAATCGCTGCTCGTGCTTGCGGCCTT 1019 | || ||| |||||||||| || |||||| | ||| | || ||||| || || || ||| Sbjct 1244 TTGGCATCTTTGCTATTTCGCAAAGATGCA-GTGGAGTGGCAGCTCGAGCCTGTGGTCTT 1302 Query 1020 GTGGGTCTT-GATCCCAC-AAGGGTCGCGGAGATCCT-AAAGGATAAGCCTTGTTGGTTG 1076 || || || || || | ||| | || |||||||| |||| || ||| | |||||| Sbjct 1303 GTTAGT-TTAGAACCTATGAAGATT-GCAGAGATCCTCAAAG-ATCGGCCATCTTGGTTC 1359 Query 1077 CGTGA 1081 ||||| Sbjct 1360 CGTGA 1364 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 114156464265 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5