BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G35300.1
Length=2590
Score E
Sequences producing significant alignments: (Bits) Value
Ahg491117 jgi|Araly1|491117|fgenesh2_kg.7__550__AT4G35300.2 4095 0.0
Ahg472320 jgi|Araly1|472320|fgenesh2_kg.1__2274__AT1G20840.1 220 3e-56
Ahg898048 jgi|Araly1|898048|Al_scaffold_0005_2014 182 1e-44
> Ahg491117 jgi|Araly1|491117|fgenesh2_kg.7__550__AT4G35300.2
Length=2637
Score = 4095 bits (2217), Expect = 0.0
Identities = 2413/2506 (96%), Gaps = 20/2506 (1%)
Strand=Plus/Plus
Query 99 GTGGATTTTGTTTCACTCACTCATCGTCGTTGATCAGTGACTCTGTTTTTGCGAAATTCT 158
|||| |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 136 GTGGGTTTTGTCTCACTCACTCATCGTCGTTGATCAGTGACTCTG-TTTTGCGAAATTCT 194
Query 159 CTTCAGATTTCTTGATAAAAGATAGAAGACGGAATTATGAGTGGAGCTGTGCTTGTTGCT 218
|||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct 195 CTTCAGATTTCTTGATAAAAGATATAAGACGGAATCATGAGTGGAGCTGTGCTTGTTGCT 254
Query 219 ATTGCTGCTGCTGTTGGCAACTTGTTACAAGGATGGGATAACGCAACTATTGCAGGAGCT 278
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 255 ATCGCTGCTGCTGTTGGCAACTTGTTACAAGGATGGGATAACGCAACTATTGCAGGAGCT 314
Query 279 GTGTTGTACATAAAAAAGGAGTTTAATTTGGAGAGTAATCCATCAGTGGAAGGTCTAATT 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 315 GTGTTGTACATAAAAAAGGAGTTTAATTTGGAGAGTAATCCATCAGTGGAAGGTCTAATT 374
Query 339 GTGGCGATGTCACTTATTGGTGCTACTCTGATTACAACATGCTCTGGAGGGGTAGCTGAT 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 375 GTGGCGATGTCACTTATTGGTGCTACTCTGATTACAACATGCTCTGGAGGGGTAGCTGAT 434
Query 399 TGGCTTGGTCGCCGTCCCATGCTAATATTGTCCTCAATTCTCTACTTTGTTGGTTCTCTA 458
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 435 TGGCTTGGTCGCCGTCCGATGCTAATATTGTCCTCAATTCTCTACTTTGTTGGTTCTCTA 494
Query 459 GTAATGCTATGGTCTCCGAATGTTTATGTGTTGCTCTTAGGAAGGTTGTTAGATGGATTT 518
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct 495 GTAATGCTATGGTCTCCAAACGTTTATGTGTTGCTCTTAGGAAGGTTGTTAGATGGATTT 554
Query 519 GGGGTTGGTCTTGTGGTCACACTTGTTCCTATTTATATATCTGAGACTGCACCACCTGAG 578
||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 555 GGGGTTGGTCTTGTGGTCACACTTGTTCCTATTTATATATCCGAGACTGCACCTCCTGAG 614
Query 579 ATTAGGGGACTGTTGAATACGCTACCGCAGTTCACTGGCTCTGGAGGGATGTTCTTATCT 638
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 615 ATTAGGGGACTGTTGAATACGCTTCCGCAGTTCACTGGCTCTGGAGGGATGTTCTTATCG 674
Query 639 TACTGTATGGTTTTCGGAATGTCGTTGATGCCATCACCTAGCTGGAGATTGATGCTTGGT 698
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 675 TACTGTATGGTTTTCGGAATGTCGTTGATGCCATCTCCTAGCTGGAGATTGATGCTTGGT 734
Query 699 GTCCTTTTCATCCCTTCCCTTGTCTTTTTCTTCCTCACGGTCTTCTTCTTGCCCGAGTCC 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 735 GTCCTTTTCATCCCTTCCCTTGTCTTTTTCTTCCTCACGGTCTTCTTCTTGCCCGAGTCC 794
Query 759 CCAAGGTGGCTCGTGAGCAAAGGTCGAATGCTTGAAGCAAAGCGGGTTCTTCAGAGACTG 818
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 795 CCAAGGTGGCTCGTGAGCAAAGGTCGAATGCTTGAAGCAAAGCGGGTTCTTCAGAGACTA 854
Query 819 CGTGGTCGCGAAGATGTGTCTGGTGAGATGGCTTTGTTGGTTGAGGGTCTTGGAATTGGA 878
||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct 855 CGTGGTCGCGAAGATGTTTCTGGTGAGATGGCTCTGTTGGTTGAGGGTCTTGGAATTGGA 914
Query 879 GGTGAAACAACCATAGAGGAATATATAATTGGTCCCGCGGATGAAGTTACTGATGATCAT 938
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 915 GGTGAAACAACAATAGAGGAATATATAATTGGTCCTGCGGATGAAGTTACTGATGATCAT 974
Query 939 GATATAGCTGTGGATAAGGATCAAATTAAGTTATATGGTGCAGAAGAAGGGCTGAGTTGG 998
||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct 975 GATATAGCTGTGGATAAGGATCAAATTAAATTGTATGGTGCAGAAGAAGGGCTGAGTTGG 1034
Query 999 GTTGCTAGGCCAGTCAAAGGAGGAAGCACTATGAGTGTTTTGTCTCGCCATGGAAGTACA 1058
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1035 GTTGCTAGGCCAGTCAAAGGAGGAAGCACTATGAGCGTTTTGTCTCGCCATGGAAGTACA 1094
Query 1059 ATGAGCAGGAGGCAAGGCTCATTGATTGATCCTCTTGTCACACTGTTTGGGAGCGTTCAC 1118
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1095 ATGAGCAAGAGGCAAGGCTCATTGATTGATCCTCTTGTCACACTGTTTGGGAGCGTTCAC 1154
Query 1119 GAGAAGATGCCGGACACTGGAAGCATGAGGAGTGCCTTGTTCCCACATTTTGGGAGTATG 1178
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1155 GAGAAGATGCCAGACACTGGAAGCATGAGGAGTGCCTTGTTCCCACATTTTGGGAGTATG 1214
Query 1179 TTCAGTGTTGGAGGGAATCAACCAAGACATGAAGATTGGGATGAAGAGAATCTTGTTGGA 1238
|||||||| |||||||||||||| ||| ||||||| ||||||||||||||||||||||||
Sbjct 1215 TTCAGTGTGGGAGGGAATCAACCGAGAAATGAAGACTGGGATGAAGAGAATCTTGTTGGA 1274
Query 1239 GAAGGTGAGGATTATCCATCCGACCATGGAGATGATTCTGAAGATGATCTTCATTCTCCG 1298
|||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1275 GAAGGTGACGATTATCCATCCGACCATGGAGATGATTCTGATGATGATCTTCATTCTCCG 1334
Query 1299 TTGATCTCACGTCAAACGACAAGCATGGAGAAAGACATGCCTCACACTGCTCATGGAACT 1358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1335 TTGATCTCACGTCAAACGACAAGCATGGAGAAAGACATGCCTCACACTGCTCATGGAACT 1394
Query 1359 CTTTCTACCTTCAGACATGGAAGTCAAGTGCAGGGAGCTCAAGGGGAAGGAGCGGGTAGT 1418
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1395 CTTTCTAACTTCAGACATGGAAGTCAAGTGCAGGGAGCTCAAGGGGAAGGAGCGGGTAGT 1454
Query 1419 ATGGGGATTGGAGGTGGATGGCAAGTGGCATGGAAATGGACGGAAAGAGAAGATGAATCG 1478
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1455 ATGGGGATTGGAGGTGGATGGCAAGTGGCATGGAAATGGACTGAAAGAGAAGATGAATCG 1514
Query 1479 GGACAGAAAGAAGGTGGGTTTAAACGGATATACTTGCATCAAGAAGGTTTCCCAGGATCT 1538
||||||||||||||||| || || ||||||||||||||||||||||||||||| ||||||
Sbjct 1515 GGACAGAAAGAAGGTGGATTCAAGCGGATATACTTGCATCAAGAAGGTTTCCCGGGATCT 1574
Query 1539 CGACGTGGCTCAATTGTTTCATTGCCTGGTGGTGATGGAACCGGTGAGGCAGATTTTGTA 1598
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 1575 CGACGTGGCTCAATTGTTTCATTGCCTGGAGGTGATGGAACCGGTGAGGCAGAGTTTGTA 1634
Query 1599 CAAGCGTCTGCTTTGGTTAGCCAACCAGCTCTTTATTCCAAAGACCTTCTCAAAGAACAT 1658
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1635 CAAGCGTCTGCTTTGGTTAGCCAACCAGCTCTTTATTCCAAAGACCTTCTCAAGGAACAT 1694
Query 1659 ACAATTGGTCCTGCTATGGTACATCCATCCGAAACAACTAAAGGGTCAATTTGGCATGAT 1718
||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||
Sbjct 1695 TCAATTGGTCCTGCTATGATGCATCCATCCGAAACAGCTAAAGGGTCAATTTGGCATGAT 1754
Query 1719 CTTCATGATCCTGGAGTCAAGCGTGCATTAGTCGTAGGAGTTGGACTTCAAATACTTCAG 1778
|||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 1755 CTTCATGATCCTGGAGTCAAACGTGCATTAGTCGTAGGAGTCGGACTTCAAATACTTCAA 1814
Query 1779 CAGTTCTCAGGCATCAACGGAGTTCTTTACTACACACCGCAAATCCTTGAGCAGGCGGGT 1838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1815 CAGTTCTCAGGCATCAACGGAGTTCTTTACTACACACCGCAAATCCTTGAGCAGGCGGGT 1874
Query 1839 GTCGGGATCCTACTATCGAACATGGGGATTAGTTCTTCCTCAGCATCCTTACTTATAAGT 1898
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1875 GTCGGGATTCTACTATCGAACATGGGGATTAGTTCTTCCTCAGCATCCTTACTTATAAGT 1934
Query 1899 GCATTGACAACCTTTGTGATGTTACCTGCAATAGCTGTTGCAATGAGGCTCATGGATCTT 1958
|||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct 1935 GCATTGACAACCTTTGTGATGTTACCTGCAATCGCCGTTGCAATGAGGCTCATGGATCTC 1994
Query 1959 TCTGGTCGAAGGACCTTGCTTCTCACCACGATACCAATCCTGATAGCATCTCTATTGGTT 2018
|| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1995 TCAGGTCGAAGGACTTTGCTTCTCACCACGATACCAATCCTGATAGCATCTCTATTGGTC 2054
Query 2019 TTAGTAATCTCAAATCTTGTTCACATGAACAGCATTGTGCACGCGGTCTTATCAACCGTA 2078
||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct 2055 TTAGTAATCTCGAATCTCGTTCACATGAACAGCATTGTGCACGCAGTCTTATCAACCGTA 2114
Query 2079 AGCGTTGTGCTCTACTTCTGCTTCTTCGTGATGGGTTTCGGTCCTGCTCCAAACATCCTC 2138
|| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2115 AGTGTTGTGCTCTACTTCTGTTTCTTCGTGATGGGTTTCGGTCCTGCTCCAAACATCCTC 2174
Query 2139 TGTTCAGAGATTTTTCCAACTCGAGTCCGCGGAATCTGCATCGCCATCTGCGCACTCACC 2198
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2175 TGTTCAGAGATCTTTCCAACTCGAGTCCGCGGAATCTGCATCGCCATCTGCGCACTCACC 2234
Query 2199 TTCTGGATCTGTGACATAATCGTCACTTACAGTCTCCCCGTGCTGCTCAAATCCATTGGA 2258
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct 2235 TTCTGGATCTGTGACATTATCGTCACTTACAGTCTCCCTGTGCTGCTCAAATCCATTGGA 2294
Query 2259 CTAGCTGGTGTGTTTGGAATGTACGCAATCGTATGTTGCATTTCATGGGTCTTTGTGTTC 2318
|| ||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||
Sbjct 2295 CTTGCTGGTGTGTTTGGAATGTACACAATCGTCTGTTGCATCTCATGGGTCTTTGTGTTC 2354
Query 2319 ATTAAAGTCCCGGAAACTAAAGGCATGCCACTTGAAGTCATCACAGAGTTCTTTTCTGTT 2378
||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct 2355 ATTAAAGTCCCCGAAACTAAAGGCATGCCACTTGAAGTCATCACAGAGTTCTTCTCCGTT 2414
Query 2379 GGAGCTAGACAAGCTGAAGCTGCTAAAAACGAGTGAGAAACTGAAAGACTTGTTGAGATA 2438
||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||
Sbjct 2415 GGAGCTAGACAAGCTGAAGCTGCCAAAAACGAGTGAGAAACTAAAAGACTTG---AGATC 2471
Query 2439 AAAAGTTTGTGTAAT------AT-T-CATGTGGATTTGTTGTTGTCTTTTTACTTTGTGC 2490
||||||||||||||| || | ||||||||||||||||||||||||||||||||||
Sbjct 2472 AAAAGTTTGTGTAATGTTTCCATGTTCATGTGGATTTGTTGTTGTCTTTTTACTTTGTGC 2531
Query 2491 AGTAATAATCATCTCTCTCTGT-T-TC-GT--CTTCTTC---ATGTGGGGAGaaaaaaaa 2542
|||||||||||||||||||| | | || || ||||||| ||||||||||||||||||
Sbjct 2532 AGTAATAATCATCTCTCTCTCTCTCTCTGTTTCTTCTTCCTCATGTGGGGAGAAAAAAAA 2591
Query 2543 GTTTCAAACTTTCAGTTACGAATCTCTTTATTACCATTTACCATTT 2588
|||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct 2592 GTTTCAAACTTTCAATTACGAATCTCTTTATTATCATTTACCATTT 2637
Score = 141 bits (76), Expect = 3e-32
Identities = 97/106 (92%), Gaps = 6/106 (6%)
Strand=Plus/Plus
Query 1 GATTTAAACCAAAAGGGTAAAC------AATGCTTTATGATTGCTTAGTGACGCCATTGA 54
|||||||||||||||||||||| |||||||| || ||||||||||||||||||||
Sbjct 1 GATTTAAACCAAAAGGGTAAACAAAAGAAATGCTTTTTGTTTGCTTAGTGACGCCATTGA 60
Query 55 AGCAGCGGCTCACTGATAGTGGCTTCTTCTGCCTCCAATTCCAAGT 100
||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 61 AGCAGCGGCTCACAGATAGTGGCTTCTTCTGCCTCCAATTCCAAGT 106
> Ahg472320 jgi|Araly1|472320|fgenesh2_kg.1__2274__AT1G20840.1
Length=2445
Score = 220 bits (119), Expect = 3e-56
Identities = 519/707 (73%), Gaps = 47/707 (7%)
Strand=Plus/Plus
Query 1718 TCTTCATGATCCTGGAGTCAAGCGTGCATTAGTCGTAGGAGTTGGAC-TTCAAATACTTC 1776
||||| ||| ||||| || |||||||| || ||||| || || || | |||| ||||| |
Sbjct 1615 TCTTCTTGAACCTGGTGTTAAGCGTGCGTTGGTCGTTGGTGTCGG-CATTCAGATACTAC 1673
Query 1777 AGCAGTTCTCAGGCATCAACGGAGTTCTTTACTACACACCGCAAATCCTTGAGCAGGCGG 1836
||||||| || || ||||| |||||||| |||||||| || || || || || | ||| |
Sbjct 1674 AGCAGTTTTCGGGTATCAATGGAGTTCTCTACTACACTCCTCAGATTCTAGAACGGGCTG 1733
Query 1837 GTGTCGGGATCCTACTATCGAACATGGGGA-TTAGTT-CTTCCTCAGCATCCTTACTTAT 1894
| || | || || || |||| | | ||| | |||| | | ||| || || || || ||
Sbjct 1734 GCGTAGATATTCTTCTTTCGAGCCT-CGGACTAAGTTCCAT-CTCGGCGTCATTCCTCAT 1791
Query 1895 AAGTGCATTGACAACCTTTGTGATGTTACCTGCAATAGCT-GTTGCAATGAGGCTCATGG 1953
|||| || ||||| || | ||| | || || || | | ||||| ||||| |||||||
Sbjct 1792 CAGTGGTTTAACAACATTACTCATGCTCCCAGCCATTG-TCGTTGCCATGAGACTCATGG 1850
Query 1954 ATCTTTCTGGTCGAAGGACCTTGCTTCTCACCACGATACCAATCCTGATAGCATCTCTA- 2012
|| |||| || ||||| | || |||||| || || ||| | || || | |||| |
Sbjct 1851 ATGTTTCCGGAAGAAGGTCATTACTTCTCTGGACAATCCCAGTTCTCAT--CGTCTC-AC 1907
Query 2013 TTG--GT-TTTAGTAATC-TCAAATCTTGTTCACATGAACAGCA-TTGTGCACGC-G-GT 2065
||| || || || ||| | | || || ||||| | || | | ||| |||| | |
Sbjct 1908 TTGTCGTCCTT-GTCATCAGC-GAGCTCGTCCACATTAGCA-AAGTCGTGAACGCAGCG- 1963
Query 2066 CTTATCAAC-CGTAAGCGTTGTGCTCTACTTCTGCTTCTTCGTGATGGGTTTCGGTCCTG 2124
| | || || || | || ||||||||||||||||||||||||||||| | |||||| |
Sbjct 1964 C-TCTCCACGGGT-TGTGTCGTGCTCTACTTCTGCTTCTTCGTGATGGGCTACGGTCC-G 2020
Query 2125 CT-CCAAACATCCTCTGTTCAGAGATTTTTCCAACTCGAGTCCGCGGAATCTGCATCGCC 2183
| ||||||||||||||||| || || || ||||| ||||||| || |||||||||||
Sbjct 2021 ATTCCAAACATCCTCTGTTCTGAAATCTTCCCAACAAGAGTCCGTGGTCTCTGCATCGCC 2080
Query 2184 ATCTGCGC-ACTCACCTTCTGGATCTGTGACATAATCGTCACTTACAGTCTCCCCGTGCT 2242
|| ||||| | | ||| |||||| | ||||| || ||||||||| || ||||| ||
Sbjct 2081 ATTTGCGCTA-TGGTCTTTTGGATCGGAGACATTATTGTCACTTACTCACTTCCCGTTCT 2139
Query 2243 GCTCAAATCCATTGGACTAGCTGGTGTGTTTG-GAATGTACGCAATCGTATGTTGCATT- 2300
|||| || || ||||||| |||||| ||| | || ||||| || | |||| ||
Sbjct 2140 CCTCAGCTCGATCGGACTAGTTGGTGT-TTTCAGCATTTACGCTG-CGG-T-TTGCGTTA 2195
Query 2301 TC--ATGGGTCTTTGTGTT-CATTAAAGTCCCGGAAACTAAAGGCATGCCACTTG-AAGT 2356
|| |||| |||| || || ||| ||||||||||| || ||||||||||| ||| ||||
Sbjct 2196 TCTCATGGATCTTCGT-TTACATGAAAGTCCCGGAGACCAAAGGCATGCCT-TTGGAAGT 2253
Query 2357 CATCACAGAGTTCTTTTC-TGTTGGAGCT-A-G-ACAAGCTGAAGCT 2399
|||||||| | |||| | | |||||||| | | |||||| |||||
Sbjct 2254 TATCACAGACTACTTTGCCT-TTGGAGCTCAAGCACAAGCACAAGCT 2299
> Ahg898048 jgi|Araly1|898048|Al_scaffold_0005_2014
Length=2193
Score = 182 bits (98), Expect = 1e-44
Identities = 220/277 (79%), Gaps = 16/277 (6%)
Strand=Plus/Plus
Query 2103 TTCGTGATGGG-TTTCGGTC-CTGCTCCAAACATCCTCTGTTCAGAGATTTTTCC-AACT 2159
||||||||||| ||| || | | | ||||||||||| || |||||||| || || | ||
Sbjct 1870 TTCGTGATGGGTTTTGGGGCAAT-C-CCAAACATCCTATGCTCAGAGATCTTCCCTACCT 1927
Query 2160 CGAGTCCGCGGAATCTGCATCGCCATCTGCGCACTCACCTTCTGGATCTGTGACATAATC 2219
| || || || |||||||| ||||||| || ||||| |||||||||||||||||||||
Sbjct 1928 C-TGTACGTGGTCTCTGCATCACCATCTGTGCCCTCACTTTCTGGATCTGTGACATAATC 1986
Query 2220 GTCACTTACAGTCTCCCCGTGC-TGCTCAAATCCATTGG-ACTAGCTGGTGTGTTTGGAA 2277
|||||||||| |||||| || | |||||||||||||||| | | || || || ||||| |
Sbjct 1987 GTCACTTACACTCTCCCAGT-CATGCTCAAATCCATTGGCATT-GCGGGAGTCTTTGGCA 2044
Query 2278 TGTACGCAATCGTATGTTGCAT-TT-CATGGGTCTTTGTGTTCATTAAAGTCCCGGAAAC 2335
| || |||||||| ||| || | || ||||||| ||||||| | | | || || || ||
Sbjct 2045 TTTATGCAATCGTCTGT-GC-TGTTGCATGGGTTTTTGTGTACCTCAGGGTACCAGAGAC 2102
Query 2336 TAAAGGCA-TGCCACTTGAAGTCATCACAGAGTTCTT 2371
||||| | |||| |||||||| ||| | ||||||||
Sbjct 2103 -AAAGGGAATGCCCCTTGAAGTTATCTCCGAGTTCTT 2138
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 97663388180
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5