BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G35100.1
Length=1207
Score E
Sequences producing significant alignments: (Bits) Value
Ahg491143 jgi|Araly1|491143|fgenesh2_kg.7__576__AT4G35100.1 1679 0.0
Ahg480563 jgi|Araly1|480563|fgenesh2_kg.3__3264__AT2G16850.1 822 0.0
Ahg485715 jgi|Araly1|485715|fgenesh2_kg.5__1707__AT3G53420.1 357 1e-97
Ahg486618 jgi|Araly1|486618|fgenesh2_kg.5__2610__AT3G61430.2 350 2e-95
Ahg483737 jgi|Araly1|483737|fgenesh2_kg.4__2797__AT2G45960.1 327 8e-89
Ahg485893 jgi|Araly1|485893|fgenesh2_kg.5__1885__AT3G54820.1 305 4e-82
> Ahg491143 jgi|Araly1|491143|fgenesh2_kg.7__576__AT4G35100.1
Length=1045
Score = 1679 bits (909), Expect = 0.0
Identities = 1017/1065 (95%), Gaps = 24/1065 (2%)
Strand=Plus/Plus
Query 3 AGAAGAGATACACTGTCGTCGTCACACAGCACCACAAACTCCATAGCTAGC--TAGAGAG 60
|||||||| |||||| ||||||||||||||||||||||||||||| ||||| |||||||
Sbjct 1 AGAAGAGAGACACTGACGTCGTCACACAGCACCACAAACTCCATACCTAGCTTTAGAGAG 60
Query 61 TAA-AAAGAACAAAGATGTCGAAAGAAGTGAGCGAAGAAGGCAAAACCCACCATGGAAAA 119
|| ||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 61 -AAGAAAGAGCAAAGATGTCGAAAGAAGTGAGCGAAGAAGGAAAAACCCACCATGGGAAA 119
Query 120 GACTACGTGGATCCTCCACCAGCTCC-TCTTCTCGACATGGGTGAGCTCAAATCCTGGTC 178
|||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||
Sbjct 120 GACTACGTGGATCCTCCACCAGCTCCGT-TTTTCGACATGGGTGAGCTCAAATCCTGGTC 178
Query 179 TTTCTACAGAGCTCTCATCGCTGAGTTCATCGCTACACTCCTCTTCCTCTACGTCACCGT 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 179 TTTCTACAGAGCTCTCATCGCTGAGTTCATCGCTACACTCCTCTTCCTCTACGTCACTGT 238
Query 239 CGCTACTGTCATCGGCCACAAGAAGCAAACCGGTCCTTGTGACGGCGTTGGTTTACTTGG 298
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct 239 CGCTACTGTCATCGGCCACAAGAAGCAAACCGGTGCTTGTGACGGCGTTGGTTTACTCGG 298
Query 299 TATCGCTTGGGCTTTCGGTGGTATGATCTTCGTCCTCGTCTACTGCACCGCCGGTATCTC 358
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 299 CATCGCTTGGGCTTTCGGTGGTATGATCTTCGTCCTCGTTTACTGCACCGCCGGTATCTC 358
Query 359 TGGTGGTCACATTAACCCAGCTGTGACTTTCGGTCTGTTCTTGGCCCGTAAGGTCTCTTT 418
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 359 TGGTGGTCACATTAACCCAGCTGTGACTTTCGGTCTATTCTTAGCCCGTAAGGTCTCTTT 418
Query 419 GGTGCGAGCTCTTGGTTACATGATAGCTCAGTGTCTTGGAGCCATTTGTGGTGTGGGTTT 478
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 419 GGTGAGAGCTCTTGGTTACATGATAGCTCAGTGTCTTGGAGCCATTTGTGGTGTGGGTTT 478
Query 479 CGTGAAAGCTTTCATGAAAACTCCTTACAACACTCTTGGTGGAGGAGCTAACACCGTAGC 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 479 CGTGAAAGCTTTCATGAAAACTCCTTACAACACTCTTGGTGGAGGAGCTAACACCGTAGC 538
Query 539 TGACGGTTACAGCAAAGGAACTGCTCTCGGAGCTGAGATTATTGGAACTTTCGTCCTTGT 598
|||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 539 TGACGGCTACAGCAAAGGAACTGCTCTCGGAGCTGAGATTATCGGAACTTTCGTCCTTGT 598
Query 599 TTACACCGTTTTCTCTGCAACTGACCCTAAGAGAAGCGCTCGTGACTCTCACATCCCCGT 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 599 TTACACCGTTTTCTCTGCAACTGACCCTAAGAGAAGCGCTCGTGACTCTCACATCCCCGT 658
Query 659 TTTGGCTCCACTTCCAATTGGATTTGCTGTGTTCATGGTGCATTTGGCTACTATCCCCAT 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 659 TTTGGCTCCACTTCCAATTGGATTTGCTGTGTTCATGGTGCATTTGGCTACTATCCCCAT 718
Query 719 TACTGGAACTGGTATCAACCCAGCTAGAAGCTTTGGTGCTGCTGTTATCTACAACAACGA 778
||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 719 TACCGGAACTGGTATCAACCCAGCAAGAAGCTTTGGTGCTGCTGTTATCTACAACAACGA 778
Query 779 GAAGGCGTGGGATGACCAATGGATCTTTTGGGTTGGTCCGTTCTTGGGAGCACTAGCTGC 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 779 GAAGGCGTGGGATGACCAATGGATCTTTTGGGTTGGTCCGTTCTTGGGAGCACTAGCTGC 838
Query 839 AGCAGCTTACCACCAATACATATTGAGAGCTTCAGCAATTAAGGCCTTGGGCTCGTTCCG 898
||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 839 AGCCGCTTACCATCAATACATATTGAGAGCTTCAGCAATTAAGGCCTTGGGCTCTTTCCG 898
Query 899 AAGCAACGCAACCAATTAATGAAGGCtttttttAAGATAATGTCAAGAAACAACTTTAAG 958
||||||||||||||||||||||| | | | | ||||||||||||||||
Sbjct 899 AAGCAACGCAACCAATTAATGAA---T--------G-T---G--AAGAAACAACTTTAAG 941
Query 959 ATTTATATGCTTTAATTATTATTTGTTGTTCTTTTGTGTGTAATGAGAGAGATGGTGGAT 1018
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 942 ATTTATATGCTTTA-TTATTATTTGTTGTTCTTTTGTGTGTAATGAGAGAGATGGTGGAT 1000
Query 1019 TGATGTTAATTATGAAATGGCTCAGTGACTTCTATTTCCTTCTTT 1063
||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct 1001 TGATGTTAATTATGAAATGGCTCAGTGACTTCTGTTTCTTTCTTT 1045
> Ahg480563 jgi|Araly1|480563|fgenesh2_kg.3__3264__AT2G16850.1
Length=1043
Score = 822 bits (445), Expect = 0.0
Identities = 726/860 (84%), Gaps = 26/860 (3%)
Strand=Plus/Plus
Query 71 AAAGATGTCGAAAGAAGTGAGCGAAGAAGGCAAAACCCACCATGGAAAAGACTACGTGGA 130
||| ||||| ||||||||||| |||||||| || | ||||| ||||||||||| ||
Sbjct 52 AAAAATGTCAAAAGAAGTGAGTGAAGAAGG---AA--GA-CATGGCAAAGACTACGTTGA 105
Query 131 TCCTCCACCAGCTCCTCTTCTCGACATGGGTGAGCTCAAATC-CTGGTCTTTCTACAGAG 189
||| || |||||||| ||||| ||||||| |||| | || | |||||||||||||||||
Sbjct 106 TCCACCTCCAGCTCCACTTCTAGACATGGCTGAGAT-TAAGCTCTGGTCTTTCTACAGAG 164
Query 190 CTCTCATCGCTGAGTTCATCGCTACACTCCTCTTCCTCTACGTCACCGTCGCTACTGTCA 249
|| |||| || ||||||||||| || ||||||||||||||||| ||||| ||||| ||||
Sbjct 165 CTATCATTGCAGAGTTCATCGCCACTCTCCTCTTCCTCTACGTAACCGTTGCTACAGTCA 224
Query 250 TCGGCCACAAGAAGCAAACCGGTCCTTGTGACGGCGTTGGTTTACTTGGTATCGCTTGGG 309
| ||||||||||| |||| |||||||||||| || ||||||||||| || || || ||||
Sbjct 225 TTGGCCACAAGAACCAAATCGGTCCTTGTGATGGTGTTGGTTTACTCGGCATTGCATGGG 284
Query 310 -CTTTCGGTGGTATGATCTTCGTCCTCGTCTACTGCACCGCCGGTATCTCTGGTGGTCAC 368
|||| ||||| |||||||| |||||||| || ||||||||||||||||| || |||||
Sbjct 285 CCTTT-GGTGGCATGATCTTTGTCCTCGTTTATTGCACCGCCGGTATCTCCGGAGGTCAT 343
Query 369 ATTAACCCAGCTGTGAC-TTTCGGTCTGTTCTTGGCCCGTAAGGTCTCTTTGGTGCGAGC 427
||||| ||||| ||||| ||| |||||||||||||| ||||| || || | | ||||
Sbjct 344 ATTAATCCAGCAGTGACATTT-GGTCTGTTCTTGGCTCGTAAAGTGTCACTCCTTAGAGC 402
Query 428 TCTTGGTTACATGATAGCTCAGTGTCTTGGAGCCATTTGTGGTGTGGGTTTCG-TGAAAG 486
||| |||||| | |||||||||||||||||||||||||| || || ||| || |||
Sbjct 403 AGTTGCATACATGGTGGCTCAGTGTCTTGGAGCCATTTGTGGAGTTGGACTCGTTG-AAG 461
Query 487 -CTTTCATGAAAACTCCTTACAACAC-TCTTGGTGGAGGAGCTAACACCGTAGCTGACGG 544
|||| |||| ||||| ||||| || ||| ||||| |||||||||||||||||||| ||
Sbjct 462 CCTTT-ATGATGACTCCATACAA-ACGTCTAGGTGGCGGAGCTAACACCGTAGCTGATGG 519
Query 545 TTACAGCAAAGGAACTGCTCTCGGAGCTGAGATTATTGGAAC-TTTCGTCCTT-GTTTAC 602
||| |||| ||||||||||| || |||||||||||||| || ||| || ||| ||||||
Sbjct 520 TTATAGCACCGGAACTGCTCTTGGTGCTGAGATTATTGGCACATTT-GT-CTTGGTTTAC 577
Query 603 ACCGTTTTCTCTGCAACTGACCCTAAGAGAAGCGCTCGTGACTCTCACATCCCCGTTTTG 662
|| || |||||||| ||||||||||| |||||||| |||||||||||| |||| ||||||
Sbjct 578 ACTGTCTTCTCTGCCACTGACCCTAAAAGAAGCGCGCGTGACTCTCACGTCCCGGTTTTG 637
Query 663 GCTCCACTT-CCAATTGGATTTGCTGTGTTCATGGTGCATTTGGCTACTATCCCCATTAC 721
||||| || || ||||| || || |||||||||||||||||||||||||||||||| ||
Sbjct 638 GCTCC-GTTACCTATTGGGTTCGCAGTGTTCATGGTGCATTTGGCTACTATCCCCATCAC 696
Query 722 TGGAACTGGTATCAACCCAGCTAGAAGCTTTGGTGCTGCTGTTATCTACAACAACGAGAA 781
||||||||| || || |||||||||||||||||||||||||||||||||||||| || ||
Sbjct 697 TGGAACTGGAATTAATCCAGCTAGAAGCTTTGGTGCTGCTGTTATCTACAACAATGAAAA 756
Query 782 GGCGTGGGATGACCAATGGATCTTTTGGGTTGGTCCGTTCTTGGGAGCACTAGCTGCAGC 841
|| ||||| ||||| ||||||||||||||||| || ||| |||||||| |||| |||||
Sbjct 757 AGCTTGGGAGGACCATTGGATCTTTTGGGTTGGACCATTCGTGGGAGCATTAGCAGCAGC 816
Query 842 AGCTTACCACCAATACATATTGAGAGCTTCAGCAATTAAGGCCTTGGGCT-CGTTCCGAA 900
||| ||||| |||||||| ||||||||| ||||||| || ||||||| || | ||||| |
Sbjct 817 AGCATACCATCAATACATCTTGAGAGCTGCAGCAATCAAAGCCTTGG-CTTCATTCCGCA 875
Query 901 GCAACGCAACCAATTAATGA 920
||||| ||||||||| ||||
Sbjct 876 GCAACCCAACCAATTGATGA 895
> Ahg485715 jgi|Araly1|485715|fgenesh2_kg.5__1707__AT3G53420.1
Length=1272
Score = 357 bits (193), Expect = 1e-97
Identities = 572/744 (77%), Gaps = 70/744 (9%)
Strand=Plus/Plus
Query 174 TGGTCTTTCTACAGAGCTCTCATCGCTGAGTTCATCGCTACACTCCTCTTCCTCTACGTC 233
|||||||| |||||||| ||||||| |||||| | ||||| ||||||||| | ||||||
Sbjct 307 TGGTCTTTTTACAGAGCAGTCATCGCCGAGTTCGTAGCTACTCTCCTCTTCTTATACGTC 366
Query 234 ACCGTCGCT-ACTGTCATCGGCCACAAGA---AG--C---A--AA--CCGGTCCTTGT-G 279
||||| | ||||||||||| |||||| || | | || |||| | || |
Sbjct 367 ACCGT-TTTGACTGTCATCGGTTACAAGATTCAGTCCGATACTAAGGCCGG-CGGGGTAG 424
Query 280 A---CGGC---GTTGGTTTACTTGGTATCGCTTGGG-CTTTCGGTGGTATGATCTTCGTC 332
| |||| ||||| | || ||||||||||||| |||| ||||||||||||||| ||
Sbjct 425 ACTGCGGCGGAGTTGGAATCCTCGGTATCGCTTGGGCCTTT-GGTGGTATGATCTTCATC 483
Query 333 CTCGTCTACTGCACCGCCGGTATCTCTGGTGGTCACATTAACCCAGCTGTGAC-TTTCGG 391
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||
Sbjct 484 CTCGTCTACTGCACCGCCGGTATCTCTGGTGGTCACATTAACCCAGCGGTGACATTTGGG 543
Query 392 TCTGTTCTTGGCCCGTAAGGTCTCTTTGG-T-GCGAGC--TCTTGGTTACAT-GATAGCT 446
|| |||||||| ||||| || || ||| | | | || | ||| | |||| | | |||
Sbjct 544 -CTATTCTTGGCACGTAAAGTGTCGTTGCCTAG-G-GCCATATTG-T-ACATTG-TGGCT 597
Query 447 CAGTGTCTTGGA-GCCATTTGTGGTGTGGG-TTTCGTGAAAGCTTTCATGAAAACTCCTT 504
|||||| |||| || |||||||| || || ||| || ||||| ||| ||| ||| ||
Sbjct 598 CAGTGT-TTGGGTGCGATTTGTGGAGTTGGATTT-GTCAAAGCCTTCC--AAAGCTC-TT 652
Query 505 ACAAC-ACTC-TT--GGTGGAGGAGCTAACAC-CGTAGCTGACGGTTACAGCAAAGGAAC 559
|| | || | || || || ||||| ||| | | | || || || ||||||| ||| ||
Sbjct 653 ACTATGAC-CGTTACGGCGGTGGAGCCAACTCTCTT-GCCGATGGCTACAGCACAGGGAC 710
Query 560 TGCTCTCG-GAGCTGAGATTATTGGAACTTTCGTCCTTGTTTACACCGTTTTCTCTGCAA 618
| ||| | | || ||||| ||||| |||||||| ||||| |||||||| |||||||| |
Sbjct 711 CGGTCTAGCG-GCAGAGATCATTGGTACTTTCGTTCTTGTCTACACCGTCTTCTCTGCCA 769
Query 619 CTGACCCTAAGA-GAAGCGCTC-GTGACTCTCACATCCCCGTTTTGGCTCCACTTCCAAT 676
||||||| || | | || || | | ||||| ||| | || || ||||| |||||||||||
Sbjct 770 CTGACCCCAA-ACGTAGTGC-CAGAGACTCCCACGTTCCGGTGTTGGCGCCACTTCCAAT 827
Query 677 TGGATTTGCTGTGTTCATGGTGCATTTGGCTACTATCCCCATTACTGGAACTGGTATCAA 736
||||| || ||||||||||| |||||||| || || ||||| || ||||| || || ||
Sbjct 828 CGGATTCGCGGTGTTCATGGTACATTTGGCCACCATTCCCATCACCGGAACCGGAATTAA 887
Query 737 CCCAGCTAGAAGCTTT-GGTGCTGCTGTTATCTACAACAACGAG-AAGGCGTGGGATGAC 794
||| || || || ||| || ||||| || |||| |||||| ||| ||| | |||||||||
Sbjct 888 CCCGGCAAGGAG-TTTCGGAGCTGCCGTAATCTTCAACAA-GAGCAAGCCATGGGATGAC 945
Query 795 CAATGGATCTTTTGGGTTGGTCCGTTC-TTGG-GA-GC-ACTAGCTGCAGCAGCTTACCA 850
|| ||||| ||||||||||| || ||| |||| | || | |||||||| || ||||
Sbjct 946 CACTGGATATTTTGGGTTGGACCATTCATTGGAGCTGCGA-TAGCTGCATT--CT-ACCA 1001
Query 851 CCAATACATAT-TGAGAGCTTCAG 873
||||| | | | |||| |||||||
Sbjct 1002 CCAATTCGT-TCTGAGGGCTTCAG 1024
> Ahg486618 jgi|Araly1|486618|fgenesh2_kg.5__2610__AT3G61430.2
Length=1227
Score = 350 bits (189), Expect = 2e-95
Identities = 556/728 (76%), Gaps = 45/728 (6%)
Strand=Plus/Plus
Query 135 CCACCAGCTCC-TCTTCTCGA-CATGGGTGAGCTCAAATCCTGGT-CTTTCTACAGAGCT 191
||||| ||||| | || |||| | | |||||||| || |||| |||| | ||||||
Sbjct 280 CCACCGGCTCCGT-TTTTCGAGCCT-GGTGAGCTTTCTTCATGGTCCTTT-TGGAGAGCT 336
Query 192 CTCATCGCTGAGTTCATCGCTACACTCCTCTTCCTCTACGTCACCGTCGCT-ACTGTCAT 250
|||||||||||||||||||| |||||||||||||| |||| || | ||||| ||
Sbjct 337 GGGATCGCTGAGTTCATCGCTACTTTCCTCTTCCTCTACATCACTGT-TTTGACTGTTAT 395
Query 251 CGGCCACAAGAAGCAAACCG-GTCCT-TGTGAC-GGCGTTGGTTTACTTGGTATCGCTTG 307
|| || ||| |||| | | |||| | ||| || | | || ||||||||
Sbjct 396 GGGAGTTAA-AAGGTCACCGAAT-ATGTGTG-CTTCCGTCGGAATCCAAGGAATCGCTTG 452
Query 308 GGCTTTCGGTGGTATGATCTTCGTCCTC-GTCTACTGCACCGCCGGTATCTCTGGTGGTC 366
||||||||||||||||||||| | ||| |||||||||||||| |||||||| ||||| |
Sbjct 453 GGCTTTCGGTGGTATGATCTTTG-CCTTAGTCTACTGCACCGCTGGTATCTCCGGTGGAC 511
Query 367 ACATTAACCCAGCTGTGACTTTCGGTCTGTTCTTGGCCCGTAAG--GTCTCTTTGGTGCG 424
|||| ||||| || || ||||| ||||||||||| ||||| ||| ||| ||| |
Sbjct 512 ACATCAACCCGGCGGTTACTTTTGGTCTGTTCTTAGCCCGGAAGCTGTCGCTTACCAG-- 569
Query 425 AGCTCT-TGGTTACAT-GATAGCT-CAGTGTCTTGG-AGCCATTTGTGGTG-TGG-GTTT 478
|||||| | | |||| | | | | ||||| ||||| |||||| ||||||| ||| ||
Sbjct 570 AGCTCTGTACT-ACATAG-T-GATGCAGTG-CTTGGGAGCCATCTGTGGTGCTGGCGTG- 624
Query 479 CGTGAAAGCTTTC-ATGAA-AACTCCTTACAACACTCTTGGTGGAGGAGCTAACACCGTA 536
|| |||| ||| | | || | ||| | |||| || |||||||||||||| ||
Sbjct 625 -GTCAAAGGATTCCA-GCCTAAG-CAATACCAGGCTCTAGGAGGAGGAGCTAACACTGTG 681
Query 537 GCTGACGGTTACAGCAAAGGAACTGCTCTCGGAGCTGAGATTATTGGAACTTTCGTCCTT 596
||| | ||||||| |||||||| || ||| ||||||||||||||||| ||||| ||||||
Sbjct 682 GCTCATGGTTACACCAAAGGAAGTGGTCTTGGAGCTGAGATTATTGGCACTTTTGTCCTT 741
Query 597 GTTTACACCGTTTTCTCTGCAACTGAC-CCTAAGAGAAGCGCTCGTGACTCTCACATCCC 655
|| ||||| || ||||| ||||||||| || ||||||| ||||||||||||||| ||||
Sbjct 742 GTATACACAGTCTTCTCAGCAACTGACGCC-AAGAGAAACGCTCGTGACTCTCATGTCCC 800
Query 656 CGTT-TTGGCTCCACTTCCAATTGGATTTGCTGTGTTCATGGTGCATTTGGCTACTATCC 714
|| ||| | ||||| ||||| || ||||| || ||| |||| || ||||| || ||||
Sbjct 801 TATTCTTG-CACCACTCCCAATCGGGTTTGCGGTTTTCTTGGTTCACTTGGCAACCATCC 859
Query 715 CCATTACTGGAACTGGTATCAACCCAGCTAGAAG-CTTTGGTGCTGCTGTTATCTACAAC 773
| || ||||| || || ||||||||||||||||| ||| || ||||| | |||||||||
Sbjct 860 CAATCACTGGCACAGGCATCAACCCAGCTAGAAGTCTT-GGAGCTGCAATCATCTACAAC 918
Query 774 AACGAGAAGGCGTGGGATGACCAATGGATCTTTTGGGTTGGTCCGTTC-TTGG-GA-GCA 830
|| || | | ||||| ||||| ||| | ||||||||||| || ||| |||| | |||
Sbjct 919 AAAGACCATTCATGGGACGACCACTGGGTGTTTTGGGTTGGACCCTTCATTGGAGCTGCA 978
Query 831 CTAGCTGC 838
|| |||||
Sbjct 979 CTTGCTGC 986
> Ahg483737 jgi|Araly1|483737|fgenesh2_kg.4__2797__AT2G45960.1
Length=1270
Score = 327 bits (177), Expect = 8e-89
Identities = 433/554 (78%), Gaps = 27/554 (5%)
Strand=Plus/Plus
Query 300 ATCGCTTGGGCTTTCGGTGGTATGATCTTCG-TCCTCGTCTACTGCACCGCCGGTATCTC 358
||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||
Sbjct 412 ATCGCTTGGGCTTTCGGTGGTATGATCTTCGCTC-TCGTCTACTGCACCGCTGGTATCTC 470
Query 359 TGGTGGTCACATTAACCCAGCTGTGACTTTCGGTCTGTTCTTGGCCCGTAAGGTCTCTTT 418
||||| ||||| |||||||| || || |||||| ||||||| ||| | ||| | || |
Sbjct 471 CGGTGGACACATCAACCCAGCGGTTACGTTCGGTTTGTTCTTAGCCAGGAAGCTTTCGCT 530
Query 419 GGTGCGAGCTCT-TGGTTACAT-GATAGCT-CAGTGTCTT-GGAGCCATTTGTGGTG-TG 473
|||||| | | | |||| | | | | ||||| ||| ||||| || ||||| | ||
Sbjct 531 CACACGAGCTGTGTACT-ACATAG-T-GATGCAGTG-CTTAGGAGCTATCTGTGGAGCTG 586
Query 474 GGTTTCGTGAAAGCTTTC-ATGAAAACTCCTTACAACACTCTTGGT-GGAGGAGCTAACA 531
| | | || || | ||| | ||| | ||| | || |||| || ||||| ||||
Sbjct 587 G-TGTGGTCAAGGGGTTCCAACCAAAG-CAATACCAGGCT-TTGGGAGGTGGAGCCAACA 643
Query 532 CCGTAGCTGACGGTTACAGCAAA-GGAACTGCTCTCGGAGCTGAGATTATTGGAAC-TTT 589
|| ||||| | ||||||| |||| |||| || ||| |||||||||||||||||||| |||
Sbjct 644 CCATAGCTCATGGTTACA-CAAAAGGAAGTGGTCTTGGAGCTGAGATTATTGGAACCTTT 702
Query 590 CGTCCTTGTTTACACCGTTTTCTCTGCAACTGAC-CCTAAGAGAAGCGCTCGTGACTCTC 648
||||||||||||||||| ||||| || ||||| || ||||||| ||||||||||||||
Sbjct 703 -GTCCTTGTTTACACCGTCTTCTCAGCCACTGATGCC-AAGAGAAACGCTCGTGACTCTC 760
Query 649 ACATCCCCGTTTTGGCTCCACTTCCAATTGGATTTGCTGTGTTCATGGTGCATTTGGCTA 708
| | || || | || || || ||||| ||||| ||||||||| |||| || || || |
Sbjct 761 ATGTTCCTATTCTAGCACCGCTCCCAATCGGATTCGCTGTGTTCTTGGTTCACTTAGCAA 820
Query 709 CTATCCCCATTACTGGAACTGGTATCAACCCAGCTAGAAG-CTTTGGTGCTGCTGTTATC 767
| |||||||| |||||||| || ||||||||||| ||||| ||| || ||||| | ||
Sbjct 821 CCATCCCCATCACTGGAACCGGAATCAACCCAGCAAGAAGTCTT-GGAGCTGCAATCATT 879
Query 768 TACAACAACGAGAAGGCGTGGGATGACCAATGGATCTTTTGGGTTGGTCCGTTC-TTGG- 825
| |||||| || || || ||||| ||||| ||| ||||||||||||| || ||| ||||
Sbjct 880 TTCAACAAGGACAACGCCTGGGACGACCATTGGGTCTTTTGGGTTGGACCATTCATTGGT 939
Query 826 GA-GCACTAGCTGC 838
| ||||| |||||
Sbjct 940 GCTGCACTTGCTGC 953
> Ahg485893 jgi|Araly1|485893|fgenesh2_kg.5__1885__AT3G54820.1
Length=1150
Score = 305 bits (165), Expect = 4e-82
Identities = 523/688 (76%), Gaps = 55/688 (8%)
Strand=Plus/Plus
Query 174 TGGTCTTTCTACAGAGCTCTCATCGCTGAGTTCATCGCTACACTCCTCTTCCTCTACGTC 233
||||||||||||||||||||||||||||||||||| || || |||||||||||||| |||
Sbjct 182 TGGTCTTTCTACAGAGCTCTCATCGCTGAGTTCATAGCCACTCTCCTCTTCCTCTATGTC 241
Query 234 ACCGTCGCT-ACTGTCATCGGCCACAAGA---AG-C--A--AA-CCG-G--TCCT----- 275
||||| | ||||||||||| |||||| || | | || || | ||||
Sbjct 242 ACCGTTA-TGACTGTCATCGGTTACAAGAGCCAGACCGATCAAGCCCTGAATCCTGACCA 300
Query 276 -TGTG-ACGGCGTTGGTTTACTTGGTATCGCTTGGGC-TTTCGGTGGTATGATCTTCGTC 332
|||| | |||||||| | ||||||||||| ||||| ||| ||||| ||||||||| ||
Sbjct 301 GTGTGCA-GGCGTTGGCGTCCTTGGTATCGCATGGGCCTTT-GGTGGCATGATCTTCATC 358
Query 333 CTCGTCTACTGCACCGCCGGTATCTCTGGTGGTCACATTAACCCAGCTGTGACTTTCGGT 392
|||||||||||||||||||| ||||||||||| || ||||| || || |||||||| ||
Sbjct 359 CTCGTCTACTGCACCGCCGGCATCTCTGGTGGCCATATTAATCCGGCCGTGACTTTTGGG 418
Query 393 CTGTTCTTGGCCCGTAAGGTCTCTTTGGTGCGAGCTCTTGGT-TACATGATAGCTCAGTG 451
||||| ||||| || || || | ||| || |||| | | | |||||| | ||||||||
Sbjct 419 CTGTTATTGGCTCGGAAAGTAACGTTGTTGAGAGCAGT-GATGTACATGGTGGCTCAGTG 477
Query 452 TCTTGGAGCCATTTGTGGTGTGGGTTTCGTGAAAG-CTTTC-ATGAAAACTCCTTACAAC 509
|| || |||||||||||||||| ||| || || | | ||| | | || ||||| |
Sbjct 478 CCTCGGTGCCATTTGTGGTGTGGCTTTGGTCAA-GTCCTTCCA-GT---CTGCTTACTAT 532
Query 510 A-CT-CTT-GGTGGAGGAGCTAACACCGTAGCT--GACGGTTACAGCAAAGGAACTGCTC 564
| | || ||||| || || || || || || || ||||| |||| || || | |
Sbjct 533 AACCGCTACGGTGGCGGCGC-AA-ACGGTCTCTCCGATGGTTATAGCATCGGCACCGGTG 590
Query 565 TCGGAGCTGAGATTATTGGAACTTTCGTCCTT-GTTTACACCGTTTTCTCTGCAACTGAC 623
| | || ||||| || || || |||||| || || |||||||| |||||||| ||||||
Sbjct 591 TTGCCGCCGAGATCATAGGTACATTCGTC-TTAGTCTACACCGTCTTCTCTGCCACTGAC 649
Query 624 CCTAAGAGAAGCGCTCGTGACTCTCACATCCCCGT------T-T-T-GGCTCCACTT-CC 673
|| ||||| || || |||||||||||| |||| || | | | |||||| || ||
Sbjct 650 CCCAAGAGGAGTGCGCGTGACTCTCACGTCCCTGTAAGCCCTGTATTGGCTCCT-TTACC 708
Query 674 AATTGGATTTGCTGTGTTCATGGTGCATTTGGCTACTATCCCCATTACTGGAACTGGTAT 733
|||||||||||| |||||||| || || || ||||| ||||| || || || ||||| ||
Sbjct 709 AATTGGATTTGCAGTGTTCATCGTTCACTTAGCTACAATCCCAATCACGGGCACTGGCAT 768
Query 734 CAACCCAGCTAGAAG-CTTTGGTGCTGCTGTTATCTACAACAACGAGAAGGCGTGGGATG 792
||||| || ||||| || || ||||| | ||||||||||| || || || ||||||
Sbjct 769 TAACCCTGCAAGAAGTCTC-GGAGCTGCAATCATCTACAACAAGGACAAAGCTTGGGATC 827
Query 793 ACCAATGGATCTTTTGGGTTGGTCCGTT 820
| || ||||| || ||||| ||||||||
Sbjct 828 ATCATTGGATATTCTGGGTGGGTCCGTT 855
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 45061287894
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5