BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT4G35780.1 Length=2110 Score E Sequences producing significant alignments: (Bits) Value Ahg491066 jgi|Araly1|491066|fgenesh2_kg.7__499__AT4G35780.1 3293 0.0 Ahg931631 jgi|Araly1|931631|scaffold_304088.1 1367 0.0 > Ahg491066 jgi|Araly1|491066|fgenesh2_kg.7__499__AT4G35780.1 Length=2049 Score = 3293 bits (1783), Expect = 0.0 Identities = 1970/2059 (96%), Gaps = 18/2059 (1%) Strand=Plus/Plus Query 51 tctaatcttttcgcctttagttgaatctctGGGATCATTCTACCTTTTT-GTGGATTTAG 109 ||||||||| || |||||| |||||||| | |||||||||| ||||||| || ||||||| Sbjct 1 TCTAATCTTCTCACCTTTACTTGAATCT-T-GGATCATTCT-CCTTTTTCGT-GATTTAG 56 Query 110 GATCGAAGAAGAGATCACTCCTACTGTTGAA---TTCTGGTTTTACTTGA-GAGAGTTTT 165 ||||||||||||||||||||||||||||||| || ||||||| || | |||| || Sbjct 57 GATCGAAGAAGAGATCACTCCTACTGTTGAATTTTTTTGGTTTT-GTTTACTTGAGTGTT 115 Query 166 TCAATTCTGATCTGCTGTTTTGCGATGGCGATCAAAGAGGAGACGGAGGAGAGTTGCGGA 225 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 116 TCAATTCTGATCTGCTGTTTTCCGATGGCGATCAAAGAGGAGACGGAGGAGAGTTGCGGA 175 Query 226 AGCAGAGCCGTGGTAGCTTCAATAACGAAAGAAAGCCCTAGACAGCACCGTATGAAACTG 285 |||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 176 AGCAGAGCAGTAGTAGCTTCAATAACGAAAGAAAGCCCTAGACAGCATCGTATGAAACTT 235 Query 286 GAGGTGTACGGTGAGGTTCTTCAACGAATCCAGGAATCCAATTACGAAGAAGCTAATTTC 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 236 GAGGTGTACGGTGAGGTTCTTCAACGAATCCAGGAATCCAATTACGAAGAAGCTAATTTC 295 Query 346 CCTGGTTTTGATGATCTCCTCTGGCTTCACTTCAATCGTCTTCCTGCTCGATATGCTTTG 405 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct 296 CCTGGTTTTGATGATCACCTCTGGCTTCACTTCAATCGTCTTCCTGCTAGATATGCTTTG 355 Query 406 GATGTAAATGTTGAGAGAGCAGAAGATGTACTTACTCATCAGAGATTGTTGAAATTGGCT 465 ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 356 GATGTTAATGTTGAGAGAGCAGAAGATGTTCTTACTCATCAGAGATTGTTGAAATTGGCT 415 Query 466 GAAGAT-CCTGCTACTAGACCTGTTTTCGAAGTTCGTTGTGTGCAGGTTTCTCCCACATT 524 |||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 416 GAAGATCCCT-CTACTAGACCTGTTTTCGAAGTTCGTTGTGTACAGGTTTCTCCCACATT 474 Query 525 GAATGGAAATTCTGGTGACGTTGATCCTTCGGATCCTGCGGTCAATGAAGATGCTCAAAG 584 |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct 475 GAATGGAAATTCTGGTGACGTTGATCCTTCAGATCCTGCGGTCAAGGAAGATGCTCAAAG 534 Query 585 CTCCTATAACTCGAGGTCTCTTGCACCTCCAACTTTTGGTTCTTCTCCGAATTTCGAAGC 644 ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| || Sbjct 535 CTCTTATAACTCGAGGCCTCTTGCACCTCCAACTTTTGGTTCTTCTCCGAATTTCGAGGC 594 Query 645 TCTTACTCAAG-CTTACAAAGATCATGCTCAAGACGATGATAGTGCTGTCAATGCACAGT 703 ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| | Sbjct 595 TCTTACTCAAGCCTT-CAAAGATCATGCTCAAGACGATGATAGTGCTGTCAATGCACACT 653 Query 704 TGCCTAATTCTCGACCGATGCACGAAATCACCTTTTCTACAATCGACAGGCCGAAACTCC 763 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct 654 TGCCTAATTCTCGACCGATGCACGAAATCACCTTTTCTACAATAGACAGGCCCAAACTCC 713 Query 764 TTAGTCAGCTAACTTCCATGCTTGGTGAACTTGGATTGAATATTCAAGAGGCTCATGCTT 823 |||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct 714 TTAGTCAGTTAACTTCAATGCTTGGTGAACTTGGATTGAATATTCAAGAAGCTCATGCTT 773 Query 824 TCTCTACCGCCGATGGTTTCTCTCTCGATGTATTTGTTGTTGATGGCTGGTCGCAGGAGG 883 |||||||||| |||||||||||| | |||||||| ||||||||||| ||||||||||||| Sbjct 774 TCTCTACCGCGGATGGTTTCTCTTTGGATGTATTCGTTGTTGATGGTTGGTCGCAGGAGG 833 Query 884 AAACAGAAGGTTTAAAAGATGCATTGAAGAAGGAGATAAGAAAGTTTAAGGATCAACCTT 943 ||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||| Sbjct 834 AAACAGAAGGTTTAAAAGATGCATTGACGAAGGAGATAAGGAAGCTTAAGGATCAACCTT 893 Query 944 GTTCAAAACAGAAATCTATCACTTTCTTTGAGCATGACAAATCAACCAACGAGCTGCTAC 1003 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 894 GTTCAAAACAGAAATCTATCACTTTCTTCGAGCATGACAAATCAACCAACGAGCTGCTAC 953 Query 1004 CTGCGTGTGTTGAAATACCTACGGATGGAACTGATGAGTGGGAAATTGACATGAAGCAGC 1063 |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 954 CTGCATGTGTTGAAATACCTACGGATGGAACTGATGAGTGGGAAATTGACATGAAACAGC 1013 Query 1064 TCAAAATTGaaaaaaaGGTGGCATGTGGATCATACGGGGAACTATTTAGAGGAACCTATT 1123 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1014 TCAAAATTGAAAAAAAGGTGGCATGTGGATCATACGGAGAACTATTTAGAGGAACCTATT 1073 Query 1124 GTAGTCAGGAAGTAGCTATCAAAATTCTCAAGCCTGAGCGTGTTAATGCGGAAATGCTAC 1183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1074 GTAGTCAGGAAGTAGCTATCAAAATTCTCAAGCCTGAGCGTGTTAATGCGGAAATGCTAC 1133 Query 1184 GAGAGTTTTCTCAGGAAGTATATATAATGAGGAAAGTTCGGCATAAAAATGTTGTCCAGT 1243 ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct 1134 GAGAGTTTTCTCAGGAAGTGTATATAATGAGGAAAGTCCGGCATAAAAATGTTGTCCAGT 1193 Query 1244 TCATTGGTGCATGTACACGATCACCAAACCTCTGCATTGTGACAGAGTTCATGACTCGGG 1303 | || |||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1194 TTATCGGTGCATGTACACGATCACCAAACCTCTGCATTGTGACTGAGTTCATGACTCGGG 1253 Query 1304 GGAGCATTTATGATTTCCTTCACAAACACAAAGGGGTTTTTAAAATTCAATCTTTGCTCA 1363 ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1254 GGAGCATTTATGACTTCCTTCACAAACACAAAGGCGTTTTTAAAATTCAATCTTTGCTCA 1313 Query 1364 AAGTGGCACTCGACGTCTCGAAAGGAATGAATTATCTGCATCAAAACAATATTATTCATA 1423 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1314 AAGTGGCACTTGACGTCTCGAAAGGAATGAATTATCTGCATCAAAACAATATTATTCATA 1373 Query 1424 GAGACCTTAAGACTGCTAATCTTCTTATGGACGAACATGAAGTTGTCAAAGTTGCCGATT 1483 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1374 GAGACCTTAAGACTGCTAATCTTCTTATGGACGAACATGAAGTTGTCAAGGTTGCCGATT 1433 Query 1484 TTGGTGTTGCCAGAGTGCAGACTGAGTCAGGGGTTATGACAGCGGAAACAGGGACATACC 1543 |||| ||||||||||||||||||||||| ||||| |||||||| |||||||||||||||| Sbjct 1434 TTGGGGTTGCCAGAGTGCAGACTGAGTCGGGGGTCATGACAGCTGAAACAGGGACATACC 1493 Query 1544 GATGGATGGCTCCAGAGGTCATTGAGCACAAACCTTATGATCACAGGGCAGATGTCTTCA 1603 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1494 GATGGATGGCTCCAGAGGTCATTGAGCACAAACCTTATGATCACAGGGCGGATGTCTTCA 1553 Query 1604 GCTACGCGATTGTGCTGTGGGAACTTTTGACTGGGGAACTCCCATATTCTTACTTGACTC 1663 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1554 GCTACGCGATTGTGCTGTGGGAACTTTTGACTGGGGAACTCCCATATTCTTACTTGACTC 1613 Query 1664 CACTGCAAGCTGCTGTTGGCGTTGTCCAAAAGGGACTTAGACCAAAAATTCCAAAGGAAA 1723 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1614 CACTACAAGCTGCTGTTGGCGTTGTCCAAAAGGGACTTAGACCAAAAATTCCAAAGGAAA 1673 Query 1724 CACACCCAAAACTGACTGAACTTCTTGAGAAATGCTGGCAGCAAGACCCAGCTCTAAGAC 1783 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1674 CACATCCAAAACTGACTGAACTTCTTGAGAAATGCTGGCAGCAAGACCCAGCTCAAAGAC 1733 Query 1784 CCAATTTTGCAGAAATCATAGAAATGCTTAACCAACTAATCCGCGAGGTTGGAGATGATG 1843 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1734 CCAATTTTGCAGAAATCATAGAAATGCTTAACCAACTGATCCGCGAGGTTGGAGATGATG 1793 Query 1844 AGCGCCACAAGGATAAACATGGTGGTTACTTTTCAGGCCTaaaaaaaGGCCATCGTTGAC 1903 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1794 AGCGCCACAAGGATAAACATGGTGGTTACTTTTCAGGCCTAAAAAAAGGCCATCGTTGAC 1853 Query 1904 TCTCTCGGGTGCGCTGAAAAATTTGGTTTGATCGGTTTGATAGAGCTCTACTCACTTCTC 1963 ||| |||||||||||||| |||| ||||||| |||||||||||||||||||||||||| Sbjct 1854 ACTCACGGGTGCGCTGAAACTTTTG-TTTGATCAGTTTGATAGAGCTCTACTCACTTCTC 1912 Query 1964 GTTTTTTCGTTGTACAGTTTCTTAGAGCCTCACTCTTTTTGTCCATGTATAATTTTCTTA 2023 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1913 GTTTTT-CGTTGTACAGTTTCTTAGAGCCTCACTCTTTTTGTCCATGTATAATTTTGTTT 1971 Query 2024 AAAAACAATCTCCTTTTGATACAATTATCACTGCAGAGATTGATTTGGATTGCAACTCAA 2083 ||| |||||||||||||||||||| ||||||||||||||||| ||| |||||| ||||| Sbjct 1972 AAA--CAATCTCCTTTTGATACAATGATCACTGCAGAGATTGACTTGCATTGCAGCTCAA 2029 Query 2084 TAAAGTGAAAGCCATTCTT 2102 ||||||||||||||||||| Sbjct 2030 TAAAGTGAAAGCCATTCTT 2048 > Ahg931631 jgi|Araly1|931631|scaffold_304088.1 Length=1686 Score = 1367 bits (740), Expect = 0.0 Identities = 1364/1658 (82%), Gaps = 72/1658 (4%) Strand=Plus/Plus Query 181 TGTTTTGCGATGGCGATCAAAGAGGAGACGGAGGAGAGTTGCGGAAGCAGAGCCGTGGTA 240 |||||| ||||| |||||||||| ||| | |||||||||||| || ||||| || || Sbjct 14 TGTTTTCCGATGACGATCAAAGACGAGTC---GGAGAGTTGCGGTAGTAGAGCGGTCGTT 70 Query 241 GCTTCAATAACGAAAGAAAGCCCTAGACAGCACCGTATGAAACTGGAGGTGTACGGTGAG 300 ||||| | |||||| ||||||||| |||| |||||||| || || ||| ||||| Sbjct 71 GCTTCGCCGGCTCAAGAAAACCCTAGACATTACCGGATGAAACTTGATGTCTACAGTGAG 130 Query 301 GTTCTT-CAACGAATCCAGGAATCCAATTACGAAGAAGCTAAT-TTCCCTGGTTTTGATG 358 ||| || || ||| | || ||||| |||||||||||||||| | || |||| ||| || | Sbjct 131 GTT-TTACAGCGACTTCAAGAATCTAATTACGAAGAAGCTACTCTT-CCTGATTTCGAGG 188 Query 359 ATCTCCTCTGGCTTCACTTCAATCGTCTTCCTGCTCGATATGCT-TTGGATG-TAAATGT 416 ||| || ||||| || ||||||||||||||||||||||||||| || |||| |||| || Sbjct 189 ATCAACTTTGGCTCCATTTCAATCGTCTTCCTGCTCGATATGCTCTT-GATGTTAAA-GT 246 Query 417 TGAGAGAGCAGAAGATGTACTTACTCATCAGAGATTGTTGAAATTGGCTGAAGATCCTGC 476 ||||||||| |||||||| ||||||||||||||||| | |||||||| ||||||||||| Sbjct 247 TGAGAGAGCGGAAGATGTTCTTACTCATCAGAGATTACTAAAATTGGCGGAAGATCCTGC 306 Query 477 TACTAGACCTGT-TTTCGAAGTTCGTTGTGTGCAGGTTTCTCCCACATTGAATGGAAATT 535 ||||| ||||| ||| ||||||||| |||| ||||||||| | | | | | || Sbjct 307 AACTAGGCCTGTCTTT-GAAGTTCGTAGTGTACAGGTTTCT--C-C--T--A--G-AA-G 354 Query 536 CTGGTGACGTTGATCCTTCGGATCCTGCGGTCAATGAAGATGCTCAAAG--CT--CCTA- 590 || || | ||| | || || |||||||| | |||||||||||||| || || | Sbjct 355 CT-CTG-C--TGA--C-TCTGACCCTGCGGTGGAGGAAGATGCTCAAAGCTCTCACCAAC 407 Query 591 TAA-C--TC--GAGGTCTCTTGCACCTCCAACTTTTGGTTCTTCTCCGAATTTCGAAGCT 645 || | | | ||| |||||| ||||||||||||||||||||||| ||||| || ||| Sbjct 408 CAAGCGGACAGGGGGT-TCTTGCTCCTCCAACTTTTGGTTCTTCTCCAAATTTTGAGGCT 466 Query 646 CTTACTCAAGCTTA-CAAAGATCATGCTCAAGACGATGATAGTGCTGTCAATGC-ACAGT 703 |||||| || | ||| || || | |||| | |||||||| ||| ||||| ||| | Sbjct 467 ATTACTC-AGGGAAGTAAA-AT--TGTTGAAGATGTTGATAGTGTTGTGAATGCAACA-T 521 Query 704 TGCCTAATTCTCGACCGATGCACGAAATCACCTTTTCTACAATCGACAGGCCGAAACTCC 763 || || | ||||||| |||||||| ||||| ||||| || ||||| | |||||||||| Sbjct 522 TGTCT-A--CTCGACCAATGCACGAGATCACATTTTCAACCATCGATAAACCGAAACTCC 578 Query 764 TTAGTCAGCTAACTTCCATGCTTGGTGAACTTGGATTGAATATTCAAGAGGCTCATGCTT 823 |||| |||||||||||| |||||||||| |||||| ||||||| |||||||||||||||| Sbjct 579 TTAGCCAGCTAACTTCCCTGCTTGGTGAGCTTGGACTGAATATACAAGAGGCTCATGCTT 638 Query 824 TCTCTACCGCCGATGGTTTCTCTCTCGATGTATTTGTTGTTGATGGCTGGTCGCAGGAGG 883 | || || | |||||||||||||| ||||| ||||| |||||||| ||||| ||||||| Sbjct 639 TTTCCACTGTAGATGGTTTCTCTCTAGATGTCTTTGTAGTTGATGGTTGGTCTCAGGAGG 698 Query 884 AAACAGAAGGTTTAAAAGATGCATTGAAG-AAGGAGATA-AGAAAGTTTAAGGATCAACC 941 ||||||| ||| |||| ||||||||| || || |||||| | ||| ||||||||||||| Sbjct 699 AAACAGATGGTCTAAAGGATGCATTG-AGCAAAGAGATATTG-AAGCTTAAGGATCAACC 756 Query 942 TTGTTCAAAACAGAAATCTATCACTTTCTTTGAGCATGACAAATCAACCAACGAGCTGCT 1001 | || |||||||||||||||| |||||||||||||||||||||||| ||| ||||| | Sbjct 757 TGGTGCAAAACAGAAATCTATTTCTTTCTTTGAGCATGACAAATCAAGCAATGAGCTTAT 816 Query 1002 ACCTGCGTGTGTTGAAATACCTACGGATGGAACTGATGAGTGGGAAATTGACATGAAGCA 1061 ||| || || |||||||||| |||||||||||||||||||||||||||||| |||| || Sbjct 817 ACCCGCCTGCATTGAAATACCCACGGATGGAACTGATGAGTGGGAAATTGACGTGAAACA 876 Query 1062 GCTCAAAATTGaaaa-aaaGGTGGCATGTGGATCATACGGGGAACTATTTAGAGGAACCT 1120 ||||||||||||||| ||| ||||||| ||| ||||| ||||| || |||||| || | Sbjct 877 GCTCAAAATTGAAAAGAAA-GTGGCATCTGGTTCATATGGGGATCTGCATAGAGGCACTT 935 Query 1121 ATTGTAGTCAGGAAGTAGCTATCAAAATTCTCAAGCCTGAGCGTGTTAATGCGGAAATGC 1180 |||| ||||||||||||||||||||| ||||||||||||||||||| || || |||| Sbjct 936 ATTGCAGTCAGGAAGTAGCTATCAAATTTCTCAAGCCTGAGCGTGTAAACAATGAGATGC 995 Query 1181 -TACGAGAGTTTTCTCAGGAAGTATATATAATGAGGAAAGTTCGGCATAAAAATGTTGTC 1239 || |||| |||||||| ||||| | |||||||||||||||||| || ||||| || || Sbjct 996 TTA-GAGAATTTTCTCAAGAAGTTTTTATAATGAGGAAAGTTCGACACAAAAACGTCGTT 1054 Query 1240 CAGTTCATT-GGTGCATGTACACGATCACCAAACCTCTGCATTGTGACAGAGTTCATGAC 1298 || || || |||||||| ||| |||| |||| |||||| || ||||| ||||| ||| | Sbjct 1055 CAATT-TTTGGGTGCATGCACAAGATCTCCAACCCTCTGTATAGTGACTGAGTTTATGGC 1113 Query 1299 TCGGGGGAGCATTTATGATTTCCTTCACAAACACAAAGGGGTTTTTAAAATTCAATCTTT 1358 ||| |||||||| |||||||| ||||||||||| ||| | | ||| ||| ||||| |||| Sbjct 1114 TCGAGGGAGCATATATGATTTTCTTCACAAACAGAAATGCGCTTTCAAACTTCAAACTTT 1173 Query 1359 GCTCAAAGTGGCACTCGACGTCTCGAAAGGAATGAATTATCTGCATCAAAACAATATTAT 1418 ||| ||||| ||||| || || | |||||||||| ||| ||||||||||||| ||||| Sbjct 1174 GCTTAAAGTTGCACTTGATGTGGCAAAAGGAATGAGCTATTTGCATCAAAACAACATTAT 1233 Query 1419 TCATAGAGACCTTAAGACTGCTAATCTTCTTATGGACGAACATGAAGTTGTCAAAGTTGC 1478 ||| || |||||||||||||| |||||||||||||| ||||||| | ||||||| ||||| Sbjct 1234 TCACAGGGACCTTAAGACTGCGAATCTTCTTATGGATGAACATGGACTTGTCAAGGTTGC 1293 Query 1479 CGATTTTGGTGTTGCCAGAGTGCAGACTGAGTCAGGGGTTATGACAGCGGAAACAGGGAC 1538 ||||| || |||||||||||||||| ||| ||||| || |||||||| ||||||||||| Sbjct 1294 TGATTTCGGAGTTGCCAGAGTGCAGATTGAATCAGGAGTCATGACAGCTGAAACAGGGAC 1353 Query 1539 ATACCGATGGATGGCTCCAGAGGTCATTGAGCACAAACCTTATGATCACAGGGCAGATGT 1598 ||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct 1354 TTACCGGTGGATGGCTCCAGAGGTCATTGAGCACAAACCTTACAATCACAAGGCAGATGT 1413 Query 1599 CTTCAGCTACGCGATTGTGCTGTGGGAACTTTTGACTGGGGA-ACTCCCATATTCTTACT 1657 ||||| || ||||| ||||| ||||||||| ||||||| || | |||||||| ||| || Sbjct 1414 GTTCAGTTATGCGATAGTGCTATGGGAACTTCTGACTGGTGACA-TCCCATATGCTTTCT 1472 Query 1658 TGACTCCACTGCAAGCTGCTGTTGGCGTTGTCCAAAAGGGACTTAGACCAAAAATTCCAA 1717 |||||||||| ||||| ||||||||||||||||||||||| ||| |||| |||||||||| Sbjct 1473 TGACTCCACTACAAGCAGCTGTTGGCGTTGTCCAAAAGGGGCTTCGACCGAAAATTCCAA 1532 Query 1718 AG-GAAACACACCCAAAACTGACTGAACTTCTTGAGAAATGCTGGCAGCAAGACCCAGCT 1776 || ||| ||||||||||| ||| | ||| || |||| ||||||||| |||||||| || Sbjct 1533 AGAGAA-CACACCCAAAAGTGAAGGGACTACTAGAGAGATGCTGGCATCAAGACCCGGCA 1591 Query 1777 CTA-AGACCCAAT-TTTGCAG-AAATCATAGAAATGCT 1811 | | ||||| | | |||| || |||||||||||||||| Sbjct 1592 C-AGAGACC-ACTGTTTG-AGGAAATCATAGAAATGCT 1626 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 79380070580 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5