BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT4G36210.3 Length=2481 Score E Sequences producing significant alignments: (Bits) Value Ahg944253 jgi|Araly1|944253|scaffold_700482.1 2708 0.0 Ahg480715 jgi|Araly1|480715|fgenesh2_kg.3__3416__AT2G18100.1 1382 0.0 Ahg328137 jgi|Araly1|328137|fgenesh1_pm.C_scaffold_7000364 514 1e-144 > Ahg944253 jgi|Araly1|944253|scaffold_700482.1 Length=1693 Score = 2708 bits (1466), Expect = 0.0 Identities = 1621/1696 (96%), Gaps = 10/1696 (1%) Strand=Plus/Plus Query 455 CGAATGATGCTTCTGCCGAGATGGTGGAGCAAGAGATGGCCTTAGCTAAAGCTGCTGATG 514 ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CGAGTGATGCTTCTGTCGAGATGGTGGAGCAAGAGATGGCCTTAGCTAAAGCTGCTGATG 60 Query 515 CTATGGTGCATAGCATTCAATGCTCTGTATCTATAGATGCTAAGAAGGAGAAGCATCAAG 574 ||||||||||||| || ||| |||||||||||| |||||||||||||||||||||||| | Sbjct 61 CTATGGTGCATAGTATCCAAAGCTCTGTATCTAGAGATGCTAAGAAGGAGAAGCATCAGG 120 Query 575 AATACGAAAACGAATGCCGTGAGAAATATGCTGTTCCTGAGGTAAAATCAAAAGATGTTG 634 |||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct 121 AATATGAAAATGAATGCCGTGAGAAATATGCGGTTCCTGAGGTAAAATCAAAAGATGTGG 180 Query 635 ATTTGGATAAAGAGAAGGATAAGAAGGAAGCGGCTGAAAGTGCTGCAAGAGA-AG-GTCT 692 |||||||||||||||||||||||||||| |||||||| | ||||| ||| | || |||| Sbjct 181 ATTTGGATAAAGAGAAGGATAAGAAGGAGGCGGCTGATATTGCTG--AGACAGAGAGTCT 238 Query 693 TGAAGCGGGTGTGGTTATTATAGATGGAAGCCACAAGCCTGAAGTTCTTGAAAATGAGAA 752 |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 239 TGAAGCTGGTGTAGTTATTATAGATGGAAGCCACAAGCCTGAAGTTCTTGAAAATGAGAA 298 Query 753 GTCTGTTGAGGAAGTAACATTGCTTAGTCATCAGAGGAAGATAAATGTTCTTTATGAGCT 812 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 299 ATCTGTTGAGGAAGTAACATTGCTTAGCCATCAGAGGAAGATAAATGTTCTTTATGAGCT 358 Query 813 ACTTTCTGCTTGCTTGTCAGATAAACATCACGAGGATAAGAAATGTAAACGGTGTAGAAA 872 ||||||||||||||||||||| |||||||| |||||||| |||||||||||| ||||||| Sbjct 359 ACTTTCTGCTTGCTTGTCAGACAAACATCAAGAGGATAATAAATGTAAACGGCGTAGAAA 418 Query 873 AGGCTATGATGCGCGTCACCGTGTTGCTCTCCGTTTACTTGCGACCTGGTTTAACATTGA 932 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 419 AGGCTATGATGCGCGTCACCGTGTTGCTCTCCGTTTACTTGCGACCTGGTTTAACATTGA 478 Query 933 GTGGATTAAAGTGGAAGCAATTGAGACAATGGTCGCATGCTCTGCCATGGCCATTCAGAA 992 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 479 GTGGATTAAAGTGGAAGCAATTGAGACAATGGTCGCATGCTCTGCCATGGCTATTCAGAA 538 Query 993 GTCTGCTGAAATGAAGGGTGAAGATAATCTAACTCCTACGACTTCATGGGCTAAGTGGAA 1052 ||||||||||||||||||||||||| ||| || |||| |||||||||||||||||||| Sbjct 539 GTCTGCTGAAATGAAGGGTGAAGATGCTCTGTCTACTACAACTTCATGGGCTAAGTGGAA 598 Query 1053 GCGAGGAGGCATCATTGGTGCCGCTGCTATTACAGGAGGCACTTTGATGGCCATAACTGG 1112 ||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct 599 GCGTGGAGGCATCATTGGTGCCGCTGCTATTACAGGGGGCACTTTGATGGCCATCACTGG 658 Query 1113 TGGATTGGCTGCTCCAGCTATAGCTGCAGGATTTGGTGCATTGGCACCAACACTGGGCAC 1172 ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct 659 TGGATTGGCTGCTCCAGCTATTGCTGCAGGGTTTGGTGCATTGGCACCAACACTGGGCAC 718 Query 1173 AATTATTCCGGTGATTGGAGCTGG-GGGTTTTGCTGCTGCGGCTAGTGCCGCAGGAACTG 1231 | |||| ||||||||||||||||| ||| ||||||||||| ||||||||||| ||||||| Sbjct 719 ACTTATACCGGTGATTGGAGCTGGTGGG-TTTGCTGCTGCAGCTAGTGCCGCTGGAACTG 777 Query 1232 TTGCTGGCTCCGTTGCGGTTGCAGCATCGTTTGGAGCTGCTGGAGCTGGTCTCACAGGGA 1291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 778 TTGCTGGCTCCGTTGCGGTTGCAGCATCGTTTGGAGCTGCTGGAGCTGGTCTCACAGGGA 837 Query 1292 CTAAGATGGCAAGGAGAATTGGGGACCTTGATGAGTTCGAATTTAAAGCTATTGGCGAAA 1351 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 838 CTAAGATGGCAAGGAGAATTGGGGACCTTGATGAGTTCGAATTTAAAGCTATTGGCGAAA 897 Query 1352 ATCATAATCAAGGACGGTTAGCAGTGGAAGTCTTGGTTGCTGGTGTTGTTTTTGAAGAAG 1411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 898 ATCATAATCAAGGACGGTTAGCAGTGGAAGTCTTGGTTGCTGGTGTTGTTTTTGAAGAAG 957 Query 1412 AAGATTTTGTGAAACCATGGGAAGGGTTAACTAGTAATCTGGAGAGGTACACGCTGCAAT 1471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 958 AAGATTTTGTGAAACCATGGGAAGGGTTAACTAGTAATCTGGAGAGGTACACGCTGCAAT 1017 Query 1472 GGGAGTCCAAGAATCTTATCTTAGTGAGCACAGCGATTCAGGATTGGCTTACTTCAAGAC 1531 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1018 GGGAGTCCAAGAATCTTATCTTAGTGAGCACAGCAATTCAGGATTGGCTTACTTCAAGAC 1077 Query 1532 TTGCAATGGAATTGATGAAACAGGGAGCAATGCACACTGTGTTGGCCTCTCTTTTAATGG 1591 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1078 TTGCCATGGAATTGATGAAACAGGGAGCAATGCACACTGTGTTGGCCTCTCTTTTAATGG 1137 Query 1592 CATTGGCATGGCCAGCGACAATCTTAGTAGCTGCTGATTTCATAGATAGCAAATGGAGTA 1651 |||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct 1138 CATTAGCATGGCCAGCGACTATCTTAGTAGCCGCTGATTTCATAGATAGCAAATGGAGTA 1197 Query 1652 TTGCTATTGACAGGTCGGATAAAGCAGGAAGACTTCTAGCTGAAGTGCTACAAAAAGGCT 1711 |||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||| Sbjct 1198 TTGCTATTGATAGGTCGGACAAAGCAGGAAGACTTCTAGCTGAAGTACTACAAAAAGGCT 1257 Query 1712 TGCAAGGAAATAGACCCATCACTCTAGTTGGTTTTTCGCTTGGTGCTCGTGTCATCTTCA 1771 ||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||| Sbjct 1258 TGCAAGGAAATAGACCCATCACTCTCGTAGGTTTTTCACTTGGTGCTCGTGTCATCTTCA 1317 Query 1772 AATGCCTCCAAGCTCTGGCTGAGACAGAACAAAACGCTGAACTTGTGGAGAGAGTTGTTC 1831 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct 1318 AATGCCTCCAAGCTCTGGCCGAGACAGAACAAAACGCTGAACTTGTGGAAAGAGTTGTTC 1377 Query 1832 TTCTTGGAGCACCCATTTCAATCAATAGTGAAAACTGGCGAGACGTAAGGAAGATGGTCG 1891 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 1378 TTCTTGGAGCACCCATTTCAATCAATAATGAAAACTGGCGAGACGTAAGGAAGATGGTAG 1437 Query 1892 CTGGAAGATTCATCAATGTTTATGCCACAAATGATTGGACCCTTGGTATCGCATTTCGTG 1951 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1438 CTGGAAGATTCATCAATGTTTATGCCACAAATGATTGGACCCTTGGTATCGCATTTCGGG 1497 Query 1952 CTAGTTTAATT-TCCCAAGGATTAGCCGGAATCCAACCAATATGTATCCCTGGTATCGAA 2010 |||||||| || |||||||||||||| |||||||||||||| ||||||||||| |||||| Sbjct 1498 CTAGTTTA-TTCTCCCAAGGATTAGCGGGAATCCAACCAATTTGTATCCCTGGGATCGAA 1556 Query 2011 AACGTGGATGTAACCGATATGGTGGAAGGTCACTCTTCATATCTATGGAAAACTCAGCAG 2070 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1557 AATGTGGATGTAACCGATATGGTGGAAGGTCACTCTTCATATCTATGGAAAACTCAGCAG 1616 Query 2071 ATTTTAGAAAGACTCGAGATCGACACATATTACCCTGTTTTTCGAGACACTCTTTAAC-C 2129 ||| |||| |||||||| |||||||| ||||||||||||||| |||||||||| |||| | Sbjct 1617 ATTCTAGACAGACTCGAAATCGACACTTATTACCCTGTTTTTAGAGACACTCTCTAACGC 1676 Query 2130 AAAATCAAATTAGATA 2145 ||| |||||||||||| Sbjct 1677 AAA-TCAAATTAGATA 1691 > Ahg480715 jgi|Araly1|480715|fgenesh2_kg.3__3416__AT2G18100.1 Length=2307 Score = 1382 bits (748), Expect = 0.0 Identities = 1220/1445 (84%), Gaps = 44/1445 (3%) Strand=Plus/Plus Query 710 TTATAGATGGAAGCCACAAGCCT-GAAGTTCTTGAAAATGAGAAGTCTGTTGAGGAAGTA 768 ||| ||||||| | || || ||| | | || ||||| ||||||| |||||| ||||||| Sbjct 639 TTAAAGATGGAGGTCATAATCCTGGGA-TTGTTGAACATGAGAAACCTGTTGGGGAAGTA 697 Query 769 ACATTGCTTAGTCATCAGAGGAAGATAAATGTTCTTTATGAGCTACTTTCTGCTTGCTTG 828 |||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||| Sbjct 698 GCATTGCTTAGCCATGAGAGGAAGATAAATGTTCTTTACGAGCTACTTTCTGCTTGCTTG 757 Query 829 TCAGATAAACATCACGAGGATAAGAAATGTAAACGGTGTAGAAAAGGCTATGATGCGCGT 888 ||||||||||| | || | ||||||||| |||| |||| |||||||||||||||||| Sbjct 758 GCAGATAAACATGAGGAAAACGAGAAATGTACACGGCGTAGGAAAGGCTATGATGCGCGT 817 Query 889 CACCGTGTTGCTCTCCGTTTACTTGCGACCTGGTTTAACATTGAGTGGATTAAAGTGGAA 948 |||| ||||||||| || |||||||| || |||||| || || ||||||||||| ||||| Sbjct 818 CACCATGTTGCTCTGCGGTTACTTGCTACGTGGTTTGACTTTCAGTGGATTAAAATGGAA 877 Query 949 GCAATTGAGACAATGGTC-GCATGCTCTGCCATGGCCATT-CAGAAGTC-TGCT-GAAAT 1004 ||| |||| || || ||| |||||||||||||||| |||| || ||||| | | || || Sbjct 878 GCAGTTGAAACGAT-GTCTGCATGCTCTGCCATGG-CATTGCAAAAGTCAAG-TGGATAT 934 Query 1005 GAAGGGTGAAGA-TAATCTAACTCCTACGACTTCATGGGCTAAGTGGAAGCGAGGAGGCA 1063 |||| ||||| | ||| | || || | | ||||||||| |||||||| ||||||| Sbjct 935 -AAGGAAGAAGAGT-CTCTGTCACCAACTAGTGAATGGGCTAAATGGAAGCGTGGAGGCA 992 Query 1064 TCATTGGTGCCGCTGCTATT-ACAGGAGGCACTTTGATGGCCATAACTGGTGGATTGGCT 1122 || |||| || |||||| || ||||| ||||||||||||||||| ||||| ||||||||| Sbjct 993 TCGTTGGAGCGGCTGCT-TTAACAGGGGGCACTTTGATGGCCATCACTGGGGGATTGGCT 1051 Query 1123 GCTCCAGCTATAGCTGCAGGATTTGGTGCATTGGCACCAACACTGGGCACAATTATTCCG 1182 |||||||| || |||||||| || |||||||||||||||||||| ||||| || ||||| Sbjct 1052 GCTCCAGCAATCGCTGCAGGGTTCGGTGCATTGGCACCAACACTAGGCACGATGGTTCCG 1111 Query 1183 GTGATTGGAG-CTGGGGGTTTTGCTGCTGCGGCT-AGTGCCGCAGGAACTGTTGCTGGCT 1240 || ||||||| | | ||| |||||||| || ||| || || || |||||||||||||| | Sbjct 1112 GTAATTGGAGCCAGTGGG-TTTGCTGCAGCTGCTGAG-GCTGCGGGAACTGTTGCTGGTT 1169 Query 1241 CCGTTGCGGTTGCAGCATCGTTTGGAGCTGCTGGAGCTGGTCTCACAGGGACTAAGATGG 1300 | ||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct 1170 CTGTTGCTGTTGCAGCATCTTTTGGAGCTGCTGGAGCTGGGCTCACAGGGACTAAGATGG 1229 Query 1301 CAAGGAGAATTGGGGACCTTGATGAGTTCGAATTTAAAGCTATTGGCGAAAATCATAATC 1360 | ||||||| ||||||| |||| ||||| ||||||||||| ||||| |||||||| |||| Sbjct 1230 CTAGGAGAACTGGGGACATTGAGGAGTTTGAATTTAAAGCCATTGGAGAAAATCACAATC 1289 Query 1361 AAGGACGGTTAGCAGTGGAAG-TCTTGGTTGCTGG-TGTTGTTTTTGAA-GAAGAAGATT 1417 ||||||| ||||| |||| || |||| |||||||| | ||| |||| || |||||||| | Sbjct 1290 AAGGACGATTAGCGGTGG-AGATCTTAGTTGCTGGCT-TTG-TTTTAAAGGAAGAAGACT 1346 Query 1418 TTGTGAAACCATGGGAAGGGTTAACTAGTAATC-TGGAGAGGTACACGCTGCAATGGGAG 1476 |||| ||||| ||||| ||||||||||| || | |||| ||||| ||| |||| ||||| Sbjct 1347 TTGTAAAACCCTGGGAGGGGTTAACTAGCAA-CTTGGAAAGGTATACGGTGCATTGGGAA 1405 Query 1477 TCCAAGAATCTTATCT-TAGTGAGCACAGCGATTCAGGATTGGCTTACTTCAAGACTTGC 1535 ||||||||| |||| | ||||||||| || |||||||||||||||||||||||| |||| Sbjct 1406 TCCAAGAATATTAT-TGCAGTGAGCACTGCAATTCAGGATTGGCTTACTTCAAGAGTTGC 1464 Query 1536 AATGGAATTGATGAAACAGGGAGCAATGCACACTGTGTTGGCCTCTCTTTTAATGGCATT 1595 ||||| ||||||| ||| || ||||||||||| || | ||| |||||| ||| | Sbjct 1465 TATGGAGTTGATGAGACAAGGTGCAATGCACACCGTACTAAACTCGCTTTTAGCAGCAAT 1524 Query 1596 GGCATGGCCAGCGACAAT-CTTAGTAGCTGCTGATTTCATAGATAGCAAATGGAGTATTG 1654 ||||||||| || ||||| ||| ||||||||||||||||||||||| ||||||||||| | Sbjct 1525 GGCATGGCCGGCTACAATCCTT-GTAGCTGCTGATTTCATAGATAGTAAATGGAGTATCG 1583 Query 1655 CTATTGACAGGTCGGATAAAGCAGGAAGACTTCTAGCTGAAGTGCTACAAAAAGGCTTGC 1714 ||||||||||||| || |||||||||| |||||| ||||||| ||| | |||||| |||| Sbjct 1584 CTATTGACAGGTCAGACAAAGCAGGAAAACTTCTTGCTGAAGCGCTTCGAAAAGGGTTGC 1643 Query 1715 AAGGAAATAGACCCATCACTCTAGTTGGTTTTTCGCTTGGTGCTCGTGTCATCTTCAAAT 1774 ||||||||||||| | ||||| |||||||||||||||||||| |||||| |||| || | Sbjct 1644 AAGGAAATAGACCTGTGACTCTCGTTGGTTTTTCGCTTGGTGCGCGTGTCGTCTTTAAGT 1703 Query 1775 GCCTCCAAG-CTCTGGCT-GAGACAGAACAA-AACGCTGAACTTGTGGAGAGAGTTGTTC 1831 |||||| || |||||| | ||||| ||| || || |||||| ||||||| |||||||||| Sbjct 1704 GCCTCC-AGACTCTGG-TCGAGACTGAA-AAGAATGCTGAAATTGTGGAAAGAGTTGTTC 1760 Query 1832 TTCTTGGAGCACCCATTTCAATCAATAGTGAAAACTGGCGAGACGTAAGGAAGATGGTCG 1891 ||||||||||||| ||||||||||| | ||| || |||||||||||||| |||||||| | Sbjct 1761 TTCTTGGAGCACCAATTTCAATCAAGAATGAGAATTGGCGAGACGTAAGAAAGATGGTGG 1820 Query 1892 CTGGAAGATTCATCAATGTTTATGCCACAAATGATTGGACCCTTGGTA-TCGCATTTCGT 1950 ||||||||||||| |||||||| ||||||||||||||||||||||| | | ||||||||| Sbjct 1821 CTGGAAGATTCATTAATGTTTACGCCACAAATGATTGGACCCTTGG-AGTTGCATTTCGT 1879 Query 1951 GCTAGTTTAATT-TCCCAAGGATTAGCCGGAATCCAACCAATATGTATCCCTGGTATCGA 2009 || ||| | || |||||||||||||| ||||||||||| | ||||| || || ||||| Sbjct 1880 GCAAGTCT-GTTGTCCCAAGGATTAGCTGGAATCCAACCGGTCTGTATACCGGGGATCGA 1938 Query 2010 AAACGTGGATGTAACCGATATGGTGGAAGGTCACTCTTCATATCTATGGAAAACTCAGCA 2069 | | |||||||||||||||||||||||||||||||| || || |||||||||||||| || Sbjct 1939 AGATGTGGATGTAACCGATATGGTGGAAGGTCACTCATCTTACCTATGGAAAACTCAACA 1998 Query 2070 GATTTTAGAAAGACTCGAGA-TCGACA-CATATTACCCTGTTTTTCGAGACACTCTTTAA 2127 || | ||||||||||| | ||| || | | |||||| ||||||||||||||||| ||| Sbjct 1999 TATCCTGGAAAGACTCGA-ACTCGTCAAC-TCTTACCCCGTTTTTCGAGACACTCTCTAA 2056 Query 2128 CCAAA 2132 | ||| Sbjct 2057 CTAAA 2061 Score = 278 bits (150), Expect = 2e-73 Identities = 428/554 (77%), Gaps = 52/554 (9%) Strand=Plus/Plus Query 104 TTTCGATGGTGGAAGCTACGTCGAATTTGACGCCGA-CTCAGAGATATGCGGCCGGCGCA 162 ||| |||||||||||||||||||||||||||||| | | |||||||||||||| ||||| Sbjct 49 TTT-GATGGTGGAAGCTACGTCGAATTTGACGCC-ATCGCAGAGATATGCGGCAAGCGCA 106 Query 163 TTGTTTGCGATCGCTTTGAACCAAGCGCAAATCAACCAGACTCAGCCGCTGGGAACCCCG 222 |||||||||||||| | ||||||||||| |||| ||||||| ||| | |||| |||| Sbjct 107 TTGTTTGCGATCGCGCTCAACCAAGCGCAGATCAGCCAGACTAAGCTATTCGGAATCCCG 166 Query 223 GCGG-CGGA--A-GACG-ACG-A-CGGAG-G-C-GATGAAGAGCGA-A---GA-AGC-AA 266 || || | | | || | | | ||||| | | || ||| ||| | | || ||| || Sbjct 167 GCCATCG-ACCACGGCGGAGGTAACGGAGAGTCTGA-GAATAGCCATACCAGAGAGCCAA 224 Query 267 TT-GCAGT-AGCGGAGATTCTGTCTCCGATGACCCC-AGCCTTTGGGTACACGAGACGTC 323 | |||| | ||| ||| || ||||||||||| | | | ||||||| ||||| | || Sbjct 225 TCAGCAGCGA-CGGTGATCCTATCTCCGATGACGCGGATC-TTTGGGTCCACGA-A-GTT 280 Query 324 T--GGCCTTCTTC-GCCCCGTTTTCAGATGTCTTGAGATTGATTCAC-CGGCTTGGCTTG 379 | ||||| | || | || ||||||||||||||| |||||||||| | | ||||||| || Sbjct 281 TCCGGCCT-CATCCGACCTGTTTTCAGATGTCTTCAGATTGATTC-CTCAGCTTGGCATG 338 Query 380 GTCTCGAGCAAACAGCTTGCT-CTTCTCCGGCTAAGCACCACATCGGGGCGTTCA-CGAG 437 | || ||| | | | || ||| || ||| ||||||| | |||||||| ||||||| | || Sbjct 339 GCCTTGAGGAGATATCT-GCTTCTACTCAGGCTAAGGATCACATCGGTGCGTTCATCAAG 397 Query 438 GTTACTCTCAGAAGA----AGCGA--ATGATGCT--T-CT-GCCGAGATGGTGGAGCAAG 487 ||||||||||| || || || |||||| | | || | || ||||||||| ||| Sbjct 398 -TTACTCTCAGAGGATGTGAGTGATGATGATGATAATTCTAGT-GAAATGGTGGAGAAAG 455 Query 488 AGATGGCCTTAGCTAAAGCTGCTGATGCTATGGTGCATAGCATTC-AAT--GCTCTGTAT 544 ||| |||||||||||||||||||| |||||||| || | ||||| || ||||||||| Sbjct 456 AGACCGCCTTAGCTAAAGCTGCTGAAGCTATGGTTCAAAACATTCGAAGCAGCTCTGTAT 515 Query 545 CTATAGATGCTAAGAAGGAGAAGCATCAAGAATACGAAAACGAATGCCGTGAGAAATATG 604 || | || ||||||| |||||| ||| |||| ||||||||||||||||||||| ||| Sbjct 516 CTGTGGAAGCTAAGATGGAGAAACATGTGGAATTCGAAAACGAATGCCGTGAGAAGTATT 575 Query 605 CTGTTCCTGAGGTA 618 |||||| |||||| Sbjct 576 ATGTTCCCGAGGTA 589 > Ahg328137 jgi|Araly1|328137|fgenesh1_pm.C_scaffold_7000364 Length=396 Score = 514 bits (278), Expect = 1e-144 Identities = 329/353 (93%), Gaps = 5/353 (1%) Strand=Plus/Minus Query 4 TTTCTCGGGATTTCGAAATTTGACGGTGATCTGA-TTTCCAACGATTTTTTCTCTTCCAT 62 |||||||||||||||||||||||||||||||||| ||| |||||| |||||||| ||||| Sbjct 375 TTTCTCGGGATTTCGAAATTTGACGGTGATCTGACTTT-CAACGAATTTTTCTCCTCCAT 317 Query 63 GGCttt-ttttCGCTGATCGGTAAATCAAACGTTTGTTTCGGTTTCGATGGTGGAAGCTA 121 | ||| |||| |||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct 316 -GTTTTCTTTTGGCTGATCGGTAAATCAAACGTTCGTTTCGGGTTCGATGGTGGAAGCTA 258 Query 122 CGTCGAATTTGACGCCGACTCAGAGATATGCGGCCGGCGCATTGTTTGCGATCGCTTTGA 181 |||| ||||||||| |||| |||||||||||||||||||||||||| |||||||| | | Sbjct 257 CGTCTAATTTGACGTCGACGCAGAGATATGCGGCCGGCGCATTGTTCGCGATCGCGCTCA 198 Query 182 ACCAAGCGCAAATCAACCAGACTCAGCCGCTGGGAACCCCGGCGGCGGAAGACGACGACG 241 ||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||| Sbjct 197 ACCAAGCACAAATCAACCAGACTCAGCCGCTGGGAATCCCAGCGGCGGAAGACGACGACG 138 Query 242 GAGGCGATGAAGAGCGAAGAAGCAATTGCAGTAGCGGAGATTCTGTCTCCGATGACCCCA 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 137 GAGGCGATGAAGAGCGAAGAAGCAATTGCAGTAGCGGAGATTCTGTCTCCGATGACCCCA 78 Query 302 GCCTTTGGGTACACGAGACGTCTGGCCTTCTTCGCCCCGTTTTCAGATG-TCT 353 ||||||||||||||||||||||| |||||||||| ||||||||||| || ||| Sbjct 77 GCCTTTGGGTACACGAGACGTCTAGCCTTCTTCGACCCGTTTTCAGGTGATCT 25 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 93511551475 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5