BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G34980.1
Length=2649
Score E
Sequences producing significant alignments: (Bits) Value
Ahg491159 jgi|Araly1|491159|fgenesh2_kg.7__592__AT4G34980.1 3733 0.0
Ahg900885 jgi|Araly1|900885|Al_scaffold_0004_1535 998 0.0
Ahg896638 jgi|Araly1|896638|Al_scaffold_0005_604 977 0.0
Ahg939497 jgi|Araly1|939497|scaffold_600041.1 556 2e-157
> Ahg491159 jgi|Araly1|491159|fgenesh2_kg.7__592__AT4G34980.1
Length=2477
Score = 3733 bits (2021), Expect = 0.0
Identities = 2329/2481 (94%), Gaps = 8/2481 (0%)
Strand=Plus/Plus
Query 38 TTTTCCTTTATAATTATGAGAGCACCAATGTCATGTCGGTAAAACTCCCCCCACTCACTT 97
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1 TTTTCCTTTATAATTATGAGAGCACCAATGTCATGTCGGTAAAA----CCCCACTCACTT 56
Query 98 CACTCGCTCCACTCCTTCAATGGCTTCCTCCACCATCGTTCTTCTTCTCTTCCTCTCTTT 157
||||| ||||||| |||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct 57 CACTCCCTCCACTTCTTCAATGGCTTCCTCCATCATCGCTCTTCTTCTCTTCCTCTCTTC 116
Query 158 TCCGTTTATCTCTTTCGCAGCTTCTCAGGCCGCGAAGACTTTCATTTTCCGTATCGATGG 217
|||||| ||||| ||||| ||| ||||| |||||||||||||||||||||||||||||||
Sbjct 117 TCCGTTCATCTCCTTCGCCGCTGCTCAGACCGCGAAGACTTTCATTTTCCGTATCGATGG 176
Query 218 TGGATCTATGCCTTCTATTTTCCCGACGCACTACCATTGGTATAGCACCGAGTTCGCCGA 277
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 177 TGGATCTATGCCTTCTATTTTCCCGACGCACTACCACTGGTACAGCACCGAGTTCGCCGA 236
Query 278 AGAATCTCGAATCGTCCATGTTTACCACACAGTCTTCCATGGTTTCTCCGCCGTTGTTAC 337
||||||||| ||| |||||||||||||||| ||||||||||| ||||||||||| |||||
Sbjct 237 AGAATCTCGCATCCTCCATGTTTACCACACCGTCTTCCATGGATTCTCCGCCGTGGTTAC 296
Query 338 TCCAGATGAAGCAGATAATCTCCGTAACCACCCAGCAGTTCTTGCTGTTTTCGAAGACCG 397
|||||| ||||||||||| ||||||||||||||||| ||||| |||||||||||||||||
Sbjct 297 TCCAGACGAAGCAGATAACCTCCGTAACCACCCAGCGGTTCTCGCTGTTTTCGAAGACCG 356
Query 398 ACGTCGAGAGCTTCACACCACACGTTCTCCTCAATTTCTTGGTTTACAAAACCAAAAAGG 457
||||| ||||||||||| || ||||||||||||||||| ||| ||||||||||||||||
Sbjct 357 GCGTCGTGAGCTTCACACTACTCGTTCTCCTCAATTTCTAGGTCTACAAAACCAAAAAGG 416
Query 458 ACTATGGTCAGAATCTGATTACGGATCAGACGTAATCATTGGCGTTTTTGACACCGGAAT 517
||| ||||||||||||||||||||||||||||||||||||||||| || || ||||||||
Sbjct 417 ACTCTGGTCAGAATCTGATTACGGATCAGACGTAATCATTGGCGTATTCGATACCGGAAT 476
Query 518 TTGGCCGGAGCGGAGGAGTTTCTCAGATCTTAACCTCGGTCCAATTCCAAAAAGGTGGAG 577
||||||||| ||||||||||||||||||| ||||| ||||| ||||||||| |||||||
Sbjct 477 CTGGCCGGAGAGGAGGAGTTTCTCAGATCTCAACCTTGGTCCGATTCCAAAACGGTGGAG 536
Query 578 AGGCGTTTGCGAATCCGGAGCCAGATTCAGTCCTCGGAACTGTAACCGTAAAATTATCGG 637
||||||||| ||||||||||||||||| |||||||||||||||| || ||||| ||||
Sbjct 537 AGGCGTTTGTGAATCCGGAGCCAGATTTGGTCCTCGGAACTGTAATCGGAAAATCGTCGG 596
Query 638 AGCAAGATTCTTCGCTAAGGGACAACAAGCCGCTGTAATCGGAGGAATCAACAAAACCGT 697
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct 597 AGCAAGATTCTTCGCTAAGGGACAACAAGCCGCCGTTATCGGAGGAATCAACAAAACCGT 656
Query 698 TGAGTTTCTATCTCCTCGTGACGCCGATGGACACGGTACTCACACTTCCTCAACCGCCGC 757
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 657 TGAGTTTCTTTCTCCTCGTGACGCCGATGGACACGGTACTCACACTTCCTCAACCGCCGC 716
Query 758 TGGCCGTCACGCTTTT-AAAGCGAGTATGTCCGGTTACGCCTCCGGTGTAGCCAAAGGTG 816
||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 717 TGGCCGTCACG-TTTTCAAGGCGAGTATGTCCGGTTACGCCTCCGGTGTAGCCAAAGGTG 775
Query 817 TTGCTCCAAAAGCTCGTATCGCCGCCTACAAAGTCTGTTGGAAAGATTCCGGTTGTCTCG 876
||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 776 TTGCTCCTAAAGCTCGTATCGCCGCCTACAAAGTCTGTTGGAAAGAATCCGGTTGTCTCG 835
Query 877 ATTCCGATATTCTCGCCGCCTTTGATGCCGCTGTTAGAGACGGTGTCGACGTTATATCGA 936
|||||||||| ||||||||||| |||||||| || ||||| |||||||| || |||||||
Sbjct 836 ATTCCGATATCCTCGCCGCCTTCGATGCCGCCGTCAGAGATGGTGTCGATGTCATATCGA 895
Query 937 TCTCAATCGGTGGTGGAGACGGGATTACTTCGCCGTATTACCTCGATCCAATCGCTATAG 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 896 TCTCAATCGGTGGTGGAGACGGGATTACTTCGCCGTATTACCTCGATCCAATCGCTATAG 955
Query 997 GCTCGTACGGCGCCGCGTCGAAAGGAATCTTCGTCTCTTCCTCTGCCGGAAACGAAGGAC 1056
|||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 956 GCTCATACGGAGCCGCGTCGAAAGGAATCTTCGTCTCTTCCTCCGCCGGAAACGAAGGAC 1015
Query 1057 CTAACGGTATGTCAGTTACGAACCTCGCGCCGTGGGTAACCACCGTTGGTGCTAGTACAA 1116
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1016 CTAACGGTATGTCAGTTACAAACCTCGCGCCGTGGGTAACCACCGTTGGTGCTAGTACAA 1075
Query 1117 TCGATCGGAATTTCCCAGCGGATGCTATTCTCGGCGACGGACATCGTCTCAGAGGAGTGT 1176
|||||||||||||||| |||||||| |||||||| |||||||||||||||||||| ||||
Sbjct 1076 TCGATCGGAATTTCCCCGCGGATGCAATTCTCGGTGACGGACATCGTCTCAGAGGCGTGT 1135
Query 1177 CTCTTTACGCTGGAGTACCTTTAAACGGTCGTATGTTTCCGGTGGTTTATCCCGGTAAAT 1236
|||| ||||| ||||| || ||||||||||||||||||||||||||||||||||| ||||
Sbjct 1136 CTCTCTACGCCGGAGTTCCGTTAAACGGTCGTATGTTTCCGGTGGTTTATCCCGGCAAAT 1195
Query 1237 CGGGAATGTCATCAGCGTCTCTATGTATGGAGAACACGCTTGATCCGAAGCAAGTGAGGG 1296
| ||||||||||| |||||||||||||||||||| ||||| ||||| ||||| |||||||
Sbjct 1196 CAGGAATGTCATCGGCGTCTCTATGTATGGAGAATACGCTCGATCCCAAGCATGTGAGGG 1255
Query 1297 GTAAAATAGTAATCTGCGATAGAGGAAGCAGTCCACGCGTAGCCAAAGGATTGGTTGTGA 1356
|||| || ||||| || |||||||||||||||||||| ||||| || |||||||||||||
Sbjct 1256 GTAAGATTGTAATTTGTGATAGAGGAAGCAGTCCACGTGTAGCGAAGGGATTGGTTGTGA 1315
Query 1357 AGAAAGCAGGTGGTGTCGGAATGATTCTCGCTAATGGAGCATCTAACGGTGAAGGATTAG 1416
|||||||||| || |||||||||||||||||||| || ||||| ||||||||||||||||
Sbjct 1316 AGAAAGCAGGCGGCGTCGGAATGATTCTCGCTAACGGCGCATCCAACGGTGAAGGATTAG 1375
Query 1417 TCGGAGATGCTCATCTTATTCCAGCCTGTGCCGTTGGATCAAACGAAGGAGATAGAATCA 1476
||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||
Sbjct 1376 TCGGAGATGCTCATCTTATCCCAGCCTGCGCCGTTGGGTCAAACGAAGGAGATAGAATCA 1435
Query 1477 AAGCATATGCTTCTTCACATCCGAATCCAATTGCTTCAATTGATTTCAGAGGAACTATAG 1536
|||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1436 AAGCTTATGCTTCTTCACATCCGAATCCAATTGCTTCAATCGATTTCAGAGGAACTATAG 1495
Query 1537 TTGGGATTAAACCGGCTCCGGTTATTGCTTCTTTCTCCGGTAGAGGACCAAACGGTTTAA 1596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1496 TTGGGATTAAACCGGCTCCGGTTATTGCTTCTTTCTCCGGTAGAGGACCAAACGGTTTAA 1555
Query 1597 GCCCGGAGATTCTTAAACCGGATTTGATTGCTCCCGGAGTTAACATCCTCGCCGCATGGA 1656
| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1556 GTCCGGAGATTCTTAAACCGGATTTGATTGCTCCCGGAGTTAACATCCTCGCCGCGTGGA 1615
Query 1657 CAGACGCTGTTGGACCTACAGGTTTGCCGTCAGATCCAAGGAAAACGGAATTCAACATTC 1716
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1616 CCGACGCTGTTGGACCTACAGGTTTGCCGTCAGATCCAAGGAAAACGGAATTCAACATTC 1675
Query 1717 TCTCCGGTACTTCAATGGCATGTCCTCACGTTAGTGGTGCGGCGGCGCTTCTCAAATCCG 1776
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1676 TCTCCGGTACTTCAATGGCGTGTCCTCACGTTAGTGGTGCGGCGGCGCTTCTCAAATCCG 1735
Query 1777 CTCATCCAGATTGGAGCCCTGCCGTGATACGATCGGCAATGATGACAACGACTAACCTCG 1836
||||||| ||||||||||| |||| ||| |||||||||||||||| |||||||||||||
Sbjct 1736 CTCATCCGGATTGGAGCCCCGCCGCAATAAGATCGGCAATGATGACGACGACTAACCTCG 1795
Query 1837 TCGATAACTCTAACCGCTCGTTGATCGATGAATCCACCGGGAAATCGGCTACGCCTTATG 1896
|||||||||||||||| |||||||| |||||||||||||| ||||| |||||||||||||
Sbjct 1796 TCGATAACTCTAACCGTTCGTTGATTGATGAATCCACCGGAAAATCAGCTACGCCTTATG 1855
Query 1897 ATTACGGGTCGGGTCATTTAAATTTGGGCCGGGCTATGAATCCGGGTCTTGTCTACGATA 1956
|||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||
Sbjct 1856 ATTACGGGTCGGGTCATTTAAATTTGGGTCGGGCTATGGATCCGGGTCTTGTTTACGATA 1915
Query 1957 TAACTAATGATGATTACATTACGTTTCTTTGCTCCATCGGGTACGGACCAAAGACGATCC 2016
|||| || ||||||||||||||||||||||||||||||||||| || || |||||||| |
Sbjct 1916 TAACCAACGATGATTACATTACGTTTCTTTGCTCCATCGGGTATGGGCCTAAGACGATTC 1975
Query 2017 AAGTGATAACAAGAACACCGGTGAGATGTCCGACGACCAGGAAACCGTCTCCCGGGAATT 2076
||||||| |||||||| ||||||||||||||||||| ||||||||||| || |||||||
Sbjct 1976 AAGTGATTACAAGAACGCCGGTGAGATGTCCGACGAGGAGGAAACCGTCGCCGGGGAATT 2035
Query 2077 TGAATTATCCTTCGATCACGGCGGTGTTTCCTAC-TAATAGAAGAGGATTGGTGAGTAAA 2135
|||||||||||||||||||||||||||||||||| | || ||||||||||||||| |||
Sbjct 2036 TGAATTATCCTTCGATCACGGCGGTGTTTCCTACCTC-TACAAGAGGATTGGTGAGCAAA 2094
Query 2136 ACTGTTATAAGGACGGCGACGAATGTCGGGCAGGCTGAGGCGGTTTATCGGGCGAGGATA 2195
||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||| ||
Sbjct 2095 ACTGTTATACGGACGGCGACAAATGTCGGGCAGGCGGAGGCGGTTTATCGGGCGAGGTTA 2154
Query 2196 GAGTCGCCGAGAGGAGTGACGGTGACAGTGAAACCACCTAGGCTTGTGTTTACTTCGGCC 2255
|||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||
Sbjct 2155 GAGTCGCCGAGAGGAGTGACGGTGACGGTGAAACCGCCAAGGCTTGTGTTTACTTCGGCC 2214
Query 2256 GTTAAGAGACGGAGCTATGCGGTTACAGTGACGGTTAATACAAGGAATGTTGTGTTGGGA 2315
|||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct 2215 GTTAAGAGACGGAGCTATGCGGTTACGGTGACGGTTGATACAAGGAATGTTGTGTTGGGA 2274
Query 2316 GAAACAGGTGCTGTGTTTGGGTCAGTCACGTGGTTTGATGGTGGGAAACACGTGGTTCGG 2375
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2275 GAAACAGGTGCTGCGTTTGGGTCGGTCACGTGGTTTGATGGTGGGAAACACGTGGTTCGG 2334
Query 2376 AGCCCCATCGTGGTGACCCAAATGGATACGTTGTGATTCCGGGTCGGGTTTGGGATGATC 2435
||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2335 AGCCCTGTTGTGGTGACCCAAATGGATACGTTGTGATTCCGGGTCGGGTTTTGGATGATC 2394
Query 2436 ATGCGGTCATGACTCATGATCGTAAACCCTTTATGTGGTGTAGCAATAACTGTAGAATTT 2495
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2395 GTGCGGTCATGACTCATGATCGTAAACCCTTTATGAGGTGTAGCAATAACTGTAGAATTT 2454
Query 2496 TGAGTTAGTTGGCTTTTATTT 2516
||||||||| ||||||| |||
Sbjct 2455 TGAGTTAGTGGGCTTTTTTTT 2475
> Ahg900885 jgi|Araly1|900885|Al_scaffold_0004_1535
Length=702
Score = 998 bits (540), Expect = 0.0
Identities = 653/707 (92%), Gaps = 10/707 (1%)
Strand=Plus/Plus
Query 489 GTAATCATTGGCGTTTTTGACACCGGAATTTGGCCGGAGCGGAGGAGTTTCTCAGATCTT 548
|||||||||||||| || || |||||||| ||||| ||| |||||||||||||| ||||
Sbjct 1 GTAATCATTGGCGTATTCGATACCGGAATCTGGCCAGAGAGGAGGAGTTTCTCATATCTC 60
Query 549 AACCTCGGTCCAATTCCAAAAAGGTGGAGAGGCGTTTGCGAATCCGGAGCCAGATTCAGT 608
||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||| ||
Sbjct 61 AACCTCGGTCCAATTCCAAAACGGTGGAGAGGTGTTTGCGAATCCGGAGCAAGATTTGGT 120
Query 609 CCTCGGAACTGTAACCGTAAAATTATCGGAGCAAGATTCTTCGCT-AAGGGACAACAAGC 667
||| ||||||||||||| ||||| |||||||||||||||||||| ||||| |||||||
Sbjct 121 CCTTGGAACTGTAACCGAAAAATCGTCGGAGCAAGATTCTTCGCTAAAGGG-CAACAAGA 179
Query 668 CGCTGTAATCGGAGGAATCAACAAAACCGTTGAGTTTCTATCTCCTCGTGACGCCGATGG 727
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 180 CGCCGTAATCGGAGGAATCAACAAAACCGTTGAGTTTCTATCTCCTCGTGACGCCGATGG 239
Query 728 ACACGGTACTCACACTTCCTCAACCGCCGCTGGCCGTCACGCTTTTAAAGCGAGTATGTC 787
|||||||||||||||||||||||||| || | |||| ||||| ||||||||||||||
Sbjct 240 ACACGGTACTCACACTTCCTCAACCG--GC---C-GTCATGCTTTCAAAGCGAGTATGTC 293
Query 788 CGGTTACGCCTCCGGTGTAGCCAAAGGTGTTGCTCCAAAAGCTCGTATCGCCGCCTACAA 847
|||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||
Sbjct 294 CGGTTACGCCTCCGGTGTAGCCAAAGGTGTTGCTCCTAAAGCACGTATCGCCACCTACAA 353
Query 848 AGTCTGTTGGAAAGATTCCGGTTGTCTCGATTCCGATATTCTCGCCGCCTTTGATGCCGC 907
||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||| ||
Sbjct 354 AGTCTGTTGGAAAGAATCCGGTTGTCTCGATTCCGATATCCTCGCCGCTTTTGATGCGGC 413
Query 908 T-GTTAGAGACGGTGTCGACGTTATATCGATCTCAATCGGTGGTGGAGACGGGATTACTT 966
| || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 414 TAGT-AGAGACGGCGTCGACGTTATATCGATCTCAATCGGTGGTGGTGACGGGATTACTT 472
Query 967 CGCCGTATTACCTCGATCCAATCGCTATAGGCTCGTACGGCGCCGCGTCGAAAGGAATCT 1026
| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 473 CTCCGTATTACCTCGATCCAATCGCTATAGGCTCATACGGCGCCGCGTCGAAAGGAATCT 532
Query 1027 TCGTCTCTTCCTCTGCCGGAAACGAAGGACCTAACGGTATGTCAGTTACGAACCTCGCGC 1086
||| ||||| || ||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 533 CCGTTTCTTCTTCCGCCGGAAACGAAGGACCTAACGGTATGTCAGTTACAAACCTCGCAC 592
Query 1087 CGTGGGTAACCACCGTTGGTGCTAGTACAATCGATCGGAATTTCCCAGCGGATGCTATTC 1146
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct 593 CGTGGGTAACCACCGTTGGTGCTAGTACAATCGATCGGAATTTCCCGGCGGATGCAATTC 652
Query 1147 TCGGCGACGGACATCGTCTCAGAGGAGTGTCTCTTTACGCTGGAGTA 1193
|||| |||||||||||||||||||| |||||||| ||||| ||||||
Sbjct 653 TCGGTGACGGACATCGTCTCAGAGGCGTGTCTCTCTACGCCGGAGTA 699
> Ahg896638 jgi|Araly1|896638|Al_scaffold_0005_604
Length=699
Score = 977 bits (529), Expect = 0.0
Identities = 650/707 (92%), Gaps = 13/707 (2%)
Strand=Plus/Plus
Query 489 GTAATCATTGGCGTTTTTGACACCGGAATTTGGCCGGAGCGGAGGAGTTTCTCAGATCTT 548
|||||||||||||| || || |||||||| ||||| || ||||||||| ||| ||||
Sbjct 4 GTAATCATTGGCGTATTCGATACCGGAATCTGGCC--AG-AGAGGAGTTTTTCATATCTC 60
Query 549 AACCTCGGTCCAATTCCAAAAAGGTGGAGAGGCGTTTGCGAATCCGGAGCCAGATTCAGT 608
||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||| ||
Sbjct 61 AACCTCGGTCCAATTCCAAAACGGTGGAGAGGTGTTTGTGAATCCGGAGCCAGATTTGGT 120
Query 609 CCTCGGAACTGTAACCGTAAAATTATCGGAGCAAGATTCTTCGCT-AAGGGACAACAAGC 667
||||||||||||||||| ||||| |||||||||||||||||||| ||||| |||||||
Sbjct 121 CCTCGGAACTGTAACCGAAAAATCGTCGGAGCAAGATTCTTCGCTAAAGGG-CAACAAGA 179
Query 668 CGCTGTAATCGGAGGAATCAACAAAACCGTTGAGTTTCTATCTCCTCGTGACGCCGATGG 727
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 180 CGCCGTAATCGGAGGAATCAACAAAACCGTTGAGTTTCTATCTCCTCGTGACGCCGATGG 239
Query 728 ACACGGTACTCACACTTCCTCAACCGCCGCTGGCCGTCACGCTTTTAAAGCGAGTATGTC 787
|||||||||||||||||||||||||| || | |||| ||||| ||||||||||||||
Sbjct 240 ACACGGTACTCACACTTCCTCAACCG--GC---C-GTCATGCTTTCAAAGCGAGTATGTC 293
Query 788 CGGTTACGCCTCCGGTGTAGCCAAAGGTGTTGCTCCAAAAGCTCGTATCGCCGCCTACAA 847
|||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||
Sbjct 294 CGGTTACGCCTCCGGTGTAGCCAAAGGTGTTGCTCCTAAAGCACGTATCGCCACCTACAA 353
Query 848 AGTCTGTTGGAAAGATTCCGGTTGTCTCGATTCCGATATTCTCGCCGCCTTTGATGCCGC 907
||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||| ||
Sbjct 354 AGTCTGTTGGAAAGAATCCGGTTGTCTCGATTCCGATATCCTCGCCGCTTTTGATGCGGC 413
Query 908 T-GTTAGAGACGGTGTCGACGTTATATCGATCTCAATCGGTGGTGGAGACGGGATTACTT 966
| || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 414 TAGT-AGAGACGGCGTCGACGTTATATCGATCTCAATCGGTGGTGGTGACGGGATTACTT 472
Query 967 CGCCGTATTACCTCGATCCAATCGCTATAGGCTCGTACGGCGCCGCGTCGAAAGGAATCT 1026
| |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct 473 CTCCGTATTACCTCGATCCAATCGCTATAGGCTCATACGGTGCCGCGTCGAAAGGAATCT 532
Query 1027 TCGTCTCTTCCTCTGCCGGAAACGAAGGACCTAACGGTATGTCAGTTACGAACCTCGCGC 1086
||| ||||| || ||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 533 CCGTTTCTTCTTCCGCCGGAAACGAAGGACCTAACGGTATGTCAGTTACAAACCTCGCAC 592
Query 1087 CGTGGGTAACCACCGTTGGTGCTAGTACAATCGATCGGAATTTCCCAGCGGATGCTATTC 1146
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct 593 CGTGGGTAACCACCGTTGGTGCTAGTACAATCGATCGGAATTTCCCGGCGGATGCAATTC 652
Query 1147 TCGGCGACGGACATCGTCTCAGAGGAGTGTCTCTTTACGCTGGAGTA 1193
|||| |||||||||||||||||||| |||||||| ||||| ||||||
Sbjct 653 TCGGTGACGGACATCGTCTCAGAGGCGTGTCTCTCTACGCCGGAGTA 699
> Ahg939497 jgi|Araly1|939497|scaffold_600041.1
Length=463
Score = 556 bits (301), Expect = 2e-157
Identities = 396/439 (90%), Gaps = 17/439 (4%)
Strand=Plus/Plus
Query 763 GTCACGCTTTTAAAGCGAGTATGTCCGGTTACGCCTCCGGTGTAGCCAAAGGTGTTGCTC 822
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GTCATGCTTTCAAAGCGAGTATGTCCGGTTACGCCTCCGGTGTAGCCAAAGGTGTTGCTC 60
Query 823 CAAAAGCTCGTATCGCCGCCTACAAAGTCTGTTGGAAAGATTCCGGTTGTCTCGATTCCG 882
| ||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||
Sbjct 61 CTAAAGCACGTATCGCCACCTACAAAGTCTGTTGGAAAGAATCCGGTTGTCTCGATTCCG 120
Query 883 ATATTCTCGCCGCCTTTGATGCCGCT-GTTAGAGACGGTGTCGACGTTATATCGATCTCA 941
|||| |||||||| |||||||| ||| || |||||||| |||||||||||||||||||||
Sbjct 121 ATATCCTCGCCGCTTTTGATGCGGCTAGT-AGAGACGGCGTCGACGTTATATCGATCTCA 179
Query 942 ATCGGTGGTGGAGACGGGATTACTTCGCCGTATTACCTCGATCCAATCGCTATAGGCTCG 1001
||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 180 ATCGGTGGTGGTGACGGGATTACTTCTCCGTATTACCTCGATCCAATCGCTATAGGCTCA 239
Query 1002 TACGGCGCCGCGTCGAAAGGAATCTTCGTCTCTTCCTCTGCCGGAAACGAAGGACCTAAC 1061
||||||||||||||||||||||||| ||| ||||| || ||||||||||||||||||| |
Sbjct 240 TACGGCGCCGCGTCGAAAGGAATCTCCGTTTCTTCTTCCGCCGGAAACGAAGGACCTA-C 298
Query 1062 GGTATGTCAGTTACGAACCTCGCGCCGTGGGTAACCACCGTTGGTGCTAGTACAATCGAT 1121
| | || | |||| ||||||||||||||||||||||||||||||||||||
Sbjct 299 ---A----A---AC---C-TCGCACCGTGGGTAACCACCGTTGGTGCTAGTACAATCGAT 344
Query 1122 CGGAATTTCCCAGCGGATGCTATTCTCGGCGACGGACATCGTCTCAGAGGAGTGTCTCTT 1181
||||||||||| |||||||| |||||||| |||||||||||||||||||| ||||||||
Sbjct 345 CGGAATTTCCCGGCGGATGCAATTCTCGGTGACGGACATCGTCTCAGAGGCGTGTCTCTC 404
Query 1182 TACGCTGGAGTACCTTTAA 1200
||||| ||||| || ||||
Sbjct 405 TACGCCGGAGTTCCGTTAA 423
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 99910712635
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5