BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT4G35290.2 Length=3205 Score E Sequences producing significant alignments: (Bits) Value Ahg491120 jgi|Araly1|491120|fgenesh2_kg.7__553__AT4G35290.1 4444 0.0 Ahg906549 jgi|Araly1|906549|Al_scaffold_0003_3677 2019 0.0 > Ahg491120 jgi|Araly1|491120|fgenesh2_kg.7__553__AT4G35290.1 Length=2998 Score = 4444 bits (2406), Expect = 0.0 Identities = 2750/2914 (94%), Gaps = 31/2914 (1%) Strand=Plus/Plus Query 222 GGAACTGATTAAGCCAAAGCTATGTTTTGGGTTTTGGTTCTGTTGAGCTTCATTGTTCTT 281 ||||||| |||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct 89 GGAACTGGTTAAACCAAAACAATGTTTTGGGTTTTGGTTCTGTTGAGCTTCATTGTTCTT 148 Query 282 ATTGGTGATGGGATGATTTCAGAGGGAGCTGGTTTAAGGCCTCGTTATGTTGATGTTGGA 341 ||||||||||||| |||||||||||||| || ||||||||||||||||||||||||| Sbjct 149 CTTGGTGATGGGATTATTTCAGAGGGAGC---TTCAAGGCCTCGTTATGTTGATGTTGGA 205 Query 342 GCAATATTCAGTTTAGGGACTTTACAGGGTGAAGTTACAAATATTGCTATGAAAGCTGCA 401 |||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||| Sbjct 206 GCAATATTCAGTTTAGGGACTTTACATGGTGAAGTTACAAATATTGCCATGAAAGTTGCA 265 Query 402 GAGGAAGATGTAAATTCTGATCCTAGCTTCCTTGGTGGATCAAAATTGCGTATAACGACG 461 |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 266 GAGGGTGATGTAAATTCTGATCCTCTCTTCCTTGGTGGATCAAAATTGCGTATAACGACG 325 Query 462 TATGATGCAAAGCGTAATGGATTCCTCACCATCATGGGAGCTTTGCAATTCATGGAGACT 521 |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 326 TATGATGCCAAGCGTAATGGATTCCTCACCATCATGGGAGCATTGCAATTCATGGAGACT 385 Query 522 GATGCTGTGGCTATCATTGGTCCTCAGACATCAATAATGGCTCATGTACTGTCTCATCTT 581 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 386 GATGCTGTGGCTATCATTGGTCCTCAGACATCAATAATGGCTCATGTTCTGTCTCATCTT 445 Query 582 GCAAATGAGCTTAGTGTGCCTATGTTGTCATTCACAGCTTTAGACCCTAGTCTCTCGGCG 641 |||||||||||||||||||||||| |||||||||| |||||||||||||| || |||||| Sbjct 446 GCAAATGAGCTTAGTGTGCCTATGCTGTCATTCACGGCTTTAGACCCTAGCCTATCGGCG 505 Query 642 CTTCAGTTCCCGTTCTTTGTCCAGACAGCACCTAGTGATCTCTTTCTGATGCGTGCCATT 701 || |||||||||||||||||||| ||||||||||| ||||||||| | |||||||||||| Sbjct 506 CTCCAGTTCCCGTTCTTTGTCCAAACAGCACCTAGCGATCTCTTTTTAATGCGTGCCATT 565 Query 702 GCGGAAATGATAAGTTACTACGGTTGGTCAGAGGTGATTGCATTGTATAATGATGATGAC 761 |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| Sbjct 566 GCGGAAATGATAAGTTACTACGGTTGGTCAGAGGTGGTTGCATTGTACAATGATGATGAC 625 Query 762 AACAGTAGAAACGGTATAACAGCTTTAGGCGATGAGCTCGAAGGAAGGCGCTGCAAGATT 821 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 626 AACAGTAGAAACGGTATAACAGCCTTAGGCGATGAGCTCGAAGGAAGGCGCTGCAAGATT 685 Query 822 TCATACAAGGCTGTGCTTCCTTTGGATGTGGTGATTACGAGTCCTCGTGAGATTATAAAT 881 ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || Sbjct 686 TCATACAAGGCTGTGCTTCCTTTGGATGTGGTGATTACGAGTCCTCGTGAGATCATTGAT 745 Query 882 GAGTTGGTTAAGATTCAAGGGATGGAATCTCGGGTAATCATTGTGAACACTTTCCCTAAA 941 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | Sbjct 746 GAGTTGGTTAAGATTCAAGGGATGGAATCTCGGGTTATCATTGTGAACACTTTCCCTAGA 805 Query 942 ACAGGTAAGAAAATCTTTGAGGAAGCCCAGAAGCTTGGCATGATGGAGAAAGGCTATGTT 1001 ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 806 ACAGGTAGGATGATCTTTGAGGAAGCCCAGAAGCTTGGCATGATGGAGAAAGGCTATGTT 865 Query 1002 TGGATAGCTACAACTTGGTTGACTTCTCTGTTAGATTCTGTTAACCCGTTACCTGCCAAG 1061 |||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||| Sbjct 866 TGGATAGCTACAACTTGGTTGACTTCTCTGTTAGATTCAGTTAACCCGTTGCCTTCCAAG 925 Query 1062 ACTGCTGAATCTCTTAGAGGCGTGCTTACTCTTCGTATTCACACGCCAAATTCaaaaaag 1121 | |||||||||||||||||| ||||| ||||||||||||||||| |||||||||| |||| Sbjct 926 AATGCTGAATCTCTTAGAGGAGTGCTCACTCTTCGTATTCACACACCAAATTCAAGAAAG 985 Query 1122 aaaaaaGATTTCGTGGCACGGTGGAACAAGTTGAGTAACGGGACTGTCGGTTTAAACGTT 1181 ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 986 AAAAAAGATTTTGTGGCACGGTGGAACAAGTTGAGTAATGGGACTGTCGGTTTAAACGTT 1045 Query 1182 TATGGTCTCTATGCTTATGATACTGTCTGGATCATTGCTCGAGCTGTTAAGAGACTTCTA 1241 ||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1046 TATGGACTTTATGCTTATGATACTGTCTGGATCATTGCTCGAGCTGTTAAGACACTTCTA 1105 Query 1242 GATAGCAGAGCTAACATTTCCTTCTCTAGTGACCCAAAGTTAACCAGCATGAAGGGAGGA 1301 |||||| ||||||| ||||||||||| || |||||||||||||||||||||| ||||||| Sbjct 1106 GATAGCGGAGCTAATATTTCCTTCTCGAGCGACCCAAAGTTAACCAGCATGACGGGAGGA 1165 Query 1302 GGGTCACTGAATCTAGGTGCATTGAGCATATTTGACCAAGGATCACAATTTCTTGATTAT 1361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1166 GGGTCACTGAATCTAGGTGCATTGAGCATATTTGACCAAGGATCACAATTTCTTGATTAT 1225 Query 1362 ATTGTGAATACAAATATGACTGGTGTTACAGGTCAAATACAGTTTCTTCCTGACAGATCA 1421 |||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||| Sbjct 1226 ATTGTGAATACAAACATGACTGGTCTTACAGGTCAAATACACTTTCTTCCTGACAGATCA 1285 Query 1422 ATGATACAGCCCTCATATGACATCATAAACGTGGTTGATGACGGGTTTAGGCAGATAGGG 1481 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1286 ATGATACAGGCCTCATATGACATCATAAACGTGGTTGATGACGGGTTTAGGCAGATAGGG 1345 Query 1482 TATTGGTCTAACCATTCCGGGCTCTCTATTATACCTCCAGAGTCACTATACAAAAAGCTT 1541 ||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||| | Sbjct 1346 TATTGGTCTAACCATTCTGGGCTCTCTATTATACCTCCTGAGTCACTATACAATAAGCCT 1405 Query 1542 TCAAATCGTTCGAGCTCAAACCAACATCTGAACAATGTGACTTGGCCTGGTGGGACTTCT 1601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1406 TCAAATCGTTCGAGCTCAAACCAACATCTGAACAATGTGACTTGGCCTGGTGGGACTTCT 1465 Query 1602 GAGACACCACGTGGTTGGGTTTTTCCTAACAACGGGAGACGATTGAGAATCGGTGTACCC 1661 | ||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1466 GTGACGCCACGTGGATGGGTTTTTCCTAACAACGGGAGAAGATTGAGAATCGGTGTACCC 1525 Query 1662 GATAGAGCAAGTTTTAAGGAGTTTGTGTCAAGGTTGGATGGAAGCAACAAAGTGCAAGGG 1721 |||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||| Sbjct 1526 GATAGAGCAAGTTTCAAGGAATTTGTGTCAAGGGTGGATGGAAGCAACAAAGTGCAAGGG 1585 Query 1722 TATGCCATTGATGTCTTTGAAGCTGCGGTAAAACTGATTTCTTATCCGGTTCCTCATGAG 1781 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1586 TATGCCATTGATGTCTTTGAAGCTGCGGTAAAACTGATTTCTTATCCGGTTCCTCATGAG 1645 Query 1782 TTCGTCCTATTTGGAGACGGTCTCAAGAACCCAAACTTCAATGAATTTGTCAACAATGTC 1841 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1646 TTCGTCCTTTTTGGAGACGGTCTCAAGAACCCAAACTTCAATGAATTTGTCAACAATGTC 1705 Query 1842 ACTATTGGGGTATTTGATGCTGTTGTAGGAGACATAGCTATTGTTACGAAACGAACAAGG 1901 |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1706 ACTACCGGGGTATTTGATGCTGTTGTAGGAGACATAGCTATTGTTACAAAACGAACAAGG 1765 Query 1902 ATTGTGGATTTCACTCAGCCTTACATAGAATCAGGGCTTGTCGTGGTTGCTCCTGTCACA 1961 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1766 ATTGTGGATTTCACTCAGCCATACATAGAATCAGGGCTTGTCGTGGTTGCTCCTGTCACA 1825 Query 1962 AAGCTAAATGATACTCCGTGGGCGTTTTTACGCCCTTTTACACCTCCAATGTGGGCTGTT 2021 |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1826 AAGCTAAACGATACTCCGTGGGCGTTCTTACGCCCTTTTACACCTCCAATGTGGGCTGTT 1885 Query 2022 ACAGCAGCTTTTTTCCTCATCGTTGGATCAGTAATATGGATTCTTGAACATAGAATCAAC 2081 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1886 ACAGCAGCCTTTTTCCTCATCGTTGGATCAGTAATATGGATTCTTGAACATAGAATCAAC 1945 Query 2082 GATGAGTTCCGCGGACCTCCAAGGAAACAAATTGTTACTATTCTCTGGTT------CAGC 2135 |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1946 GATGAGTTCCGCGGACCTCCAAGGAAACAAATTGTTACTATTCTCTGGTTAGTAAACAGC 2005 Query 2136 TTCTCCACGATGTTTTTCTCCCACAGAGAGAACACAGTGAGTACACTCGGTCGTGCTGTT 2195 |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 2006 TTCTCCACAATGTTTTTCTCCCACAGAGAGAACACAGTGAGCACACTCGGTCGTGCTGTG 2065 Query 2196 CTGCTCATCTGGCTATTTGTGGTACTAATCATAACATCAAGCTACACAGCGAGTCTTACA 2255 ||||| |||||||||||||||||||| || ||||| |||||||||||||||||||||||| Sbjct 2066 CTGCTGATCTGGCTATTTGTGGTACTGATTATAACTTCAAGCTACACAGCGAGTCTTACA 2125 Query 2256 TCGATTCTTACAGTGCAACAGCTAAACTCACCAATCAGAGGAGTAGACACACTCATCAGC 2315 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 2126 TCGATTCTTACAGTGCAACAGCTAAACTCACCGATCAGAGGAGTAGACACACTCATCAGC 2185 Query 2316 AGCAGTGGACGAGTTGGGTTTCAGGTAGGTTCTTATGCAGAAAACTACATGATTGATGAG 2375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2186 AGCAGTGGACGAGTTGGGTTTCAGGTAGGTTCTTATGCAGAAAACTACATGATTGATGAG 2245 Query 2376 CTTAACATTGCCAGATCCAGACTTGTACCACTCGGCTCTCCTAAAGAATACGCTGCAGCT 2435 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2246 CTTAACATCGCCAGATCCAGACTTGTACCACTCGGCTCTCCTAAAGAATACGCTGCAGCT 2305 Query 2436 CTTCAAAACGGAACTGTTGCTGCAATTGTTGATGAGCGTCCTTACGTTGATCTCTTCCTC 2495 ||||||||||||||||||||||||||||| ||||| || |||||| |||||||||||||| Sbjct 2306 CTTCAAAACGGAACTGTTGCTGCAATTGTCGATGAACGCCCTTACATTGATCTCTTCCTC 2365 Query 2496 TCAGAATTCTGCGGATTTGCCATTAGAGGCCAAGAATTCACCAGAAGTGGCTGGGGATTT 2555 || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2366 TCGGAATTTTGCGGATTTGCCATTAGAGGCCAAGAATTCACCAGAAGTGGCTGGGGATTT 2425 Query 2556 GCATTTCCAAGAGACTCTCCATTAGCAATCGACATGTCAACCGCGATCTTAGGTCTATCA 2615 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 2426 GCATTTCCAAGAGACTCTCCATTAGCAGTCGACATGTCAACCGCGATCTTAGGTCTATCT 2485 Query 2616 GAAACCGGACAGCTTCAAAAGATCCATGACAAGTGGCTTTCAAGATCTAACTGCAGTAAC 2675 || || ||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 2486 GAGACGGGACAGCTTCAAAAGATTCATGACAAGTGGCTTTCAAGATCTAACTGCAGTAAC 2545 Query 2676 CTCAACGGTTCAGTGTCAGATGAAGATTCAGAACAGCTTAAACTCCGAAGCTTCTGGGGA 2735 | || ||||||| ||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct 2546 CAGAAGGGTTCAGAGTCAGATGAGGATTCAGAACAGCTTAAACTCCGTAGCTTCTGGGGA 2605 Query 2736 TTATTCCTTGTGTGTGGGATCTCTTGTTTTATCGCTCTCTTCATCTACTTCTTCAAGA-T 2794 ||||||||||||||||||||| |||||||||||||||| |||||||||||||||| || | Sbjct 2606 TTATTCCTTGTGTGTGGGATCGCTTGTTTTATCGCTCTTTTCATCTACTTCTTCA-GAAT 2664 Query 2795 AGTCCGCGACTTCTTCCGCCACGGCAAATATGATGAAGAAGCCACAGTACCTTCACCAGA 2854 |||||||||||||| |||||| |||| ||| |||||||| ||||||||||||||||| Sbjct 2665 AGTCCGCGACTTCTGGCGCCACAGCAAGCCTGAGGAAGAAGCTACAGTACCTTCACCAGA 2724 Query 2855 AAGTTCACGTTCTAAATCATTGCAGACATTTCTAGCTTATTTTGATGAAAAAGAAGACGA 2914 |||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||| || Sbjct 2725 AAGTTCACGTTCTAAAACATTGCAGAGATTTTTAGCTTATTTTGATGAAAAAGAAGAAGA 2784 Query 2915 ATCCAAGAGAAGGATGAAGCGTAAACGAAACGATGATCTTTCTTTAAAGCCTTCTAGACC 2974 | ||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 2785 AACCAAGAGAAGGTTGAAGCGTAAGCGAAACGATGATCTTTCTTTACGGCCTTCTAGACC 2844 Query 2975 AATATGACAGATCCATCAAGACTCAAGCATGAAAGATGAAGAAATGCAGACACACATACC 3034 ||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 2845 GGTATGACAGATCCATCAATACTCAAGCATGAAAGATGAAGAAATGCAGACACA------ 2898 Query 3035 TCATACTTATATAGTAGAATGCAGATTTTGATTTTAACTGTACTTCAAGAATAAGCCTTG 3094 ||||||||||||| |||||| |||| |||||||||||||| ||||| Sbjct 2899 -------------GTAGAATGCAGATATTGATTGAAACTATACTTCAAGAATAAACCTTG 2945 Query 3095 AAG-AATACGGAACATTTTTTAACCAAAGAAAGT 3127 ||| ||||| |||||||||||||||| ||||||| Sbjct 2946 AAGGAATACTGAACATTTTTTAACCACAGAAAGT 2979 > Ahg906549 jgi|Araly1|906549|Al_scaffold_0003_3677 Length=2766 Score = 2019 bits (1093), Expect = 0.0 Identities = 2240/2777 (81%), Gaps = 146/2777 (5%) Strand=Plus/Plus Query 257 GGTTCTGTTGAGCTTCATTGTTCTTATTGGTGATGGGATG--A-TTTCAGAGGGAG---C 310 |||||| | |||||| || || || |||||| |||| || | |||||||||||| | Sbjct 9 GGTTCTATGGAGCTTTGTTATTGTTCTTGGTGGTGGGTTGTTACTTTCAGAGGGAGCTTC 68 Query 311 TGGTT-TAAGGCCT-C-GTTATGTTGATGTTGGAGCAATATTCAGTTTAGGGA-C-TTTA 365 | ||| | |||||| | |||| || | ||||| || ||||| ||||| | | | || Sbjct 69 TAGTTCT-AGGCCTCCTGTTA--TTAAAGTTGGTGCTATATTTGGTTTAAACACCATGTA 125 Query 366 CAGGGTGAAGTTACAAATATTG-CTATGAAAGCTGCAGAGGAAGATGTAAATTCTGATCC 424 | |||||| | | ||||| | || | |||||||| ||||||||||| ||||| ||||| Sbjct 126 C--GGTGAAACTGCGAATATCGCCT-TTAAAGCTGCTGAGGAAGATGTCAATTCCGATCC 182 Query 425 TAGCTTCCTTGGTGGATCAAAATTGC-GTATAACGACGTATGATGC-AAAGCGTAATGGA 482 ||||||||| |||||||| || |||| | || || | ||||||| ||| || | |||| Sbjct 183 TAGCTTCCTCGGTGGATCGAAGTTGCAG-ATTTTGATGAATGATGCTAAA-CGCAGTGGA 240 Query 483 TTCCTCACCATCATGGGAGCTTTGCAATTCATGGAGACTGATGCTGTGGCTATCATTGGT 542 ||||||| |||||||||||| |||||||||||||||||| |||| ||||| || |||||| Sbjct 241 TTCCTCAGCATCATGGGAGCATTGCAATTCATGGAGACTAATGCAGTGGCGATAATTGGT 300 Query 543 CCTCAGACATCAATAATGGCTCATGTACTGTCTCATCTTGCAAATGAGCTTAGTGTGCCT 602 || ||||||||||||||||||||||| ||||||||||||| |||||||||| ||| || Sbjct 301 CCACAGACATCAATAATGGCTCATGTGTTGTCTCATCTTGCCAATGAGCTTACTGTTCCG 360 Query 603 ATGTTGTCATTCACAGCT-TTAGACCCTAGTCTCTCGGCGCTTCAGTTCCCGTTCTTTGT 661 ||||||||||| || ||| || || |||| || || | || || ||||| |||||||| Sbjct 361 ATGTTGTCATTTACGGCTCTT-GATCCTACCCTGTCTCCACTCCAATTCCCATTCTTTGT 419 Query 662 CCAGACAGCACCTAGTGATCTCTTTCTGATGCGTGCCATTGCGGAAATGATAAGTTACTA 721 ||| ||||||||||||||||| ||||||||||| |||||||| || ||||| | ||||| Sbjct 420 CCAAACAGCACCTAGTGATCTGTTTCTGATGCGCGCCATTGCAGAGATGATTACATACTA 479 Query 722 CGGTTGGTCAGAGGTGATTGCATTGTATAATGATGATGACAACAGTAGAAACGGTATAAC 781 ||||||||||| ||| | ||||| ||||| |||||||| ||||| ||||| || | || Sbjct 480 TGGTTGGTCAGATGTGGTGGCATTATATAACGATGATGATAACAGCAGAAATGGCGTTAC 539 Query 782 AGCTTTAGGCGATGAGCTCGAAGGA-AGGCGCTGCAAGATTTCATACAAGGCTGTGCTTC 840 ||| |||||||||||||| ||| || |||||||||| |||||| ||||||||||| |||| Sbjct 540 AGCGTTAGGCGATGAGCTTGAA-GAGAGGCGCTGCAGGATTTCTTACAAGGCTGTACTTC 598 Query 841 CTTTGGATGTGGTGATTACGAGTCCTCG-TGAGATTATAAATGAGTTGGTTAAGATTCAA 899 | |||||||| |||||||| ||||| | |||||||||| | |||||| |||||| || Sbjct 599 CGTTGGATGTTGTGATTACTAGTCC-AGTTGAGATTATAGAGGAGTTGATTAAGA-TCCG 656 Query 900 GGG-ATGGAATCTCGGGTAATCATTGTGAACACTTTCCCTAAA-ACAGGTAAGAAAATCT 957 ||| |||||||||||||| |||||||||||||||||||| ||| ||||| |||| |||| Sbjct 657 GGGAATGGAATCTCGGGTTATCATTGTGAACACTTTCCC-AAATACAGGCAAGATGATCT 715 Query 958 TTGAGGAAGCCCAG-AAGCTT-GGCATGATGGAGAAAGGCTATGTTTGGATAGCTACAAC 1015 || |||||| ||| ||| || || ||||||||||||||||||||||||||||||||||| Sbjct 716 TTAAGGAAG--CAGAAAGATTAGGGATGATGGAGAAAGGCTATGTTTGGATAGCTACAAC 773 Query 1016 TTGGTTGACTTCTCTGTTAGATTC-TGTTAACCCGTTACCTGCCAAGACTGCTGAATCTC 1074 ||||||| |||||||| ||||||| || || || | |||| | | | | ||| Sbjct 774 TTGGTTGTCTTCTCTGCTAGATTCAAATT-TTCCTTTGGATACCAA-A-T--T--A-CTC 825 Query 1075 TTAGA-GGCGTGCTTACTCTTCGTATTCACACGCCA-AATTCaaaaaagaaaaaaGA-TT 1131 | | || || || || || ||| |||| |||||| || || | |||||| | || || Sbjct 826 --A-ATGGAGTTCTAACACTGCGTCTTCATACGCCAGAA-TCGAGAAAGAAGAGGGACTT 881 Query 1132 TCGTGGCACGGT-G--GAACAAGTTGAG---TAACGGGACTGTCGGTTTAAACGTTTATG 1185 | | ||||||| | |||||||||||| ||| |||| | || || || || |||| Sbjct 882 T-GCAGCACGGTGGAAGAACAAGTTGAGTAATAATAAGACTATTGGGTTGAATGTCTATG 940 Query 1186 GTCTCTATGCTTATGATACTGTCTGGATCATTGCTCGAGCTGTTAAGAGACTTCTAGATA 1245 |||| ||||||||||||||||||||||||||||||||||| |||||| |||||| || | Sbjct 941 GTCTGTATGCTTATGATACTGTCTGGATCATTGCTCGAGCCATTAAGACACTTCTGGA-A 999 Query 1246 GCAG-AGCTAA-CATTTCCTTCTCTAGTGACCCAAAGTTAACCAGCATGAAGGGAGGAGG 1303 || | || ||| | |||||||||| ||||| |||||||| |||| |||| || | ||| Sbjct 1000 GCTGGAGGTAATC-TTTCCTTCTCCAGTGATGCAAAGTTAGGCAGCTTGAAAGGTG-AGG 1057 Query 1304 GTCACTGAATCTAGGTGCATTGAGCATATTTGACCAAGGATCACAATTTCTTGATTATAT 1363 || |||||||| ||||||| |||| |||||| |||||||||||| ||||||||||||| Sbjct 1058 --CATTGAATCTAAGTGCATTAAGCAGATTTGATCAAGGATCACAACTTCTTGATTATAT 1115 Query 1364 TGTGAATACAAATATGACTGGTGTTACAGGTCAAATACAGTTTCTTCCTGACAGATCAAT 1423 |||| ||||||| ||| | ||| | || |||| | || |||| ||| ||||||||||| Sbjct 1116 TGTGCATACAAAGATGTCCGGTCTAACTGGTCCGGTTCAATTTCATCCAGACAGATCAAT 1175 Query 1424 GATACAGCCCTCATATGACATCATAAACGTGGTTGATGACGGGTTTAGGCAGATAGGGTA 1483 | |||| || |||||||| || || || ||||||||||| | ||| || ||||| || Sbjct 1176 GCTACATCCTTCATATGATATTATCAATTTGGTTGATGACAGCATTAACCAAATAGGTTA 1235 Query 1484 TTGGTCTAACCATTCCGGGCTCTCTATTATACCTCCAGAGTCACTATACAA-AAAGCTTT 1542 ||||||||| |||| || || |||||| |||| || || ||| | |||| ||| || Sbjct 1236 CTGGTCTAACTATTCTGGTCTTTCTATTGTACCGCCTGAATCATTTTACAGCAAACCTC- 1294 Query 1543 CAAATCGTTCGAGCTCAAACCAACATCTGAACAATGTGACTTGGCCTGGTGGGACTTCTG 1602 | || | ||| ||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct 1295 CTAACCATTCTAGCTCAAACCAACATCTGAACTCTGTAACTTGGCCTGGTGGGACTTCA- 1353 Query 1603 AG-ACACCACGTGGTTGGGTTTTTCCTAACAACGGGAGACGATTGAGAATCGGTGTACCC 1661 | ||||| || || |||||||||| |||||| || || || |||||||||||||| || Sbjct 1354 ATTACACCTCGCGGATGGGTTTTTCGTAACAATGGAAGGCGGTTGAGAATCGGTGTTCCT 1413 Query 1662 GATAGAGCAAGTTTTAAGGAGTTTGTGTCAAG-GTTGGATGGAAG---CAACAAAGTGCA 1717 ||||||||||| || ||||| ||||| ||||| || ||||||| ||||||||| || Sbjct 1414 GATAGAGCAAGCTTCAAGGACTTTGTCTCAAGAGTCA-ATGGAAGTAGCAACAAAGTACA 1472 Query 1718 AGGGTAT-GCCATTGATGTCTTTGAAGCTGCGGTAAAACTGATTTCTTATCCGGTTCCTC 1776 || ||| || |||||||| |||||||||||||| |||||| |||||||||||||||||| Sbjct 1473 CGGATATTGC-ATTGATGTATTTGAAGCTGCGGTGAAACTGCTTTCTTATCCGGTTCCTC 1531 Query 1777 ATGAGTTCGTCCTATTT-GGAGACGGTCTCAA-GAACCCAAACTTCAATGAATTTGTCAA 1834 | |||||| || | ||| ||||| ||||| || ||| ||||||| |||||| | ||||| Sbjct 1532 ACGAGTTCATCTT-TTTCGGAGATGGTCT-AACGAATCCAAACTACAATGAGCTGGTCAA 1589 Query 1835 CAATGTCACTATTGGGGT--A-TTTGATGCTGTTGTAGGAGACATAGCTATTGTTACGAA 1891 ||| ||||||| |||||| | ||||||||||||||||| |||||||| ||||| || || Sbjct 1590 CAAGGTCACTACTGGGGTGGACTTTGATGCTGTTGTAGGCGACATAGCCATTGTCACCAA 1649 Query 1892 ACGAAC-AAGGATTGTGGATTTCACTCAGCCTTACATAGAATCAGGGCTTGTCGTGGTTG 1950 || || ||| |||||||||||||| ||||| ||||| || ||||| || ||||| |||| Sbjct 1650 GCGGACCAAG-ATTGTGGATTTCACCCAGCCATACATTGAGTCAGGCCTCGTCGTTGTTG 1708 Query 1951 CTCCTGTCACAA-AGCTAAATGATACTCCGTGGGCGTTTTTACGCCCTTTTACACCTCCA 2009 |||||||||||| | || || || | ||| ||||| ||||||||||| ||||| | ||| Sbjct 1709 CTCCTGTCACAAGA-CTTAACGACAATCCTTGGGCCTTTTTACGCCCGTTTACTCTTCCT 1767 Query 2010 ATGTGGGCTGTTACAGCAGCTTTTTTCCTCATCGTTGGATCAGTAATATGGATTCTTGAA 2069 |||||||| || |||||| |||||||| | || |||||| | | |||||||||||||||| Sbjct 1768 ATGTGGGCAGTAACAGCATCTTTTTTCGTTATTGTTGGAGCTGCAATATGGATTCTTGAA 1827 Query 2070 CATAGAATCAACGATGAGTTCCGCGGACCTCCAAGGAA-ACAAATTGTTACTATTCTCTG 2128 || | || || |||||||| || || || ||||| || |||||| |||| |||||||| Sbjct 1828 CACCGTATAAATGATGAGTTTCGTGGTCCGCCAAG-AAGACAAATCATTACCATTCTCTG 1886 Query 2129 GTTCAGCTTCTCCACGATGTTTTTCTCCCACAGAGAGAAC-ACAGTGAGTACACTCGGTC 2187 ||||| ||| || ||||||||||||||||||||||||| | |||||||| || || |||| Sbjct 1887 GTTCACCTTTTCGACGATGTTTTTCTCCCACAGAGAGA-CTACAGTGAGCACGCTTGGTC 1945 Query 2188 GTGCTGTT-CTGCTCATCTGGCTATTTGTGGTACTAATCATAACATCAAGCTACACAGCG 2246 || || | || || || ||||| |||||||| || ||||| ||||| |||||||||||| Sbjct 1946 GTA-TGGTGCTTCTGATATGGCTTTTTGTGGTTCTGATCATTACATCTAGCTACACAGCG 2004 Query 2247 AGTCTTACATCGATTCTTACAGTGCAACAGCTAAACTCACCAATCAGAGGAGTAGACACA 2306 |||||||||||||| ||||||||||||||||| || ||||| || | ||||||||| ||| Sbjct 2005 AGTCTTACATCGATACTTACAGTGCAACAGCTCAATTCACCTATAAAAGGAGTAGATACA 2064 Query 2307 CTCATCAGCAGCAGTGGACG-AGTTGGGTTTCAGGTAGGTTCTTATGCAGAAAACTACAT 2365 |||||||| |||||||| || | |||| || ||||| ||||||| ||| ||||||||||| Sbjct 2065 CTCATCAGTAGCAGTGGTCGTA-TTGGCTTCCAGGTTGGTTCTTTTGCTGAAAACTACAT 2123 Query 2366 GATTGATGAGCTTAACATTGCCAGATCCAGACTTGTACCACTCGGCTCTCCTAAAGAATA 2425 || |||||||||||||||||||||||||||||||| || |||| ||||||| | ||||| Sbjct 2124 GACCGATGAGCTTAACATTGCCAGATCCAGACTTGTGCCTCTCGCCTCTCCTGAGGAATA 2183 Query 2426 CGCTGCA-GCTCTTCAAAACGGAACTGTTGCTGCAATTGTTGATGAGCGTCCTTACGTTG 2484 ||| | || |||||||| || ||||||||||||||||||||||| |||||||| ||| Sbjct 2184 TGCTA-ATGCACTTCAAAATGGTACTGTTGCTGCAATTGTTGATGAACGTCCTTATATTG 2242 Query 2485 ATCTCTTCCTCTCAGAATT-CTGCG-GATTTGCCATTAGAGGCCAAGAATTCACCAGAAG 2542 |||||||||| ||| |||| ||| | |||||||| ||||||||||||||||||||| | Sbjct 2243 ATCTCTTCCTTTCA-AATTACTGTAAG-TTTGCCATCAGAGGCCAAGAATTCACCAGATG 2300 Query 2543 TGGCTGGGGATTTGCATTTCCAAGAGACTCTCCATTAGCAATCGACATGTCAACCGCGAT 2602 || |||||||||||||| || ||||||||||| |||||| | ||||||||||||||||| Sbjct 2301 CGGTTGGGGATTTGCATTCCCGAGAGACTCTCCTTTAGCAGTTGACATGTCAACCGCGAT 2360 Query 2603 -CTTAGGTCTATCAGAAACCGGAC-AGCTTCAAAAGATCCATGACAAGTGGCTTTC-AAG 2659 ||| || ||||| ||||| || | | ||||| |||||||||||||| ||||| || || Sbjct 2361 TCTTGGG-CTATCCGAAACTGG-CGAACTTCAGAAGATCCATGACAAATGGCTGTCGAA- 2417 Query 2660 ATCTAACTGCAGTAACCT-CAACGG-T-TCAGTGTCAGATGAAGATTCAGAACAGCTTAA 2716 |||||||||||| | || || ||| | ||||| ||| ||| | |||||||||| || Sbjct 2418 ATCTAACTGCAGCAGCCCGCA-CGGGTCTCAGT--CAGGTGAC--T-CAGAACAGCTCAA 2471 Query 2717 AC-TCCGA-AGCTTCTGGGG-ATTATTCCTTGTGTGT-GGGATCTCTTGTTTTATCGCTC 2772 | | | | ||||||||||| || ||||||||| || ||||| | ||| | |||||| Sbjct 2472 -CGTGC-ATAGCTTCTGGGGCATG-TTCCTTGTG-GTTGGGATAGCCTGTCTCGTCGCTC 2527 Query 2773 TCTTCATCTACTTCTTCAAGATAGTCCGCGACTTCTTCCG-C-CACGGCA--AA-TATGA 2827 |||| ||| |||||||||| |||||||||||||||| | | ||| || || || || Sbjct 2528 TCTTTATCCACTTCTTCAAAATAGTCCGCGACTTCTGCAAACACACA-CATGAAGTA-GA 2585 Query 2828 TGAAGAAGCCA-C-AGTACCTTCACCAGAAAG-TTCACGTTCT-A-AAT-CATTGCAGAC 2881 ||||||| | | | ||||||||||| |||| |||||||| | | || | | ||||| Sbjct 2586 AGAAGAAGA-AGCTA-TACCTTCACCA-AAAGCTTCACGTT-TGACAAAGC-TA-CAGAC 2639 Query 2882 ATTTCTAGCTTATT-TTGATGAAAAAGAAGACGAATCCAAGAGAAGGATGAAGCGTAAAC 2940 |||||||| | || ||||||| |||||||| ||| | ||| ||||| | ||||| ||| Sbjct 2640 TTTTCTAGCAT-TTGTTGATGAGAAAGAAGAAGAAACAAAGCGAAGGTTCAAGCGCAAAA 2698 Query 2941 GAAACGATGATCTTTCT 2957 ||||| | ||||||||| Sbjct 2699 GAAACAACGATCTTTCT 2715 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 121088888855 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5