BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT4G37640.1 Length=3426 Score E Sequences producing significant alignments: (Bits) Value Ahg490855 jgi|Araly1|490855|fgenesh2_kg.7__288__AT4G37640.1 5334 0.0 Ahg899595 jgi|Araly1|899595|Al_scaffold_0004_245 3166 0.0 > Ahg490855 jgi|Araly1|490855|fgenesh2_kg.7__288__AT4G37640.1 Length=3341 Score = 5334 bits (2888), Expect = 0.0 Identities = 3188/3331 (96%), Gaps = 27/3331 (1%) Strand=Plus/Plus Query 63 AAACAAAAAAGCCATTGAAGCTGGAAGACa-aaaaaaaCAGAGGAGATTGAAGAAGAAGA 121 ||| |||||||||||||||||||||||| | |||||||||||| |||||||||||| | | Sbjct 34 AAAAAAAAAAGCCATTGAAGCTGGAAGA-AGAAAAAAACAGAGAAGATTGAAGAAG-A-A 90 Query 122 GGGAGTAAGAAGATGGAGAGTTACCTAAACGAGAATTTCGATGTGAAAGCGAAGCATTCT 181 |||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct 91 -GGAGGAAGAAGATGGAGAGTTACCTAAACGAGAATTTCGATGTGAAGGCGAAACATTCT 149 Query 182 TCAGAGGAAGTGCTTGAGAAATGGCGTAATCTCTGTGGCGTTGTTAAGAACCCTAAACGT 241 |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct 150 TCAGAGGAAGTGCTTGAGAAATGGCGTAATCTCTGTAGCGTTGTCAAGAACCCTAAACGT 209 Query 242 CGGTTTCGTTTCACCGCTAATCTCTCTAAACGCTATGAAGCCGCCGCGATGCGTCGCACC 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 210 CGGTTTCGTTTCACCGCTAATCTCTCTAAACGCTATGAAGCCGCCGCGATGCGTCGCACC 269 Query 302 AACCAGGAGAAATTAAGGATCGCTGTTCTTGTTTCCAAAGCTGCTTTCCAATTTATCTCT 361 ||||||||||||||||||||||||||||| || || |||||||||||||||||||||||| Sbjct 270 AACCAGGAGAAATTAAGGATCGCTGTTCTCGTGTCTAAAGCTGCTTTCCAATTTATCTCT 329 Query 362 GGTGTTTCTCCAAGTGACTACACTGTCCCTGAAGATGTCAAAGCTGCTGGCTTTGAGATT 421 |||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 330 GGTGTTGCTCCAAGTGACTACACTGTACCTGAAGAAGTCAAAGCTGCTGGCTTTGAGATT 389 Query 422 TGTGCTGACGAATTAGGATCAATTGTTGAAAGTCATGATGTTAAGAAGCTCAAGTTCCAT 481 |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct 390 TGTGCTGACGAATTGGGATCAATTGTTGAGAGTCATGATGTTAAGAAGCTCAAGTTCCAT 449 Query 482 GGTGGAGTTGATGGGCTTGCAGGTAAGCTCAAGGCATCTCCCACAGATGGCCTTTCTACT 541 ||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||| ||| Sbjct 450 GGTGGAGTTGATGGGCTTGCAGGTAAGCTCAAGGCTTCTCCTACAGATGGGCTTTCGACT 509 Query 542 GAGGCTGCTCAGTTATCCCAAAGGCAAGAGCTTTTCGGAATCAACAAGTTTGCAGAGAGC 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 510 GAGGCTGCTCAGTTATCCCAAAGGCAAGAGCTTTTCGGAATCAACAAGTTTGCAGAGAGC 569 Query 602 GAAATGAGGGGTTTCTGGGTGTTTGTATGGGAAGCTCTTCAGGATATGACTCTTATGATT 661 |||||| | ||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct 570 GAAATGCGCGGTTTCTGGGTGTTTGTTTGGGAAGCTCTTCAAGATATGACTCTTATGATT 629 Query 662 CTTGGTGTTTGTGCTTTCGTGTCTTTGATTGTTGGGATAGCTACTGAAGGATGGCCTAAA 721 ||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct 630 CTTGGTGTTTGCGCTTTCGTGTCTTTGATCGTTGGGATTGCTACTGAAGGATGGCCTAAA 689 Query 722 GGATCACATGATGGTCTTGGCATTGCGGCTAGTATTCTCTTGGTTGTGTTTGTTACAGCT 781 || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 690 GGGTCACATGATGGTCTTGGCATTGTGGCTAGTATTCTCTTGGTTGTGTTTGTTACAGCT 749 Query 782 ACTAGCGATTACCGCCAGTCTTTGCAGTTCCGTGATTTGGATAAAGAGAAGAAGAAGATC 841 ||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct 750 ACTAGCGATTATCGCCAGTCTTTGCAGTTCCGGGATTTGGATAAGGAGAAGAAGAAGATC 809 Query 842 ACTGTTCAGGTGACAAGGAACGGGTTTAGACAGAAACTGTCGATTTACGACTTGCTTCCT 901 |||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||| Sbjct 810 ACTGTTCAGGTGACGAGGAACGGGTTTAGACAGAAACTGTCGATATATGACTTGCTTCCC 869 Query 902 GGTGACATTGTTCATCTGGCGATTGGAGATCAGGTTCCTGCTGATGGTCTTTTCCTCTCG 961 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 870 GGTGACATTGTTCATCTGGCGATTGGAGATCAGGTTCCTGCTGATGGTCTTTTCCTCTCC 929 Query 962 GGATTCTCTGTGGTGATAGATGAATCGAGTTTGACTGGTGAAAGTGAGCCTGTGATGGTG 1021 |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 930 GGATTCTCCGTGGTGATAGATGAATCGAGTTTGACTGGCGAAAGTGAGCCTGTGATGGTG 989 Query 1022 AATGCGCAGAATCCTTTCCTTATGTCTGGAACCAAAGTGCAAGATGGATCTTGTAAGATG 1081 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 990 AATGCGCAGAATCCTTTCCTTATGTCTGGAACCAAAGTGCAAGATGGATCTTGTAAGATG 1049 Query 1082 ATGATTACTACAGTTGGGATGAGGACTCAATGGGGAAAGCTAATGGCGACTTTGACCGAA 1141 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1050 ATGATTACTACAGTTGGGATGAGGACTCAATGGGGAAAGCTAATGGCGACTTTGACTGAA 1109 Query 1142 GGAGGGGATGATGAAACTCCACTGCAGGTGAAACTCAATGGAGTTGCTACCATCATTGGC 1201 ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1110 GGAGGGGATGACGAAACTCCTTTGCAGGTGAAACTCAATGGAGTTGCTACCATCATTGGC 1169 Query 1202 AAAATTGGTCTTTTCTTTGCGGTGGTTACTTTCGCGGTTCTGGTGCAAGGAATGTTTATG 1261 ||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||| Sbjct 1170 AAAATTGGTCTTTTCTTTGCGGTTGTTACTTTCGCAGTTTTGGTGCAAGGAATGTTTATG 1229 Query 1262 AGGAAGCTTTCAACGGGAACTCACTGGGTCTGGTCTGGTGATGAAGCATTGGAGCTCTTG 1321 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1230 AGGAAGCTTTCAACGGGAACTCACTGGATCTGGTCTGGTGATGAAGCATTGGAGCTCTTG 1289 Query 1322 GAATACTTTGCTATTGCTGTGACAATCGTTGTGGTTGCGGTTCCTGAAGGATTGCCTTTA 1381 ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct 1290 GAATACTTTGCTATTGCCGTGACAATCGTTGTGGTTGCGGTTCCTGAGGGATTGCCTTTA 1349 Query 1382 GCTGTGACTCTAAGTCTTGCGTTTGCCATGAAGAAAATGATGAACGATAAAGCTCTTGTG 1441 ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1350 GCTGTGACTCTTAGTCTTGCGTTTGCGATGAAGAAAATGATGAACGATAAAGCTCTTGTC 1409 Query 1442 AGGCATTTAGCAGCATGTGAGACTATGGGATCTGCAACGACGATTTGCAGTGACAAGACT 1501 | |||||||||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct 1410 CGACATTTAGCAGCATGTGAGACTATGGGATCTGCGACAACGATTTGCAGTGACAAGACC 1469 Query 1502 GGTACACTCACAACCAATCACATGACCGTTGTGAAGTCTTGCATTTGCATGAATGTGCAA 1561 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1470 GGTACACTCACAACCAATCACATGACCGTTGTGAAGTCTTGCATTTGCATGAACGTGCAA 1529 Query 1562 GATGTAGCAAATAAAGGTTCTAGCTTGCAATCAGAAATCCCGGAATCTGCGGTGAAGTTG 1621 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1530 GATGTAGCAAATAAAGGTTCTAGCTTGCAATCAGAAATCCCGGAATCTGCTGTGAAGTTG 1589 Query 1622 TTGATTCA-ATCGATTTTCAATAACACAGGAGGCGAAGTTGTTGTCAACAAACATGGGAA 1680 |||||||| | |||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct 1590 TTGATTCAGA-CGATTTTCAATAACACGGGAGGCGAAGTTGTTGTCAACAAACACGGGAA 1648 Query 1681 AACCGAGCTTTTGGGGACGCCAACAGAGACTGCTATATTAGAGTTGGGGTTATCTCTTGG 1740 |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct 1649 AACCGAGCTTTTGGGGACGCCAACAGAGACAGCTATATTAGAGTTTGGGTTATCTCTTGG 1708 Query 1741 AGGTAAGTTCCAAGAAGAGAGGAAGTCTTACAAAGTGATCAAAGTTGAGCCTTTCAACTC 1800 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1709 AGGTAAGTTCCAAGAAGAGAGGAAGTCTTACAAAGTGATCAAAGTTGAGCCTTTCAACTC 1768 Query 1801 CACAAAGAAGCGAATGGGAGTTGTAATCGAGCTTCCTGAGGGAGGACGTATGCGTGCTCA 1860 |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| Sbjct 1769 CACAAAGAAGCGAATGGGAGTTGTAATCGAGCTTCCTGAGGGAGGAAGTCTGCGTGCTCA 1828 Query 1861 CACGAAAGGAGCTTCCGAGATTGTTTTAGCTGCTTGTGACAAAGTTGTAAACTCGAGCGG 1920 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct 1829 CACGAAAGGAGCTTCCGAGATAGTTTTAGCTGCTTGTGATAAAGTTGTAAACTCGAGCGG 1888 Query 1921 TGAGGTTGTTCCACTTGATGAAGAATCAATCAAGTATCTGAATGTTACAATCAACGAGTT 1980 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1889 TGAAGTTGTTCCACTTGATGAAGAATCAATCAAGTATCTGAATGTTACCATCAACGAGTT 1948 Query 1981 TGCTAATGAAGCTCTTCGAACTCTTTGCCTTGCTTATATGGATATTGAAGGCGGGTTTTC 2040 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1949 TGCTAATGAAGCTCTTCGAACTCTTTGCCTTGCTTATATGGATATTGAAGGCGGGTTTTC 2008 Query 2041 GCCGGATGATGCAATCCCGGCTTCTGGATTTACTTGCGTAGGGATTGTGGGAATCAAAGA 2100 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 2009 GCCGGATGATGCAATCCCGGCTTCTGGATTTACTTGCGTAGGGATTGTGGGGATCAAAGA 2068 Query 2101 TCCCGTACGTCCTGGAGTTAAAGAATCTGTTGAGCTTTGTCGCCGTGCTGGAATCACTGT 2160 ||| || ||||||||||| |||||||| |||||||||||||| ||||||||||||||||| Sbjct 2069 TCCTGTTCGTCCTGGAGTCAAAGAATCCGTTGAGCTTTGTCGTCGTGCTGGAATCACTGT 2128 Query 2161 GAGGATGGTTACAGGAGATAACATTAACACCGCGAAAGCAATTGCTAGAGAATGTGGGAT 2220 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2129 GAGAATGGTTACAGGAGATAACATTAACACCGCGAAAGCAATTGCTAGAGAATGTGGGAT 2188 Query 2221 TTTAACTGATGACGGTATAGCCATCGAAGGTCCCGTATTCAGAGAGAAGAATCAAGAAGA 2280 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 2189 TTTAACTGATGACGGTATAGCCATCGAGGGTCCCGTATTCAGAGAGAAGAATCAAGAAGA 2248 Query 2281 GTTACTAGAACTGATTCCAAAGATTCAGGTGATGGCTCGTTCTTCACCAATGGATAAGCA 2340 |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| || Sbjct 2249 GTTACTAGAACTGATTCCAAAGATTCAGGTGATGGCCCGTTCTTCGCCAATGGATAAACA 2308 Query 2341 TACACTTGTGAAACAGTTAAGGACAACGTTTGATGAAGTTGTTGCTGTCACTGGAGATGG 2400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2309 TACACTTGTGAAACAGTTAAGGACAACGTTTGATGAAGTTGTTGCTGTCACTGGAGATGG 2368 Query 2401 AACAAATGATGCACCTGCACTTCATGAAGCTGATATTGGACTAGCAATGGGAATTGCTGG 2460 |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct 2369 AACAAATGATGCACCTGCACTTCATGAAGCTGATATCGGACTAGCTATGGGAATTGCTGG 2428 Query 2461 AACTGAAGTGGCGAAAGAGAGCGCTGATGTCATCATTCTCGACGATAACTTCAGCACGAT 2520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2429 AACTGAAGTGGCGAAAGAGAGCGCTGATGTCATCATTCTCGACGATAACTTCAGCACGAT 2488 Query 2521 CGTCACAGTTGCTAAATGGGGACGTTCTGTTTACATAAACATCCAGAAATTCGTTCAGTT 2580 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 2489 CGTCACAGTTGCTAAATGGGGACGTTCTGTTTACATAAACATACAGAAATTCGTTCAGTT 2548 Query 2581 TCAGCTTACCGTTAATGTTGTTGCACTGGTTGTTAACTTCTCTTCAGCTTGTTTAACCGG 2640 ||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct 2549 TCAGCTTACGGTTAATGTTGTTGCTCTGGTTGTTAACTTCTCTTCAGCTTGCTTAACCGG 2608 Query 2641 AAGTGCTCCTTTAACTGCTGTTCAATTGTTGTGGGTGAACATGATCATGGACACACTTGG 2700 |||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||| Sbjct 2609 AAGTGCTCCTTTAACTGCTGTTCAGTTGCTATGGGTGAACATGATCATGGACACACTTGG 2668 Query 2701 AGCTCTTGCTTTAGCTACAGAGCCACCAAACGACGAGCTGATGAAGCGTTTACCTGTTGG 2760 |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct 2669 AGCTCTTGCTTTAGCTACAGAGCCACCAAATGACGAGCTGATGAAGCGTTTACCCGTTGG 2728 Query 2761 AAGGAGAGGCAATTTCATCACTAATGCGATGTGGAGGAACATTTTAGGACAAGCTGTTTA 2820 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2729 AAGGAGAGGGAATTTCATCACTAATGCGATGTGGAGGAACATTTTAGGACAAGCTGTTTA 2788 Query 2821 CCAATTCATCGTAATTTGGATTCTCCAAGCCAAAGGGAAGGCTATGTTTGGTCTCGACGG 2880 ||||||||||| ||||||||||||||||||||||||||| ||||||||||||| || || Sbjct 2789 TCAATTCATCGTCATTTGGATTCTCCAAGCCAAAGGGAAGTCTATGTTTGGTCTTGAAGG 2848 Query 2881 TCCTGACTCAACTCTCATGTTAAACACTCTTATCTTCAACTGCTTCGTCTTCTGTCAGGT 2940 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2849 CCCTGACTCAACTCTCATGTTAAACACTCTTATCTTCAACTGCTTCGTCTTCTGTCAGGT 2908 Query 2941 GTTTAACGAGATAAGCTCGCGAGAGATGGAAGAGATCGATGTTTTCAAAGGAATACTGGA 3000 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 2909 GTTTAACGAGATAAGCTCGCGAGAGATGGAAGAGATCGATGTTTTCAAGGGAATACTGGA 2968 Query 3001 CAATTACGTCTTTGTGGTTGTGATCGGTGCAACGGTTTTCTTTCAGATCATAATCATCGA 3060 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 2969 CAATTACGTCTTTGTGGTTGTGATCGGTGCAACGGTTTTCTTTCAGATCATAATCATTGA 3028 Query 3061 GTTCTTGGGCA-CATTTGCAAGCACAACACCACTCACAATAACACAATGGATCTTCAGTA 3119 ||||||||| | | |||||||||||||||||||||||| | || |||||||||||||||| Sbjct 3029 GTTCTTGGG-ATCTTTTGCAAGCACAACACCACTCACATTGACCCAATGGATCTTCAGTA 3087 Query 3120 TCTTCATAGGTTTCTTGGGTATGCCAATCGCCGCTGGACTGAAGACGATTCCCGTTTGAT 3179 || || ||||||||||||||||||||||||| || ||| ||||||||||||||||||||| Sbjct 3088 TCGTCGTAGGTTTCTTGGGTATGCCAATCGCTGCAGGATTGAAGACGATTCCCGTTTGAT 3147 Query 3180 CGTTCCATCAAAATTGGCTCGAAACCACTCTTTAAAGATCTCTATATTAGACCAGTTACT 3239 || |||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct 3148 CGATCCATCGAAATTGGCGCGAAACCTCTCTTTAAAGATCTCTATATTAGACCAGTTACT 3207 Query 3240 TCAAAGTTT-AGAACGGACAAGTCTTCTAACAAAGTTTTTGCATTATGCAATGACTCTGT 3298 |||| |||| |||||||||||||||||||||||||||||||| || |||||||||||||| Sbjct 3208 TCAA-GTTTTAGAACGGACAAGTCTTCTAACAAAGTTTTTGCCTTTTGCAATGACTCTGT 3266 Query 3299 TTTTTATTCTTGACTTTTATTTTTCAGTTTGATTAGTGCTATTAAGGACAAATATCTGAT 3358 ||||| || || | | |||||||||| ||||||||||||||||||||||| Sbjct 3267 TTTTT-TT-TT--C----A-------GTTTGATTAGGGCTATTAAGGACAAATATCTGAT 3311 Query 3359 TTCCTCCATTTTTGTAAAACTCTCTGTATCT 3389 ||| ||||||||||||||||||||||| ||| Sbjct 3312 TTC-TCCATTTTTGTAAAACTCTCTGTTTCT 3341 > Ahg899595 jgi|Araly1|899595|Al_scaffold_0004_245 Length=3048 Score = 3166 bits (1714), Expect = 0.0 Identities = 2626/3070 (86%), Gaps = 47/3070 (2%) Strand=Plus/Plus Query 134 ATGGAGAGTTACCTAAAC-GAGAATTTCGATGTGAAAGCGAAGCATTCTTCAGAGGAAGT 192 |||||||||||||| ||| | |||||||| || || ||||||||||| ||||||||||| Sbjct 1 ATGGAGAGTTACCTCAACTCA-AATTTCGACGTTAAGGCGAAGCATTCGTCAGAGGAAGT 59 Query 193 GCTTGAGAAATGGCGTAATCTCTGTGGCGTTGTTAAGAACCCTAAACGTCGGTTTCGTTT 252 ||||| |||||||| ||||| || | || || || ||||| |||||||||||||| || Sbjct 60 TCTTGAAAAATGGCGGAATCTTTGCAGTGTCGTCAAAAACCCGAAACGTCGGTTTCGCTT 119 Query 253 CACCGCTAATCTCTCTAAACGCTATGAAGCCGCCGCGATGCGTCGCACCAACCAGGAGAA 312 ||| || |||||||| || || || ||||| || || ||||| ||||||||||| || || Sbjct 120 CACTGCCAATCTCTCCAAGCGTTACGAAGCTGCTGCCATGCGACGCACCAACCAAGAAAA 179 Query 313 ATTAAGGATCGCTGTTCTTGTTTCCAAAGCTGCTTTCCAATTTATCTCTGGTGTTTCTCC 372 ||||||||| || |||||||| || ||||| || |||||||| ||||||||||||||||| Sbjct 180 ATTAAGGATTGCAGTTCTTGTGTCAAAAGCCGCATTCCAATTCATCTCTGGTGTTTCTCC 239 Query 373 AAGTGACTACACTGTCCCTGAAGATGTCAAAGCTGCTGGCTTTGAGATTTGTGCTGACGA 432 ||||||||| | || |||||||| || ||||| || |||||||| |||||||| || || Sbjct 240 AAGTGACTATAAGGTGCCTGAAGAAGTTAAAGCAGCAGGCTTTGACATTTGTGCAGATGA 299 Query 433 ATTAGGATCAATTGTTGAAAGTCATGATGTTAAGAAGCTCAAGTTCCATGGTGGAGTTGA 492 ||||||||||| || ||| |||||||||| ||||||||||||||||||||||| ||||| Sbjct 300 GTTAGGATCAATAGTGGAAGGTCATGATGTGAAGAAGCTCAAGTTCCATGGTGGTGTTGA 359 Query 493 TGGGCTTGCAGGTAAGCTCAAGGCATCTCCCACA-GATGGCCTTTCTACTGAGG---CTG 548 ||| ||| |||||||||| ||||||| ||||| | | ||| || || || | || ||| Sbjct 360 TGGTCTTTCAGGTAAGCTTAAGGCATGTCCCA-ATGCTGGTCTCTCAACAGGGGAACCTG 418 Query 549 -CTCAGTTATCCCAAA-GGCAAGAGCTTTTCGGAATCAACAAGTTTGCAGAGAGCGAAAT 606 | |||||| |||| | |||||||||||||||||||| |||||||| ||||| | ||| Sbjct 419 AC-CAGTTA-AACAAACGACAAGAGCTTTTCGGAATCAATAAGTTTGCGGAGAGTG-AAT 475 Query 607 GA-GGGGTTTCTGGGTGTTTGTATGGGAAGCTCTTCAGGATATGACTCTTATGATTCTTG 665 | || |||| ||||||||||| |||||||| ||||| |||||||||||||||||||||| Sbjct 476 TACGGAGTTTTTGGGTGTTTGTTTGGGAAGCACTTCAAGATATGACTCTTATGATTCTTG 535 Query 666 GTGTTTGTGCTTTCGTGTCTTTGATTGTTGGGATAGCTACTGAAGGATGGCCTAAAGGAT 725 ||||||| |||||||| |||||||| ||||| || || |||||||||||||| |||| | Sbjct 536 GTGTTTGCGCTTTCGTTTCTTTGATAGTTGGAATTGCAACTGAAGGATGGCCCCAAGGGT 595 Query 726 CACATGATGGTCTTGGCATTGCGGCTAGTATTCTCTTGGTTGTGTTTGTTACAGCTACTA 785 ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||| Sbjct 596 CACATGATGGTCTTGGCATTGTTGCTAGTATTCTTTTGGTTGTGTTTGTGACAGCTACTA 655 Query 786 GCGATTACCGCCAGTCTTTGCAGTTCCGTGATTTGGATAAAGAGAAGAAGAAGATCACTG 845 ||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||| | Sbjct 656 GCGATTATCGCCAGTCTTTGCAGTTCCGGGATTTGGATAAGGAGAAGAAGAAGATCACGG 715 Query 846 TTCAGGTGACAAGGAACGGGTTTAGACAGAA-ACTGTCGATTTACGACTTGCTTCCTGGT 904 |||| || || | ||||||||||||||||| | |||| || || || ||||| |||||| Sbjct 716 TTCAAGTTACGCGAAACGGGTTTAGACAGAAGA-TGTCTATATATGATTTGCTCCCTGGT 774 Query 905 GACATTGTTCATCTGGCGATTGGAGATCAGGTTCCTGCTGATGGTCTTTTCCTCTCGGGA 964 || |||||||||| || ||||||||||| ||||| || ||||||||||||||||||||| Sbjct 775 GATGTTGTTCATCTTGCTATTGGAGATCAAGTTCCCGCGGATGGTCTTTTCCTCTCGGGA 834 Query 965 TTCTCTGTGGTGATAGATGAATCGAGTTTGACTGGTGAAAGTGAGCCTGTGATGGTGAAT 1024 |||||||| || || |||||||||||||| |||||||| ||||||||||||||||||| | Sbjct 835 TTCTCTGTTGTTATCGATGAATCGAGTTTAACTGGTGAGAGTGAGCCTGTGATGGTGACT 894 Query 1025 GCGCAGAATCCTTTCCTTATGTCTGGAACCAAAGTGCAAGATGGATCTTGTAAGATGATG 1084 || || || ||||| ||| | |||||||||||||| |||||||| |||||||||||| || Sbjct 895 GCACAAAACCCTTTTCTTCTCTCTGGAACCAAAGTTCAAGATGGGTCTTGTAAGATGCTG 954 Query 1085 ATTACTACAGTTGGGATGAGGACTCAATGGGGAAAGCTAATGGCGAC-TTTGACCGAAGG 1143 |||| |||||||||||||| ||||||||||||||| ||||||| || || | ||||| Sbjct 955 GTTACAACAGTTGGGATGAGAACTCAATGGGGAAAGTTAATGGCAACACTT-AGTGAAGG 1013 Query 1144 AGGGGATGATGAAACTCCACTGCAGGTGAAACTCAATGGAGTTGCTACCATCATTGGCAA 1203 ||| ||||| |||||||| |||| |||||||| ||||||||||| ||||||||||| || Sbjct 1014 AGGCGATGACGAAACTCCGTTGCAAGTGAAACTTAATGGAGTTGCAACCATCATTGGAAA 1073 Query 1204 AATTGGTCTTTTCTTTGCGGTGGTTA-CTTTCGCGGTTCTGGTGCAAGGAATGTTTATGA 1262 ||| ||||||||||| || | |||| |||| |||||| ||||||||||||||||||||| Sbjct 1074 AATCGGTCTTTTCTTCGCTATTGTTACCTTT-GCGGTTTTGGTGCAAGGAATGTTTATGA 1132 Query 1263 GGAAGCTTTCAACGGGAACTCACTGGGT-CTGGTCTGGTGATGAAGCATTGGAGCTCTTG 1321 ||||||||||| ||||||||| | ||| |||||||| ||||| ||||||||||| ||| Sbjct 1133 GGAAGCTTTCATTGGGAACTCA-TTGGTGGTGGTCTGGAGATGATGCATTGGAGCTTTTG 1191 Query 1322 GAATACTTTGCTATTGCTGTGACAATCGTTGTGGTTGCGGTTCCTGAAGGATTGCCTTTA 1381 || || |||||||||||||| ||||| ||||| || |||||||||||||| || || ||| Sbjct 1192 GAGTATTTTGCTATTGCTGTCACAATTGTTGTCGTCGCGGTTCCTGAAGGTTTACCATTA 1251 Query 1382 GCTGTGACTCTAAGTCTTGCGTTTGCCATGAAGAAAATGATGAACGATAAAGCTCTTGTG 1441 ||||| ||||| ||||| || ||||| |||||||| ||||||||||||||||| ||||| Sbjct 1252 GCTGTCACTCTTAGTCTCGCCTTTGCGATGAAGAAGATGATGAACGATAAAGCGCTTGTT 1311 Query 1442 AGGCATTTAGCAGCATGTGAGACTATGGGATCTGCAACGACGATTTGCAGTGACAAGACT 1501 | ||||| ||||| ||||| || |||||||||||||| || ||||| |||||||||||| Sbjct 1312 CGTCATTTGGCAGCTTGTGAAACAATGGGATCTGCAACTACTATTTGTAGTGACAAGACT 1371 Query 1502 GGTACACTCACAACCAATCACATGACCGTTGTGAAGTCTTGCATTTGCATGAATGTGCAA 1561 |||||| | ||||| ||||||||||| |||||||| ||||||||||| |||||||| ||| Sbjct 1372 GGTACATTAACAACAAATCACATGACTGTTGTGAAATCTTGCATTTGTATGAATGTTCAA 1431 Query 1562 GATGTAGCAAATAAAGGTTCTAGCTTGCAATCAGAAATCCCGGAA-TCTGCGGTG-AAGT 1619 |||||||| | |||||||| || || || || ||||| || ||| | ||| || || | Sbjct 1432 GATGTAGCTAGCAAAGGTTCAAGTTTACAGTCTGAAATACCTGAAGT-TGCTTTGAAACT 1490 Query 1620 TGTTGATTCAATCGATTTTCAATAACACAGGAGGCGAAGTTGTTGTCAACAAACATGGGA 1679 || | ||||||||||| ||||| || || |||||||||||||| ||| ||| ||| | Sbjct 1491 ACTT-CTCCAATCGATTTTTAATAATACCGGTGGCGAAGTTGTTGTGAACGAACGTGGCA 1549 Query 1680 AAACCGAGCTTTTGGGGACGCCAACAGAGACTGCTATATTAGAGTTGGGGTTATCTCTTG 1739 | || ||| | |||||||| ||||||||||| |||||||||||||| ||||||||||||| Sbjct 1550 AGACTGAGATATTGGGGACACCAACAGAGACAGCTATATTAGAGTTTGGGTTATCTCTTG 1609 Query 1740 GAGGTAAGTTCCAAGAAGAGAGG-AAGTCTTACAAAGTGATCAAAGTTGAGCCTTTCAAC 1798 |||||||||||||||||||||| || ||||||||||| ||||||||||||||||| ||| Sbjct 1610 GAGGTAAGTTCCAAGAAGAGAGACAA-TCTTACAAAGTTATCAAAGTTGAGCCTTTTAAC 1668 Query 1799 TCCACAAAGAAGCGAATGGGAGTTGTAATCGAGCTTCCTGAGGGAGGACGTATGCGTGCT 1858 |||||||||||| |||||||||| || || ||||| ||||| |||||||| || |||||| Sbjct 1669 TCCACAAAGAAGAGAATGGGAGTAGTGATTGAGCTGCCTGAAGGAGGACGCATTCGTGCT 1728 Query 1859 CACACGAAAGGAGCTTCCGAGATTGTTTTAGCTGCTTGTGACAAAGTTGTAAACTCGAGC 1918 ||||||||||||||||| ||||| |||||||| ||||| || ||||| | ||||| ||| Sbjct 1729 CACACGAAAGGAGCTTCAGAGATAGTTTTAGCGGCTTGCGATAAAGTCATCAACTCAAGC 1788 Query 1919 GGTGAGGTTGTTCCACTTGATGAAGAATCAATCAAGTATCT-GAATGTTACAATCAACGA 1977 ||||| |||||||| |||||||| ||||| ||||||| ||| |||||| |||||| | || Sbjct 1789 GGTGAAGTTGTTCCGCTTGATGACGAATCTATCAAGT-TCTTGAATGTCACAATCGATGA 1847 Query 1978 GTTTGCTAATGAAGCTCTTCGAACTCTTTGCCTTGCTTATATGGATATTGAAGGCGGGTT 2037 |||||| |||||||||||||| || ||||||||||||||||||||||| ||| ||||| Sbjct 1848 GTTTGCAAATGAAGCTCTTCGTACACTTTGCCTTGCTTATATGGATATCGAAAATGGGTT 1907 Query 2038 TTC-GCCGGATGATGCAATCCCGGCTTCTGGATTTACTTGCGTAGGGATTGTGGGAATCA 2096 ||| || |||||| | || |||||| || ||||||||| |||||||||| || |||| Sbjct 1908 TTCTGC-GGATGAAGGTATTCCGGCTAGAGGGTTTACTTGCATAGGGATTGTTGGTATCA 1966 Query 2097 AAGATCCC-GTACGTCCTGGAGTTAAAGAA-TCTGTTGAGCTTTGTCGCCGTGCTGGAAT 2154 |||| ||| |||||||||||||||| ||| || || || ||||||||||| || || || Sbjct 1967 AAGA-CCCTGTACGTCCTGGAGTTAG-GAAGTCCGTGGAACTTTGTCGCCGAGCAGGTAT 2024 Query 2155 CACTG-TGAGGATGGTTACAGGAGATAACATTAACACCGCGAAAG-CAATTGCTAGAGAA 2212 | || |||| ||||||||||||||||||||||||||||| |||| | |||||||||||| Sbjct 2025 TA-TGGTGAGAATGGTTACAGGAGATAACATTAACACCGC-AAAGGCTATTGCTAGAGAA 2082 Query 2213 TGTGGGATTTTAACTGATGACGGTATAGCCATCGAAGGTCCCGTATTCAGAGAGAAGAAT 2272 ||||| ||| | |||||||| |||||||| || |||||||| || || |||||||||||| Sbjct 2083 TGTGGAATTCTCACTGATGATGGTATAGCAATTGAAGGTCCTGTGTTTAGAGAGAAGAAT 2142 Query 2273 CAAGAAGAGTTACTAGAACTGATTCCAAAGATTCAGGTGATGGCTCGTTCTTCACCAATG 2332 ||||||||| | || ||||| ||||| |||||||||||||||||||||||||| || ||| Sbjct 2143 CAAGAAGAGATGCTGGAACTCATTCCCAAGATTCAGGTGATGGCTCGTTCTTCGCCTATG 2202 Query 2333 GATAAGCATACACTTGTGAAACAGTTAAGGACAACGTTTGATGAAGTTGTTGCTGTCACT 2392 || ||||||||||| ||||| ||||||||||| || ||||||||||||||||| || ||| Sbjct 2203 GACAAGCATACACTGGTGAAGCAGTTAAGGACCACTTTTGATGAAGTTGTTGCCGTGACT 2262 Query 2393 GGAGATGGAACAAATGATGCACCTGCACTTCATGAAGCTGATATTGGACTAGCAATGGGA 2452 || || || ||||| |||||||| ||||| || || ||||| || ||| |||||||||| Sbjct 2263 GGTGACGGGACAAACGATGCACCAGCACTCCACGAGGCTGACATAGGATTAGCAATGGGC 2322 Query 2453 ATTGCTGGAACTGAAGTGGCGAAAGAGAGCGCTGATGTCATCATTCTCGACGATAACTTC 2512 ||||| ||||| ||||| |||||||||||||| ||||||||||||||||||||||| ||| Sbjct 2323 ATTGCCGGAACAGAAGTAGCGAAAGAGAGCGCGGATGTCATCATTCTCGACGATAATTTC 2382 Query 2513 AGCACGATCGTCACAGTTGCTAAATGGGGACGTTCTGTTTACATAAACATCCAGAAATTC 2572 ||||| ||||||||||| || ||||||||||||||||||||||| ||||| |||||||| Sbjct 2383 AGCACAATCGTCACAGTAGCGAAATGGGGACGTTCTGTTTACATTAACATACAGAAATTT 2442 Query 2573 GTTCAGTTTCAGCTTACCGTTAATGTTGTTGCACTGGTTGTTAACTTCTCTTCAGCTTGT 2632 || ||||||||||| || || ||||||||||| || |||||||||||||||||||||| Sbjct 2443 GTGCAGTTTCAGCTAACAGTCAATGTTGTTGCCCTCATTGTTAACTTCTCTTCAGCTTGC 2502 Query 2633 TTAACCGGAAGTGCTCCTTTAACTGCTGTTCAATTG-TTGTGGGTGAACATGATCATGGA 2691 || || ||||||||||| |||||||||| ||| || || ||||| |||||||| ||||| Sbjct 2503 TTGACTGGAAGTGCTCCCCTAACTGCTGTGCAACTGCTT-TGGGTCAACATGATAATGGA 2561 Query 2692 CACACTTGGAGCTCTTGCTTTAGCTACAGAGCCACCAAACGACGAGCTGATGAAGCGTTT 2751 ||||||||||||||||||| |||||||||| || || ||| ||||||||||||| ||| | Sbjct 2562 CACACTTGGAGCTCTTGCTCTAGCTACAGAACCTCCGAACAACGAGCTGATGAAACGTAT 2621 Query 2752 ACCTGTTGGAAGGAGAGGCAATTTCATCACTAATGCGATGTGGAGGAACATTTTAGGACA 2811 ||||||||||||||||| |||||||| || |||||||||||||||||||| |||||||| Sbjct 2622 GCCTGTTGGAAGGAGAGGGAATTTCATTACCAATGCGATGTGGAGGAACATCTTAGGACA 2681 Query 2812 AGCTGTTTACCAATTCATCGTAATTTGGATTCTCCAAGCCAAAGGGAAGGCTATGTTTGG 2871 |||||| || |||||||| | ||||||||||| || |||||||||||| | |||||||| Sbjct 2682 AGCTGTGTATCAATTCATTATCATTTGGATTCTTCAGGCCAAAGGGAAGTCCATGTTTGG 2741 Query 2872 TCTCGACGGTCCTGACTCAACTCTCATGTTAAACACTCTTATCTTCAACTGCTTCGTCTT 2931 ||| | ||| ||||||| ||||| | |||||||| ||||||||||||||||| ||||| Sbjct 2742 TCTTGTTGGTTCTGACTCTACTCTTGTATTAAACACACTTATCTTCAACTGCTTTGTCTT 2801 Query 2932 CTGTCAGGTGTTT-AACGA-GATAAGCTCGCGAGAGATGGAAGAGATCGATGTTTTCAAA 2989 ||||||||| ||| || || | ||||||| | ||||||||||||||||||||||| ||| Sbjct 2802 CTGTCAGGT-TTTCAATGAAG-TAAGCTCAAGGGAGATGGAAGAGATCGATGTTTTAAAA 2859 Query 2990 GGAATACTGGACAATTACGTCTTTGTGGTTGTGATCGGTGCAACGGTTTTCTTTCAGATC 3049 || ||||| ||||| || |||||||||||||| || |||||||||||||||||||||||| Sbjct 2860 GGCATACTCGACAACTATGTCTTTGTGGTTGTTATTGGTGCAACGGTTTTCTTTCAGATC 2919 Query 3050 ATAATCATCGAGTTCTTGGGCACATTTGCAAGCACAACACCACTCACAATAACACAATGG 3109 |||||||| |||||||||||||||||||||||||||||||| || |||||| |||||| Sbjct 2920 ATAATCATTGAGTTCTTGGGCACATTTGCAAGCACAACACCTCTTACAATAGTTCAATGG 2979 Query 3110 ATCTTCAGTATCTTCATAGGTTTCTTGGGTATGCCAATCGCCGCTGGACT-GAAGACGAT 3168 ||||||| || || | || |||||||||||||| ||||| ||||| || ||||| || Sbjct 2980 TTCTTCAGCATATTTGTTGGCTTCTTGGGTATGCCGATCGCTGCTGG-CTTGAAGAAAAT 3038 Query 3169 TCCCGTTTGA 3178 ||||| ||| Sbjct 3039 ACCCGTGTGA 3048 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 129357690627 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5