BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT4G35090.1 Length=1930 Score E Sequences producing significant alignments: (Bits) Value Ahg491144 jgi|Araly1|491144|fgenesh2_kg.7__577__AT4G35090.1 2841 0.0 Ahg312977 jgi|Araly1|312977|fgenesh1_pm.C_scaffold_1001757 1110 0.0 > Ahg491144 jgi|Araly1|491144|fgenesh2_kg.7__577__AT4G35090.1 Length=1919 Score = 2841 bits (1538), Expect = 0.0 Identities = 1785/1899 (94%), Gaps = 38/1899 (2%) Strand=Plus/Plus Query 53 CATCTCCTCG-TTTTGATAAA-AATCTCTGAATCTCTCCAAGCTCTCTTCTCATCAAACC 110 |||||||||| |||||||||| ||||||||||||||||| ||||||||||||| ||| Sbjct 35 CATCTCCTCGTTTTTGATAAACTCTCTCTGAATCTCTCCAAACTCTCTTCTCATC-AACT 93 Query 111 ATGGATCCTTACAAGTATCGTCCAGCTAGTTCTTACAACTCTCCCTTCTTCACCACCAAC 170 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 94 ATGGATCCTTACAAGTATCGTCCAGCTAGTTCTTACAACTCTCCCTTCTTCACCACCAAC 153 Query 171 TCTGGTGCTCCTGTATGGAACAACAACTCCTCCATGACCGTTGGACCCAGAGGTCCTATC 230 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 154 TCTGGTGCTCCTGTATGGAACAACAACTCCTCCATGACCGTTGGACCCAGAGGTCCTATC 213 Query 231 CTTCTTGAGGATTACCATCTCGTTGAGAAGCTTGCCAATTTCGACAGGGAACGGATTCCA 290 ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 214 CTTCTTGAGGACTATCATCTGGTTGAGAAGCTTGCCAATTTCGACAGGGAACGGATTCCA 273 Query 291 GAGCGTGTGGTTCATGCCAGAGGAGCCAGTGCTAAAGGTTTCTTTGAGGTCACTCATGAT 350 |||||||| ||||||||||| ||||| |||||||||||||| |||||||||||||||||| Sbjct 274 GAGCGTGTCGTTCATGCCAGGGGAGCTAGTGCTAAAGGTTTTTTTGAGGTCACTCATGAT 333 Query 351 ATCTCTAACCTCACTTGTGCTGACTTTCTCCGAGCTCCCGGTGTTCAGACTCCTGTCATT 410 || |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct 334 ATATCTAACCTCACTTGTGCTGATTTTCTCCGAGCTCCTGGTGTTCAGACTCCTGTCATT 393 Query 411 GTCCGGTTCTCCACCGTTATCCATGAGCGTGGAAGTCCCGAGACCTTGAGAGACCCTCGT 470 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 394 GTGCGGTTCTCCACCGTTATCCATGAGCGTGGAAGTCCCGAGACCTTGAGAGACCCTCGT 453 Query 471 GGTTTTGCAGTCAAGTTCTACACCAGAGAGGGGAACTTTGATCTTGTTGGAAACAACTTT 530 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 454 GGTTTTGCAGTCAAGTTCTACACCAGAGAGGGAAACTTTGATCTTGTTGGAAACAACTTT 513 Query 531 CCTGTTTTCTTCATCCGCGATGGGATGAAGTTCCCTGACATGGTCCACGCTCTTAAGCCG 590 || ||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct 514 CCGGTTTTTTTCATCCGCGATGGGATGAAGTTCCCTGACATGGTTCACGCCCTTAAGCCG 573 Query 591 AACCCAAAATCTCACATCCAAGAGAACTGGAGAATCCTTGACTTCTTCTCCCACCACCCT 650 ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 574 AACCCGAAATCTCACATCCAGGAGAACTGGAGAATCCTTGACTTCTTCTCCCACCACCCT 633 Query 651 GAAAGTTTGAACATGTTCACTTTCCTCTTCGATGATATCGGTATCCCACAAGATTACAGG 710 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 634 GAAAGTTTGAACATGTTCACTTTCCTCTTCGATGATATCGGTATCCCACAAGATTACAGG 693 Query 711 CACATGGATGGTTCAGGTGTCAATACATACATGTTGATCAACAAAGCTGGCAAAGCTCAC 770 |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 694 CACATGGACGGTTCAGGTGTCAACACATACATGTTGATCAACAAAGCTGGCAAAGCTCAC 753 Query 771 TACGTGAAGTTCCATTGGAAACCAACTTGTGGAGTCAAGTCTCTTTTGGAAGAAGATGCA 830 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 754 TACGTGAAGTTCCACTGGAAACCAACTTGTGGAGTCAAGTCTCTTTTGGAAGAAGATGCG 813 Query 831 ATTCGTGTTGGAGGAACCAACCACAGTCATGCGACTCAAGACTTGTATGACTCTATAGCT 890 ||||||||||||||||||||||||||||| |||||||| |||||||||||||| || ||| Sbjct 814 ATTCGTGTTGGAGGAACCAACCACAGTCACGCGACTCAGGACTTGTATGACTCAATTGCT 873 Query 891 GCTGGAAACTACCCTGAATGGAAGCTCTTTATCCAAATCATTGATCCTGCTGATGAAGAC 950 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 874 GCTGGAAACTACCCTGAATGGAAGCTCTTTATCCAAATCATTGATCCAGCTGATGAAGAC 933 Query 951 AAGTTCGACTTTGACCCGCTCGATGTGACCAAGACCTGGCCTGAGGATATCTTGCCTCTT 1010 |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct 934 AAGTTCGACTTTGACCCGCTCGATGTGACCAAGACCTGGCCTGAAGATATCTTACCTCTC 993 Query 1011 CAACCTGTTGGACGTATGGTGTTGAACAAGAACATTGACAACTTCTTTGCAGAGAATGAG 1070 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 994 CAACCTGTTGGTCGTATGGTGTTGAACAAGAACATTGACAACTTCTTTGCAGAGAATGAG 1053 Query 1071 CAACTTGCTTTCTGTCCTGCAATTATTGT-CCCAGGGATACATTACTCAGATGATAAGCT 1129 |||||||| ||||| |||||||| ||||| ||| |||||||| |||||||| || ||||| Sbjct 1054 CAACTTGCCTTCTGCCCTGCAATCATTGTTCCC-GGGATACACTACTCAGACGACAAGCT 1112 Query 1130 GCTTCAAACCCGTGTCTTCTCCTATGCCGATACTCAGAGACACCGTCTTGGACCAAACTA 1189 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1113 GCTTCAAACCCGTGTCTTCTCCTATGCCGACACTCAGAGACACCGTCTTGGACCAAACTA 1172 Query 1190 CCTTCAGCTGCCAGTCAATGCTCCAAAATGTGCTCACCACAACAACCACCATGAGGGATT 1249 ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1173 CCTTCAGCTACCAGTCAATGCCCCAAAATGTGCTCACCACAACAACCACCATGAGGGATT 1232 Query 1250 CATGAATTTCATGCACAGGGACGAGGAGGTTAACTACTTCCCGTCGAGGTATGACCAGGT 1309 |||||||||||||||||||||||||||||| || |||||||| || |||||||||||||| Sbjct 1233 CATGAATTTCATGCACAGGGACGAGGAGGTCAATTACTTCCCATCAAGGTATGACCAGGT 1292 Query 1310 TCGTCATGCTGAGAAGTATCCAACTCCGCCTGCTGTCTGTTCTGGAAAACGTGAGAGGTG 1369 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1293 TCGTCATGCTGAGAAGTATCCAACTCCGCCTGCTGTCTGCTCTGGAAAACGTGAGAGGTG 1352 Query 1370 CATTATTGAGAAAGAGAACAACTTCAAGGAGCCTGGAGAGAGATACCGTACCTTTACACC 1429 ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 1353 CATTATTGAGAAAGAGAACAACTTCAAGGAGCCTGGAGAGAGATACCGTTCATTTACACC 1412 Query 1430 AGAGAGGCAAGAACGATTCATCCAGAGATGGATTGATGCCCTATCCGACCCACGCATCAC 1489 ||||||||||||||| |||||||||||||||||||| ||| |||||||||| |||||||| Sbjct 1413 AGAGAGGCAAGAACGCTTCATCCAGAGATGGATTGAAGCCTTATCCGACCCTCGCATCAC 1472 Query 1490 GCATGAAATCCGCAGTATCTGGATCTCTTACTGGTCTCAGGCTGATAAGTCTTTGGGACA 1549 ||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||| Sbjct 1473 GCATGAAATCCGCAGCATCTGGATCTCTTACTGGTCTCAGGCTGACAAGTCTCTGGGACA 1532 Query 1550 GAAGCTGGCAAGCCGTCTGAACGTGAGACCAAGCATCTAAAACGAGTG-----A---AA- 1600 |||||||||||||||||| ||||||||||||||||||||||| ||||| | || Sbjct 1533 GAAGCTGGCAAGCCGTCTCAACGTGAGACCAAGCATCTAAAATGAGTGTTGCTAGTGAAA 1592 Query 1601 GAA-TTCTTGATTGGCCTTTCTGTGGTTGTTAATTAGCAGAGAA-AA-GAAAATGGGAAG 1657 ||| |||||||||||||||| ||||||| | ||||||||||||| || ||| |||||||| Sbjct 1593 GAAATTCTTGATTGGCCTTTGTGTGGTTCT-AATTAGCAGAGAAGAAAGAAGATGGGAAG 1651 Query 1658 AGATCAAAGTTGCGATAATACAATCTTCATCATGTGGATCTTCTGTGCTATGTTATAATA 1717 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct 1652 AGATCAAAGTTGCGATAATACAATCTTCATCATGTGGATCTTATGTGCTATGTTGTAATA 1711 Query 1718 GTATCTGTTTAAAGACCAAAAGAACCTTGTGTGTTGTTGTGTCTCTC--GTTTATCAGAA 1775 ||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||| Sbjct 1712 GTATCTGTTTAAAGACCAAAAAAACCTTGTGTGTTGTTGTCACTCTCCTGTTTATCAGAA 1771 Query 1776 TAATACATTATA--CAT-T-GAAGATTTATAATCCGTGGTGTTACTTGATGAAAGCTCCT 1831 |||||||||||| ||| | |||||||||||||| | | ||||| |||||||||| |||| Sbjct 1772 TAATACATTATATACATGTTGAAGATTTATAATC-G-G-TGTTATTTGATGAAAGATCCT 1828 Query 1832 TCTTCCTTGAAAGATTGTGACATA--T-TCTTATATATTTCTCATATATTAACGAATGTA 1888 |||||||||||| | ||||||| | | ||| | || || |||||||||||||||| | | Sbjct 1829 TCTTCCTTGAAAAAATGTGACAGACATGTCT-A-ATGTT-CTCATATATTAACGAA-G-A 1883 Query 1889 ATCCCGTAAGAGCTGTCGACAAAGACGTGATTTTTAGTC 1927 || |||||||||||||||||||| ||| ||||||||| Sbjct 1884 --CC-GTAAGAGCTGTCGACAAAGATGTGTTTTTTAGTC 1919 > Ahg312977 jgi|Araly1|312977|fgenesh1_pm.C_scaffold_1001757 Length=2946 Score = 1110 bits (601), Expect = 0.0 Identities = 1178/1454 (81%), Gaps = 49/1454 (3%) Strand=Plus/Plus Query 153 CCC-TTCTTCACCACCAACTCTGGTGCTCCTGTATGGAACAACAACTCCTCCATGACCGT 211 ||| |||||||| || ||||||||||||||||| ||||| |||||||| || |||| || Sbjct 1509 CCCTTTCTTCACTACAAACTCTGGTGCTCCTGTGTGGAATAACAACTCTTCTTTGACTGT 1568 Query 212 TGG-ACCCAGAGGTCCTATCCTTCTTGAGGATTACCATCTCG-TTGAGAAGCTTGCCAA- 268 || || | ||||||| || ||||| ||||| || ||||| | ||||||| || ||||| Sbjct 1569 CGGAACTC-GAGGTCCAATTCTTCTGGAGGACTATCATCT-GCTTGAGAAACTCGCCAAC 1626 Query 269 TTTCGACAGGGAACGGATTCCAGAGCGTGTGGTTCATGCCAGAGGAGCCAGTGCTAAAGG 328 ||| |||||||| |||||||| ||| | || ||||||||||| |||||||||||||| || Sbjct 1627 TTT-GACAGGGAGCGGATTCCTGAGAGGGTTGTTCATGCCAGGGGAGCCAGTGCTAAGGG 1685 Query 329 TTTCTTTGAGGTCACTCATGATA-T-CTCTAACCTCACTTGTGCTGACTTTCTCCGAGCT 386 ||||||||| ||||||||||| | | | | || || |||| |||||| ||||| |||| Sbjct 1686 TTTCTTTGAAGTCACTCATGACATTACAC-AA-CTTACTTCTGCTGATTTTCTTCGAGGA 1743 Query 387 CCCGGTGTTCAGACTCCTGTCATTGTCCGGTTCTCCACCGTTATCCATGAGCGTGGAAGT 446 || |||| |||||||||||| || || || ||||| || || |||||||||||||| ||| Sbjct 1744 CCTGGTGCTCAGACTCCTGTTATCGTTCGTTTCTCAACTGTCATCCATGAGCGTGGCAGT 1803 Query 447 CCCGAGACCT-TGAGAGACCCTCGTGGTTTTGCAGTCAAGTTCTACACCAGAGAGGGGAA 505 ||||||| || | ||||| |||||||||||||| || ||||| ||||||||||||||||| Sbjct 1804 CCCGAGA-CTCTCAGAGATCCTCGTGGTTTTGCTGTTAAGTTTTACACCAGAGAGGGGAA 1862 Query 506 CTTTGATCTTGTTGGAAACAACTTTCCTGTTTTCTTCATCCGCGATGGGATGAAGTTCCC 565 ||||||||||||||| |||||||| ||||| |||||| |||| ||||| ||||| ||||| Sbjct 1863 CTTTGATCTTGTTGGGAACAACTTCCCTGTATTCTTCGTCCGTGATGGAATGAAATTCCC 1922 Query 566 TGACATGGTCCACGCTCTT-AAGCCGAA-CCCAAAATCTCACATCCAAGAGAACTGGAGA 623 |||||||||||| || || || ||||| ||||| || ||||| || |||||||||||| Sbjct 1923 TGACATGGTCCATGCA-TTGAAACCGAATCCCAAG-TCCCACATTCAGGAGAACTGGAGA 1980 Query 624 ATCCTTGACTTCTTCTCCCACCACCCTGAAAGTTTGAACATGTTCACTTTCCTCTTCGAT 683 || || |||||||||||||||||||| || |||||| ||||||| | |||||||| ||| Sbjct 1981 ATACTGGACTTCTTCTCCCACCACCCAGAGAGTTTGCACATGTTTTCGTTCCTCTTTGAT 2040 Query 684 GATATCGGTATCCCACAAGATTACAGGCACATGGATGGTTCAGGTGTCAATACATACATG 743 ||| ||||||||||||| || |||||||||||||| || | || ||||| || |||||| Sbjct 2041 GATCTCGGTATCCCACAGGACTACAGGCACATGGAAGGCGCTGGGGTCAACACTTACATG 2100 Query 744 TTGATCAACAAAGCTGGCAAAGCTCACTACGTGAAGTTCCATTGGAAACCAACTTGTGG- 802 | |||||||||||||| ||||||||||| ||||| ||||| ||||| || |||||||| Sbjct 2101 CTAATCAACAAAGCTGGAAAAGCTCACTATGTGAAATTCCACTGGAAGCCTACTTGTGGG 2160 Query 803 AGTCAAGT-CTCTTTTGGAAGAAGATGCAATTC-GTGTTGGAGGAACCAACCACAGTCAT 860 | |||| | | || | ||| || || || || | | ||||||||| |||| ||||| ||| Sbjct 2161 A-TCAAATGC-CTGTCGGATGAGGAAGCTAT-CAGAGTTGGAGGATCCAATCACAGCCAT 2217 Query 861 GCGACTCAAGA-CTTGTATGACTCTATAGCTGCTGGAAACTACCCTGAATGGAAGCTCTT 919 || ||| |||| || |||||||| || || || || ||||| || | ||||| ||||| Sbjct 2218 GCTACTAAAGATCTC-TATGACTCGATCGCAGCCGGGAACTATCCACAGTGGAATCTCTT 2276 Query 920 TATCCAAATCATTGATCCTGCTGATGAAGACAAGTTCGACTTT-GACCCGCTCGATGTGA 978 | || | || |||||||| | |||||||| ||||| ||| || ||||| ||||| | Sbjct 2277 CGTTCAGGTGATGGATCCTGCCCACGAAGACAAATTCGA-TTTCGATCCGCTTGATGTCA 2335 Query 979 CCAAGACCTGGCCTGAGGATATCTTGCCTCTTCAACCTGTTGGACG-TATGGTGTTGAAC 1037 | |||| |||||||| |||||||||||||| ||||||||||| || | |||| |||||| Sbjct 2336 CAAAGATTTGGCCTGAAGATATCTTGCCTCTACAACCTGTTGGCCGCT-TGGTCTTGAAC 2394 Query 1038 AAGAACATTGACAACTTCTTTGCA-GAGAATGAGCA-ACTTGCTTTCTGTCCTGCAATTA 1095 |||||||| |||||||||||| | ||||| || || | |||||||||||||||| || Sbjct 2395 AAGAACATCGACAACTTCTTTA-ATGAGAACGAACAGA-TTGCTTTCTGTCCTGCTCTTG 2452 Query 1096 TTGTCCCAGGGATACATTACTCAGATGATAAGCTGCTTCAAACCCGTG-TCTTCTCCTAT 1154 | || ||||| || || || ||||||||||| || || || ||||| | |||||||||| Sbjct 2453 TGGTTCCAGGCATCCACTATTCAGATGATAAACTACTCCAGACCCG-GATCTTCTCCTAC 2511 Query 1155 GCCGATACTCAGAGACACCGTCTTGGACCAAACTACCTTCAGCTGCCAGTCAATGCTCCA 1214 || |||| ||||||||||||||||||||||||||| || || || || |||||||| || Sbjct 2512 GCTGATAGTCAGAGACACCGTCTTGGACCAAACTATCTGCAACTACCTGTCAATGCCCCT 2571 Query 1215 AAATGTGCTCACCACAACAACCACCATGAGGGATTCATGAATTTCATGCACAGGGACGAG 1274 |||||||||||||||||||| |||||||| || || ||||| |||||||||||||| ||| Sbjct 2572 AAATGTGCTCACCACAACAATCACCATGATGGTTTTATGAACTTCATGCACAGGGATGAG 2631 Query 1275 GAGGTTAACTACTTCCCGTCGAGGTATG-A-CCAGGTTCGTCATGCTGAGAAGTATCCAA 1332 ||||| || |||||||| || |||| || | |||| |||| ||||| || || || || | Sbjct 2632 GAGGTCAATTACTTCCCTTCAAGGT-TGGATCCAG-TTCGCCATGCCGAAAAATACCCTA 2689 Query 1333 CTCCGCCTGCTGTCTGTTCTGGAAAACGTGAGAGGTGCATT-ATTGAGAAAGAGAACAAC 1391 | | ||| ||| || |||||||| ||||||| |||| || |||| ||| ||||||||| Sbjct 2690 CAACTCCTATTGTATGCTCTGGAAATCGTGAGAAGTGC-TTCATTGGGAAGGAGAACAAC 2748 Query 1392 TTCAAGGAGCCTGGAGAGAGATACCG-TACCTTT-ACACCAGAGAGGCAAGAACGATTCA 1449 |||||| | || || ||||||||||| | ||| | | || |||||||| || ||| Sbjct 2749 TTCAAGCAACCAGGGGAGAGATACCGGT-CCTGGGATTCG-GACAGGCAAGAGCGGTTCG 2806 Query 1450 TCCAGAGATG-GATTGATGCCCTATCCGACCCACGCATCACGCATGAAATCCGCAGTATC 1508 | || | | | |||| || || || || || || ||||||| ||||||||||| || Sbjct 2807 TGAAGCGTTTTG-TTGAAGCGCTTTCGGAGCCTCGTGTCACGCACGAAATCCGCAGCATT 2865 Query 1509 TGGATCTCTTACTGGTCTCAGGCTGATAAGTCTTTGGGACAGAAGCTGGCAAGC-CGTCT 1567 ||||||||||||||||||||||| || || || |||||||||| || || | | ||||| Sbjct 2866 TGGATCTCTTACTGGTCTCAGGCAGACAAATCACTGGGACAGAAACTAGCGA-CTCGTCT 2924 Query 1568 GAACGTGAGACCAA 1581 |||||||| |||| Sbjct 2925 TAACGTGAGGCCAA 2938 Score = 798 bits (432), Expect = 0.0 Identities = 1150/1489 (77%), Gaps = 80/1489 (5%) Strand=Plus/Plus Query 125 GTATCGTCCAGCTAGTTCTTACAACTCTCCC-TTCTTCACCACCAACTCTGGTGCTCCTG 183 ||||||||| | ||| | |||||| | ||| |||| |||||| ||| |||| |||| | Sbjct 36 GTATCGTCCTTCGAGTGCGTACAACGC-CCCATTCTACACCACAAACGGTGGTACTCCAG 94 Query 184 TATGGAACAACAACTCCTCCATGACCGTTGGACCCAGAGGTCCTATCCTTCTTGAGGATT 243 | | ||||||| ||| ||| | ||| | ||| |||||||| | ||||||||||| | Sbjct 95 TCTCCAACAACATCTCTTCCCTCACCATCGGAGAGAGAGGTCCGGTTCTTCTTGAGGACT 154 Query 244 ACCATCTCG-TTGAGAAGCTTGCCAATTTCGA-CAGGGA-ACGGATTCCAGAGCGTGTGG 300 ||||||| | | |||||| ||||||||||| | ||| || | |||| || ||| | |||| Sbjct 155 ACCATCT-GATCGAGAAGGTTGCCAATTTC-ACCAGAGAGA-GGATCCCTGAGAGAGTGG 211 Query 301 TTCATGCCAGAGGAGCCAGTGCTAAAGGTTTCTTTGAGGTCACTCATGATATCTCTAACC 360 |||||||||||||| ||||||||| ||||||||||| ||||| ||||| || || |||| Sbjct 212 TTCATGCCAGAGGAATCAGTGCTAAGGGTTTCTTTGAAGTCACCCATGACATTTCAAACC 271 Query 361 TCACTTGTGCTGACTTTCTCCGAGCTCCCGGTGTTCAGACTCCTGTCATTGTCCGGTTCT 420 ||||||||||||| |||||| ||||||| |||||||| ||||| || |||||||| |||| Sbjct 272 TCACTTGTGCTGATTTTCTCAGAGCTCCTGGTGTTCAAACTCCGGTTATTGTCCGTTTCT 331 Query 421 CCACCGTTATCCATGAGCGTGGAAGTCCCGAGACCTTGAGAGACCCTCGTGGTTTTGCAG 480 |||||||| |||| || |||| ||||| || ||| |||| || ||||||||| || | Sbjct 332 CCACCGTTGTCCACGAACGTGCTAGTCCTGAAACCATGAGGGATATTCGTGGTTTCGCTG 391 Query 481 TCAAGTTCTACACCAGAGAGGGGAACTTTGATCTTGTTGGAAACAACTTTCCTGTTTTCT 540 ||||||| |||||||||||||||||||||||||||||||| |||||| ||| || |||| Sbjct 392 TCAAGTTTTACACCAGAGAGGGGAACTTTGATCTTGTTGGGAACAACACTCCCGTGTTCT 451 Query 541 TCATCCGCGATGGGATG-AAGTTCCCTGACATGGTCCACGCTCTTAAGCCGAACCC-AAA 598 ||||||| || ||||| || ||||| || | |||||||| || || || ||||| ||| Sbjct 452 TCATCCGTGACGGGATTCAA-TTCCCCGATGTTGTCCACGCCCTGAAACCAAACCCGAAA 510 Query 599 ATCTCACATCCAAGAGAACTGGAGAATCCTTGACTTCTTCTCCCACCACCCTGAAAGTTT 658 | | ||||||||||| ||||||| || || |||| | | |||||| || || ||||| Sbjct 511 A-CAAACATCCAAGAGTACTGGAGGATTCTGGACTACATGTCCCACTTGCCAGAGAGTTT 569 Query 659 GA--ACATGTTCACTTTCCTCTTCGATGATATCGGTATCCCACAAGATTACAGGCACATG 716 | ||||| | || | || |||||| | ||||| ||||||||||||||||||||| Sbjct 570 GCTCACATGGTG-CTGGA-TGTTTGATGATGTTGGTATTCCACAAGATTACAGGCACATG 627 Query 717 GATGGTT-CAGGTGTCAATACATACA-TGTTGAT-CAACAAAGCTGGCAAAGCTCACTAC 773 || |||| | |||||| | || |||| | ||| | | |||| |||| |||| || || Sbjct 628 GAGGGTTTC-GGTGTCCACACCTACACTCTTGTTGC--CAAATCTGGAAAAGTTCTCTTT 684 Query 774 GTGAAGTTCCATTGGAAACCAACTTGTGG-AGTCAAGTCTCTTT-TGGAAGAAGATGC-A 830 ||||||||||| |||||||||||||| || | ||||| ||| || | ||||| || | Sbjct 685 GTGAAGTTCCACTGGAAACCAACTTGCGGGA-TCAAGAATCTGACTG-ATGAAGAGGCCA 742 Query 831 ATTCGT-GTTGGAGGAACCAACCACAGTCATGCGACTCAAG-A-CTTGTATGACT-CTAT 886 | || ||||||||| |||| ||||| || || ||| ||| | || | | || | | || Sbjct 743 AG--GTTGTTGGAGGAGCCAATCACAGCCACGCCACT-AAGGATCT-GCACGA-TGCCAT 797 Query 887 AGC-TGCTGGAAACTACCCTGAATGGAAGCTCTTT-ATCCAAATCATTGATCCTGCTGAT 944 | | | || |||||||| || ||||| || ||| ||||| | ||| |||||||| ||| Sbjct 798 TTCAT-CGGGCAACTACCCCGAGTGGAAACT-TTTCATCCAGACCATGGATCCTGCGGAT 855 Query 945 GAAGACAAGTTCGACTTTGACCCGCTCGATGTGACCAAGACCTGGCCTGAGGATATCTTG 1004 || || ||||| ||||||||||| || ||||||||||||| ||||||||||||||| ||| Sbjct 856 GAGGATAAGTTTGACTTTGACCCACTTGATGTGACCAAGATCTGGCCTGAGGATATTTTG 915 Query 1005 CCTCTTCAACCTGTTGGACG-TATGGTGT-TGAACAAGAACATTGACAACTTCTTTGCAG 1062 ||||| ||||| ||||| || | |||| | |||||| || ||||||||||||||| || Sbjct 916 CCTCTGCAACCGGTTGGTCGCT-TGGT-TCTGAACAGGACCATTGACAACTTCTT--CA- 970 Query 1063 A-GAA--TGAGCAACTTGCTTTCTGTCCTGCAATTATTGTCCCAGGGATAC-ATTACTCA 1118 | ||| |||||| || |||||| || | || | || || || || | | |||||| Sbjct 971 ACGAAACTGAGCAGCTCGCTTTCAACCCGGGTCTTGTGGTTCCTGGAAT-CTACTACTCA 1029 Query 1119 GATGATAAGCTGCTTCAAACCCGTG-TCTTCTCCT-ATGCCGATACTCAGAGACACCGTC 1176 || || |||||||| || | | |||| | || ||| || ||||||||||| |||| Sbjct 1030 GACGACAAGCTGCTCCAGTGTAG-GATCTT-TGCTTATGGTGACACTCAGAGACATCGTC 1087 Query 1177 TTGGACCAAACTACCTTCAGCTGCCAGTCAATGCTCCAAAATGTGCTCACCACAACAACC 1236 ||||||| || || || ||||| ||||| |||||||| |||||||||||||||||||| | Sbjct 1088 TTGGACCGAATTATCTGCAGCTACCAGTGAATGCTCCCAAATGTGCTCACCACAACAATC 1147 Query 1237 ACCATGAGGGATTCATGAATTTCATGCACAGGGACGAGGAGGTTAACTACTTCCCGTCGA 1296 ||||||| || || ||||| ||||||||||| ||||||||| | || |||| ||| || | Sbjct 1148 ACCATGAAGGTTTTATGAACTTCATGCACAGAGACGAGGAGATCAATTACTACCCCTCAA 1207 Query 1297 GGTATGA-CCAGGTTCG-TCATGCTGAGAA-GTATCCAACTCCGCCTGCTGTCTGTT-C- 1351 || ||| || | | || | ||| ||||| | ||| | ||| | | | || | | Sbjct 1208 AGTTTGATCCTG-TCCGCTG-TGCCGAGAAAGC-TCCTA-TCC-C-TACAAACTCCTACA 1261 Query 1352 -TGGAAAACGTG-AGAGGTGCATTATTGAGAAAGAGAACAACTTCAAGGAGCCTGGAGAG 1409 ||||| || | || ||| | || ||||||||||||||||||| || ||||||| Sbjct 1262 CTGGAATCCGAACAAAG-TGCGTCATCAAGAAAGAGAACAACTTCAAACAGGCTGGAGAC 1320 Query 1410 AGATACCGTACCTTTA-CACCAGAGAGGCAAGAACGATTCATCCAGAGATGGATTGATGC 1468 || ||| | | | | ||||||| |||||||| || || | |||||||| |||| | Sbjct 1321 AGGTACAG-ATCATGGGCACCAGACAGGCAAGACCGGTTTGTTAAGAGATGGGTTGA-GA 1378 Query 1469 C-CTATCCGACCCACG-CATCACGCATGAAATCCGCAGTATCTGGATCTCTTACTGGTCT 1526 || || || ||||| | |||| || || |||||| | ||||||||||||||||||||| Sbjct 1379 TTCTGTCGGAGCCACGTC-TCACCCACGAGATCCGCGGCATCTGGATCTCTTACTGGTCT 1437 Query 1527 CAGGCTGATA-AGTCT-TTGGGACAGAAGCTGGCAAGCCGTCTGAACGT 1573 ||||||||| | ||| |||| |||||| || ||||||||||||||||| Sbjct 1438 CAGGCTGATCGA-TCTCTTGG-ACAGAAACTTGCAAGCCGTCTGAACGT 1484 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 72523826480 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5